Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34981.t1 | RHN42310.1 | 99.7 | 587 | 2 | 0 | 4 | 590 | 5 | 591 | 0.00E+00 | 1145.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34981.t1 | Q9ZPS7 | 89.1 | 586 | 63 | 1 | 5 | 590 | 8 | 592 | 2.4e-296 | 1018.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34981.t1 | A0A396GMP8 | 99.7 | 587 | 2 | 0 | 4 | 590 | 5 | 591 | 0.0e+00 | 1145.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene34981 | -0.807293 | 5.43E-50 | -1.69E-46 |
| MS.gene049195 | MS.gene34981 | -0.810486 | 1.13E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene34981 | -0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene34981 | -0.811761 | 5.96E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene34981 | -0.807299 | 5.41E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene34981 | -0.827553 | 1.47E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene34981 | -0.812483 | 4.14E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene34981 | -0.819062 | 1.41E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene34981 | -0.813531 | 2.44E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene34981 | 0.825127 | 5.55E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene34981 | -0.801104 | 1.05E-48 | -1.69E-46 |
| MS.gene050464 | MS.gene34981 | -0.846071 | 2.73E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene34981 | -0.811831 | 5.75E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene34981 | 0.843758 | 1.15E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene34981 | -0.82707 | 1.92E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene34981 | -0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene34981 | -0.802312 | 5.96E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene34981 | 0.830874 | 2.30E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene34981 | -0.84444 | 7.55E-59 | -1.69E-46 |
| MS.gene051983 | MS.gene34981 | -0.869014 | 4.25E-66 | -1.69E-46 |
| MS.gene052077 | MS.gene34981 | -0.84542 | 4.11E-59 | -1.69E-46 |
| MS.gene052309 | MS.gene34981 | 0.872396 | 3.29E-67 | -1.69E-46 |
| MS.gene053836 | MS.gene34981 | -0.861184 | 1.23E-63 | -1.69E-46 |
| MS.gene054183 | MS.gene34981 | -0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene34981 | -0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene34981 | -0.834772 | 2.47E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene34981 | -0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene34981 | -0.828579 | 8.31E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene34981 | -0.807648 | 4.56E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene34981 | -0.821712 | 3.49E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene34981 | -0.816556 | 5.20E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene34981 | -0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene34981 | -0.812545 | 4.02E-51 | -1.69E-46 |
| MS.gene056899 | MS.gene34981 | 0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene056979 | MS.gene34981 | -0.868252 | 7.50E-66 | -1.69E-46 |
| MS.gene057121 | MS.gene34981 | -0.812176 | 4.84E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene34981 | -0.805807 | 1.12E-49 | -1.69E-46 |
| MS.gene057971 | MS.gene34981 | -0.803662 | 3.13E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene34981 | -0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene059609 | MS.gene34981 | -0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene34981 | -0.812451 | 4.21E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene34981 | -0.803896 | 2.80E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene34981 | 0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene34981 | 0.829834 | 4.12E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene34981 | -0.827159 | 1.82E-54 | -1.69E-46 |
| MS.gene061114 | MS.gene34981 | 0.865552 | 5.44E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34981 | MS.gene047189 | PPI |
| MS.gene023251 | MS.gene34981 | PPI |
| MS.gene34981 | MS.gene072047 | PPI |
| MS.gene002060 | MS.gene34981 | PPI |
| MS.gene34981 | MS.gene028206 | PPI |
| MS.gene34981 | MS.gene023251 | PPI |
| MS.gene34981 | MS.gene08367 | PPI |
| MS.gene34981 | MS.gene00630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34981.t1 | MTR_6g074910 | 87.263 | 581 | 73 | 1 | 10 | 590 | 9 | 588 | 0.0 | 1042 |
| MS.gene34981.t1 | MTR_5g077170 | 76.884 | 584 | 134 | 1 | 8 | 590 | 8 | 591 | 0.0 | 947 |
| MS.gene34981.t1 | MTR_4g053270 | 48.443 | 578 | 287 | 4 | 17 | 590 | 19 | 589 | 0.0 | 570 |
| MS.gene34981.t1 | MTR_8g088730 | 41.075 | 577 | 323 | 7 | 22 | 590 | 22 | 589 | 2.61e-148 | 440 |
| MS.gene34981.t1 | MTR_2g006300 | 41.565 | 575 | 321 | 7 | 22 | 590 | 18 | 583 | 1.12e-147 | 438 |
| MS.gene34981.t1 | MTR_8g016270 | 34.918 | 610 | 343 | 7 | 29 | 590 | 45 | 648 | 1.08e-126 | 387 |
| MS.gene34981.t1 | MTR_1g014080 | 33.117 | 616 | 356 | 9 | 24 | 590 | 29 | 637 | 1.93e-114 | 355 |
| MS.gene34981.t1 | MTR_3g105950 | 33.224 | 608 | 350 | 8 | 32 | 590 | 36 | 636 | 3.66e-113 | 351 |
| MS.gene34981.t1 | MTR_5g098730 | 27.074 | 639 | 376 | 16 | 27 | 590 | 42 | 665 | 6.23e-75 | 252 |
| MS.gene34981.t1 | MTR_0204s0010 | 30.088 | 452 | 293 | 9 | 154 | 590 | 5 | 448 | 1.27e-72 | 240 |
| MS.gene34981.t1 | MTR_3g082140 | 26.019 | 638 | 384 | 15 | 27 | 590 | 36 | 659 | 1.30e-72 | 245 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34981.t1 | AT2G01970 | 89.078 | 586 | 63 | 1 | 5 | 590 | 8 | 592 | 0.0 | 1061 |
| MS.gene34981.t1 | AT1G14670 | 89.043 | 575 | 63 | 0 | 16 | 590 | 18 | 592 | 0.0 | 1028 |
| MS.gene34981.t1 | AT5G37310 | 82.842 | 577 | 99 | 0 | 14 | 590 | 17 | 593 | 0.0 | 981 |
| MS.gene34981.t1 | AT5G37310 | 82.842 | 577 | 99 | 0 | 14 | 590 | 17 | 593 | 0.0 | 981 |
| MS.gene34981.t1 | AT1G08350 | 50.171 | 586 | 284 | 6 | 8 | 590 | 9 | 589 | 0.0 | 612 |
| MS.gene34981.t1 | AT1G08350 | 50.171 | 586 | 284 | 6 | 8 | 590 | 9 | 589 | 0.0 | 612 |
| MS.gene34981.t1 | AT1G08350 | 49.023 | 512 | 254 | 5 | 82 | 590 | 1 | 508 | 0.0 | 526 |
| MS.gene34981.t1 | AT1G08350 | 49.027 | 514 | 255 | 5 | 8 | 518 | 9 | 518 | 0.0 | 523 |
| MS.gene34981.t1 | AT1G10950 | 40.210 | 572 | 327 | 7 | 25 | 590 | 27 | 589 | 2.88e-143 | 427 |
| MS.gene34981.t1 | AT3G13772 | 33.117 | 616 | 346 | 9 | 29 | 590 | 38 | 641 | 3.64e-119 | 367 |
| MS.gene34981.t1 | AT1G55130 | 33.770 | 610 | 350 | 8 | 29 | 590 | 34 | 637 | 1.37e-117 | 363 |
| MS.gene34981.t1 | AT2G24170 | 34.267 | 607 | 345 | 9 | 32 | 590 | 37 | 637 | 9.80e-117 | 360 |
| MS.gene34981.t1 | AT5G10840 | 32.683 | 615 | 359 | 9 | 25 | 590 | 40 | 648 | 4.51e-114 | 354 |
| MS.gene34981.t1 | AT5G25100 | 32.362 | 618 | 359 | 9 | 25 | 590 | 34 | 644 | 2.65e-113 | 352 |
| MS.gene34981.t1 | AT5G25100 | 32.733 | 611 | 352 | 9 | 32 | 590 | 48 | 651 | 8.20e-113 | 351 |
| MS.gene34981.t1 | AT5G35160 | 27.230 | 639 | 378 | 16 | 27 | 590 | 32 | 658 | 4.46e-75 | 252 |
| MS.gene34981.t1 | AT5G35160 | 27.230 | 639 | 378 | 16 | 27 | 590 | 32 | 658 | 4.46e-75 | 252 |
| MS.gene34981.t1 | AT5G35160 | 27.230 | 639 | 378 | 16 | 27 | 590 | 32 | 658 | 4.46e-75 | 252 |
| MS.gene34981.t1 | AT5G35160 | 27.379 | 599 | 350 | 14 | 66 | 590 | 43 | 630 | 3.21e-71 | 241 |
| MS.gene34981.t1 | AT4G12650 | 25.949 | 632 | 392 | 14 | 27 | 590 | 29 | 652 | 1.35e-68 | 234 |
| MS.gene34981.t1 | AT2G24170 | 30.266 | 413 | 235 | 8 | 32 | 396 | 37 | 444 | 2.07e-59 | 205 |
Find 148 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTTGAAGGGACTAAT+TGG | 0.200318 | 4.4:-18081079 | MS.gene34981:CDS |
| TTGCCAATCTGGGGATTTAT+TGG | 0.213909 | 4.4:-18081965 | MS.gene34981:CDS |
| GTGAAAGGGACCGACTTTAT+TGG | 0.261642 | 4.4:+18083725 | None:intergenic |
| ACCAAGGGCAGCTGCAAATA+TGG | 0.266358 | 4.4:+18081366 | None:intergenic |
| GCAACTGCTGCCCTTCCTTT+TGG | 0.272026 | 4.4:-18080877 | MS.gene34981:CDS |
| GACCTTCCATTCTGTGTAAC+AGG | 0.280564 | 4.4:-18083495 | MS.gene34981:intron |
| ATGCAAACTTCGTTCTTCTT+TGG | 0.295356 | 4.4:-18078295 | MS.gene34981:CDS |
| AAGTTACCAGCGTCCATATT+AGG | 0.305475 | 4.4:+18080836 | None:intergenic |
| TTTCTTTGTGGTGGATCAAC+TGG | 0.306655 | 4.4:-18078379 | MS.gene34981:CDS |
| TTTGCGTGATAGTCCTAATA+TGG | 0.324378 | 4.4:-18080849 | MS.gene34981:CDS |
| GCAAGTCATCGTAATACATT+TGG | 0.331551 | 4.4:+18081984 | None:intergenic |
| TTTGCAGCTGCCCTTGGTTC+CGG | 0.340488 | 4.4:-18081361 | MS.gene34981:CDS |
| GCTCTCACATCTGGAATTGC+TGG | 0.344836 | 4.4:-18081125 | MS.gene34981:CDS |
| CCACAACTACTCACACTTGA+TGG | 0.349739 | 4.4:+18078180 | None:intergenic |
| GTTCCGAGAGGCAGTTAAAA+AGG | 0.354365 | 4.4:-18082017 | MS.gene34981:CDS |
| ATTACGATGACTTGCCAATC+TGG | 0.360772 | 4.4:-18081976 | MS.gene34981:CDS |
| GTCATATATGCTCTCACATC+TGG | 0.374176 | 4.4:-18081134 | MS.gene34981:CDS |
| AAATGGGAAGAAGTGTCTTA+TGG | 0.378574 | 4.4:-18083842 | MS.gene34981:CDS |
| GAAACCCTGCCATTGCCATC+TGG | 0.384130 | 4.4:+18080689 | None:intergenic |
| TCCTTCTATATTCAACTTGA+AGG | 0.387134 | 4.4:-18081089 | MS.gene34981:CDS |
| AAATAAAGCTCCTCGGTTGT+AGG | 0.389595 | 4.4:+18081169 | None:intergenic |
| CTTGTGTTAGGTGGAATTGC+AGG | 0.390339 | 4.4:-18080805 | MS.gene34981:CDS |
| CACATCACTTGGAGATTCAC+TGG | 0.393428 | 4.4:-18081691 | MS.gene34981:CDS |
| CCCTTCAAGTTGAATATAGA+AGG | 0.401751 | 4.4:+18081088 | None:intergenic |
| GCAAATATGGACTTGAACTT+AGG | 0.402386 | 4.4:+18081379 | None:intergenic |
| TCCATATTTGCAGCTGCCCT+TGG | 0.404556 | 4.4:-18081367 | MS.gene34981:CDS |
| TTCGTTCTTCTTTGGCTACA+TGG | 0.414161 | 4.4:-18078287 | MS.gene34981:CDS |
| ACTTCGCCATTACTTGTGTT+AGG | 0.433145 | 4.4:-18080817 | MS.gene34981:CDS |
| GAGAAATTCCACCTCTTCCT+TGG | 0.435711 | 4.4:-18080729 | MS.gene34981:CDS |
| GAAAATATTTATACTCGCTC+GGG | 0.436229 | 4.4:+18081915 | None:intergenic |
| ATTGGAACTGTTGACAAAGA+AGG | 0.436776 | 4.4:-18081947 | MS.gene34981:CDS |
| AGAAAATATTTATACTCGCT+CGG | 0.436979 | 4.4:+18081914 | None:intergenic |
| AGTTTATGTACACAGTGAAA+TGG | 0.441672 | 4.4:-18081775 | MS.gene34981:CDS |
| AAGGAAGAGGTGGAATTTCT+CGG | 0.444124 | 4.4:+18080731 | None:intergenic |
| AATTTACCTGTTACACAGAA+TGG | 0.444335 | 4.4:+18083489 | None:intergenic |
| AAGCGATTGCAACTGTGTTA+AGG | 0.450571 | 4.4:+18080905 | None:intergenic |
| TTCTTCTCTTCCACATCACT+TGG | 0.450920 | 4.4:-18081702 | MS.gene34981:CDS |
| CGCAAATTGTGCCAAAAGGA+AGG | 0.452498 | 4.4:+18080866 | None:intergenic |
| TTGCTAGTGTCTGGGGCCAC+AGG | 0.452557 | 4.4:-18080627 | MS.gene34981:CDS |
| AAACCCTGCCATTGCCATCT+GGG | 0.456769 | 4.4:+18080690 | None:intergenic |
| AGGAAGAGGTGGAATTTCTC+GGG | 0.456787 | 4.4:+18080732 | None:intergenic |
| CACGCATGAGAATGGTTGCC+AGG | 0.459320 | 4.4:+18081621 | None:intergenic |
| TGGACTTGAACTTAGGAAAC+CGG | 0.463443 | 4.4:+18081386 | None:intergenic |
| TTCCACCTCTTCCTTGGTAC+AGG | 0.464858 | 4.4:-18080723 | MS.gene34981:CDS |
| CTTCAAGACACGCATGAGAA+TGG | 0.465748 | 4.4:+18081613 | None:intergenic |
| TCAACTTGAAGGGACTAATT+GGG | 0.473972 | 4.4:-18081078 | MS.gene34981:intron |
| GTAGTACAGCTCTATGTAGA+TGG | 0.476433 | 4.4:+18080654 | None:intergenic |
| TGCCATTGCCATCTGGGGAA+TGG | 0.478930 | 4.4:+18080696 | None:intergenic |
| CCACTTCCCTGTCCTCAGTC+AGG | 0.480439 | 4.4:+18081804 | None:intergenic |
| ATTCCCCAGATGGCAATGGC+AGG | 0.485795 | 4.4:-18080694 | MS.gene34981:CDS |
| TATGGCTTCTTTCTCATGCT+CGG | 0.487027 | 4.4:-18078253 | MS.gene34981:CDS |
| TGTTAAGGAAGCAGAACATA+AGG | 0.488623 | 4.4:+18080920 | None:intergenic |
| CTATGTAGATGGCACTGAAT+GGG | 0.490420 | 4.4:+18080665 | None:intergenic |
| TACATGGCCTGCATCTGCTA+TGG | 0.491443 | 4.4:-18078271 | MS.gene34981:CDS |
| TTACGATGACTTGCCAATCT+GGG | 0.494168 | 4.4:-18081975 | MS.gene34981:CDS |
| AATAAAGCTCCTCGGTTGTA+GGG | 0.495013 | 4.4:+18081170 | None:intergenic |
| GTCAGGTCAACCACAGAATG+AGG | 0.499157 | 4.4:+18081821 | None:intergenic |
| CCGACTTTATTGGCGTAAAG+AGG | 0.503145 | 4.4:+18083735 | None:intergenic |
| TACGCAAGATCAGATATGTC+TGG | 0.503961 | 4.4:-18078322 | MS.gene34981:CDS |
| TCTTTGTCCGCCACATATAC+CGG | 0.505280 | 4.4:-18078204 | MS.gene34981:CDS |
| TAGTAGTGCGGACAGGTGCT+TGG | 0.505666 | 4.4:+18080761 | None:intergenic |
| AAGCAGAACATAAGGAAAAG+AGG | 0.507100 | 4.4:+18080928 | None:intergenic |
| TCTATGTAGATGGCACTGAA+TGG | 0.507383 | 4.4:+18080664 | None:intergenic |
| ATATGTGGCGGACAAAGAGC+AGG | 0.510664 | 4.4:+18078209 | None:intergenic |
| CAGCGAGAAGAGAGATCAGC+AGG | 0.514359 | 4.4:+18083814 | None:intergenic |
| ATCGGACCTGGGATTGTGAA+AGG | 0.516683 | 4.4:+18083710 | None:intergenic |
| TTTCTCATGCTCGGTAGCGT+AGG | 0.518262 | 4.4:-18078244 | MS.gene34981:CDS |
| ATCACGCAAATTGTGCCAAA+AGG | 0.520209 | 4.4:+18080862 | None:intergenic |
| CCACAGAATGAGGGTCCATA+CGG | 0.520478 | 4.4:+18081831 | None:intergenic |
| CCTTCTATATTCAACTTGAA+GGG | 0.527417 | 4.4:-18081088 | MS.gene34981:CDS |
| GTTAGAAACTTATTGCTGAC+AGG | 0.528315 | 4.4:-18080967 | MS.gene34981:CDS |
| TGGTTGACCTGACTGAGGAC+AGG | 0.531034 | 4.4:-18081811 | MS.gene34981:CDS |
| CCTGACTGAGGACAGGGAAG+TGG | 0.535058 | 4.4:-18081804 | MS.gene34981:CDS |
| GTTCCAATAAATCCCCAGAT+TGG | 0.536248 | 4.4:+18081962 | None:intergenic |
| GTAACGATGATCGGAGGCAT+CGG | 0.536695 | 4.4:+18083776 | None:intergenic |
| TCGGTCCCTTTCACAATCCC+AGG | 0.536979 | 4.4:-18083716 | MS.gene34981:intron |
| TCAACTGGCTTATTCATCTA+CGG | 0.537761 | 4.4:-18078364 | MS.gene34981:CDS |
| AGCAGAACATAAGGAAAAGA+GGG | 0.539091 | 4.4:+18080929 | None:intergenic |
| GGAAAAGAGGGCCACAAAAG+AGG | 0.539962 | 4.4:+18080941 | None:intergenic |
| TAACTGAGTGCCGGAACCAA+GGG | 0.542563 | 4.4:+18081351 | None:intergenic |
| ACTTGATGGACCGGTATATG+TGG | 0.546448 | 4.4:+18078194 | None:intergenic |
| ACTACTCACACTTGATGGAC+CGG | 0.548206 | 4.4:+18078185 | None:intergenic |
| GGACAAAGAGCAGGGAGGCA+CGG | 0.550307 | 4.4:+18078218 | None:intergenic |
| GCTGATGATCAAGAGGAGAC+AGG | 0.551210 | 4.4:-18081436 | MS.gene34981:CDS |
| GCGCTTGGTGAGGTGTTGAA+TGG | 0.553794 | 4.4:-18082139 | MS.gene34981:CDS |
| CCTCTTTACGCCAATAAAGT+CGG | 0.554240 | 4.4:-18083735 | MS.gene34981:CDS |
| AAAGAAGCCATAGCAGATGC+AGG | 0.557569 | 4.4:+18078264 | None:intergenic |
| ATGATCAAGAGGAGACAGGA+TGG | 0.557782 | 4.4:-18081432 | MS.gene34981:CDS |
| CTCGGGGATATTTAGTAGTG+CGG | 0.558407 | 4.4:+18080749 | None:intergenic |
| AAAGAAAAGACTGAAGCGCT+TGG | 0.559289 | 4.4:-18082154 | MS.gene34981:CDS |
| CGTCACACAGGAGTTTATGA+TGG | 0.560364 | 4.4:+18081664 | None:intergenic |
| AGCTTTATTTACTGCACTCG+TGG | 0.560606 | 4.4:-18081156 | MS.gene34981:CDS |
| GGATATTTAGTAGTGCGGAC+AGG | 0.564998 | 4.4:+18080754 | None:intergenic |
| GTGCTCCTGTACCAAGGAAG+AGG | 0.566138 | 4.4:+18080718 | None:intergenic |
| TCGCCATTACTTGTGTTAGG+TGG | 0.567016 | 4.4:-18080814 | MS.gene34981:CDS |
| CAGGAGCACCATTCCCCAGA+TGG | 0.572619 | 4.4:-18080704 | MS.gene34981:CDS |
| ATTCCACCTAACACAAGTAA+TGG | 0.572703 | 4.4:+18080811 | None:intergenic |
| CAGAAGATCATGAATGGTGG+TGG | 0.572866 | 4.4:-18080507 | MS.gene34981:CDS |
| AACTGTTGACAAAGAAGGAA+AGG | 0.575555 | 4.4:-18081942 | MS.gene34981:CDS |
| TCGGACCTGGGATTGTGAAA+GGG | 0.576908 | 4.4:+18083711 | None:intergenic |
| AAGATCATGAATGGTGGTGG+AGG | 0.577459 | 4.4:-18080504 | MS.gene34981:intron |
| GCAAATTGTGCCAAAAGGAA+GGG | 0.577825 | 4.4:+18080867 | None:intergenic |
| TACGATGACTTGCCAATCTG+GGG | 0.582508 | 4.4:-18081974 | MS.gene34981:CDS |
| TCCGATCATCGTTACAGCGA+CGG | 0.590246 | 4.4:-18083768 | MS.gene34981:CDS |
| TTCCCCAGATGGCAATGGCA+GGG | 0.592880 | 4.4:-18080693 | MS.gene34981:CDS |
| TCTGCAAGAAGACGCTCACA+AGG | 0.594686 | 4.4:-18082054 | MS.gene34981:CDS |
| AACCCTGCCATTGCCATCTG+GGG | 0.595625 | 4.4:+18080691 | None:intergenic |
| TACCTGTTACACAGAATGGA+AGG | 0.596727 | 4.4:+18083493 | None:intergenic |
| CTCCTGTACCAAGGAAGAGG+TGG | 0.597138 | 4.4:+18080721 | None:intergenic |
| CACCATTCCCCAGATGGCAA+TGG | 0.597636 | 4.4:-18080698 | MS.gene34981:CDS |
| CAGAGTGAATAACTGAGTGC+CGG | 0.598774 | 4.4:+18081342 | None:intergenic |
| CAGTGAATCTCCAAGTGATG+TGG | 0.599430 | 4.4:+18081692 | None:intergenic |
| GTTCATAAGGAGCACTAACA+AGG | 0.599847 | 4.4:+18082110 | None:intergenic |
| ATAACTGAGTGCCGGAACCA+AGG | 0.601440 | 4.4:+18081350 | None:intergenic |
| CACAGAATGAGGGTCCATAC+GGG | 0.605974 | 4.4:+18081832 | None:intergenic |
| GGAAGCTGCTGATGATCAAG+AGG | 0.608953 | 4.4:-18081443 | MS.gene34981:CDS |
| ACAGGATGGAAGTACATTCA+CGG | 0.609901 | 4.4:-18081418 | MS.gene34981:CDS |
| GCCGTCGCTGTAACGATGAT+CGG | 0.610207 | 4.4:+18083767 | None:intergenic |
| GATTGAAATCAGTGCCCGTA+TGG | 0.621489 | 4.4:-18081846 | MS.gene34981:CDS |
| TTGCTGCAGAAGATCATGAA+TGG | 0.621681 | 4.4:-18080513 | MS.gene34981:CDS |
| GTGCAGTAAATAAAGCTCCT+CGG | 0.626601 | 4.4:+18081162 | None:intergenic |
| CATCATAAACTCCTGTGTGA+CGG | 0.630326 | 4.4:-18081663 | MS.gene34981:CDS |
| TTACACAGAATGGAAGGTCA+AGG | 0.631427 | 4.4:+18083499 | None:intergenic |
| GATAGTCCTAATATGGACGC+TGG | 0.635172 | 4.4:-18080842 | MS.gene34981:CDS |
| TTTATTGGCGTAAAGAGGAA+CGG | 0.635235 | 4.4:+18083740 | None:intergenic |
| CGAGAAGAGAGATCAGCAGG+TGG | 0.635836 | 4.4:+18083817 | None:intergenic |
| GTATTCTATCCCTACAACCG+AGG | 0.642112 | 4.4:-18081179 | MS.gene34981:CDS |
| CAAAAGAAGAACCGTCACAC+AGG | 0.644678 | 4.4:+18081652 | None:intergenic |
| TCAGGTCAACCACAGAATGA+GGG | 0.644900 | 4.4:+18081822 | None:intergenic |
| GGTTGACCTGACTGAGGACA+GGG | 0.648121 | 4.4:-18081810 | MS.gene34981:CDS |
| TATGTACACAGTGAAATGGA+AGG | 0.649524 | 4.4:-18081771 | MS.gene34981:CDS |
| CCGTATGGACCCTCATTCTG+TGG | 0.650303 | 4.4:-18081831 | MS.gene34981:CDS |
| AAAGACTGAAGCGCTTGGTG+AGG | 0.652344 | 4.4:-18082149 | MS.gene34981:CDS |
| AAGTTGAATATAGAAGGAAG+TGG | 0.654133 | 4.4:+18081094 | None:intergenic |
| CACCAGATATGCTCAAGACG+AGG | 0.655302 | 4.4:-18081464 | MS.gene34981:intron |
| TGATGGACCGGTATATGTGG+CGG | 0.659080 | 4.4:+18078197 | None:intergenic |
| GTCGCTGTAACGATGATCGG+AGG | 0.669845 | 4.4:+18083770 | None:intergenic |
| GGAATGGTGCTCCTGTACCA+AGG | 0.679836 | 4.4:+18080712 | None:intergenic |
| GGCATCGGATCTGACGCGAG+TGG | 0.682818 | 4.4:+18083791 | None:intergenic |
| TATGTGGCGGACAAAGAGCA+GGG | 0.684805 | 4.4:+18078210 | None:intergenic |
| GGAAGAGGTGGAATTTCTCG+GGG | 0.685340 | 4.4:+18080733 | None:intergenic |
| CGTCACTGCTTTCATCACTG+TGG | 0.690084 | 4.4:-18080554 | MS.gene34981:CDS |
| TTCTGTGGTTGACCTGACTG+AGG | 0.695894 | 4.4:-18081816 | MS.gene34981:CDS |
| CTGCAAGAAGACGCTCACAA+GGG | 0.699485 | 4.4:-18082053 | MS.gene34981:CDS |
| CTGCAGAAGATCATGAATGG+TGG | 0.720682 | 4.4:-18080510 | MS.gene34981:CDS |
| GCAAGTTAATCAGTTCCGAG+AGG | 0.727165 | 4.4:-18082029 | MS.gene34981:CDS |
| TGTAGATAGTGTAAATCCTG+TGG | 0.748430 | 4.4:+18080611 | None:intergenic |
| GTGGCGGACAAAGAGCAGGG+AGG | 0.771980 | 4.4:+18078213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATAATAGTAATAATT+TGG | + | chr4.4:18078621-18078640 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTTTTTTTTTGA+TGG | - | chr4.4:18078972-18078991 | MS.gene34981:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081873-18081892 | MS.gene34981:CDS | 100.0% |
| !! | AACTGATGTATAAAATATAT+GGG | + | chr4.4:18083018-18083037 | None:intergenic | 15.0% |
| !! | ACAAAAGTAAAAAAAAAAAC+TGG | - | chr4.4:18082398-18082417 | MS.gene34981:intron | 15.0% |
| !! | ATAATACTAGATCATTAATA+TGG | + | chr4.4:18078446-18078465 | None:intergenic | 15.0% |
| !! | ATTAAACTAAATGAGAAAAA+TGG | + | chr4.4:18079387-18079406 | None:intergenic | 15.0% |
| !! | TACAAACTCAAAAATAAATA+TGG | + | chr4.4:18081739-18081758 | None:intergenic | 15.0% |
| !! | TAGTTTATTTAAATCTTGTT+TGG | - | chr4.4:18078680-18078699 | MS.gene34981:intron | 15.0% |
| !!! | TAATTTTTAGCTTAGTATAA+GGG | - | chr4.4:18083161-18083180 | MS.gene34981:intron | 15.0% |
| !!! | TATTTATTTTTGAGTTTGTA+TGG | - | chr4.4:18081739-18081758 | MS.gene34981:CDS | 15.0% |
| !!! | TTTTTAAACTTAAGTTCATA+AGG | + | chr4.4:18079932-18079951 | None:intergenic | 15.0% |
| !! | AAAGTAGACTAAAAATTTAC+GGG | + | chr4.4:18079354-18079373 | None:intergenic | 20.0% |
| !! | AATAATTAGAGAAAGTAAGA+TGG | - | chr4.4:18082799-18082818 | MS.gene34981:intron | 20.0% |
| !! | ATAAGCTCAAACTTAAATTT+GGG | + | chr4.4:18083351-18083370 | None:intergenic | 20.0% |
| !! | ATATGTAAATTATAGTCCAA+TGG | - | chr4.4:18079476-18079495 | MS.gene34981:intron | 20.0% |
| !! | ATTAAAACTGTTAACAGATT+TGG | - | chr4.4:18082878-18082897 | MS.gene34981:intron | 20.0% |
| !! | ATTCAGAATGAAAATTTGAA+AGG | + | chr4.4:18082661-18082680 | None:intergenic | 20.0% |
| !! | CAAAGTAGACTAAAAATTTA+CGG | + | chr4.4:18079355-18079374 | None:intergenic | 20.0% |
| !! | CAACTGATGTATAAAATATA+TGG | + | chr4.4:18083019-18083038 | None:intergenic | 20.0% |
| !! | GAAGTAAGCAATAATAAAAT+TGG | + | chr4.4:18083479-18083498 | None:intergenic | 20.0% |
| !! | TACTAAGCTAAAAATTAGTT+AGG | + | chr4.4:18083158-18083177 | None:intergenic | 20.0% |
| !! | TAGTTTAATTAACTCTTGTT+TGG | - | chr4.4:18079398-18079417 | MS.gene34981:intron | 20.0% |
| !! | TCAAAAATAAATATGGTGAA+AGG | + | chr4.4:18081732-18081751 | None:intergenic | 20.0% |
| !! | TGTATCAATGTTTAAAAATC+TGG | + | chr4.4:18082514-18082533 | None:intergenic | 20.0% |
| !!! | ATTGTTATTTGTTTCAGTTT+TGG | - | chr4.4:18079436-18079455 | MS.gene34981:intron | 20.0% |
| !!! | CTAATTTTTAGCTTAGTATA+AGG | - | chr4.4:18083160-18083179 | MS.gene34981:intron | 20.0% |
| !!! | TATTTCTATGATCTTATTCT+AGG | + | chr4.4:18082027-18082046 | None:intergenic | 20.0% |
| !!! | TTGTTGAAGCTTTTTTTTAA+AGG | - | chr4.4:18080739-18080758 | MS.gene34981:CDS | 20.0% |
| ! | AAAAAAAGCTTCAACAATGA+AGG | + | chr4.4:18080736-18080755 | None:intergenic | 25.0% |
| ! | AAAAAAGCTTCAACAATGAA+GGG | + | chr4.4:18080735-18080754 | None:intergenic | 25.0% |
| ! | AAAATAAATATGGTGAAAGG+TGG | + | chr4.4:18081729-18081748 | None:intergenic | 25.0% |
| ! | AACAACACAAAAGAAAAACA+TGG | - | chr4.4:18083271-18083290 | MS.gene34981:intron | 25.0% |
| ! | AATAGACCAATGTTCTATAT+AGG | + | chr4.4:18080498-18080517 | None:intergenic | 25.0% |
| ! | AATCCAAAATTCGATTATAC+TGG | + | chr4.4:18081619-18081638 | None:intergenic | 25.0% |
| ! | AATGTTCTATATAGGTGAAT+AGG | + | chr4.4:18080490-18080509 | None:intergenic | 25.0% |
| ! | ACAACACAAAAGAAAAACAT+GGG | - | chr4.4:18083272-18083291 | MS.gene34981:intron | 25.0% |
| ! | ACCATGTGATAACTAATTAA+CGG | + | chr4.4:18081816-18081835 | None:intergenic | 25.0% |
| ! | AGAAAATATTTATACTCGCT+CGG | + | chr4.4:18080115-18080134 | None:intergenic | 25.0% |
| ! | AGCTAAAAATTAGTTAGGTT+TGG | + | chr4.4:18083153-18083172 | None:intergenic | 25.0% |
| ! | AGGAAGAAAAAAAAAACTGT+TGG | + | chr4.4:18083438-18083457 | None:intergenic | 25.0% |
| ! | AGTAAAGTGAATTTGGATAA+GGG | - | chr4.4:18083232-18083251 | MS.gene34981:intron | 25.0% |
| ! | ATTACTGTTTGATTGTGAAA+TGG | - | chr4.4:18080989-18081008 | MS.gene34981:intron | 25.0% |
| ! | ATTTAATCTACCCTTCTTAT+GGG | + | chr4.4:18082845-18082864 | None:intergenic | 25.0% |
| ! | CAATTTGGTTAATTGGATTA+CGG | - | chr4.4:18082435-18082454 | MS.gene34981:intron | 25.0% |
| ! | CATAAGCTCAAACTTAAATT+TGG | + | chr4.4:18083352-18083371 | None:intergenic | 25.0% |
| ! | GAATTTAGAAATGCTATGAT+TGG | + | chr4.4:18083416-18083435 | None:intergenic | 25.0% |
| ! | TAAAAAAGAGAAAGACTCTA+CGG | - | chr4.4:18079946-18079965 | MS.gene34981:intron | 25.0% |
| ! | TAAATGACCCATATTTAGTA+AGG | - | chr4.4:18082904-18082923 | MS.gene34981:intron | 25.0% |
| ! | TATTATCTAATCATCATGTG+TGG | - | chr4.4:18078633-18078652 | MS.gene34981:intron | 25.0% |
| ! | TATTCACCTATATAGAACAT+TGG | - | chr4.4:18080489-18080508 | MS.gene34981:intron | 25.0% |
| ! | TGAAAATTTGAAAGGAAGAA+AGG | + | chr4.4:18082653-18082672 | None:intergenic | 25.0% |
| ! | TGTGAATATGAATATAGTAC+AGG | + | chr4.4:18081978-18081997 | None:intergenic | 25.0% |
| !! | AAAAAAACTGGTTCAATTAG+CGG | - | chr4.4:18082410-18082429 | MS.gene34981:intron | 25.0% |
| !! | ATGCAATGATTTGTATAGAT+TGG | + | chr4.4:18079238-18079257 | None:intergenic | 25.0% |
| !! | CTCTTTTGAATGATATTCTT+TGG | - | chr4.4:18083095-18083114 | MS.gene34981:intron | 25.0% |
| !! | TTTCCAGTATAATCGAATTT+TGG | - | chr4.4:18081613-18081632 | MS.gene34981:CDS | 25.0% |
| !!! | AATTTTTAGTCTACTTTGTG+TGG | - | chr4.4:18079357-18079376 | MS.gene34981:intron | 25.0% |
| !!! | ACAGTTTTAATTAGATTCTC+CGG | + | chr4.4:18082869-18082888 | None:intergenic | 25.0% |
| !!! | TCTATTTTGTTTGAAAGTAG+AGG | - | chr4.4:18083522-18083541 | MS.gene34981:intron | 25.0% |
| AAATTAGTTAGGTTTGGACT+TGG | + | chr4.4:18083147-18083166 | None:intergenic | 30.0% | |
| AACACAAAAGAAAAACATGG+GGG | - | chr4.4:18083274-18083293 | MS.gene34981:intron | 30.0% | |
| AAGTTGAATATAGAAGGAAG+TGG | + | chr4.4:18080935-18080954 | None:intergenic | 30.0% | |
| AATTGGATTACGGTTCAAAT+GGG | - | chr4.4:18082445-18082464 | MS.gene34981:intron | 30.0% | |
| AATTTACCTGTTACACAGAA+TGG | + | chr4.4:18078540-18078559 | None:intergenic | 30.0% | |
| ACACAAACAATATCAATCTC+AGG | + | chr4.4:18083615-18083634 | None:intergenic | 30.0% | |
| AGCAAGATGTTTAACTAGAA+AGG | + | chr4.4:18079506-18079525 | None:intergenic | 30.0% | |
| AGTTTATGTACACAGTGAAA+TGG | - | chr4.4:18080251-18080270 | MS.gene34981:intron | 30.0% | |
| ATAAGAATGTTGTGATGTGT+GGG | - | chr4.4:18082744-18082763 | MS.gene34981:intron | 30.0% | |
| ATATACATCACCAAAACTAC+AGG | + | chr4.4:18082309-18082328 | None:intergenic | 30.0% | |
| ATCCTGAACCTTACTAAATA+TGG | + | chr4.4:18082915-18082934 | None:intergenic | 30.0% | |
| ATGCTAACCAAAATCATAAG+AGG | + | chr4.4:18079101-18079120 | None:intergenic | 30.0% | |
| ATTCTTCTGACTGTTGTAAT+GGG | - | chr4.4:18079151-18079170 | MS.gene34981:intron | 30.0% | |
| CAAATTCACTTTACTGTCAT+TGG | + | chr4.4:18083227-18083246 | None:intergenic | 30.0% | |
| CAACACAAAAGAAAAACATG+GGG | - | chr4.4:18083273-18083292 | MS.gene34981:intron | 30.0% | |
| CAATCACATAAGACAAGATT+AGG | - | chr4.4:18082771-18082790 | MS.gene34981:intron | 30.0% | |
| CAATGACAGTAAAGTGAATT+TGG | - | chr4.4:18083225-18083244 | MS.gene34981:intron | 30.0% | |
| CAATGTTTAAAAATCTGGAC+CGG | + | chr4.4:18082509-18082528 | None:intergenic | 30.0% | |
| CAGTAAAGTGAATTTGGATA+AGG | - | chr4.4:18083231-18083250 | MS.gene34981:intron | 30.0% | |
| CATTTAATCTACCCTTCTTA+TGG | + | chr4.4:18082846-18082865 | None:intergenic | 30.0% | |
| CCTTCTATATTCAACTTGAA+GGG | - | chr4.4:18080938-18080957 | MS.gene34981:CDS | 30.0% | |
| CTAGCTGAATTTGAACAAAT+TGG | - | chr4.4:18078844-18078863 | MS.gene34981:intron | 30.0% | |
| GAAAATATTTATACTCGCTC+GGG | + | chr4.4:18080114-18080133 | None:intergenic | 30.0% | |
| GAGAGAAATTGAAAAGAGAT+CGG | + | chr4.4:18078337-18078356 | None:intergenic | 30.0% | |
| GAGGTATGTAACTTATCTTA+TGG | - | chr4.4:18081541-18081560 | MS.gene34981:intron | 30.0% | |
| GATATTGTTTGTGTTTCCAT+AGG | - | chr4.4:18083621-18083640 | MS.gene34981:intron | 30.0% | |
| GCAGATAAAAATGAAAAACG+AGG | + | chr4.4:18080533-18080552 | None:intergenic | 30.0% | |
| TAACTAGAAAGGAAAACCAT+TGG | + | chr4.4:18079495-18079514 | None:intergenic | 30.0% | |
| TAATTGGATTACGGTTCAAA+TGG | - | chr4.4:18082444-18082463 | MS.gene34981:intron | 30.0% | |
| TATAAGAATGTTGTGATGTG+TGG | - | chr4.4:18082743-18082762 | MS.gene34981:intron | 30.0% | |
| TATTTAGTAAGGTTCAGGAT+AGG | - | chr4.4:18082915-18082934 | MS.gene34981:intron | 30.0% | |
| TCAAACAAATCTCCAAAATC+TGG | + | chr4.4:18082542-18082561 | None:intergenic | 30.0% | |
| TCCTGAACCTTACTAAATAT+GGG | + | chr4.4:18082914-18082933 | None:intergenic | 30.0% | |
| TCCTTCTATATTCAACTTGA+AGG | - | chr4.4:18080937-18080956 | MS.gene34981:CDS | 30.0% | |
| TTACTGTCATTGGAAATTTC+TGG | + | chr4.4:18083217-18083236 | None:intergenic | 30.0% | |
| TTCTTCTCATGTCGTTAATT+GGG | - | chr4.4:18082115-18082134 | MS.gene34981:CDS | 30.0% | |
| TTTACAATCACCCATAAGAA+GGG | - | chr4.4:18082832-18082851 | MS.gene34981:intron | 30.0% | |
| TTTCTTCTCATGTCGTTAAT+TGG | - | chr4.4:18082114-18082133 | MS.gene34981:CDS | 30.0% | |
| ! | AAATACTGACTATAGCATAG+TGG | - | chr4.4:18078906-18078925 | MS.gene34981:intron | 30.0% |
| ! | CAATTTGTTCAAATTCAGCT+AGG | + | chr4.4:18078846-18078865 | None:intergenic | 30.0% |
| ! | TGATACATCTAACCAGATTT+TGG | - | chr4.4:18082527-18082546 | MS.gene34981:intron | 30.0% |
| ! | TTTAGCTTAGTATAAGGGTA+GGG | - | chr4.4:18083166-18083185 | MS.gene34981:intron | 30.0% |
| ! | TTTCCACCGTTTTCAATTTT+GGG | - | chr4.4:18078367-18078386 | MS.gene34981:CDS | 30.0% |
| ! | TTTTCCACCGTTTTCAATTT+TGG | - | chr4.4:18078366-18078385 | MS.gene34981:CDS | 30.0% |
| ! | TTTTCCATTCTCTTCTCAAA+AGG | + | chr4.4:18080292-18080311 | None:intergenic | 30.0% |
| !! | ATATTCTTTGGTTCTGTATG+TGG | - | chr4.4:18083107-18083126 | MS.gene34981:intron | 30.0% |
| !! | ATTGTCACTTGTTTCAGTTT+TGG | - | chr4.4:18078717-18078736 | MS.gene34981:intron | 30.0% |
| !! | CGTTTATTTTCTTGTTTGAC+AGG | - | chr4.4:18081037-18081056 | MS.gene34981:intron | 30.0% |
| !! | TATTCCTTTTGAGAAGAGAA+TGG | - | chr4.4:18080285-18080304 | MS.gene34981:intron | 30.0% |
| !! | TATTCTTTGGTTCTGTATGT+GGG | - | chr4.4:18083108-18083127 | MS.gene34981:intron | 30.0% |
| !! | TTCATTTTTCTATTGAAGCG+AGG | + | chr4.4:18079214-18079233 | None:intergenic | 30.0% |
| !!! | CTTAAGGATCAGTTTTAAAG+AGG | - | chr4.4:18082691-18082710 | MS.gene34981:intron | 30.0% |
| !!! | TTTTAGCTTAGTATAAGGGT+AGG | - | chr4.4:18083165-18083184 | MS.gene34981:intron | 30.0% |
| AAACTCAATCCAATCACACA+AGG | + | chr4.4:18078957-18078976 | None:intergenic | 35.0% | |
| AACTGTTGACAAAGAAGGAA+AGG | - | chr4.4:18080084-18080103 | MS.gene34981:intron | 35.0% | |
| AAGAAGGGTAGATTAAATGC+CGG | - | chr4.4:18082847-18082866 | MS.gene34981:intron | 35.0% | |
| AAGCAGAACATAAGGAAAAG+AGG | + | chr4.4:18081101-18081120 | None:intergenic | 35.0% | |
| AAGGATAACTTCACTATTGC+TGG | + | chr4.4:18082622-18082641 | None:intergenic | 35.0% | |
| AATTGTCTTCGACTCTATGT+AGG | - | chr4.4:18081852-18081871 | MS.gene34981:CDS | 35.0% | |
| ACACAAAAGAAAAACATGGG+GGG | - | chr4.4:18083275-18083294 | MS.gene34981:intron | 35.0% | |
| ACATGAATCTAATGCGAATC+TGG | - | chr4.4:18079269-18079288 | MS.gene34981:intron | 35.0% | |
| ACCCATATTTAGTAAGGTTC+AGG | - | chr4.4:18082910-18082929 | MS.gene34981:intron | 35.0% | |
| ACTATCTGCAATTGACAACA+CGG | - | chr4.4:18079679-18079698 | MS.gene34981:intron | 35.0% | |
| AGCAAGATGTTTATCCGAAA+AGG | + | chr4.4:18078782-18078801 | None:intergenic | 35.0% | |
| AGCAGAACATAAGGAAAAGA+GGG | + | chr4.4:18081100-18081119 | None:intergenic | 35.0% | |
| AGCGGTTCAATTTGGTTAAT+TGG | - | chr4.4:18082428-18082447 | MS.gene34981:intron | 35.0% | |
| AGGAAGAAAGGAGAGAAAAA+AGG | + | chr4.4:18082641-18082660 | None:intergenic | 35.0% | |
| AGGATAACTTCACTATTGCT+GGG | + | chr4.4:18082621-18082640 | None:intergenic | 35.0% | |
| ATACATGAGCTCATATCAAC+AGG | + | chr4.4:18083375-18083394 | None:intergenic | 35.0% | |
| ATCGTACATGTCACACTTTA+TGG | + | chr4.4:18082256-18082275 | None:intergenic | 35.0% | |
| ATGCAAACTTCGTTCTTCTT+TGG | - | chr4.4:18083731-18083750 | MS.gene34981:CDS | 35.0% | |
| ATTCCACCTAACACAAGTAA+TGG | + | chr4.4:18081218-18081237 | None:intergenic | 35.0% | |
| ATTCTTATATCTGCCACACA+AGG | + | chr4.4:18082732-18082751 | None:intergenic | 35.0% | |
| ATTGGAACTGTTGACAAAGA+AGG | - | chr4.4:18080079-18080098 | MS.gene34981:intron | 35.0% | |
| ATTGTCTTCGACTCTATGTA+GGG | - | chr4.4:18081853-18081872 | MS.gene34981:CDS | 35.0% | |
| CATTCTTCTGACTGTTGTAA+TGG | - | chr4.4:18079150-18079169 | MS.gene34981:intron | 35.0% | |
| CCAAATAGAGCATGTATTCA+AGG | - | chr4.4:18082219-18082238 | MS.gene34981:intron | 35.0% | |
| CCTTGAATACATGCTCTATT+TGG | + | chr4.4:18082222-18082241 | None:intergenic | 35.0% | |
| CGATGACCCAAAATTGAAAA+CGG | + | chr4.4:18078376-18078395 | None:intergenic | 35.0% | |
| CTGAATGAATAAGCGACTTA+AGG | - | chr4.4:18082675-18082694 | MS.gene34981:intron | 35.0% | |
| CTTCTTATGGGTGATTGTAA+AGG | + | chr4.4:18082833-18082852 | None:intergenic | 35.0% | |
| CTTTACAATCACCCATAAGA+AGG | - | chr4.4:18082831-18082850 | MS.gene34981:intron | 35.0% | |
| GATGTTTATCCGAAAAGGTA+AGG | + | chr4.4:18078777-18078796 | None:intergenic | 35.0% | |
| GCAAATATGGACTTGAACTT+AGG | + | chr4.4:18080650-18080669 | None:intergenic | 35.0% | |
| GCAAGTCATCGTAATACATT+TGG | + | chr4.4:18080045-18080064 | None:intergenic | 35.0% | |
| GCCGTTAATTAGTTATCACA+TGG | - | chr4.4:18081812-18081831 | MS.gene34981:CDS | 35.0% | |
| GTTAGAAACTTATTGCTGAC+AGG | - | chr4.4:18081059-18081078 | MS.gene34981:intron | 35.0% | |
| GTTATAACACTGTAGAGTAG+CGG | - | chr4.4:18079633-18079652 | MS.gene34981:intron | 35.0% | |
| GTTCAATTAGCGGTTCAATT+TGG | - | chr4.4:18082420-18082439 | MS.gene34981:intron | 35.0% | |
| TAACCTTGTCTAGTGAGAAT+TGG | - | chr4.4:18082967-18082986 | MS.gene34981:intron | 35.0% | |
| TAACTTATGACACATGCAAG+TGG | - | chr4.4:18079186-18079205 | MS.gene34981:intron | 35.0% | |
| TACATCAGTTGTGTGTAAAG+TGG | - | chr4.4:18083028-18083047 | MS.gene34981:intron | 35.0% | |
| TAGTTATCACATGGTCTGTT+AGG | - | chr4.4:18081821-18081840 | MS.gene34981:CDS | 35.0% | |
| TATGTACACAGTGAAATGGA+AGG | - | chr4.4:18080255-18080274 | MS.gene34981:intron | 35.0% | |
| TCAACTTGAAGGGACTAATT+GGG | - | chr4.4:18080948-18080967 | MS.gene34981:CDS | 35.0% | |
| TGAATACATGCTCTATTTGG+TGG | + | chr4.4:18082219-18082238 | None:intergenic | 35.0% | |
| TGGATAAGGGAATTACTCAA+GGG | - | chr4.4:18083245-18083264 | MS.gene34981:intron | 35.0% | |
| TGTAGATAGTGTAAATCCTG+TGG | + | chr4.4:18081418-18081437 | None:intergenic | 35.0% | |
| TGTGATAACTAATTAACGGC+CGG | + | chr4.4:18081812-18081831 | None:intergenic | 35.0% | |
| TGTTAAGGAAGCAGAACATA+AGG | + | chr4.4:18081109-18081128 | None:intergenic | 35.0% | |
| TTACTACATATCATCTGTGC+CGG | - | chr4.4:18081790-18081809 | MS.gene34981:CDS | 35.0% | |
| TTCAACTTGAAGGGACTAAT+TGG | - | chr4.4:18080947-18080966 | MS.gene34981:CDS | 35.0% | |
| TTGGATAAGGGAATTACTCA+AGG | - | chr4.4:18083244-18083263 | MS.gene34981:intron | 35.0% | |
| TTTATACCAGAAACCTCTAG+TGG | - | chr4.4:18079056-18079075 | MS.gene34981:intron | 35.0% | |
| TTTATTGGCGTAAAGAGGAA+CGG | + | chr4.4:18078289-18078308 | None:intergenic | 35.0% | |
| TTTGCGTGATAGTCCTAATA+TGG | - | chr4.4:18081177-18081196 | MS.gene34981:CDS | 35.0% | |
| ! | AAATTTCTGGATTTGCCCAT+GGG | + | chr4.4:18083204-18083223 | None:intergenic | 35.0% |
| ! | ACTACATTTTTGCTAGTGTC+TGG | - | chr4.4:18081390-18081409 | MS.gene34981:CDS | 35.0% |
| ! | AGATCAATGCCTTACCTTTT+CGG | - | chr4.4:18078765-18078784 | MS.gene34981:intron | 35.0% |
| ! | CTACATTTTTGCTAGTGTCT+GGG | - | chr4.4:18081391-18081410 | MS.gene34981:CDS | 35.0% |
| ! | CTCTTGTTTGGTTGATTACT+TGG | - | chr4.4:18079410-18079429 | MS.gene34981:intron | 35.0% |
| ! | TACATTTTTGCTAGTGTCTG+GGG | - | chr4.4:18081392-18081411 | MS.gene34981:CDS | 35.0% |
| ! | TACCTCAATTGTGTTGACAT+GGG | - | chr4.4:18083576-18083595 | MS.gene34981:intron | 35.0% |
| ! | TACTTCAATGCCTGTAGTTT+TGG | - | chr4.4:18082296-18082315 | MS.gene34981:intron | 35.0% |
| ! | TATTTTCTGCCTTGTGTGAT+TGG | - | chr4.4:18078945-18078964 | MS.gene34981:intron | 35.0% |
| ! | TCAACTGGCTTATTCATCTA+CGG | - | chr4.4:18083662-18083681 | MS.gene34981:intron | 35.0% |
| ! | TTACCTCAATTGTGTTGACA+TGG | - | chr4.4:18083575-18083594 | MS.gene34981:intron | 35.0% |
| ! | TTCCATAGGTCTTTTCTTTG+TGG | - | chr4.4:18083635-18083654 | MS.gene34981:intron | 35.0% |
| ! | TTGCAGTCCTCTTATGATTT+TGG | - | chr4.4:18079091-18079110 | MS.gene34981:intron | 35.0% |
| !! | ACTTGTTTCAGTTTTGGCAA+TGG | - | chr4.4:18078723-18078742 | MS.gene34981:intron | 35.0% |
| !! | ATTTTTATGCTTGCACTGGT+TGG | - | chr4.4:18080823-18080842 | MS.gene34981:CDS | 35.0% |
| !! | CCCTTCAAGTTGAATATAGA+AGG | + | chr4.4:18080941-18080960 | None:intergenic | 35.0% |
| !! | CTTCATTTTTATGCTTGCAC+TGG | - | chr4.4:18080819-18080838 | MS.gene34981:CDS | 35.0% |
| !! | TCATTAATATGGCGTTGACA+TGG | + | chr4.4:18078435-18078454 | None:intergenic | 35.0% |
| AAAGCCTTGAGTGTAGGTTA+GGG | - | chr4.4:18082561-18082580 | MS.gene34981:intron | 40.0% | |
| AAATAAAGCTCCTCGGTTGT+AGG | + | chr4.4:18080860-18080879 | None:intergenic | 40.0% | |
| AAGCGATTGCAACTGTGTTA+AGG | + | chr4.4:18081124-18081143 | None:intergenic | 40.0% | |
| AAGGAAGAGGTGGAATTTCT+CGG | + | chr4.4:18081298-18081317 | None:intergenic | 40.0% | |
| AAGTTACCAGCGTCCATATT+AGG | + | chr4.4:18081193-18081212 | None:intergenic | 40.0% | |
| AATAAAGCTCCTCGGTTGTA+GGG | + | chr4.4:18080859-18080878 | None:intergenic | 40.0% | |
| AATCAAACCAGCTAGACCTT+CGG | - | chr4.4:18082343-18082362 | MS.gene34981:intron | 40.0% | |
| AATTGAAAAGAGATCGGACC+TGG | + | chr4.4:18078331-18078350 | None:intergenic | 40.0% | |
| ACTATTGCTGGGTCACAAAT+TGG | + | chr4.4:18082610-18082629 | None:intergenic | 40.0% | |
| ACTTCGCCATTACTTGTGTT+AGG | - | chr4.4:18081209-18081228 | MS.gene34981:CDS | 40.0% | |
| ATAACATACAACGCCACTAG+AGG | + | chr4.4:18079072-18079091 | None:intergenic | 40.0% | |
| ATCACGCAAATTGTGCCAAA+AGG | + | chr4.4:18081167-18081186 | None:intergenic | 40.0% | |
| ATGTATGCATGAGCTTCATG+AGG | + | chr4.4:18078661-18078680 | None:intergenic | 40.0% | |
| ATTGAAAAGAGATCGGACCT+GGG | + | chr4.4:18078330-18078349 | None:intergenic | 40.0% | |
| CACCACAAAGAAAAGACCTA+TGG | + | chr4.4:18083640-18083659 | None:intergenic | 40.0% | |
| CATCATAAACTCCTGTGTGA+CGG | - | chr4.4:18080363-18080382 | MS.gene34981:intron | 40.0% | |
| CATGAGAAGAAAGAGATGAG+TGG | + | chr4.4:18082106-18082125 | None:intergenic | 40.0% | |
| CCTCTTTACGCCAATAAAGT+CGG | - | chr4.4:18078291-18078310 | MS.gene34981:CDS | 40.0% | |
| GCAAATTGTGCCAAAAGGAA+GGG | + | chr4.4:18081162-18081181 | None:intergenic | 40.0% | |
| GGACAAACATTTCACATCTC+AGG | + | chr4.4:18083458-18083477 | None:intergenic | 40.0% | |
| GGATAAGGGAATTACTCAAG+GGG | - | chr4.4:18083246-18083265 | MS.gene34981:intron | 40.0% | |
| GGGTGATTGTAAAGGTCATT+TGG | + | chr4.4:18082825-18082844 | None:intergenic | 40.0% | |
| GGTTAGGGAGTTTATGTGAT+TGG | - | chr4.4:18082576-18082595 | MS.gene34981:intron | 40.0% | |
| GTAGTACAGCTCTATGTAGA+TGG | + | chr4.4:18081375-18081394 | None:intergenic | 40.0% | |
| GTCATAAGTTACAGACAACC+AGG | + | chr4.4:18079177-18079196 | None:intergenic | 40.0% | |
| GTCATATATGCTCTCACATC+TGG | - | chr4.4:18080892-18080911 | MS.gene34981:CDS | 40.0% | |
| GTGCAGTAAATAAAGCTCCT+CGG | + | chr4.4:18080867-18080886 | None:intergenic | 40.0% | |
| GTTCCAATAAATCCCCAGAT+TGG | + | chr4.4:18080067-18080086 | None:intergenic | 40.0% | |
| TACCTGTTACACAGAATGGA+AGG | + | chr4.4:18078536-18078555 | None:intergenic | 40.0% | |
| TACGCAAGATCAGATATGTC+TGG | - | chr4.4:18083704-18083723 | MS.gene34981:intron | 40.0% | |
| TATGGCTTCTTTCTCATGCT+CGG | - | chr4.4:18083773-18083792 | MS.gene34981:CDS | 40.0% | |
| TGACCCAAAATTGAAAACGG+TGG | + | chr4.4:18078373-18078392 | None:intergenic | 40.0% | |
| TGGACTTGAACTTAGGAAAC+CGG | + | chr4.4:18080643-18080662 | None:intergenic | 40.0% | |
| TGTTTGAAAGCCTTGAGTGT+AGG | - | chr4.4:18082555-18082574 | MS.gene34981:intron | 40.0% | |
| TTACACAGAATGGAAGGTCA+AGG | + | chr4.4:18078530-18078549 | None:intergenic | 40.0% | |
| TTCGTTCTTCTTTGGCTACA+TGG | - | chr4.4:18083739-18083758 | MS.gene34981:CDS | 40.0% | |
| TTCTTCTCTTCCACATCACT+TGG | - | chr4.4:18080324-18080343 | MS.gene34981:intron | 40.0% | |
| TTGCCAATCTGGGGATTTAT+TGG | - | chr4.4:18080061-18080080 | MS.gene34981:intron | 40.0% | |
| TTGCTGCAGAAGATCATGAA+TGG | - | chr4.4:18081513-18081532 | MS.gene34981:intron | 40.0% | |
| TTGTCACATAACTGCTACAG+AGG | - | chr4.4:18079609-18079628 | MS.gene34981:intron | 40.0% | |
| TTGTCTTCGACTCTATGTAG+GGG | - | chr4.4:18081854-18081873 | MS.gene34981:CDS | 40.0% | |
| ! | AAAGAAAAGACTGAAGCGCT+TGG | - | chr4.4:18079872-18079891 | MS.gene34981:intron | 40.0% |
| ! | ACACAAAAGTAAGCCTTGTG+TGG | - | chr4.4:18082716-18082735 | MS.gene34981:intron | 40.0% |
| ! | ACAGGATGGAAGTACATTCA+CGG | - | chr4.4:18080608-18080627 | MS.gene34981:CDS | 40.0% |
| ! | ACGGGCTAAACAAAGTTCAA+AGG | + | chr4.4:18079336-18079355 | None:intergenic | 40.0% |
| ! | ATTACGATGACTTGCCAATC+TGG | - | chr4.4:18080050-18080069 | MS.gene34981:intron | 40.0% |
| ! | CATAGGTCTTTTCTTTGTGG+TGG | - | chr4.4:18083638-18083657 | MS.gene34981:intron | 40.0% |
| ! | CATTCGGACACACTCATTTT+AGG | + | chr4.4:18079840-18079859 | None:intergenic | 40.0% |
| ! | CTATGTAGATGGCACTGAAT+GGG | + | chr4.4:18081364-18081383 | None:intergenic | 40.0% |
| ! | GAAATTTCTGGATTTGCCCA+TGG | + | chr4.4:18083205-18083224 | None:intergenic | 40.0% |
| ! | GTCTTTTCTTTCTCATGACC+TGG | + | chr4.4:18079863-18079882 | None:intergenic | 40.0% |
| ! | TCTATGTAGATGGCACTGAA+TGG | + | chr4.4:18081365-18081384 | None:intergenic | 40.0% |
| ! | TTACGATGACTTGCCAATCT+GGG | - | chr4.4:18080051-18080070 | MS.gene34981:intron | 40.0% |
| !! | AGCTTTATTTACTGCACTCG+TGG | - | chr4.4:18080870-18080889 | MS.gene34981:CDS | 40.0% |
| !! | AGTCCTTTTTAACTGCCTCT+CGG | + | chr4.4:18080015-18080034 | None:intergenic | 40.0% |
| !! | GTTCATAAGGAGCACTAACA+AGG | + | chr4.4:18079919-18079938 | None:intergenic | 40.0% |
| !! | TAATATGGCGTTGACATGGA+AGG | + | chr4.4:18078431-18078450 | None:intergenic | 40.0% |
| !! | TTTCTTTGTGGTGGATCAAC+TGG | - | chr4.4:18083647-18083666 | MS.gene34981:intron | 40.0% |
| !!! | TCTTCTTTTGACTGGTTTCC+TGG | - | chr4.4:18080387-18080406 | MS.gene34981:intron | 40.0% |
| AAAATCTGGACCGGTTGAAC+CGG | + | chr4.4:18082500-18082519 | None:intergenic | 45.0% | |
| AAAGAAGCCATAGCAGATGC+AGG | + | chr4.4:18083765-18083784 | None:intergenic | 45.0% | |
| AACTCCCTAACCTACACTCA+AGG | + | chr4.4:18082568-18082587 | None:intergenic | 45.0% | |
| ACACATGCTCCTTGATGTTG+AGG | + | chr4.4:18082144-18082163 | None:intergenic | 45.0% | |
| AGGAAGAGGTGGAATTTCTC+GGG | + | chr4.4:18081297-18081316 | None:intergenic | 45.0% | |
| ATCAAACCAGCTAGACCTTC+GGG | - | chr4.4:18082344-18082363 | MS.gene34981:intron | 45.0% | |
| ATGATCAAGAGGAGACAGGA+TGG | - | chr4.4:18080594-18080613 | MS.gene34981:CDS | 45.0% | |
| ATTGCTGGGTCACAAATTGG+AGG | + | chr4.4:18082607-18082626 | None:intergenic | 45.0% | |
| CAAAAGAAGAACCGTCACAC+AGG | + | chr4.4:18080377-18080396 | None:intergenic | 45.0% | |
| CACATCACTTGGAGATTCAC+TGG | - | chr4.4:18080335-18080354 | MS.gene34981:intron | 45.0% | |
| CACATGCTCCTTGATGTTGA+GGG | + | chr4.4:18082143-18082162 | None:intergenic | 45.0% | |
| CACTTGGGGTTTCTGATCAT+AGG | - | chr4.4:18083317-18083336 | MS.gene34981:intron | 45.0% | |
| CAGAAGATCATGAATGGTGG+TGG | - | chr4.4:18081519-18081538 | MS.gene34981:intron | 45.0% | |
| CAGAGTGAATAACTGAGTGC+CGG | + | chr4.4:18080687-18080706 | None:intergenic | 45.0% | |
| CAGTGAATCTCCAAGTGATG+TGG | + | chr4.4:18080337-18080356 | None:intergenic | 45.0% | |
| CCGACTTTATTGGCGTAAAG+AGG | + | chr4.4:18078294-18078313 | None:intergenic | 45.0% | |
| CGCAAATTGTGCCAAAAGGA+AGG | + | chr4.4:18081163-18081182 | None:intergenic | 45.0% | |
| CGTCACACAGGAGTTTATGA+TGG | + | chr4.4:18080365-18080384 | None:intergenic | 45.0% | |
| CTATGATCAGAAACCCCAAG+TGG | + | chr4.4:18083319-18083338 | None:intergenic | 45.0% | |
| CTCCCATGTCAACACAATTG+AGG | + | chr4.4:18083581-18083600 | None:intergenic | 45.0% | |
| CTCGGGGATATTTAGTAGTG+CGG | + | chr4.4:18081280-18081299 | None:intergenic | 45.0% | |
| CTGCAGAAGATCATGAATGG+TGG | - | chr4.4:18081516-18081535 | MS.gene34981:intron | 45.0% | |
| CTTCAAGACACGCATGAGAA+TGG | + | chr4.4:18080416-18080435 | None:intergenic | 45.0% | |
| CTTGTGTTAGGTGGAATTGC+AGG | - | chr4.4:18081221-18081240 | MS.gene34981:intron | 45.0% | |
| CTTTCTCATGACCTGGCATT+CGG | + | chr4.4:18079856-18079875 | None:intergenic | 45.0% | |
| GAAAGCCTTGAGTGTAGGTT+AGG | - | chr4.4:18082560-18082579 | MS.gene34981:intron | 45.0% | |
| GACCTTCCATTCTGTGTAAC+AGG | - | chr4.4:18078531-18078550 | MS.gene34981:intron | 45.0% | |
| GAGAAATTCCACCTCTTCCT+TGG | - | chr4.4:18081297-18081316 | MS.gene34981:intron | 45.0% | |
| GAGCCAATTCTCACTAGACA+AGG | + | chr4.4:18082973-18082992 | None:intergenic | 45.0% | |
| GATAGTCCTAATATGGACGC+TGG | - | chr4.4:18081184-18081203 | MS.gene34981:CDS | 45.0% | |
| GATTGAAATCAGTGCCCGTA+TGG | - | chr4.4:18080180-18080199 | MS.gene34981:intron | 45.0% | |
| GCAAGTTAATCAGTTCCGAG+AGG | - | chr4.4:18079997-18080016 | MS.gene34981:intron | 45.0% | |
| GGATATTTAGTAGTGCGGAC+AGG | + | chr4.4:18081275-18081294 | None:intergenic | 45.0% | |
| GTATTCTATCCCTACAACCG+AGG | - | chr4.4:18080847-18080866 | MS.gene34981:CDS | 45.0% | |
| GTTCCGAGAGGCAGTTAAAA+AGG | - | chr4.4:18080009-18080028 | MS.gene34981:intron | 45.0% | |
| TCAGGTCAACCACAGAATGA+GGG | + | chr4.4:18080207-18080226 | None:intergenic | 45.0% | |
| TCGCCATTACTTGTGTTAGG+TGG | - | chr4.4:18081212-18081231 | MS.gene34981:CDS | 45.0% | |
| TCTTTGTCCGCCACATATAC+CGG | - | chr4.4:18083822-18083841 | MS.gene34981:CDS | 45.0% | |
| TGTCTTCGACTCTATGTAGG+GGG | - | chr4.4:18081855-18081874 | MS.gene34981:CDS | 45.0% | |
| TTAGTATAAGGGTAGGGCCA+TGG | - | chr4.4:18083172-18083191 | MS.gene34981:intron | 45.0% | |
| TTCCTCGTCTTGAGCATATC+TGG | + | chr4.4:18080567-18080586 | None:intergenic | 45.0% | |
| ! | ACATTCACGGCGATGTTTTC+CGG | - | chr4.4:18080621-18080640 | MS.gene34981:CDS | 45.0% |
| ! | ACTTGATGGACCGGTATATG+TGG | + | chr4.4:18083835-18083854 | None:intergenic | 45.0% |
| ! | GTGAAAGGGACCGACTTTAT+TGG | + | chr4.4:18078304-18078323 | None:intergenic | 45.0% |
| ! | GTGACGGTTCTTCTTTTGAC+TGG | - | chr4.4:18080379-18080398 | MS.gene34981:intron | 45.0% |
| ! | TACGATGACTTGCCAATCTG+GGG | - | chr4.4:18080052-18080071 | MS.gene34981:intron | 45.0% |
| ! | TAGCTGCTGTTTGACAACAC+TGG | + | chr4.4:18079536-18079555 | None:intergenic | 45.0% |
| ! | TGTCTAGTGAGAATTGGCTC+TGG | - | chr4.4:18082973-18082992 | MS.gene34981:intron | 45.0% |
| !! | AAGATCATGAATGGTGGTGG+AGG | - | chr4.4:18081522-18081541 | MS.gene34981:intron | 45.0% |
| AAACCCTGCCATTGCCATCT+GGG | + | chr4.4:18081339-18081358 | None:intergenic | 50.0% | |
| AAATCTGGACCGGTTGAACC+GGG | + | chr4.4:18082499-18082518 | None:intergenic | 50.0% | |
| AATGAGTGTGTCCGAATGCC+AGG | - | chr4.4:18079842-18079861 | MS.gene34981:intron | 50.0% | |
| ACAACGCCACTAGAGGTTTC+TGG | + | chr4.4:18079065-18079084 | None:intergenic | 50.0% | |
| ACCAAGGGCAGCTGCAAATA+TGG | + | chr4.4:18080663-18080682 | None:intergenic | 50.0% | |
| ATCGGACCTGGGATTGTGAA+AGG | + | chr4.4:18078319-18078338 | None:intergenic | 50.0% | |
| ATTGGGCTCCCTCAACATCA+AGG | - | chr4.4:18082132-18082151 | MS.gene34981:CDS | 50.0% | |
| CACAGAATGAGGGTCCATAC+GGG | + | chr4.4:18080197-18080216 | None:intergenic | 50.0% | |
| CACCAGATATGCTCAAGACG+AGG | - | chr4.4:18080562-18080581 | MS.gene34981:CDS | 50.0% | |
| CCACAGAATGAGGGTCCATA+CGG | + | chr4.4:18080198-18080217 | None:intergenic | 50.0% | |
| CGTCACTGCTTTCATCACTG+TGG | - | chr4.4:18081472-18081491 | MS.gene34981:intron | 50.0% | |
| CTGCAAGAAGACGCTCACAA+GGG | - | chr4.4:18079973-18079992 | MS.gene34981:intron | 50.0% | |
| GAAAAACATGGGGGGACTTG+AGG | - | chr4.4:18083283-18083302 | MS.gene34981:intron | 50.0% | |
| GCTGATGATCAAGAGGAGAC+AGG | - | chr4.4:18080590-18080609 | MS.gene34981:CDS | 50.0% | |
| GGAAAAGAGGGCCACAAAAG+AGG | + | chr4.4:18081088-18081107 | None:intergenic | 50.0% | |
| GGAAGAGGTGGAATTTCTCG+GGG | + | chr4.4:18081296-18081315 | None:intergenic | 50.0% | |
| GGAAGCTGCTGATGATCAAG+AGG | - | chr4.4:18080583-18080602 | MS.gene34981:CDS | 50.0% | |
| GTCAGGTCAACCACAGAATG+AGG | + | chr4.4:18080208-18080227 | None:intergenic | 50.0% | |
| GTCTTCGACTCTATGTAGGG+GGG | - | chr4.4:18081856-18081875 | MS.gene34981:CDS | 50.0% | |
| TACATGGCCTGCATCTGCTA+TGG | - | chr4.4:18083755-18083774 | MS.gene34981:CDS | 50.0% | |
| TCAAACCAGCTAGACCTTCG+GGG | - | chr4.4:18082345-18082364 | MS.gene34981:intron | 50.0% | |
| TCCATATTTGCAGCTGCCCT+TGG | - | chr4.4:18080659-18080678 | MS.gene34981:CDS | 50.0% | |
| TCCGATCATCGTTACAGCGA+CGG | - | chr4.4:18078258-18078277 | MS.gene34981:CDS | 50.0% | |
| TCGGACCTGGGATTGTGAAA+GGG | + | chr4.4:18078318-18078337 | None:intergenic | 50.0% | |
| TCTGCAAGAAGACGCTCACA+AGG | - | chr4.4:18079972-18079991 | MS.gene34981:intron | 50.0% | |
| TCTTCGACTCTATGTAGGGG+GGG | - | chr4.4:18081857-18081876 | MS.gene34981:CDS | 50.0% | |
| TTCCACCTCTTCCTTGGTAC+AGG | - | chr4.4:18081303-18081322 | MS.gene34981:intron | 50.0% | |
| TTCTGTGGTTGACCTGACTG+AGG | - | chr4.4:18080210-18080229 | MS.gene34981:intron | 50.0% | |
| TTGCCCATGGGTTCATACCA+TGG | + | chr4.4:18083192-18083211 | None:intergenic | 50.0% | |
| TTTCTCATGCTCGGTAGCGT+AGG | - | chr4.4:18083782-18083801 | MS.gene34981:CDS | 50.0% | |
| ! | AAAGACTGAAGCGCTTGGTG+AGG | - | chr4.4:18079877-18079896 | MS.gene34981:intron | 50.0% |
| ! | CTGACAGGATGCCTCTTTTG+TGG | - | chr4.4:18081074-18081093 | MS.gene34981:intron | 50.0% |
| ! | GCTCTCACATCTGGAATTGC+TGG | - | chr4.4:18080901-18080920 | MS.gene34981:CDS | 50.0% |
| ! | GTAACGATGATCGGAGGCAT+CGG | + | chr4.4:18078253-18078272 | None:intergenic | 50.0% |
| ! | TGATGGACCGGTATATGTGG+CGG | + | chr4.4:18083832-18083851 | None:intergenic | 50.0% |
| !! | ATAACTGAGTGCCGGAACCA+AGG | + | chr4.4:18080679-18080698 | None:intergenic | 50.0% |
| !! | ATATGTGGCGGACAAAGAGC+AGG | + | chr4.4:18083820-18083839 | None:intergenic | 50.0% |
| !! | TAACTGAGTGCCGGAACCAA+GGG | + | chr4.4:18080678-18080697 | None:intergenic | 50.0% |
| !! | TATGTGGCGGACAAAGAGCA+GGG | + | chr4.4:18083819-18083838 | None:intergenic | 50.0% |
| !! | TCTGACTGTTGTAATGGGCC+TGG | - | chr4.4:18079156-18079175 | MS.gene34981:intron | 50.0% |
| AACCCTGCCATTGCCATCTG+GGG | + | chr4.4:18081338-18081357 | None:intergenic | 55.0% | |
| AGGGCCATGGTATGAACCCA+TGG | - | chr4.4:18083185-18083204 | MS.gene34981:intron | 55.0% | |
| ATTCCCCAGATGGCAATGGC+AGG | - | chr4.4:18081332-18081351 | MS.gene34981:intron | 55.0% | |
| CACCATTCCCCAGATGGCAA+TGG | - | chr4.4:18081328-18081347 | MS.gene34981:intron | 55.0% | |
| CACGCATGAGAATGGTTGCC+AGG | + | chr4.4:18080408-18080427 | None:intergenic | 55.0% | |
| CAGCGAGAAGAGAGATCAGC+AGG | + | chr4.4:18078215-18078234 | None:intergenic | 55.0% | |
| CAGTTCAACCATCACCCCGA+AGG | + | chr4.4:18082362-18082381 | None:intergenic | 55.0% | |
| CCGTATGGACCCTCATTCTG+TGG | - | chr4.4:18080195-18080214 | MS.gene34981:intron | 55.0% | |
| CGAGAAGAGAGATCAGCAGG+TGG | + | chr4.4:18078212-18078231 | None:intergenic | 55.0% | |
| CTCCTGTACCAAGGAAGAGG+TGG | + | chr4.4:18081308-18081327 | None:intergenic | 55.0% | |
| CTTCGACTCTATGTAGGGGG+GGG | - | chr4.4:18081858-18081877 | MS.gene34981:CDS | 55.0% | |
| GAAACCCTGCCATTGCCATC+TGG | + | chr4.4:18081340-18081359 | None:intergenic | 55.0% | |
| GATCAGAAACCCCAAGTGGC+AGG | + | chr4.4:18083315-18083334 | None:intergenic | 55.0% | |
| GCCGTCGCTGTAACGATGAT+CGG | + | chr4.4:18078262-18078281 | None:intergenic | 55.0% | |
| GGAATGGTGCTCCTGTACCA+AGG | + | chr4.4:18081317-18081336 | None:intergenic | 55.0% | |
| GGGCCATGGTATGAACCCAT+GGG | - | chr4.4:18083186-18083205 | MS.gene34981:intron | 55.0% | |
| GGTTGACCTGACTGAGGACA+GGG | - | chr4.4:18080216-18080235 | MS.gene34981:intron | 55.0% | |
| GTCGCTGTAACGATGATCGG+AGG | + | chr4.4:18078259-18078278 | None:intergenic | 55.0% | |
| GTGCTCCTGTACCAAGGAAG+AGG | + | chr4.4:18081311-18081330 | None:intergenic | 55.0% | |
| TAGTAGTGCGGACAGGTGCT+TGG | + | chr4.4:18081268-18081287 | None:intergenic | 55.0% | |
| TCGGTCCCTTTCACAATCCC+AGG | - | chr4.4:18078310-18078329 | MS.gene34981:CDS | 55.0% | |
| TGCCATTGCCATCTGGGGAA+TGG | + | chr4.4:18081333-18081352 | None:intergenic | 55.0% | |
| TGGTTGACCTGACTGAGGAC+AGG | - | chr4.4:18080215-18080234 | MS.gene34981:intron | 55.0% | |
| TTCCCCAGATGGCAATGGCA+GGG | - | chr4.4:18081333-18081352 | MS.gene34981:intron | 55.0% | |
| TTCGACTCTATGTAGGGGGG+GGG | - | chr4.4:18081859-18081878 | MS.gene34981:CDS | 55.0% | |
| TTTGCAGCTGCCCTTGGTTC+CGG | - | chr4.4:18080665-18080684 | MS.gene34981:CDS | 55.0% | |
| ! | CTTCGGGGTGATGGTTGAAC+TGG | - | chr4.4:18082360-18082379 | MS.gene34981:intron | 55.0% |
| ! | GCAACTGCTGCCCTTCCTTT+TGG | - | chr4.4:18081149-18081168 | MS.gene34981:CDS | 55.0% |
| !! | GCGCTTGGTGAGGTGTTGAA+TGG | - | chr4.4:18079887-18079906 | MS.gene34981:intron | 55.0% |
| AAACCCCAAGTGGCAGGCCA+AGG | + | chr4.4:18083309-18083328 | None:intergenic | 60.0% | |
| AGGCTGCTTCCCGGTTCAAC+CGG | - | chr4.4:18082487-18082506 | MS.gene34981:intron | 60.0% | |
| CAGCTAGACCTTCGGGGTGA+TGG | - | chr4.4:18082351-18082370 | MS.gene34981:intron | 60.0% | |
| CATCACCCCGAAGGTCTAGC+TGG | + | chr4.4:18082353-18082372 | None:intergenic | 60.0% | |
| CCACTTCCCTGTCCTCAGTC+AGG | + | chr4.4:18080225-18080244 | None:intergenic | 60.0% | |
| CCTGACTGAGGACAGGGAAG+TGG | - | chr4.4:18080222-18080241 | MS.gene34981:intron | 60.0% | |
| GGACAAAGAGCAGGGAGGCA+CGG | + | chr4.4:18083811-18083830 | None:intergenic | 60.0% | |
| TCGACTCTATGTAGGGGGGG+GGG | - | chr4.4:18081860-18081879 | MS.gene34981:CDS | 60.0% | |
| ! | TTGCTAGTGTCTGGGGCCAC+AGG | - | chr4.4:18081399-18081418 | MS.gene34981:CDS | 60.0% |
| !! | CAGGAGCACCATTCCCCAGA+TGG | - | chr4.4:18081322-18081341 | MS.gene34981:intron | 60.0% |
| ACTCTATGTAGGGGGGGGGG+GGG | - | chr4.4:18081863-18081882 | MS.gene34981:CDS | 65.0% | |
| CATGGGGGGACTTGAGGCCT+TGG | - | chr4.4:18083289-18083308 | MS.gene34981:intron | 65.0% | |
| CGACTCTATGTAGGGGGGGG+GGG | - | chr4.4:18081861-18081880 | MS.gene34981:CDS | 65.0% | |
| GACTCTATGTAGGGGGGGGG+GGG | - | chr4.4:18081862-18081881 | MS.gene34981:CDS | 65.0% | |
| TGAGGCCTTGGCCTGCCACT+TGG | - | chr4.4:18083301-18083320 | MS.gene34981:intron | 65.0% | |
| ! | AGGCCTTGGCCTGCCACTTG+GGG | - | chr4.4:18083303-18083322 | MS.gene34981:intron | 65.0% |
| ! | GAGGCCTTGGCCTGCCACTT+GGG | - | chr4.4:18083302-18083321 | MS.gene34981:intron | 65.0% |
| ! | GGCATCGGATCTGACGCGAG+TGG | + | chr4.4:18078238-18078257 | None:intergenic | 65.0% |
| !! | GTGGCGGACAAAGAGCAGGG+AGG | + | chr4.4:18083816-18083835 | None:intergenic | 65.0% |
| CTCTATGTAGGGGGGGGGGG+GGG | - | chr4.4:18081864-18081883 | MS.gene34981:CDS | 70.0% | |
| TCTATGTAGGGGGGGGGGGG+GGG | - | chr4.4:18081865-18081884 | MS.gene34981:CDS | 70.0% | |
| CTATGTAGGGGGGGGGGGGG+GGG | - | chr4.4:18081866-18081885 | MS.gene34981:CDS | 75.0% | |
| TATGTAGGGGGGGGGGGGGG+GGG | - | chr4.4:18081867-18081886 | MS.gene34981:CDS | 75.0% | |
| ! | ATGTAGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081868-18081887 | MS.gene34981:CDS | 80.0% |
| ! | TGTAGGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081869-18081888 | MS.gene34981:CDS | 85.0% |
| ! | GTAGGGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081870-18081889 | MS.gene34981:CDS | 90.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081871-18081890 | MS.gene34981:CDS | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr4.4:18081872-18081891 | MS.gene34981:CDS | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 18078186 | 18083862 | 18078186 | ID=MS.gene34981 |
| chr4.4 | mRNA | 18078186 | 18083862 | 18078186 | ID=MS.gene34981.t1;Parent=MS.gene34981 |
| chr4.4 | exon | 18083717 | 18083862 | 18083717 | ID=MS.gene34981.t1.exon1;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18083717 | 18083862 | 18083717 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18083496 | 18083536 | 18083496 | ID=MS.gene34981.t1.exon2;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18083496 | 18083536 | 18083496 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18081599 | 18082184 | 18081599 | ID=MS.gene34981.t1.exon3;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18081599 | 18082184 | 18081599 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18081343 | 18081480 | 18081343 | ID=MS.gene34981.t1.exon4;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18081343 | 18081480 | 18081343 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18081079 | 18081235 | 18081079 | ID=MS.gene34981.t1.exon5;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18081079 | 18081235 | 18081079 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18080505 | 18080989 | 18080505 | ID=MS.gene34981.t1.exon6;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18080505 | 18080989 | 18080505 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| chr4.4 | exon | 18078186 | 18078405 | 18078186 | ID=MS.gene34981.t1.exon7;Parent=MS.gene34981.t1 |
| chr4.4 | CDS | 18078186 | 18078405 | 18078186 | ID=cds.MS.gene34981.t1;Parent=MS.gene34981.t1 |
| Gene Sequence |
| Protein sequence |
