Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028206.t1 | RHN42310.1 | 100 | 528 | 0 | 0 | 3 | 530 | 64 | 591 | 1.20E-295 | 1025 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028206.t1 | Q9ZPS7 | 90.4 | 530 | 51 | 0 | 1 | 530 | 63 | 592 | 5.3e-271 | 934.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028206.t1 | A0A396GMP8 | 100.0 | 528 | 0 | 0 | 3 | 530 | 64 | 591 | 8.9e-296 | 1025.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene028206 | MS.gene08367 | PPI |
| MS.gene023251 | MS.gene028206 | PPI |
| MS.gene002060 | MS.gene028206 | PPI |
| MS.gene028206 | MS.gene072047 | PPI |
| MS.gene00630 | MS.gene028206 | PPI |
| MS.gene028206 | MS.gene047189 | PPI |
| MS.gene34981 | MS.gene028206 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028206.t1 | MTR_6g074910 | 89.245 | 530 | 56 | 1 | 1 | 530 | 60 | 588 | 0.0 | 967 |
| MS.gene028206.t1 | MTR_5g077170 | 77.925 | 530 | 116 | 1 | 2 | 530 | 62 | 591 | 0.0 | 871 |
| MS.gene028206.t1 | MTR_4g053270 | 48.295 | 528 | 262 | 4 | 7 | 530 | 69 | 589 | 3.37e-179 | 517 |
| MS.gene028206.t1 | MTR_2g006300 | 40.824 | 534 | 302 | 6 | 2 | 530 | 59 | 583 | 7.93e-132 | 395 |
| MS.gene028206.t1 | MTR_8g088730 | 40.454 | 529 | 301 | 6 | 7 | 530 | 70 | 589 | 2.95e-131 | 394 |
| MS.gene028206.t1 | MTR_8g016270 | 35.529 | 577 | 319 | 6 | 2 | 530 | 77 | 648 | 7.56e-125 | 380 |
| MS.gene028206.t1 | MTR_3g105950 | 33.910 | 578 | 327 | 7 | 2 | 530 | 65 | 636 | 3.87e-112 | 347 |
| MS.gene028206.t1 | MTR_1g014080 | 33.910 | 578 | 327 | 8 | 2 | 530 | 66 | 637 | 1.04e-110 | 343 |
| MS.gene028206.t1 | MTR_0204s0010 | 29.670 | 455 | 291 | 9 | 94 | 530 | 5 | 448 | 3.57e-73 | 239 |
| MS.gene028206.t1 | MTR_5g098730 | 26.789 | 601 | 354 | 13 | 3 | 530 | 78 | 665 | 1.37e-71 | 241 |
| MS.gene028206.t1 | MTR_3g082140 | 26.246 | 602 | 358 | 13 | 2 | 530 | 71 | 659 | 9.45e-71 | 239 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028206.t1 | AT2G01970 | 90.377 | 530 | 51 | 0 | 1 | 530 | 63 | 592 | 0.0 | 976 |
| MS.gene028206.t1 | AT1G14670 | 89.623 | 530 | 55 | 0 | 1 | 530 | 63 | 592 | 0.0 | 947 |
| MS.gene028206.t1 | AT5G37310 | 84.190 | 525 | 83 | 0 | 6 | 530 | 69 | 593 | 0.0 | 905 |
| MS.gene028206.t1 | AT5G37310 | 84.190 | 525 | 83 | 0 | 6 | 530 | 69 | 593 | 0.0 | 905 |
| MS.gene028206.t1 | AT1G08350 | 50.095 | 527 | 256 | 5 | 7 | 530 | 67 | 589 | 0.0 | 553 |
| MS.gene028206.t1 | AT1G08350 | 50.095 | 527 | 256 | 5 | 7 | 530 | 67 | 589 | 0.0 | 553 |
| MS.gene028206.t1 | AT1G08350 | 49.023 | 512 | 254 | 5 | 22 | 530 | 1 | 508 | 0.0 | 527 |
| MS.gene028206.t1 | AT1G08350 | 48.791 | 455 | 227 | 4 | 7 | 458 | 67 | 518 | 5.26e-159 | 464 |
| MS.gene028206.t1 | AT1G10950 | 39.212 | 533 | 310 | 6 | 3 | 530 | 66 | 589 | 6.31e-127 | 383 |
| MS.gene028206.t1 | AT3G13772 | 33.910 | 578 | 327 | 7 | 2 | 530 | 70 | 641 | 5.62e-118 | 362 |
| MS.gene028206.t1 | AT1G55130 | 35.149 | 569 | 316 | 7 | 10 | 530 | 74 | 637 | 2.86e-117 | 360 |
| MS.gene028206.t1 | AT2G24170 | 34.489 | 577 | 325 | 7 | 2 | 530 | 66 | 637 | 1.59e-113 | 350 |
| MS.gene028206.t1 | AT5G10840 | 33.218 | 578 | 332 | 8 | 2 | 530 | 76 | 648 | 3.63e-110 | 342 |
| MS.gene028206.t1 | AT5G25100 | 32.874 | 581 | 332 | 8 | 2 | 530 | 77 | 651 | 3.23e-109 | 340 |
| MS.gene028206.t1 | AT5G25100 | 32.874 | 581 | 332 | 8 | 2 | 530 | 70 | 644 | 3.43e-109 | 339 |
| MS.gene028206.t1 | AT5G35160 | 27.713 | 599 | 348 | 15 | 6 | 530 | 43 | 630 | 6.62e-72 | 241 |
| MS.gene028206.t1 | AT5G35160 | 27.713 | 599 | 348 | 15 | 6 | 530 | 71 | 658 | 1.17e-71 | 241 |
| MS.gene028206.t1 | AT5G35160 | 27.713 | 599 | 348 | 15 | 6 | 530 | 71 | 658 | 1.17e-71 | 241 |
| MS.gene028206.t1 | AT5G35160 | 27.713 | 599 | 348 | 15 | 6 | 530 | 71 | 658 | 1.17e-71 | 241 |
| MS.gene028206.t1 | AT4G12650 | 26.182 | 592 | 363 | 13 | 6 | 530 | 68 | 652 | 1.40e-64 | 222 |
| MS.gene028206.t1 | AT2G24170 | 30.287 | 383 | 215 | 7 | 2 | 336 | 66 | 444 | 3.71e-56 | 194 |
Find 130 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGAAGGGACTAAT+TGG | 0.200318 | 4.2:-16312514 | MS.gene028206:CDS |
| TTGCCAATCTGGGGATTTAT+TGG | 0.213909 | 4.2:-16313400 | MS.gene028206:CDS |
| ACCAAGGGCAGCTGCAAATA+TGG | 0.266358 | 4.2:+16312801 | None:intergenic |
| GCAACTGCTGCCCTTCCTTT+TGG | 0.272026 | 4.2:-16312313 | MS.gene028206:CDS |
| ATGCAAACTTCGTTCTTCTT+TGG | 0.295356 | 4.2:-16309723 | MS.gene028206:CDS |
| AAGTTACCAGCGTCCATATT+AGG | 0.305475 | 4.2:+16312272 | None:intergenic |
| TTTCTTTGTGGTGGATCAAC+TGG | 0.306655 | 4.2:-16309807 | MS.gene028206:CDS |
| TTTGCGTGATAGTCCTAATA+TGG | 0.324378 | 4.2:-16312285 | MS.gene028206:CDS |
| GCAAGTCATCGTAATACATT+TGG | 0.331551 | 4.2:+16313419 | None:intergenic |
| TTTGCAGCTGCCCTTGGTTC+CGG | 0.340488 | 4.2:-16312796 | MS.gene028206:CDS |
| GCTCTCACATCTGGAATTGC+TGG | 0.344836 | 4.2:-16312560 | MS.gene028206:CDS |
| CCACAACTACTCACACTTGA+TGG | 0.349739 | 4.2:+16309608 | None:intergenic |
| GTTCCGAGAGGCAGTTAAAA+AGG | 0.354365 | 4.2:-16313452 | MS.gene028206:CDS |
| ATTACGATGACTTGCCAATC+TGG | 0.360772 | 4.2:-16313411 | MS.gene028206:CDS |
| GTCATATATGCTCTCACATC+TGG | 0.374176 | 4.2:-16312569 | MS.gene028206:CDS |
| GAAACCCTGCCATTGCCATC+TGG | 0.384130 | 4.2:+16312125 | None:intergenic |
| TCCTTCTATATTCAACTTGA+AGG | 0.387134 | 4.2:-16312524 | MS.gene028206:CDS |
| AAATAAAGCTCCTCGGTTGT+AGG | 0.389595 | 4.2:+16312604 | None:intergenic |
| CTTGTGTTAGGTGGAATTGC+AGG | 0.390339 | 4.2:-16312241 | MS.gene028206:CDS |
| CACATCACTTGGAGATTCAC+TGG | 0.393428 | 4.2:-16313126 | MS.gene028206:CDS |
| CCCTTCAAGTTGAATATAGA+AGG | 0.401751 | 4.2:+16312523 | None:intergenic |
| GCAAATATGGACTTGAACTT+AGG | 0.402386 | 4.2:+16312814 | None:intergenic |
| TCCATATTTGCAGCTGCCCT+TGG | 0.404556 | 4.2:-16312802 | MS.gene028206:CDS |
| TTCGTTCTTCTTTGGCTACA+TGG | 0.414161 | 4.2:-16309715 | MS.gene028206:CDS |
| AAGCAATTGCAACTGTGTTA+AGG | 0.431380 | 4.2:+16312341 | None:intergenic |
| ACTTCGCCATTACTTGTGTT+AGG | 0.433145 | 4.2:-16312253 | MS.gene028206:CDS |
| GAGAAATTCCACCTCTTCCT+TGG | 0.435711 | 4.2:-16312165 | MS.gene028206:CDS |
| GAAAATATTTATACTCGCTC+GGG | 0.436229 | 4.2:+16313350 | None:intergenic |
| ATTGGAACTGTTGACAAAGA+AGG | 0.436776 | 4.2:-16313382 | MS.gene028206:CDS |
| AGAAAATATTTATACTCGCT+CGG | 0.436979 | 4.2:+16313349 | None:intergenic |
| AGTTTATGTACACAGTGAAA+TGG | 0.441672 | 4.2:-16313210 | MS.gene028206:CDS |
| AAGGAAGAGGTGGAATTTCT+CGG | 0.444124 | 4.2:+16312167 | None:intergenic |
| TTCTTCTCTTCCACATCACT+TGG | 0.450920 | 4.2:-16313137 | MS.gene028206:CDS |
| CGCAAATTGTGCCAAAAGGA+AGG | 0.452498 | 4.2:+16312302 | None:intergenic |
| TTGCTAGTGTCTGGGGCCAC+AGG | 0.452557 | 4.2:-16312063 | MS.gene028206:CDS |
| AAACCCTGCCATTGCCATCT+GGG | 0.456769 | 4.2:+16312126 | None:intergenic |
| AGGAAGAGGTGGAATTTCTC+GGG | 0.456787 | 4.2:+16312168 | None:intergenic |
| CACGCATGAGAATGGTTGCC+AGG | 0.459320 | 4.2:+16313056 | None:intergenic |
| TGGACTTGAACTTAGGAAAC+CGG | 0.463443 | 4.2:+16312821 | None:intergenic |
| TTCCACCTCTTCCTTGGTAC+AGG | 0.464858 | 4.2:-16312159 | MS.gene028206:CDS |
| CTTCAAGACACGCATGAGAA+TGG | 0.465748 | 4.2:+16313048 | None:intergenic |
| TCAACTTGAAGGGACTAATT+GGG | 0.473972 | 4.2:-16312513 | MS.gene028206:intron |
| GTAGTACAGCTCTATGTAGA+TGG | 0.476433 | 4.2:+16312090 | None:intergenic |
| TGCCATTGCCATCTGGGGAA+TGG | 0.478930 | 4.2:+16312132 | None:intergenic |
| CCACTTCCCTGTCCTCAGTC+AGG | 0.480439 | 4.2:+16313239 | None:intergenic |
| AATGAGTGCGTCTGAATGCC+AGG | 0.484750 | 4.2:-16313619 | None:intergenic |
| ATTCCCCAGATGGCAATGGC+AGG | 0.485795 | 4.2:-16312130 | MS.gene028206:CDS |
| TATGGCTTCTTTCTCATGCT+CGG | 0.487027 | 4.2:-16309681 | MS.gene028206:CDS |
| TGTTAAGGAAGCAGAACATA+AGG | 0.488623 | 4.2:+16312356 | None:intergenic |
| CTATGTAGATGGCACTGAAT+GGG | 0.490420 | 4.2:+16312101 | None:intergenic |
| TACATGGCCTGCATCTGCTA+TGG | 0.491443 | 4.2:-16309699 | MS.gene028206:CDS |
| TTACGATGACTTGCCAATCT+GGG | 0.494168 | 4.2:-16313410 | MS.gene028206:CDS |
| AATAAAGCTCCTCGGTTGTA+GGG | 0.495013 | 4.2:+16312605 | None:intergenic |
| GTCAGGTCAACCACAGAATG+AGG | 0.499157 | 4.2:+16313256 | None:intergenic |
| TACGCAAGATCAGATATGTC+TGG | 0.503961 | 4.2:-16309750 | MS.gene028206:CDS |
| TCTTTGTCCGCCACATATAC+CGG | 0.505280 | 4.2:-16309632 | MS.gene028206:CDS |
| TAGTAGTGCGGACAGGTGCT+TGG | 0.505666 | 4.2:+16312197 | None:intergenic |
| AAGCAGAACATAAGGAAAAG+AGG | 0.507100 | 4.2:+16312364 | None:intergenic |
| TCTATGTAGATGGCACTGAA+TGG | 0.507383 | 4.2:+16312100 | None:intergenic |
| ATATGTGGCGGACAAAGAGC+AGG | 0.510664 | 4.2:+16309637 | None:intergenic |
| TTTCTCATGCTCGGTAGCGT+AGG | 0.518262 | 4.2:-16309672 | MS.gene028206:CDS |
| ATCACGCAAATTGTGCCAAA+AGG | 0.520209 | 4.2:+16312298 | None:intergenic |
| CCACAGAATGAGGGTCCATA+CGG | 0.520478 | 4.2:+16313266 | None:intergenic |
| CCTTCTATATTCAACTTGAA+GGG | 0.527417 | 4.2:-16312523 | MS.gene028206:CDS |
| GTTAGAAACTTATTGCTGAC+AGG | 0.528315 | 4.2:-16312403 | MS.gene028206:CDS |
| TGGTTGACCTGACTGAGGAC+AGG | 0.531034 | 4.2:-16313246 | MS.gene028206:CDS |
| CCTGACTGAGGACAGGGAAG+TGG | 0.535058 | 4.2:-16313239 | MS.gene028206:CDS |
| GTTCCAATAAATCCCCAGAT+TGG | 0.536248 | 4.2:+16313397 | None:intergenic |
| TCAACTGGCTTATTCATCTA+CGG | 0.537761 | 4.2:-16309792 | MS.gene028206:CDS |
| AGCAGAACATAAGGAAAAGA+GGG | 0.539091 | 4.2:+16312365 | None:intergenic |
| GGAAAAGAGGGCCACAAAAG+AGG | 0.539962 | 4.2:+16312377 | None:intergenic |
| TAACTGAGTGCCGGAACCAA+GGG | 0.542563 | 4.2:+16312786 | None:intergenic |
| ACTTGATGGACCGGTATATG+TGG | 0.546448 | 4.2:+16309622 | None:intergenic |
| ACTACTCACACTTGATGGAC+CGG | 0.548206 | 4.2:+16309613 | None:intergenic |
| GGACAAAGAGCAGGGAGGCA+CGG | 0.550307 | 4.2:+16309646 | None:intergenic |
| GCTGATGATCAAGAGGAGAC+AGG | 0.551210 | 4.2:-16312871 | MS.gene028206:CDS |
| GCGCTTGGTGAGGTGTTGAA+TGG | 0.553794 | 4.2:-16313574 | MS.gene028206:CDS |
| AAAGAAGCCATAGCAGATGC+AGG | 0.557569 | 4.2:+16309692 | None:intergenic |
| ATGATCAAGAGGAGACAGGA+TGG | 0.557782 | 4.2:-16312867 | MS.gene028206:CDS |
| CTCGGGGATATTTAGTAGTG+CGG | 0.558407 | 4.2:+16312185 | None:intergenic |
| AAAGAAAAGACTGAAGCGCT+TGG | 0.559289 | 4.2:-16313589 | MS.gene028206:CDS |
| CGTCACACAGGAGTTTATGA+TGG | 0.560364 | 4.2:+16313099 | None:intergenic |
| AGCTTTATTTACTGCACTCG+TGG | 0.560606 | 4.2:-16312591 | MS.gene028206:CDS |
| GGATATTTAGTAGTGCGGAC+AGG | 0.564998 | 4.2:+16312190 | None:intergenic |
| GTGCTCCTGTACCAAGGAAG+AGG | 0.566138 | 4.2:+16312154 | None:intergenic |
| TCGCCATTACTTGTGTTAGG+TGG | 0.567016 | 4.2:-16312250 | MS.gene028206:CDS |
| CAGGAGCACCATTCCCCAGA+TGG | 0.572619 | 4.2:-16312140 | MS.gene028206:CDS |
| ATTCCACCTAACACAAGTAA+TGG | 0.572703 | 4.2:+16312247 | None:intergenic |
| CAGAAGATCATGAATGGTGG+TGG | 0.572866 | 4.2:-16311943 | MS.gene028206:CDS |
| AACTGTTGACAAAGAAGGAA+AGG | 0.575555 | 4.2:-16313377 | MS.gene028206:CDS |
| AAGATCATGAATGGTGGTGG+AGG | 0.577459 | 4.2:-16311940 | MS.gene028206:intron |
| GCAAATTGTGCCAAAAGGAA+GGG | 0.577825 | 4.2:+16312303 | None:intergenic |
| TACGATGACTTGCCAATCTG+GGG | 0.582508 | 4.2:-16313409 | MS.gene028206:CDS |
| TTCCCCAGATGGCAATGGCA+GGG | 0.592880 | 4.2:-16312129 | MS.gene028206:CDS |
| TCTGCAAGAAGACGCTCACA+AGG | 0.594686 | 4.2:-16313489 | MS.gene028206:CDS |
| AACCCTGCCATTGCCATCTG+GGG | 0.595625 | 4.2:+16312127 | None:intergenic |
| CTCCTGTACCAAGGAAGAGG+TGG | 0.597138 | 4.2:+16312157 | None:intergenic |
| CACCATTCCCCAGATGGCAA+TGG | 0.597636 | 4.2:-16312134 | MS.gene028206:CDS |
| CAGAGTGAATAACTGAGTGC+CGG | 0.598774 | 4.2:+16312777 | None:intergenic |
| CAGTGAATCTCCAAGTGATG+TGG | 0.599430 | 4.2:+16313127 | None:intergenic |
| GTTCATAAGGAGCACTAACA+AGG | 0.599847 | 4.2:+16313545 | None:intergenic |
| ATAACTGAGTGCCGGAACCA+AGG | 0.601440 | 4.2:+16312785 | None:intergenic |
| CACAGAATGAGGGTCCATAC+GGG | 0.605974 | 4.2:+16313267 | None:intergenic |
| GGAAGCTGCTGATGATCAAG+AGG | 0.608953 | 4.2:-16312878 | MS.gene028206:CDS |
| ACAGGATGGAAGTACATTCA+CGG | 0.609901 | 4.2:-16312853 | MS.gene028206:CDS |
| GATTGAAATCAGTGCCCGTA+TGG | 0.621489 | 4.2:-16313281 | MS.gene028206:CDS |
| TTGCTGCAGAAGATCATGAA+TGG | 0.621681 | 4.2:-16311949 | MS.gene028206:CDS |
| GTGCAGTAAATAAAGCTCCT+CGG | 0.626601 | 4.2:+16312597 | None:intergenic |
| CATCATAAACTCCTGTGTGA+CGG | 0.630326 | 4.2:-16313098 | MS.gene028206:CDS |
| GATAGTCCTAATATGGACGC+TGG | 0.635172 | 4.2:-16312278 | MS.gene028206:CDS |
| GTATTCTATCCCTACAACCG+AGG | 0.642112 | 4.2:-16312614 | MS.gene028206:CDS |
| CAAAAGAAGAACCGTCACAC+AGG | 0.644678 | 4.2:+16313087 | None:intergenic |
| TCAGGTCAACCACAGAATGA+GGG | 0.644900 | 4.2:+16313257 | None:intergenic |
| GGTTGACCTGACTGAGGACA+GGG | 0.648121 | 4.2:-16313245 | MS.gene028206:CDS |
| TATGTACACAGTGAAATGGA+AGG | 0.649524 | 4.2:-16313206 | MS.gene028206:CDS |
| CCGTATGGACCCTCATTCTG+TGG | 0.650303 | 4.2:-16313266 | MS.gene028206:CDS |
| AAAGACTGAAGCGCTTGGTG+AGG | 0.652344 | 4.2:-16313584 | MS.gene028206:CDS |
| AAGTTGAATATAGAAGGAAG+TGG | 0.654133 | 4.2:+16312529 | None:intergenic |
| CACCAGATATGCTCAAGACG+AGG | 0.655302 | 4.2:-16312899 | MS.gene028206:intron |
| TGATGGACCGGTATATGTGG+CGG | 0.659080 | 4.2:+16309625 | None:intergenic |
| GGAATGGTGCTCCTGTACCA+AGG | 0.679836 | 4.2:+16312148 | None:intergenic |
| TATGTGGCGGACAAAGAGCA+GGG | 0.684805 | 4.2:+16309638 | None:intergenic |
| GGAAGAGGTGGAATTTCTCG+GGG | 0.685340 | 4.2:+16312169 | None:intergenic |
| CGTCACTGCTTTCATCACTG+TGG | 0.690084 | 4.2:-16311990 | MS.gene028206:CDS |
| TTCTGTGGTTGACCTGACTG+AGG | 0.695894 | 4.2:-16313251 | MS.gene028206:CDS |
| CTGCAAGAAGACGCTCACAA+GGG | 0.699485 | 4.2:-16313488 | MS.gene028206:CDS |
| CTGCAGAAGATCATGAATGG+TGG | 0.720682 | 4.2:-16311946 | MS.gene028206:CDS |
| GCAAGTTAATCAGTTCCGAG+AGG | 0.727165 | 4.2:-16313464 | MS.gene028206:CDS |
| TGTAGATAGTGTAAATCCTG+TGG | 0.748430 | 4.2:+16312047 | None:intergenic |
| GTGGCGGACAAAGAGCAGGG+AGG | 0.771980 | 4.2:+16309641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311630-16311649 | MS.gene028206:intron | 100.0% |
| !! | AACTGATGTATAAAATATAT+GGG | + | chr4.2:16312775-16312794 | None:intergenic | 15.0% |
| !! | ACAAAAGTAAAAAAAAAAAC+TGG | - | chr4.2:16312156-16312175 | MS.gene028206:CDS | 15.0% |
| !! | TACAAACTCAAAAATAAATA+TGG | + | chr4.2:16311494-16311513 | None:intergenic | 15.0% |
| !!! | TAATTTTTAGCTTAGTATAA+GGG | - | chr4.2:16312918-16312937 | MS.gene028206:intron | 15.0% |
| !!! | TATTTATTTTTGAGTTTGTA+TGG | - | chr4.2:16311494-16311513 | MS.gene028206:intron | 15.0% |
| !!! | TTTTTAAACTTAAGTTCATA+AGG | + | chr4.2:16309689-16309708 | None:intergenic | 15.0% |
| !! | AATAATTAGAGAAAGTAAGA+TGG | - | chr4.2:16312567-16312586 | MS.gene028206:CDS | 20.0% |
| !! | AATTAAAACTGTAACAGATT+TGG | - | chr4.2:16312646-16312665 | MS.gene028206:CDS | 20.0% |
| !! | ATAAGCTCAAACTTAAATTT+GGG | + | chr4.2:16313110-16313129 | None:intergenic | 20.0% |
| !! | ATTCAGAATGAAAATTTGAA+AGG | + | chr4.2:16312429-16312448 | None:intergenic | 20.0% |
| !! | CAACTGATGTATAAAATATA+TGG | + | chr4.2:16312776-16312795 | None:intergenic | 20.0% |
| !! | GAAGTAAGCAATAATAAAAT+TGG | + | chr4.2:16313243-16313262 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAAAAACTGT+TGG | + | chr4.2:16313197-16313216 | None:intergenic | 20.0% |
| !! | TACTAAGCTAAAAATTAGTT+AGG | + | chr4.2:16312915-16312934 | None:intergenic | 20.0% |
| !! | TCAAAAATAAATATGGTGAA+AGG | + | chr4.2:16311487-16311506 | None:intergenic | 20.0% |
| !! | TGTATCAATGTTTAAAAATC+TGG | + | chr4.2:16312282-16312301 | None:intergenic | 20.0% |
| !!! | CTAATTTTTAGCTTAGTATA+AGG | - | chr4.2:16312917-16312936 | MS.gene028206:intron | 20.0% |
| !!! | TATTTCTATGATCTTATTCT+AGG | + | chr4.2:16311785-16311804 | None:intergenic | 20.0% |
| !!! | TCTATTTTTTTTGAAAGTAG+AGG | - | chr4.2:16313286-16313305 | MS.gene028206:CDS | 20.0% |
| !!! | TTGTTGAAGCTTTTTTTTAA+AGG | - | chr4.2:16310496-16310515 | MS.gene028206:intron | 20.0% |
| ! | AAAAAAAGCTTCAACAATGA+AGG | + | chr4.2:16310493-16310512 | None:intergenic | 25.0% |
| ! | AAAAAAGCTTCAACAATGAA+GGG | + | chr4.2:16310492-16310511 | None:intergenic | 25.0% |
| ! | AAAATAAATATGGTGAAAGG+TGG | + | chr4.2:16311484-16311503 | None:intergenic | 25.0% |
| ! | AATAGACCAATGTTCTATAT+AGG | + | chr4.2:16310255-16310274 | None:intergenic | 25.0% |
| ! | AATCCAAAATTCGATTATAC+TGG | + | chr4.2:16311374-16311393 | None:intergenic | 25.0% |
| ! | AATGTTCTATATAGGTGAAT+AGG | + | chr4.2:16310247-16310266 | None:intergenic | 25.0% |
| ! | ACCATGTGATAACTAATTAA+TGG | + | chr4.2:16311571-16311590 | None:intergenic | 25.0% |
| ! | AGAAAATATTTATACTCGCT+CGG | + | chr4.2:16309872-16309891 | None:intergenic | 25.0% |
| ! | AGCTAAAAATTAGTTAGGTT+TGG | + | chr4.2:16312910-16312929 | None:intergenic | 25.0% |
| ! | AGTAAAGTGAATTTGGATAA+GGG | - | chr4.2:16312991-16313010 | MS.gene028206:intron | 25.0% |
| ! | ATTACTGTTTGATTGTGAAA+TGG | - | chr4.2:16310746-16310765 | MS.gene028206:intron | 25.0% |
| ! | ATTTAATCTAACCCTTCTTA+TGG | + | chr4.2:16312614-16312633 | None:intergenic | 25.0% |
| ! | CAATTTGGTTAATTGGATTA+CGG | - | chr4.2:16312203-16312222 | MS.gene028206:CDS | 25.0% |
| ! | CATAAGCTCAAACTTAAATT+TGG | + | chr4.2:16313111-16313130 | None:intergenic | 25.0% |
| ! | GAATTTAGAAATGCTATGAT+TGG | + | chr4.2:16313175-16313194 | None:intergenic | 25.0% |
| ! | TAAAAAAGAGAAAGACTCTA+CGG | - | chr4.2:16309703-16309722 | MS.gene028206:CDS | 25.0% |
| ! | TAAATGACCCATATTTAGTA+AGG | - | chr4.2:16312672-16312691 | MS.gene028206:intron | 25.0% |
| ! | TATTCACCTATATAGAACAT+TGG | - | chr4.2:16310246-16310265 | MS.gene028206:intron | 25.0% |
| ! | TGAAAATTTGAAAGGAAGAA+AGG | + | chr4.2:16312421-16312440 | None:intergenic | 25.0% |
| ! | TGTGAATATGAATATAGTAC+AGG | + | chr4.2:16311736-16311755 | None:intergenic | 25.0% |
| ! | TTTAATCTAACCCTTCTTAT+GGG | + | chr4.2:16312613-16312632 | None:intergenic | 25.0% |
| !! | AAAAAAACTGGTTCAATTAG+CGG | - | chr4.2:16312168-16312187 | MS.gene028206:CDS | 25.0% |
| !! | CTCTTTTGAATGATATTCTT+TGG | - | chr4.2:16312852-16312871 | MS.gene028206:CDS | 25.0% |
| !!! | ACAGTTTTAATTAGATTCTC+CGG | + | chr4.2:16312638-16312657 | None:intergenic | 25.0% |
| !!! | CAATGTTTTGAAAATCAAAC+CGG | - | chr4.2:16312089-16312108 | MS.gene028206:CDS | 25.0% |
| AAATTAGTTAGGTTTGGACT+TGG | + | chr4.2:16312904-16312923 | None:intergenic | 30.0% | |
| AACAACACAAGAGAAAAACA+TGG | - | chr4.2:16313030-16313049 | MS.gene028206:intron | 30.0% | |
| AAGTTGAATATAGAAGGAAG+TGG | + | chr4.2:16310692-16310711 | None:intergenic | 30.0% | |
| AATTGGATTACGGTTCAAAT+GGG | - | chr4.2:16312213-16312232 | MS.gene028206:CDS | 30.0% | |
| ACAACACAAGAGAAAAACAT+GGG | - | chr4.2:16313031-16313050 | MS.gene028206:intron | 30.0% | |
| ACACAAACAATATCAATCTC+AGG | + | chr4.2:16313379-16313398 | None:intergenic | 30.0% | |
| AGTTTATGTACACAGTGAAA+TGG | - | chr4.2:16310008-16310027 | MS.gene028206:intron | 30.0% | |
| ATAAGAATGTTGTGATGTGT+GGG | - | chr4.2:16312512-16312531 | MS.gene028206:intron | 30.0% | |
| ATATACATCACCAAAACTAC+AGG | + | chr4.2:16312067-16312086 | None:intergenic | 30.0% | |
| ATCCTGAACCTTACTAAATA+TGG | + | chr4.2:16312683-16312702 | None:intergenic | 30.0% | |
| ATTCATGTACTAGTGAGAAT+TGG | - | chr4.2:16312724-16312743 | MS.gene028206:intron | 30.0% | |
| CAAATTCACTTTACTGTCAT+TGG | + | chr4.2:16312986-16313005 | None:intergenic | 30.0% | |
| CAATCACATAAGACAAGATT+AGG | - | chr4.2:16312539-16312558 | MS.gene028206:CDS | 30.0% | |
| CAATGACAGTAAAGTGAATT+TGG | - | chr4.2:16312984-16313003 | MS.gene028206:intron | 30.0% | |
| CAATGTTTAAAAATCTGGAC+CGG | + | chr4.2:16312277-16312296 | None:intergenic | 30.0% | |
| CAGTAAAGTGAATTTGGATA+AGG | - | chr4.2:16312990-16313009 | MS.gene028206:intron | 30.0% | |
| CCTTCTATATTCAACTTGAA+GGG | - | chr4.2:16310695-16310714 | MS.gene028206:intron | 30.0% | |
| GAAAATATTTATACTCGCTC+GGG | + | chr4.2:16309871-16309890 | None:intergenic | 30.0% | |
| GAGGTATGTAACTTATCTTA+TGG | - | chr4.2:16311297-16311316 | MS.gene028206:intron | 30.0% | |
| GATATTGTTTGTGTTTCCAT+AGG | - | chr4.2:16313385-16313404 | MS.gene028206:CDS | 30.0% | |
| GCAGATAAAAATGAAAAACG+AGG | + | chr4.2:16310290-16310309 | None:intergenic | 30.0% | |
| GCCATTAATTAGTTATCACA+TGG | - | chr4.2:16311567-16311586 | MS.gene028206:intron | 30.0% | |
| TAATTGGATTACGGTTCAAA+TGG | - | chr4.2:16312212-16312231 | MS.gene028206:CDS | 30.0% | |
| TATAAGAATGTTGTGATGTG+TGG | - | chr4.2:16312511-16312530 | MS.gene028206:intron | 30.0% | |
| TATTTAGTAAGGTTCAGGAT+AGG | - | chr4.2:16312683-16312702 | MS.gene028206:intron | 30.0% | |
| TCAAACAAATCTCCAAAATC+TGG | + | chr4.2:16312310-16312329 | None:intergenic | 30.0% | |
| TCCTGAACCTTACTAAATAT+GGG | + | chr4.2:16312682-16312701 | None:intergenic | 30.0% | |
| TCCTTCTATATTCAACTTGA+AGG | - | chr4.2:16310694-16310713 | MS.gene028206:intron | 30.0% | |
| TGTGATAACTAATTAATGGC+CGG | + | chr4.2:16311567-16311586 | None:intergenic | 30.0% | |
| TTACTGTCATTGGAAATTTC+TGG | + | chr4.2:16312976-16312995 | None:intergenic | 30.0% | |
| TTCTTCTCATGTCGTTAATT+GGG | - | chr4.2:16311873-16311892 | MS.gene028206:intron | 30.0% | |
| TTTCTTCTCATGTCGTTAAT+TGG | - | chr4.2:16311872-16311891 | MS.gene028206:intron | 30.0% | |
| ! | TCTCCAGTATAATCGAATTT+TGG | - | chr4.2:16311368-16311387 | MS.gene028206:intron | 30.0% |
| ! | TGATACATCTAACCAGATTT+TGG | - | chr4.2:16312295-16312314 | MS.gene028206:CDS | 30.0% |
| ! | TTTAGCTTAGTATAAGGGTA+GGG | - | chr4.2:16312923-16312942 | MS.gene028206:intron | 30.0% |
| ! | TTTTCCATTCTCTTCTCAAA+AGG | + | chr4.2:16310049-16310068 | None:intergenic | 30.0% |
| !! | ACGTTTATTTTCTTGTTGAC+AGG | - | chr4.2:16310793-16310812 | MS.gene028206:intron | 30.0% |
| !! | ATATTCTTTGGTTCTGTATG+TGG | - | chr4.2:16312864-16312883 | MS.gene028206:CDS | 30.0% |
| !! | TATTCCTTTTGAGAAGAGAA+TGG | - | chr4.2:16310042-16310061 | MS.gene028206:intron | 30.0% |
| !! | TATTCTTTGGTTCTGTATGT+GGG | - | chr4.2:16312865-16312884 | MS.gene028206:CDS | 30.0% |
| !!! | CTTAAGGATCAGTTTTAAAG+AGG | - | chr4.2:16312459-16312478 | MS.gene028206:intron | 30.0% |
| !!! | TTTTAGCTTAGTATAAGGGT+AGG | - | chr4.2:16312922-16312941 | MS.gene028206:intron | 30.0% |
| AAACATTTCACATCTCAGGA+AGG | + | chr4.2:16313218-16313237 | None:intergenic | 35.0% | |
| AACACAAGAGAAAAACATGG+GGG | - | chr4.2:16313033-16313052 | MS.gene028206:intron | 35.0% | |
| AACTGTTGACAAAGAAGGAA+AGG | - | chr4.2:16309841-16309860 | MS.gene028206:intron | 35.0% | |
| AAGCAATTGCAACTGTGTTA+AGG | + | chr4.2:16310880-16310899 | None:intergenic | 35.0% | |
| AAGCAGAACATAAGGAAAAG+AGG | + | chr4.2:16310857-16310876 | None:intergenic | 35.0% | |
| AAGGATAACTTCACTATTGC+TGG | + | chr4.2:16312390-16312409 | None:intergenic | 35.0% | |
| ACCCATATTTAGTAAGGTTC+AGG | - | chr4.2:16312678-16312697 | MS.gene028206:intron | 35.0% | |
| AGAAGGGTTAGATTAAATGC+CGG | - | chr4.2:16312616-16312635 | MS.gene028206:CDS | 35.0% | |
| AGCAGAACATAAGGAAAAGA+GGG | + | chr4.2:16310856-16310875 | None:intergenic | 35.0% | |
| AGGATAACTTCACTATTGCT+GGG | + | chr4.2:16312389-16312408 | None:intergenic | 35.0% | |
| ATACATGAGCTCATATCAAC+AGG | + | chr4.2:16313134-16313153 | None:intergenic | 35.0% | |
| ATCGTACATGTCACACTTTA+TGG | + | chr4.2:16312014-16312033 | None:intergenic | 35.0% | |
| ATGCAAACTTCGTTCTTCTT+TGG | - | chr4.2:16313495-16313514 | MS.gene028206:CDS | 35.0% | |
| ATTCCACCTAACACAAGTAA+TGG | + | chr4.2:16310974-16310993 | None:intergenic | 35.0% | |
| ATTCTTATATCTGCCACACA+AGG | + | chr4.2:16312500-16312519 | None:intergenic | 35.0% | |
| ATTGGAACTGTTGACAAAGA+AGG | - | chr4.2:16309836-16309855 | MS.gene028206:intron | 35.0% | |
| CAACACAAGAGAAAAACATG+GGG | - | chr4.2:16313032-16313051 | MS.gene028206:intron | 35.0% | |
| CCAAATAGAGCATGTATTCA+AGG | - | chr4.2:16311977-16311996 | MS.gene028206:CDS | 35.0% | |
| CCAATTAACCAAATTGAACC+AGG | + | chr4.2:16312199-16312218 | None:intergenic | 35.0% | |
| CCTGGTTCAATTTGGTTAAT+TGG | - | chr4.2:16312196-16312215 | MS.gene028206:CDS | 35.0% | |
| CCTTGAATACATGCTCTATT+TGG | + | chr4.2:16311980-16311999 | None:intergenic | 35.0% | |
| CTGAATGAATAAGCGACTTA+AGG | - | chr4.2:16312443-16312462 | MS.gene028206:intron | 35.0% | |
| GCAAATATGGACTTGAACTT+AGG | + | chr4.2:16310407-16310426 | None:intergenic | 35.0% | |
| GCAAGTCATCGTAATACATT+TGG | + | chr4.2:16309802-16309821 | None:intergenic | 35.0% | |
| GTTAGAAACTTATTGCTGAC+AGG | - | chr4.2:16310815-16310834 | MS.gene028206:intron | 35.0% | |
| TACATCAGTTGTGTGTAAAG+TGG | - | chr4.2:16312785-16312804 | MS.gene028206:CDS | 35.0% | |
| TAGTTATCACATGGTCTGTT+AGG | - | chr4.2:16311576-16311595 | MS.gene028206:intron | 35.0% | |
| TATGTACACAGTGAAATGGA+AGG | - | chr4.2:16310012-16310031 | MS.gene028206:intron | 35.0% | |
| TCAACTTGAAGGGACTAATT+GGG | - | chr4.2:16310705-16310724 | MS.gene028206:intron | 35.0% | |
| TGAATACATGCTCTATTTGG+TGG | + | chr4.2:16311977-16311996 | None:intergenic | 35.0% | |
| TGGATAAGGGAATTACTCAA+GGG | - | chr4.2:16313004-16313023 | MS.gene028206:intron | 35.0% | |
| TGTAGATAGTGTAAATCCTG+TGG | + | chr4.2:16311174-16311193 | None:intergenic | 35.0% | |
| TGTCTTCGACTCTATGTAAT+GGG | - | chr4.2:16311610-16311629 | MS.gene028206:intron | 35.0% | |
| TGTTAAGGAAGCAGAACATA+AGG | + | chr4.2:16310865-16310884 | None:intergenic | 35.0% | |
| TTACTACATATCATCTGTGC+CGG | - | chr4.2:16311545-16311564 | MS.gene028206:intron | 35.0% | |
| TTCAACTTGAAGGGACTAAT+TGG | - | chr4.2:16310704-16310723 | MS.gene028206:intron | 35.0% | |
| TTGGATAAGGGAATTACTCA+AGG | - | chr4.2:16313003-16313022 | MS.gene028206:intron | 35.0% | |
| TTGTCTTCGACTCTATGTAA+TGG | - | chr4.2:16311609-16311628 | MS.gene028206:intron | 35.0% | |
| TTTGCAATCACCCATAAGAA+GGG | - | chr4.2:16312600-16312619 | MS.gene028206:CDS | 35.0% | |
| TTTGCGTGATAGTCCTAATA+TGG | - | chr4.2:16310933-16310952 | MS.gene028206:intron | 35.0% | |
| ! | AATTTCTGGATTTGCCCATA+TGG | + | chr4.2:16312962-16312981 | None:intergenic | 35.0% |
| ! | ACTACATTTTTGCTAGTGTC+TGG | - | chr4.2:16311146-16311165 | MS.gene028206:intron | 35.0% |
| ! | ATTTCTGGATTTGCCCATAT+GGG | + | chr4.2:16312961-16312980 | None:intergenic | 35.0% |
| ! | CTACATTTTTGCTAGTGTCT+GGG | - | chr4.2:16311147-16311166 | MS.gene028206:intron | 35.0% |
| ! | GAGATTTGTTTGAAAGCCTT+GGG | - | chr4.2:16312317-16312336 | MS.gene028206:CDS | 35.0% |
| ! | TACATTTTTGCTAGTGTCTG+GGG | - | chr4.2:16311148-16311167 | MS.gene028206:intron | 35.0% |
| ! | TACCTCAATTGTGTTGACAT+GGG | - | chr4.2:16313340-16313359 | MS.gene028206:CDS | 35.0% |
| ! | TACTTCAATGCCTGTAGTTT+TGG | - | chr4.2:16312054-16312073 | MS.gene028206:CDS | 35.0% |
| ! | TCAACTGGCTTATTCATCTA+CGG | - | chr4.2:16313426-16313445 | MS.gene028206:CDS | 35.0% |
| ! | TTACCTCAATTGTGTTGACA+TGG | - | chr4.2:16313339-16313358 | MS.gene028206:CDS | 35.0% |
| ! | TTCCATAGGTCTTTTCTTTG+TGG | - | chr4.2:16313399-16313418 | MS.gene028206:CDS | 35.0% |
| !! | ATTTTTATGCTTGCACTGGT+TGG | - | chr4.2:16310580-16310599 | MS.gene028206:intron | 35.0% |
| !! | CCCTTCAAGTTGAATATAGA+AGG | + | chr4.2:16310698-16310717 | None:intergenic | 35.0% |
| !! | CTTCATTTTTATGCTTGCAC+TGG | - | chr4.2:16310576-16310595 | MS.gene028206:intron | 35.0% |
| AAATAAAGCTCCTCGGTTGT+AGG | + | chr4.2:16310617-16310636 | None:intergenic | 40.0% | |
| AAGGAAGAGGTGGAATTTCT+CGG | + | chr4.2:16311054-16311073 | None:intergenic | 40.0% | |
| AAGTTACCAGCGTCCATATT+AGG | + | chr4.2:16310949-16310968 | None:intergenic | 40.0% | |
| AATAAAGCTCCTCGGTTGTA+GGG | + | chr4.2:16310616-16310635 | None:intergenic | 40.0% | |
| ACACAAGAGAAAAACATGGG+GGG | - | chr4.2:16313034-16313053 | MS.gene028206:CDS | 40.0% | |
| ACTATTGCTGGGTCACAAAT+TGG | + | chr4.2:16312378-16312397 | None:intergenic | 40.0% | |
| ACTTCGCCATTACTTGTGTT+AGG | - | chr4.2:16310965-16310984 | MS.gene028206:intron | 40.0% | |
| AGGAAGAAAGGAGAGAGAAA+AGG | + | chr4.2:16312409-16312428 | None:intergenic | 40.0% | |
| ATCACGCAAATTGTGCCAAA+AGG | + | chr4.2:16310923-16310942 | None:intergenic | 40.0% | |
| CACCACAAAGAAAAGACCTA+TGG | + | chr4.2:16313404-16313423 | None:intergenic | 40.0% | |
| CATCATAAACTCCTGTGTGA+CGG | - | chr4.2:16310120-16310139 | MS.gene028206:intron | 40.0% | |
| CATGAGAAGAAAGAGATGAG+TGG | + | chr4.2:16311864-16311883 | None:intergenic | 40.0% | |
| CTTCTTATGGGTGATTGCAA+AGG | + | chr4.2:16312601-16312620 | None:intergenic | 40.0% | |
| CTTTGCAATCACCCATAAGA+AGG | - | chr4.2:16312599-16312618 | MS.gene028206:CDS | 40.0% | |
| GCAAATTGTGCCAAAAGGAA+GGG | + | chr4.2:16310918-16310937 | None:intergenic | 40.0% | |
| GGACAAACATTTCACATCTC+AGG | + | chr4.2:16313222-16313241 | None:intergenic | 40.0% | |
| GGATAAGGGAATTACTCAAG+GGG | - | chr4.2:16313005-16313024 | MS.gene028206:intron | 40.0% | |
| GGTTAGGGAGTTTATGTGAT+TGG | - | chr4.2:16312344-16312363 | MS.gene028206:CDS | 40.0% | |
| GTAGTACAGCTCTATGTAGA+TGG | + | chr4.2:16311131-16311150 | None:intergenic | 40.0% | |
| GTCATATATGCTCTCACATC+TGG | - | chr4.2:16310649-16310668 | MS.gene028206:intron | 40.0% | |
| GTCTTCGACTCTATGTAATG+GGG | - | chr4.2:16311611-16311630 | MS.gene028206:intron | 40.0% | |
| GTGCAGTAAATAAAGCTCCT+CGG | + | chr4.2:16310624-16310643 | None:intergenic | 40.0% | |
| GTTCCAATAAATCCCCAGAT+TGG | + | chr4.2:16309824-16309843 | None:intergenic | 40.0% | |
| TACGCAAGATCAGATATGTC+TGG | - | chr4.2:16313468-16313487 | MS.gene028206:CDS | 40.0% | |
| TATGGCTTCTTTCTCATGCT+CGG | - | chr4.2:16313537-16313556 | MS.gene028206:CDS | 40.0% | |
| TCTTCGACTCTATGTAATGG+GGG | - | chr4.2:16311612-16311631 | MS.gene028206:intron | 40.0% | |
| TGGACTTGAACTTAGGAAAC+CGG | + | chr4.2:16310400-16310419 | None:intergenic | 40.0% | |
| TTCGTTCTTCTTTGGCTACA+TGG | - | chr4.2:16313503-16313522 | MS.gene028206:CDS | 40.0% | |
| TTCTTCTCTTCCACATCACT+TGG | - | chr4.2:16310081-16310100 | MS.gene028206:intron | 40.0% | |
| TTGCCAATCTGGGGATTTAT+TGG | - | chr4.2:16309818-16309837 | MS.gene028206:intron | 40.0% | |
| TTGCTGCAGAAGATCATGAA+TGG | - | chr4.2:16311269-16311288 | MS.gene028206:intron | 40.0% | |
| ! | AAAGAAAAGACTGAAGCGCT+TGG | - | chr4.2:16309629-16309648 | MS.gene028206:CDS | 40.0% |
| ! | ACACAAAAGTAAGCCTTGTG+TGG | - | chr4.2:16312484-16312503 | MS.gene028206:intron | 40.0% |
| ! | ACAGGATGGAAGTACATTCA+CGG | - | chr4.2:16310365-16310384 | MS.gene028206:intron | 40.0% |
| ! | ATTACGATGACTTGCCAATC+TGG | - | chr4.2:16309807-16309826 | MS.gene028206:CDS | 40.0% |
| ! | CATAGGTCTTTTCTTTGTGG+TGG | - | chr4.2:16313402-16313421 | MS.gene028206:CDS | 40.0% |
| ! | CTATGTAGATGGCACTGAAT+GGG | + | chr4.2:16311120-16311139 | None:intergenic | 40.0% |
| ! | GGAGATTTGTTTGAAAGCCT+TGG | - | chr4.2:16312316-16312335 | MS.gene028206:CDS | 40.0% |
| ! | TCTATGTAGATGGCACTGAA+TGG | + | chr4.2:16311121-16311140 | None:intergenic | 40.0% |
| ! | TTACGATGACTTGCCAATCT+GGG | - | chr4.2:16309808-16309827 | MS.gene028206:CDS | 40.0% |
| !! | AGCTTTATTTACTGCACTCG+TGG | - | chr4.2:16310627-16310646 | MS.gene028206:intron | 40.0% |
| !! | AGTCCTTTTTAACTGCCTCT+CGG | + | chr4.2:16309772-16309791 | None:intergenic | 40.0% |
| !! | GTTCATAAGGAGCACTAACA+AGG | + | chr4.2:16309676-16309695 | None:intergenic | 40.0% |
| !! | TTTCTTTGTGGTGGATCAAC+TGG | - | chr4.2:16313411-16313430 | MS.gene028206:CDS | 40.0% |
| !!! | TCTTCTTTTGACTGGTTTCC+TGG | - | chr4.2:16310144-16310163 | MS.gene028206:intron | 40.0% |
| AAAATCTGGACCGGTTGAAC+CGG | + | chr4.2:16312268-16312287 | None:intergenic | 45.0% | |
| AAAGAAGCCATAGCAGATGC+AGG | + | chr4.2:16313529-16313548 | None:intergenic | 45.0% | |
| AAAGCCTTGGGTGTAGGTTA+GGG | - | chr4.2:16312329-16312348 | MS.gene028206:CDS | 45.0% | |
| AATCAAACCGGCTAGACCTT+CGG | - | chr4.2:16312101-16312120 | MS.gene028206:CDS | 45.0% | |
| ACACATGCTCCTTGATGTTG+AGG | + | chr4.2:16311902-16311921 | None:intergenic | 45.0% | |
| AGGAAGAGGTGGAATTTCTC+GGG | + | chr4.2:16311053-16311072 | None:intergenic | 45.0% | |
| ATGATCAAGAGGAGACAGGA+TGG | - | chr4.2:16310351-16310370 | MS.gene028206:intron | 45.0% | |
| ATTGCTGGGTCACAAATTGG+AGG | + | chr4.2:16312375-16312394 | None:intergenic | 45.0% | |
| CAAAAGAAGAACCGTCACAC+AGG | + | chr4.2:16310134-16310153 | None:intergenic | 45.0% | |
| CACATCACTTGGAGATTCAC+TGG | - | chr4.2:16310092-16310111 | MS.gene028206:intron | 45.0% | |
| CACATGCTCCTTGATGTTGA+GGG | + | chr4.2:16311901-16311920 | None:intergenic | 45.0% | |
| CACTTGGGGTTTCTGATCAT+AGG | - | chr4.2:16313076-16313095 | MS.gene028206:CDS | 45.0% | |
| CAGAAGATCATGAATGGTGG+TGG | - | chr4.2:16311275-16311294 | MS.gene028206:intron | 45.0% | |
| CAGAGTGAATAACTGAGTGC+CGG | + | chr4.2:16310444-16310463 | None:intergenic | 45.0% | |
| CAGTGAATCTCCAAGTGATG+TGG | + | chr4.2:16310094-16310113 | None:intergenic | 45.0% | |
| CGCAAATTGTGCCAAAAGGA+AGG | + | chr4.2:16310919-16310938 | None:intergenic | 45.0% | |
| CGGTTCAACCTGGTTCAATT+TGG | - | chr4.2:16312188-16312207 | MS.gene028206:CDS | 45.0% | |
| CGTCACACAGGAGTTTATGA+TGG | + | chr4.2:16310122-16310141 | None:intergenic | 45.0% | |
| CTATGATCAGAAACCCCAAG+TGG | + | chr4.2:16313078-16313097 | None:intergenic | 45.0% | |
| CTCCCATGTCAACACAATTG+AGG | + | chr4.2:16313345-16313364 | None:intergenic | 45.0% | |
| CTCGGGGATATTTAGTAGTG+CGG | + | chr4.2:16311036-16311055 | None:intergenic | 45.0% | |
| CTGCAGAAGATCATGAATGG+TGG | - | chr4.2:16311272-16311291 | MS.gene028206:intron | 45.0% | |
| CTTCAAGACACGCATGAGAA+TGG | + | chr4.2:16310173-16310192 | None:intergenic | 45.0% | |
| CTTGTGTTAGGTGGAATTGC+AGG | - | chr4.2:16310977-16310996 | MS.gene028206:intron | 45.0% | |
| GAGAAATTCCACCTCTTCCT+TGG | - | chr4.2:16311053-16311072 | MS.gene028206:intron | 45.0% | |
| GATAGTCCTAATATGGACGC+TGG | - | chr4.2:16310940-16310959 | MS.gene028206:intron | 45.0% | |
| GATTGAAATCAGTGCCCGTA+TGG | - | chr4.2:16309937-16309956 | MS.gene028206:intron | 45.0% | |
| GCAAGTTAATCAGTTCCGAG+AGG | - | chr4.2:16309754-16309773 | MS.gene028206:CDS | 45.0% | |
| GCCATGGTATCAACCCATAT+GGG | - | chr4.2:16312945-16312964 | MS.gene028206:intron | 45.0% | |
| GGATATTTAGTAGTGCGGAC+AGG | + | chr4.2:16311031-16311050 | None:intergenic | 45.0% | |
| GGGTGATTGCAAAGGTCATT+TGG | + | chr4.2:16312593-16312612 | None:intergenic | 45.0% | |
| GTATTCTATCCCTACAACCG+AGG | - | chr4.2:16310604-16310623 | MS.gene028206:intron | 45.0% | |
| GTTCAATTAGCGGTTCAACC+TGG | - | chr4.2:16312178-16312197 | MS.gene028206:CDS | 45.0% | |
| GTTCCGAGAGGCAGTTAAAA+AGG | - | chr4.2:16309766-16309785 | MS.gene028206:CDS | 45.0% | |
| TCAGGTCAACCACAGAATGA+GGG | + | chr4.2:16309964-16309983 | None:intergenic | 45.0% | |
| TCGCCATTACTTGTGTTAGG+TGG | - | chr4.2:16310968-16310987 | MS.gene028206:intron | 45.0% | |
| TCTTTGTCCGCCACATATAC+CGG | - | chr4.2:16313586-16313605 | MS.gene028206:CDS | 45.0% | |
| TGTTTGAAAGCCTTGGGTGT+AGG | - | chr4.2:16312323-16312342 | MS.gene028206:CDS | 45.0% | |
| TTAGTATAAGGGTAGGGCCA+TGG | - | chr4.2:16312929-16312948 | MS.gene028206:intron | 45.0% | |
| TTCCTCGTCTTGAGCATATC+TGG | + | chr4.2:16310324-16310343 | None:intergenic | 45.0% | |
| ! | ACATTCACGGCGATGTTTTC+CGG | - | chr4.2:16310378-16310397 | MS.gene028206:intron | 45.0% |
| ! | ACTTGATGGACCGGTATATG+TGG | + | chr4.2:16313599-16313618 | None:intergenic | 45.0% |
| ! | CTTCGACTCTATGTAATGGG+GGG | - | chr4.2:16311613-16311632 | MS.gene028206:intron | 45.0% |
| ! | GTACTAGTGAGAATTGGCTC+TGG | - | chr4.2:16312730-16312749 | MS.gene028206:intron | 45.0% |
| ! | GTCTTTTCTTTCTCGTGACC+TGG | + | chr4.2:16309620-16309639 | None:intergenic | 45.0% |
| ! | GTGACGGTTCTTCTTTTGAC+TGG | - | chr4.2:16310136-16310155 | MS.gene028206:intron | 45.0% |
| ! | TACGATGACTTGCCAATCTG+GGG | - | chr4.2:16309809-16309828 | MS.gene028206:CDS | 45.0% |
| ! | TTCGACTCTATGTAATGGGG+GGG | - | chr4.2:16311614-16311633 | MS.gene028206:intron | 45.0% |
| !! | AAGATCATGAATGGTGGTGG+AGG | - | chr4.2:16311278-16311297 | MS.gene028206:intron | 45.0% |
| AAACCCTGCCATTGCCATCT+GGG | + | chr4.2:16311095-16311114 | None:intergenic | 50.0% | |
| AAATCTGGACCGGTTGAACC+GGG | + | chr4.2:16312267-16312286 | None:intergenic | 50.0% | |
| AACTCCCTAACCTACACCCA+AGG | + | chr4.2:16312336-16312355 | None:intergenic | 50.0% | |
| ACCAAGGGCAGCTGCAAATA+TGG | + | chr4.2:16310420-16310439 | None:intergenic | 50.0% | |
| ATCAAACCGGCTAGACCTTC+GGG | - | chr4.2:16312102-16312121 | MS.gene028206:CDS | 50.0% | |
| ATTGGGCTCCCTCAACATCA+AGG | - | chr4.2:16311890-16311909 | MS.gene028206:intron | 50.0% | |
| CACAGAATGAGGGTCCATAC+GGG | + | chr4.2:16309954-16309973 | None:intergenic | 50.0% | |
| CACCAGATATGCTCAAGACG+AGG | - | chr4.2:16310319-16310338 | MS.gene028206:intron | 50.0% | |
| CCACAGAATGAGGGTCCATA+CGG | + | chr4.2:16309955-16309974 | None:intergenic | 50.0% | |
| CGTCACTGCTTTCATCACTG+TGG | - | chr4.2:16311228-16311247 | MS.gene028206:intron | 50.0% | |
| CTGCAAGAAGACGCTCACAA+GGG | - | chr4.2:16309730-16309749 | MS.gene028206:CDS | 50.0% | |
| GAAAAACATGGGGGGACTTG+AGG | - | chr4.2:16313042-16313061 | MS.gene028206:CDS | 50.0% | |
| GAAAGCCTTGGGTGTAGGTT+AGG | - | chr4.2:16312328-16312347 | MS.gene028206:CDS | 50.0% | |
| GCTGATGATCAAGAGGAGAC+AGG | - | chr4.2:16310347-16310366 | MS.gene028206:intron | 50.0% | |
| GGAAAAGAGGGCCACAAAAG+AGG | + | chr4.2:16310844-16310863 | None:intergenic | 50.0% | |
| GGAAGAGGTGGAATTTCTCG+GGG | + | chr4.2:16311052-16311071 | None:intergenic | 50.0% | |
| GGAAGCTGCTGATGATCAAG+AGG | - | chr4.2:16310340-16310359 | MS.gene028206:intron | 50.0% | |
| GGCCATGGTATCAACCCATA+TGG | - | chr4.2:16312944-16312963 | MS.gene028206:intron | 50.0% | |
| GTCAGGTCAACCACAGAATG+AGG | + | chr4.2:16309965-16309984 | None:intergenic | 50.0% | |
| GTTTGAACCAACCAGTGCAC+AGG | - | chr4.2:16312235-16312254 | MS.gene028206:CDS | 50.0% | |
| TACATGGCCTGCATCTGCTA+TGG | - | chr4.2:16313519-16313538 | MS.gene028206:CDS | 50.0% | |
| TCCATATTTGCAGCTGCCCT+TGG | - | chr4.2:16310416-16310435 | MS.gene028206:intron | 50.0% | |
| TCTGCAAGAAGACGCTCACA+AGG | - | chr4.2:16309729-16309748 | MS.gene028206:CDS | 50.0% | |
| TTCCACCTCTTCCTTGGTAC+AGG | - | chr4.2:16311059-16311078 | MS.gene028206:intron | 50.0% | |
| TTCTGTGGTTGACCTGACTG+AGG | - | chr4.2:16309967-16309986 | MS.gene028206:intron | 50.0% | |
| TTTCTCATGCTCGGTAGCGT+AGG | - | chr4.2:16313546-16313565 | MS.gene028206:CDS | 50.0% | |
| ! | AAAGACTGAAGCGCTTGGTG+AGG | - | chr4.2:16309634-16309653 | MS.gene028206:CDS | 50.0% |
| ! | CTGACAGGATGCCTCTTTTG+TGG | - | chr4.2:16310830-16310849 | MS.gene028206:intron | 50.0% |
| ! | GCTCTCACATCTGGAATTGC+TGG | - | chr4.2:16310658-16310677 | MS.gene028206:intron | 50.0% |
| ! | TCGACTCTATGTAATGGGGG+GGG | - | chr4.2:16311615-16311634 | MS.gene028206:intron | 50.0% |
| ! | TGATGGACCGGTATATGTGG+CGG | + | chr4.2:16313596-16313615 | None:intergenic | 50.0% |
| !! | ATAACTGAGTGCCGGAACCA+AGG | + | chr4.2:16310436-16310455 | None:intergenic | 50.0% |
| !! | ATATGTGGCGGACAAAGAGC+AGG | + | chr4.2:16313584-16313603 | None:intergenic | 50.0% |
| !! | GCCCATATGGGTTGATACCA+TGG | + | chr4.2:16312949-16312968 | None:intergenic | 50.0% |
| !! | TAACTGAGTGCCGGAACCAA+GGG | + | chr4.2:16310435-16310454 | None:intergenic | 50.0% |
| !! | TATGTGGCGGACAAAGAGCA+GGG | + | chr4.2:16313583-16313602 | None:intergenic | 50.0% |
| AACCCTGCCATTGCCATCTG+GGG | + | chr4.2:16311094-16311113 | None:intergenic | 55.0% | |
| ATTCCCCAGATGGCAATGGC+AGG | - | chr4.2:16311088-16311107 | MS.gene028206:intron | 55.0% | |
| CACCATTCCCCAGATGGCAA+TGG | - | chr4.2:16311084-16311103 | MS.gene028206:intron | 55.0% | |
| CACGCATGAGAATGGTTGCC+AGG | + | chr4.2:16310165-16310184 | None:intergenic | 55.0% | |
| CAGTTCAACCATCACCCCGA+AGG | + | chr4.2:16312120-16312139 | None:intergenic | 55.0% | |
| CCGTATGGACCCTCATTCTG+TGG | - | chr4.2:16309952-16309971 | MS.gene028206:intron | 55.0% | |
| CTCCTGTACCAAGGAAGAGG+TGG | + | chr4.2:16311064-16311083 | None:intergenic | 55.0% | |
| GAAACCCTGCCATTGCCATC+TGG | + | chr4.2:16311096-16311115 | None:intergenic | 55.0% | |
| GATCAGAAACCCCAAGTGGC+AGG | + | chr4.2:16313074-16313093 | None:intergenic | 55.0% | |
| GGAATGGTGCTCCTGTACCA+AGG | + | chr4.2:16311073-16311092 | None:intergenic | 55.0% | |
| GGTTGACCTGACTGAGGACA+GGG | - | chr4.2:16309973-16309992 | MS.gene028206:intron | 55.0% | |
| GTGCTCCTGTACCAAGGAAG+AGG | + | chr4.2:16311067-16311086 | None:intergenic | 55.0% | |
| TAGTAGTGCGGACAGGTGCT+TGG | + | chr4.2:16311024-16311043 | None:intergenic | 55.0% | |
| TCAAACCGGCTAGACCTTCG+GGG | - | chr4.2:16312103-16312122 | MS.gene028206:CDS | 55.0% | |
| TGCCATTGCCATCTGGGGAA+TGG | + | chr4.2:16311089-16311108 | None:intergenic | 55.0% | |
| TGGTTGACCTGACTGAGGAC+AGG | - | chr4.2:16309972-16309991 | MS.gene028206:intron | 55.0% | |
| TTCCCCAGATGGCAATGGCA+GGG | - | chr4.2:16311089-16311108 | MS.gene028206:intron | 55.0% | |
| TTTGCAGCTGCCCTTGGTTC+CGG | - | chr4.2:16310422-16310441 | MS.gene028206:intron | 55.0% | |
| ! | ACTCTATGTAATGGGGGGGG+GGG | - | chr4.2:16311618-16311637 | MS.gene028206:intron | 55.0% |
| ! | CGACTCTATGTAATGGGGGG+GGG | - | chr4.2:16311616-16311635 | MS.gene028206:intron | 55.0% |
| ! | CTTCGGGGTGATGGTTGAAC+TGG | - | chr4.2:16312118-16312137 | MS.gene028206:CDS | 55.0% |
| ! | GACTCTATGTAATGGGGGGG+GGG | - | chr4.2:16311617-16311636 | MS.gene028206:intron | 55.0% |
| ! | GCAACTGCTGCCCTTCCTTT+TGG | - | chr4.2:16310905-16310924 | MS.gene028206:intron | 55.0% |
| !! | GCGCTTGGTGAGGTGTTGAA+TGG | - | chr4.2:16309644-16309663 | MS.gene028206:CDS | 55.0% |
| AAACCCCAAGTGGCAGGCCA+AGG | + | chr4.2:16313068-16313087 | None:intergenic | 60.0% | |
| AGGCTGCTTCCCGGTTCAAC+CGG | - | chr4.2:16312255-16312274 | MS.gene028206:CDS | 60.0% | |
| CATCACCCCGAAGGTCTAGC+CGG | + | chr4.2:16312111-16312130 | None:intergenic | 60.0% | |
| CCACTTCCCTGTCCTCAGTC+AGG | + | chr4.2:16309982-16310001 | None:intergenic | 60.0% | |
| CCTGACTGAGGACAGGGAAG+TGG | - | chr4.2:16309979-16309998 | MS.gene028206:intron | 60.0% | |
| GGACAAAGAGCAGGGAGGCA+CGG | + | chr4.2:16313575-16313594 | None:intergenic | 60.0% | |
| ! | CTCTATGTAATGGGGGGGGG+GGG | - | chr4.2:16311619-16311638 | MS.gene028206:intron | 60.0% |
| ! | GAAGCAGCCTGTGCACTGGT+TGG | + | chr4.2:16312245-16312264 | None:intergenic | 60.0% |
| ! | TCTATGTAATGGGGGGGGGG+GGG | - | chr4.2:16311620-16311639 | MS.gene028206:intron | 60.0% |
| ! | TTGCTAGTGTCTGGGGCCAC+AGG | - | chr4.2:16311155-16311174 | MS.gene028206:intron | 60.0% |
| !! | CAGGAGCACCATTCCCCAGA+TGG | - | chr4.2:16311078-16311097 | MS.gene028206:intron | 60.0% |
| CATGGGGGGACTTGAGGCCT+TGG | - | chr4.2:16313048-16313067 | MS.gene028206:CDS | 65.0% | |
| CCAGTGCACAGGCTGCTTCC+CGG | - | chr4.2:16312246-16312265 | MS.gene028206:CDS | 65.0% | |
| CGGCTAGACCTTCGGGGTGA+TGG | - | chr4.2:16312109-16312128 | MS.gene028206:CDS | 65.0% | |
| TGAGGCCTTGGCCTGCCACT+TGG | - | chr4.2:16313060-16313079 | MS.gene028206:CDS | 65.0% | |
| ! | AGGCCTTGGCCTGCCACTTG+GGG | - | chr4.2:16313062-16313081 | MS.gene028206:CDS | 65.0% |
| ! | CTATGTAATGGGGGGGGGGG+GGG | - | chr4.2:16311621-16311640 | MS.gene028206:intron | 65.0% |
| ! | GAGGCCTTGGCCTGCCACTT+GGG | - | chr4.2:16313061-16313080 | MS.gene028206:CDS | 65.0% |
| ! | TATGTAATGGGGGGGGGGGG+GGG | - | chr4.2:16311622-16311641 | MS.gene028206:intron | 65.0% |
| !! | GTGGCGGACAAAGAGCAGGG+AGG | + | chr4.2:16313580-16313599 | None:intergenic | 65.0% |
| CCGGGAAGCAGCCTGTGCAC+TGG | + | chr4.2:16312249-16312268 | None:intergenic | 70.0% | |
| ! | ATGTAATGGGGGGGGGGGGG+GGG | - | chr4.2:16311623-16311642 | MS.gene028206:intron | 70.0% |
| ! | TGTAATGGGGGGGGGGGGGG+GGG | - | chr4.2:16311624-16311643 | MS.gene028206:intron | 75.0% |
| ! | TAATGGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311626-16311645 | MS.gene028206:intron | 80.0% |
| !! | GTAATGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311625-16311644 | MS.gene028206:intron | 80.0% |
| ! | AATGGGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311627-16311646 | MS.gene028206:intron | 85.0% |
| ! | ATGGGGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311628-16311647 | MS.gene028206:intron | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.2:16311629-16311648 | MS.gene028206:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 16309614 | 16313626 | 16309614 | ID=MS.gene028206 |
| chr4.2 | mRNA | 16309614 | 16313626 | 16309614 | ID=MS.gene028206.t1;Parent=MS.gene028206 |
| chr4.2 | exon | 16313034 | 16313626 | 16313034 | ID=MS.gene028206.t1.exon1;Parent=MS.gene028206.t1 |
| chr4.2 | CDS | 16313034 | 16313626 | 16313034 | ID=cds.MS.gene028206.t1;Parent=MS.gene028206.t1 |
| chr4.2 | exon | 16312778 | 16312915 | 16312778 | ID=MS.gene028206.t1.exon2;Parent=MS.gene028206.t1 |
| chr4.2 | CDS | 16312778 | 16312915 | 16312778 | ID=cds.MS.gene028206.t1;Parent=MS.gene028206.t1 |
| chr4.2 | exon | 16312514 | 16312670 | 16312514 | ID=MS.gene028206.t1.exon3;Parent=MS.gene028206.t1 |
| chr4.2 | CDS | 16312514 | 16312670 | 16312514 | ID=cds.MS.gene028206.t1;Parent=MS.gene028206.t1 |
| chr4.2 | exon | 16311941 | 16312425 | 16311941 | ID=MS.gene028206.t1.exon4;Parent=MS.gene028206.t1 |
| chr4.2 | CDS | 16311941 | 16312425 | 16311941 | ID=cds.MS.gene028206.t1;Parent=MS.gene028206.t1 |
| chr4.2 | exon | 16309614 | 16309833 | 16309614 | ID=MS.gene028206.t1.exon5;Parent=MS.gene028206.t1 |
| chr4.2 | CDS | 16309614 | 16309833 | 16309614 | ID=cds.MS.gene028206.t1;Parent=MS.gene028206.t1 |
| Gene Sequence |
| Protein sequence |
