Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00630.t1 | XP_003592976.1 | 99.8 | 583 | 1 | 0 | 1 | 583 | 1 | 583 | 5.50E-297 | 1029.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00630.t1 | Q940G0 | 85.8 | 577 | 82 | 0 | 7 | 583 | 13 | 589 | 7.3e-266 | 917.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00630.t1 | G7INP9 | 99.8 | 583 | 1 | 0 | 1 | 583 | 1 | 583 | 4.0e-297 | 1029.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene023251 | MS.gene00630 | PPI |
MS.gene00630 | MS.gene028206 | PPI |
MS.gene00630 | MS.gene08367 | PPI |
MS.gene34981 | MS.gene00630 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00630.t1 | MTR_2g006300 | 99.828 | 583 | 1 | 0 | 1 | 583 | 1 | 583 | 0.0 | 1195 |
MS.gene00630.t1 | MTR_8g088730 | 90.877 | 570 | 50 | 1 | 16 | 583 | 20 | 589 | 0.0 | 1016 |
MS.gene00630.t1 | MTR_5g077170 | 41.768 | 577 | 318 | 8 | 18 | 583 | 22 | 591 | 1.84e-165 | 484 |
MS.gene00630.t1 | MTR_6g074910 | 40.136 | 588 | 336 | 7 | 5 | 583 | 8 | 588 | 5.49e-155 | 457 |
MS.gene00630.t1 | MTR_4g053270 | 35.517 | 580 | 354 | 7 | 14 | 583 | 20 | 589 | 3.32e-114 | 352 |
MS.gene00630.t1 | MTR_1g014080 | 32.967 | 637 | 358 | 10 | 6 | 583 | 11 | 637 | 3.18e-111 | 346 |
MS.gene00630.t1 | MTR_8g016270 | 32.848 | 618 | 346 | 11 | 23 | 583 | 43 | 648 | 4.23e-111 | 346 |
MS.gene00630.t1 | MTR_3g105950 | 32.951 | 610 | 344 | 8 | 29 | 583 | 37 | 636 | 1.08e-105 | 332 |
MS.gene00630.t1 | MTR_0204s0010 | 36.930 | 417 | 245 | 9 | 175 | 583 | 42 | 448 | 4.07e-77 | 251 |
MS.gene00630.t1 | MTR_5g098730 | 30.648 | 633 | 358 | 15 | 23 | 583 | 42 | 665 | 6.80e-75 | 251 |
MS.gene00630.t1 | MTR_3g082140 | 30.284 | 634 | 359 | 18 | 23 | 583 | 36 | 659 | 6.65e-71 | 241 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene00630.t1 | AT1G10950 | 88.947 | 570 | 63 | 0 | 14 | 583 | 20 | 589 | 0.0 | 998 |
MS.gene00630.t1 | AT5G37310 | 42.424 | 594 | 317 | 10 | 6 | 583 | 9 | 593 | 1.56e-163 | 479 |
MS.gene00630.t1 | AT5G37310 | 42.424 | 594 | 317 | 10 | 6 | 583 | 9 | 593 | 1.56e-163 | 479 |
MS.gene00630.t1 | AT2G01970 | 41.319 | 576 | 321 | 7 | 18 | 583 | 24 | 592 | 3.89e-161 | 473 |
MS.gene00630.t1 | AT1G14670 | 42.783 | 575 | 314 | 7 | 18 | 583 | 24 | 592 | 2.58e-157 | 463 |
MS.gene00630.t1 | AT1G08350 | 37.861 | 589 | 346 | 9 | 6 | 583 | 10 | 589 | 1.60e-135 | 407 |
MS.gene00630.t1 | AT1G08350 | 37.861 | 589 | 346 | 9 | 6 | 583 | 10 | 589 | 1.60e-135 | 407 |
MS.gene00630.t1 | AT3G13772 | 34.194 | 620 | 339 | 12 | 21 | 583 | 34 | 641 | 2.93e-117 | 362 |
MS.gene00630.t1 | AT1G08350 | 36.784 | 541 | 313 | 9 | 6 | 535 | 10 | 532 | 1.81e-114 | 351 |
MS.gene00630.t1 | AT1G55130 | 33.548 | 620 | 343 | 12 | 21 | 583 | 30 | 637 | 2.09e-114 | 354 |
MS.gene00630.t1 | AT1G08350 | 36.047 | 516 | 311 | 8 | 79 | 583 | 1 | 508 | 1.73e-112 | 345 |
MS.gene00630.t1 | AT2G24170 | 32.903 | 620 | 347 | 10 | 21 | 583 | 30 | 637 | 1.37e-108 | 339 |
MS.gene00630.t1 | AT5G25100 | 32.476 | 622 | 350 | 11 | 21 | 583 | 34 | 644 | 9.40e-106 | 332 |
MS.gene00630.t1 | AT5G25100 | 32.899 | 614 | 342 | 11 | 29 | 583 | 49 | 651 | 3.92e-105 | 331 |
MS.gene00630.t1 | AT5G10840 | 32.149 | 619 | 354 | 10 | 21 | 583 | 40 | 648 | 4.92e-104 | 328 |
MS.gene00630.t1 | AT4G12650 | 30.442 | 634 | 358 | 19 | 23 | 583 | 29 | 652 | 7.40e-71 | 240 |
MS.gene00630.t1 | AT5G35160 | 36.298 | 416 | 247 | 9 | 176 | 583 | 225 | 630 | 1.54e-68 | 234 |
MS.gene00630.t1 | AT5G35160 | 36.298 | 416 | 247 | 9 | 176 | 583 | 253 | 658 | 2.65e-68 | 234 |
MS.gene00630.t1 | AT5G35160 | 36.298 | 416 | 247 | 9 | 176 | 583 | 253 | 658 | 2.65e-68 | 234 |
MS.gene00630.t1 | AT5G35160 | 36.298 | 416 | 247 | 9 | 176 | 583 | 253 | 658 | 2.65e-68 | 234 |
MS.gene00630.t1 | AT2G24170 | 29.953 | 424 | 229 | 9 | 23 | 389 | 32 | 444 | 3.63e-54 | 191 |
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTCCCTCTTGCACTTCT+TGG | 0.145387 | 2.1:+75686916 | MS.gene00630:CDS |
TTAACACGACATGGATTATT+TGG | 0.152845 | 2.1:-75686970 | None:intergenic |
TTCCAAACTAGCTTCTATTT+TGG | 0.154600 | 2.1:+75687579 | MS.gene00630:CDS |
ACATGACATATTCTGTTAAA+TGG | 0.187534 | 2.1:+75684960 | MS.gene00630:CDS |
TGGTGGTTGTCTTTGTTATT+TGG | 0.201206 | 2.1:+75686884 | MS.gene00630:CDS |
GCTCTCACGTCAGTCATTTC+TGG | 0.203783 | 2.1:+75686590 | MS.gene00630:CDS |
TTCCTGCTTCCAAAGGTTTC+GGG | 0.207653 | 2.1:-75684928 | None:intergenic |
CTAGAAACTTTATCTCAATT+TGG | 0.208681 | 2.1:-75682661 | None:intergenic |
CTTCCTGCTTCCAAAGGTTT+CGG | 0.218082 | 2.1:-75684929 | None:intergenic |
CCATTCCTGTGCTTTGGAAT+TGG | 0.234007 | 2.1:+75686799 | MS.gene00630:CDS |
TTGTTGACCCAAAGGGTAAC+TGG | 0.277984 | 2.1:-75682506 | None:intergenic |
CAAATTGAGATAAAGTTTCT+AGG | 0.287579 | 2.1:+75682662 | MS.gene00630:CDS |
TCTGGTTTGTGTAGATTCAT+TGG | 0.293456 | 2.1:+75685166 | MS.gene00630:intron |
GTCATCTTGTTAGCTATTGT+TGG | 0.295103 | 2.1:+75686296 | MS.gene00630:CDS |
ATGCAATTGAAAATAATTAC+TGG | 0.315080 | 2.1:+75682833 | MS.gene00630:CDS |
GGTGGTTGTCTTTGTTATTT+GGG | 0.315967 | 2.1:+75686885 | MS.gene00630:CDS |
TTTGGAAGCAGGAAGATCTT+TGG | 0.319931 | 2.1:+75684937 | MS.gene00630:CDS |
ACACCGGTTTGATGTATATC+TGG | 0.332461 | 2.1:+75685006 | MS.gene00630:CDS |
ATCCAAAATAGAAGCTAGTT+TGG | 0.342162 | 2.1:-75687581 | None:intergenic |
GCACAGTTGTTGGAAGAAAC+TGG | 0.344242 | 2.1:+75686938 | MS.gene00630:CDS |
TTCATGTTTAAGGGTATGTT+GGG | 0.347802 | 2.1:+75684705 | MS.gene00630:intron |
GCTCTTCTTTCAGCTGTTGT+TGG | 0.362045 | 2.1:+75686239 | MS.gene00630:CDS |
TTTCTTTCAGCTGCATCAAC+AGG | 0.365235 | 2.1:+75687495 | MS.gene00630:CDS |
CTATCCATTCTTTGAGCATC+AGG | 0.369958 | 2.1:+75685030 | MS.gene00630:CDS |
CAACAGGTGTACTATGTCTA+TGG | 0.372599 | 2.1:+75687363 | MS.gene00630:intron |
GCACTTCTTGGCACAGTTGT+TGG | 0.373505 | 2.1:+75686928 | MS.gene00630:CDS |
ATGATGGTCATATTCCTAAC+TGG | 0.377894 | 2.1:+75685210 | MS.gene00630:CDS |
TGGTAATACTGCTCACAAAT+GGG | 0.381202 | 2.1:+75682595 | MS.gene00630:CDS |
CTGGTAATACTGCTCACAAA+TGG | 0.386160 | 2.1:+75682594 | MS.gene00630:CDS |
CGCAATATCAAGTGTGACTA+AGG | 0.386852 | 2.1:+75687845 | MS.gene00630:CDS |
TGCTCGGGAAGATGATGATT+TGG | 0.389790 | 2.1:+75685284 | MS.gene00630:CDS |
ATTCATGTTTAAGGGTATGT+TGG | 0.395565 | 2.1:+75684704 | MS.gene00630:intron |
CTTTCAGCTGTTGTTGGTAC+GGG | 0.395892 | 2.1:+75686245 | MS.gene00630:CDS |
TTACTGGTTTGAATTCTTCA+TGG | 0.405452 | 2.1:+75682849 | MS.gene00630:CDS |
TTACCAGGTGGACGGCAAAA+TGG | 0.406461 | 2.1:-75682578 | None:intergenic |
CCACTATCACTGTTCTTGTC+AGG | 0.413713 | 2.1:-75684737 | None:intergenic |
GCTCACAAATGGGGCGGTCT+AGG | 0.414878 | 2.1:+75682605 | MS.gene00630:CDS |
ATGGGTGGACTGCTTCCCTT+TGG | 0.418129 | 2.1:+75687054 | MS.gene00630:CDS |
CAGATGACCCAGTTACCCTT+TGG | 0.419210 | 2.1:+75682498 | MS.gene00630:CDS |
GTCATTTCTGGTTATGTAAG+TGG | 0.420638 | 2.1:+75686602 | MS.gene00630:CDS |
TGTCTATGGCTTCATGCTAC+TGG | 0.424731 | 2.1:+75687377 | MS.gene00630:CDS |
CAAAGGGTAACTGGGTCATC+TGG | 0.434940 | 2.1:-75682497 | None:intergenic |
CTTCAAATGTGCAGGAGCTG+TGG | 0.439343 | 2.1:+75687784 | MS.gene00630:intron |
TCATGATGACCCGAAACCTT+TGG | 0.440658 | 2.1:+75684919 | MS.gene00630:CDS |
TCTTTCAGCTGTTGTTGGTA+CGG | 0.442889 | 2.1:+75686244 | MS.gene00630:CDS |
TCATTTCTGGTTATGTAAGT+GGG | 0.443328 | 2.1:+75686603 | MS.gene00630:CDS |
TCATCTTGTTAGCTATTGTT+GGG | 0.449262 | 2.1:+75686297 | MS.gene00630:CDS |
AGATGACCCAGTTACCCTTT+GGG | 0.452042 | 2.1:+75682499 | MS.gene00630:CDS |
AGGCCGGAGAGAGGAGGAGA+AGG | 0.453628 | 2.1:-75680988 | None:intergenic |
TACCACTTCTTCTCAGGAAT+GGG | 0.459819 | 2.1:-75687006 | None:intergenic |
CAATTCCAAAGCACAGGAAT+GGG | 0.462340 | 2.1:-75686798 | None:intergenic |
TCTCTAGCAGCAATCCCCTT+TGG | 0.469923 | 2.1:+75686856 | MS.gene00630:CDS |
CCCTCTGTAGTTTCTCTGAT+GGG | 0.471861 | 2.1:+75687036 | MS.gene00630:CDS |
GCAGGAGCTGTGGGTCATCT+TGG | 0.473464 | 2.1:+75687794 | MS.gene00630:intron |
GTGAGGTACCACTTCTTCTC+AGG | 0.473501 | 2.1:-75687012 | None:intergenic |
GACCCGAAACCTTTGGAAGC+AGG | 0.477158 | 2.1:+75684926 | MS.gene00630:CDS |
TCATAGACACCAATCCAGTT+AGG | 0.479698 | 2.1:-75685224 | None:intergenic |
CCTGACAAGAACAGTGATAG+TGG | 0.479831 | 2.1:+75684737 | MS.gene00630:CDS |
CTCAGGAATGGGACGAGGAA+TGG | 0.480945 | 2.1:-75686995 | None:intergenic |
GGCAAAGGTTAAACAGTTCA+AGG | 0.487355 | 2.1:+75682810 | MS.gene00630:CDS |
GGGGATGTACTCACGTAATG+GGG | 0.490455 | 2.1:+75686625 | MS.gene00630:CDS |
GGCGGTCTAGGTGAGGTCCT+TGG | 0.495626 | 2.1:+75682617 | MS.gene00630:CDS |
ATGACTATGCAAAGTATGCT+CGG | 0.497038 | 2.1:+75685268 | MS.gene00630:CDS |
TAAATGCTGAGAACTACAAC+TGG | 0.499147 | 2.1:+75687460 | MS.gene00630:CDS |
AGAGACGTCAGTGAAGAATC+TGG | 0.503541 | 2.1:+75686170 | MS.gene00630:CDS |
AAGTGATGCTGTAAGGATCA+TGG | 0.504571 | 2.1:-75686773 | None:intergenic |
CATTTGTGAGCAGTATTACC+AGG | 0.504871 | 2.1:-75682593 | None:intergenic |
TACTGGTTTGAATTCTTCAT+GGG | 0.509222 | 2.1:+75682850 | MS.gene00630:CDS |
ACCTACTTTGTTGACCCAAA+GGG | 0.510739 | 2.1:-75682513 | None:intergenic |
ATCACCTGATGCTCAAAGAA+TGG | 0.511088 | 2.1:-75685034 | None:intergenic |
CCAATTCCAAAGCACAGGAA+TGG | 0.511274 | 2.1:-75686799 | None:intergenic |
TGAATCCAATTCCAAAGCAC+AGG | 0.511325 | 2.1:-75686804 | None:intergenic |
ACCCTCTGTAGTTTCTCTGA+TGG | 0.513978 | 2.1:+75687035 | MS.gene00630:CDS |
AGATGATGATTTGGAAACTC+TGG | 0.515952 | 2.1:+75685293 | MS.gene00630:CDS |
TTCAAATGTGCAGGAGCTGT+GGG | 0.516398 | 2.1:+75687785 | MS.gene00630:intron |
CCGGAGAGAGGAGGAGAAGG+AGG | 0.516747 | 2.1:-75680985 | None:intergenic |
GTTTCTTGAGGATTATTGTA+CGG | 0.519218 | 2.1:-75682536 | None:intergenic |
ACAACCACCATTGTACCAAA+GGG | 0.520818 | 2.1:-75686871 | None:intergenic |
CTCAATGAATATGCTGCCAA+AGG | 0.521836 | 2.1:-75687070 | None:intergenic |
TACTTCCTTCTGGAATTACA+AGG | 0.524010 | 2.1:+75687107 | MS.gene00630:CDS |
GGTCTAGGTGAGGTCCTTGG+TGG | 0.529226 | 2.1:+75682620 | MS.gene00630:CDS |
AAGCGAAGGCCGGAGAGAGG+AGG | 0.529710 | 2.1:-75680994 | None:intergenic |
ATGGGAAAAGTGATGCTGTA+AGG | 0.531501 | 2.1:-75686780 | None:intergenic |
CGGAAGCGAAGGCCGGAGAG+AGG | 0.533115 | 2.1:-75680997 | None:intergenic |
GAGAGAGGAGGAGAAGGAGG+AGG | 0.533714 | 2.1:-75680982 | None:intergenic |
TAATAATTATATGTTTCTTG+AGG | 0.534391 | 2.1:-75682548 | None:intergenic |
TATGTGAAGACAAAGATGTC+AGG | 0.536512 | 2.1:+75687552 | MS.gene00630:CDS |
AGCAATCCCCTTTGGTACAA+TGG | 0.537203 | 2.1:+75686864 | MS.gene00630:CDS |
TCTGACTCGGAAGCGAAGGC+CGG | 0.537290 | 2.1:-75681004 | None:intergenic |
ACCCTTTGGGTCAACAAAGT+AGG | 0.537437 | 2.1:+75682512 | MS.gene00630:CDS |
CGCTTCCGAGTCAGATCACA+AGG | 0.538777 | 2.1:+75681012 | MS.gene00630:CDS |
GTACCACTTCTTCTCAGGAA+TGG | 0.539757 | 2.1:-75687007 | None:intergenic |
TCCAGATGATCTTCCGTTGT+GGG | 0.541641 | 2.1:+75684598 | MS.gene00630:intron |
CTGAGAACTACAACTGGCAA+TGG | 0.542833 | 2.1:+75687466 | MS.gene00630:CDS |
AAAGATCTTCCTGCTTCCAA+AGG | 0.543050 | 2.1:-75684935 | None:intergenic |
CAGGTGGACGGCAAAATGGC+AGG | 0.544775 | 2.1:-75682574 | None:intergenic |
TGACTATGCAAAGTATGCTC+GGG | 0.544864 | 2.1:+75685269 | MS.gene00630:CDS |
TTTGAATCTTGACGAGGCAA+AGG | 0.547575 | 2.1:+75682795 | MS.gene00630:CDS |
AGTCCAGATATACATCAAAC+CGG | 0.549224 | 2.1:-75685009 | None:intergenic |
TGTTAAGTACAATACAGATC+AGG | 0.549850 | 2.1:+75684793 | MS.gene00630:CDS |
TTCTTCTCAGGAATGGGACG+AGG | 0.550039 | 2.1:-75687000 | None:intergenic |
CCTCCTTCTCCTCCTCTCTC+CGG | 0.551038 | 2.1:+75680985 | MS.gene00630:CDS |
GTTCGAATTTGTTTGTGAGG+AGG | 0.551162 | 2.1:+75687816 | MS.gene00630:CDS |
ACAGTATGTGTGACAATTGT+GGG | 0.551779 | 2.1:+75687423 | MS.gene00630:CDS |
ACGTCAGTGAAGAATCTGGC+TGG | 0.556808 | 2.1:+75686174 | MS.gene00630:CDS |
TCAATGAATATGCTGCCAAA+GGG | 0.558339 | 2.1:-75687069 | None:intergenic |
GTGATCTGACTCGGAAGCGA+AGG | 0.559770 | 2.1:-75681008 | None:intergenic |
TTGCCTCGTCAAGATTCAAA+CGG | 0.562495 | 2.1:-75682792 | None:intergenic |
TGTTGACCCAAAGGGTAACT+GGG | 0.563185 | 2.1:-75682505 | None:intergenic |
GTGTCTAAAAGTGACATTAG+TGG | 0.564033 | 2.1:-75684987 | None:intergenic |
TTGGTTCGAATTTGTTTGTG+AGG | 0.564574 | 2.1:+75687813 | MS.gene00630:CDS |
GGGATGTACTCACGTAATGG+GGG | 0.566435 | 2.1:+75686626 | MS.gene00630:CDS |
GACAACCACCATTGTACCAA+AGG | 0.567774 | 2.1:-75686872 | None:intergenic |
TCTTTCCAGGGAATGTGGAA+AGG | 0.569777 | 2.1:+75682758 | MS.gene00630:intron |
TACAGTATGTGTGACAATTG+TGG | 0.574298 | 2.1:+75687422 | MS.gene00630:CDS |
GTCCCATTCCTGAGAAGAAG+TGG | 0.575509 | 2.1:+75687004 | MS.gene00630:CDS |
GGTCATATTCCTAACTGGAT+TGG | 0.577037 | 2.1:+75685215 | MS.gene00630:CDS |
GTCCAGATGATCTTCCGTTG+TGG | 0.579841 | 2.1:+75684597 | MS.gene00630:intron |
GACCTACTTTGTTGACCCAA+AGG | 0.580015 | 2.1:-75682514 | None:intergenic |
ATTTCTGGTTATGTAAGTGG+GGG | 0.596930 | 2.1:+75686605 | MS.gene00630:CDS |
CTTAGTCACACTTGATATTG+CGG | 0.601382 | 2.1:-75687844 | None:intergenic |
AACAATGAATGTTGTGACAA+TGG | 0.601553 | 2.1:-75686561 | None:intergenic |
CATTTCTGGTTATGTAAGTG+GGG | 0.604552 | 2.1:+75686604 | MS.gene00630:CDS |
TCTGTAGTTTCTCTGATGGG+TGG | 0.605774 | 2.1:+75687039 | MS.gene00630:CDS |
TTTCTGGTTATGTAAGTGGG+GGG | 0.606723 | 2.1:+75686606 | MS.gene00630:CDS |
ACTGACCTTGTGATCTGACT+CGG | 0.610527 | 2.1:-75681017 | None:intergenic |
TGATGTTCTTGTGTGTGTAA+AGG | 0.612278 | 2.1:-75684769 | None:intergenic |
GGAATGGTCTTAACACGACA+TGG | 0.612418 | 2.1:-75686979 | None:intergenic |
GGTAATACTGCTCACAAATG+GGG | 0.629300 | 2.1:+75682596 | MS.gene00630:CDS |
GGGTAACTGGGTCATCTGGT+TGG | 0.632836 | 2.1:-75682493 | None:intergenic |
TCATGTTTAAGGGTATGTTG+GGG | 0.633391 | 2.1:+75684706 | MS.gene00630:intron |
AATCCCCTTTGGTACAATGG+TGG | 0.635651 | 2.1:+75686867 | MS.gene00630:CDS |
ACTCACCTTGTAATTCCAGA+AGG | 0.636618 | 2.1:-75687112 | None:intergenic |
CCAGATGATCTTCCGTTGTG+GGG | 0.646743 | 2.1:+75684599 | MS.gene00630:intron |
TTGCCGTTTGAATCTTGACG+AGG | 0.647649 | 2.1:+75682789 | MS.gene00630:CDS |
ACTGTGCCAAGAAGTGCAAG+AGG | 0.648561 | 2.1:-75686922 | None:intergenic |
CTTGGACTGGGAATTCTCTG+TGG | 0.651131 | 2.1:+75687621 | MS.gene00630:CDS |
GAGAAACTACAGAGGGTGTG+AGG | 0.651955 | 2.1:-75687029 | None:intergenic |
CAAATGGGGCGGTCTAGGTG+AGG | 0.657435 | 2.1:+75682610 | MS.gene00630:CDS |
CAATAAGTTCGTTGCCACCA+AGG | 0.658441 | 2.1:-75682634 | None:intergenic |
GAGCAGTATTACCAGGTGGA+CGG | 0.658884 | 2.1:-75682586 | None:intergenic |
TCTGGCTGGAAACTTGTGCA+TGG | 0.660877 | 2.1:+75686188 | MS.gene00630:CDS |
CTGTGCCAAGAAGTGCAAGA+GGG | 0.661110 | 2.1:-75686921 | None:intergenic |
AGATCCATAAAATATAGCCA+CGG | 0.678616 | 2.1:-75686836 | None:intergenic |
CCCATCAGAGAAACTACAGA+GGG | 0.680889 | 2.1:-75687036 | None:intergenic |
AATACTGCTCACAAATGGGG+CGG | 0.688456 | 2.1:+75682599 | MS.gene00630:CDS |
CAACCACCATTGTACCAAAG+GGG | 0.709089 | 2.1:-75686870 | None:intergenic |
AGAAGAGCCAAACTGCGAGG+AGG | 0.711367 | 2.1:-75686224 | None:intergenic |
GAAAGAAGAGCCAAACTGCG+AGG | 0.712124 | 2.1:-75686227 | None:intergenic |
GTTGTTGGAAGAAACTGGAG+CGG | 0.719624 | 2.1:+75686943 | MS.gene00630:CDS |
CAGTATGTGTGACAATTGTG+GGG | 0.720490 | 2.1:+75687424 | MS.gene00630:CDS |
TTGTGAGCAGTATTACCAGG+TGG | 0.723303 | 2.1:-75682590 | None:intergenic |
GTGATAGGCATACCCCACAA+CGG | 0.726120 | 2.1:-75684611 | None:intergenic |
TGGATTCATCTTAAACACCG+TGG | 0.734062 | 2.1:+75686819 | MS.gene00630:CDS |
ATGTTGTGACAATGGCACCT+CGG | 0.746856 | 2.1:-75686553 | None:intergenic |
ACCCATCAGAGAAACTACAG+AGG | 0.767119 | 2.1:-75687037 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 75680962 | 75687865 | 75680962 | ID=MS.gene00630 |
chr2.1 | mRNA | 75680962 | 75687865 | 75680962 | ID=MS.gene00630.t1;Parent=MS.gene00630 |
chr2.1 | exon | 75680962 | 75681033 | 75680962 | ID=MS.gene00630.t1.exon1;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75680962 | 75681033 | 75680962 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75682491 | 75682683 | 75682491 | ID=MS.gene00630.t1.exon2;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75682491 | 75682683 | 75682491 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75682767 | 75682871 | 75682767 | ID=MS.gene00630.t1.exon3;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75682767 | 75682871 | 75682767 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75684603 | 75684620 | 75684603 | ID=MS.gene00630.t1.exon4;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75684603 | 75684620 | 75684603 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75684717 | 75684814 | 75684717 | ID=MS.gene00630.t1.exon5;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75684717 | 75684814 | 75684717 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75684899 | 75685051 | 75684899 | ID=MS.gene00630.t1.exon6;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75684899 | 75685051 | 75684899 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75685180 | 75685314 | 75685180 | ID=MS.gene00630.t1.exon7;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75685180 | 75685314 | 75685180 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75686167 | 75686333 | 75686167 | ID=MS.gene00630.t1.exon8;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75686167 | 75686333 | 75686167 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75686553 | 75686647 | 75686553 | ID=MS.gene00630.t1.exon9;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75686553 | 75686647 | 75686553 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75686755 | 75687128 | 75686755 | ID=MS.gene00630.t1.exon10;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75686755 | 75687128 | 75686755 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75687369 | 75687642 | 75687369 | ID=MS.gene00630.t1.exon11;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75687369 | 75687642 | 75687369 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
chr2.1 | exon | 75687798 | 75687865 | 75687798 | ID=MS.gene00630.t1.exon12;Parent=MS.gene00630.t1 |
chr2.1 | CDS | 75687798 | 75687865 | 75687798 | ID=cds.MS.gene00630.t1;Parent=MS.gene00630.t1 |
Gene Sequence |
Protein sequence |