Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006545.t1 | XP_003607418.2 | 95.9 | 490 | 14 | 1 | 3 | 492 | 1 | 484 | 9.50E-258 | 899 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006545.t1 | Q9LW77 | 75.5 | 413 | 97 | 3 | 3 | 412 | 1 | 412 | 6.4e-170 | 598.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006545.t1 | A0A072UNL4 | 95.9 | 490 | 14 | 1 | 3 | 492 | 1 | 484 | 6.8e-258 | 899.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene006545 | PPI |
| MS.gene052128 | MS.gene006545 | PPI |
| MS.gene30950 | MS.gene006545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006545.t1 | MTR_4g077800 | 95.918 | 490 | 14 | 1 | 3 | 492 | 1 | 484 | 0.0 | 982 |
| MS.gene006545.t1 | MTR_4g077800 | 95.918 | 490 | 14 | 1 | 3 | 492 | 1 | 484 | 0.0 | 978 |
| MS.gene006545.t1 | MTR_5g007710 | 77.062 | 497 | 98 | 4 | 3 | 489 | 1 | 491 | 0.0 | 772 |
| MS.gene006545.t1 | MTR_5g007710 | 84.158 | 404 | 62 | 1 | 3 | 406 | 1 | 402 | 0.0 | 721 |
| MS.gene006545.t1 | MTR_4g077703 | 94.937 | 79 | 4 | 0 | 414 | 492 | 25 | 103 | 1.63e-47 | 160 |
| MS.gene006545.t1 | MTR_3g007760 | 26.087 | 368 | 216 | 9 | 31 | 358 | 57 | 408 | 1.61e-26 | 113 |
| MS.gene006545.t1 | MTR_3g007760 | 26.769 | 325 | 190 | 8 | 64 | 347 | 57 | 374 | 1.82e-24 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006545.t1 | AT3G16090 | 75.545 | 413 | 97 | 3 | 3 | 412 | 1 | 412 | 0.0 | 645 |
| MS.gene006545.t1 | AT1G65040 | 71.259 | 421 | 118 | 2 | 3 | 420 | 1 | 421 | 0.0 | 633 |
| MS.gene006545.t1 | AT1G65040 | 68.171 | 421 | 108 | 3 | 3 | 420 | 1 | 398 | 0.0 | 594 |
| MS.gene006545.t1 | AT1G65040 | 70.358 | 307 | 88 | 2 | 117 | 420 | 44 | 350 | 1.20e-159 | 458 |
| MS.gene006545.t1 | AT1G65040 | 66.007 | 303 | 77 | 3 | 121 | 420 | 1 | 280 | 2.47e-141 | 409 |
| MS.gene006545.t1 | AT1G65040 | 72.314 | 242 | 64 | 2 | 182 | 420 | 1 | 242 | 2.39e-125 | 367 |
| MS.gene006545.t1 | AT1G65040 | 75.330 | 227 | 55 | 1 | 179 | 404 | 24 | 250 | 9.24e-125 | 364 |
| MS.gene006545.t1 | AT4G25230 | 27.322 | 366 | 221 | 8 | 6 | 332 | 20 | 379 | 3.28e-26 | 112 |
| MS.gene006545.t1 | AT4G25230 | 27.322 | 366 | 221 | 8 | 6 | 332 | 20 | 379 | 3.28e-26 | 112 |
| MS.gene006545.t1 | AT4G25230 | 27.322 | 366 | 221 | 8 | 6 | 332 | 20 | 379 | 3.28e-26 | 112 |
| MS.gene006545.t1 | AT5G51450 | 25.661 | 378 | 241 | 8 | 27 | 367 | 42 | 416 | 6.12e-21 | 96.7 |
| MS.gene006545.t1 | AT5G51450 | 25.661 | 378 | 241 | 8 | 27 | 367 | 42 | 416 | 6.58e-21 | 96.3 |
| MS.gene006545.t1 | AT5G01960 | 33.333 | 135 | 84 | 4 | 216 | 346 | 285 | 417 | 1.32e-12 | 70.1 |
| MS.gene006545.t1 | AT2G44581 | 39.241 | 79 | 43 | 2 | 267 | 341 | 44 | 121 | 6.56e-11 | 60.8 |
Find 108 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTACATGTGCTTCTTTC+TGG | 0.148510 | 4.4:-33061698 | MS.gene006545:CDS |
| GTGTTCCTTTGCACTTAATA+AGG | 0.236769 | 4.4:-33060757 | MS.gene006545:CDS |
| GGGTTCCTTCTTCTTCTTGA+TGG | 0.263358 | 4.4:-33062309 | MS.gene006545:CDS |
| CTATGTCAGTGACATGCTTA+TGG | 0.292617 | 4.4:-33061791 | MS.gene006545:CDS |
| ATTTGATTTATCAGAAACTA+TGG | 0.304267 | 4.4:-33060779 | MS.gene006545:intron |
| TCTAATAATGCTGAGCTTGA+TGG | 0.304456 | 4.4:-33058058 | MS.gene006545:CDS |
| GGGAGCTATACGAGACATTT+AGG | 0.314554 | 4.4:-33060736 | MS.gene006545:CDS |
| ACTCACGAATTAAGCTCTTC+AGG | 0.328266 | 4.4:+33060632 | None:intergenic |
| CATGCAGCTCACATTACTTA+TGG | 0.329614 | 4.4:-33057926 | MS.gene006545:CDS |
| GGATTTCTCTATTACATTCC+TGG | 0.340456 | 4.4:-33062454 | MS.gene006545:CDS |
| AGCTCTTCAGGGGTTGCATC+TGG | 0.367949 | 4.4:+33060644 | None:intergenic |
| GCAAGCATGGAGGGAGGTTA+TGG | 0.389288 | 4.4:-33062508 | MS.gene006545:CDS |
| TGAACCACTGATCTTTGAAC+CGG | 0.391156 | 4.4:+33058085 | None:intergenic |
| AAGAAGCACCAAACTGATCT+TGG | 0.399595 | 4.4:+33062629 | None:intergenic |
| TACATTCCTGGCCATGGTTA+CGG | 0.401139 | 4.4:-33062442 | MS.gene006545:CDS |
| CTGGTTGTCCCATCAGAAAA+TGG | 0.403116 | 4.4:-33060397 | MS.gene006545:CDS |
| TGCAATTACTATCTTTAGAC+AGG | 0.408286 | 4.4:-33062475 | MS.gene006545:CDS |
| AATCAAGGCTTTGCATTGGT+TGG | 0.413236 | 4.4:-33062409 | MS.gene006545:CDS |
| CTCTATTACATTCCTGGCCA+TGG | 0.413794 | 4.4:-33062448 | MS.gene006545:CDS |
| AGACCATTGCCGGATAAAAC+TGG | 0.414204 | 4.4:+33062664 | None:intergenic |
| TGTTCCTTTGCACTTAATAA+GGG | 0.430405 | 4.4:-33060756 | MS.gene006545:CDS |
| AGCAACTTCCAAGATCAGTT+TGG | 0.433214 | 4.4:-33062637 | MS.gene006545:CDS |
| TACGGCACTCTTGTTAATCA+AGG | 0.437977 | 4.4:-33062424 | MS.gene006545:CDS |
| ATGTTCATTGCCTCCGATCA+TGG | 0.438328 | 4.4:-33060456 | MS.gene006545:CDS |
| ACTAGCAAGCAAGCAGGCTT+CGG | 0.442028 | 4.4:-33062256 | MS.gene006545:CDS |
| CTCACGAATTAAGCTCTTCA+GGG | 0.447017 | 4.4:+33060633 | None:intergenic |
| TATGTGGCAGTTAACTAAAA+AGG | 0.449529 | 4.4:-33062577 | MS.gene006545:CDS |
| CATGCTTATGGAGGGGCAAT+GGG | 0.466130 | 4.4:-33061779 | MS.gene006545:CDS |
| GTTGCTAAATAGACCATTGC+CGG | 0.467482 | 4.4:+33062654 | None:intergenic |
| ATTGCTTACCATGCAAAAGT+TGG | 0.470036 | 4.4:+33058791 | None:intergenic |
| CAACCAGTGCTCTGCAGGTA+GGG | 0.482864 | 4.4:+33060413 | None:intergenic |
| TGGGACAACCAGTGCTCTGC+AGG | 0.483896 | 4.4:+33060408 | None:intergenic |
| TCCAAGTAAAACGTGAAGAC+TGG | 0.484698 | 4.4:+33061748 | None:intergenic |
| GGAGAAGAGGATGCATTCAT+TGG | 0.484782 | 4.4:+33057983 | None:intergenic |
| GAAAATGGAACAACTGCTAC+GGG | 0.489223 | 4.4:-33060382 | MS.gene006545:CDS |
| ACATGCTTATGGAGGGGCAA+TGG | 0.490906 | 4.4:-33061780 | MS.gene006545:CDS |
| CTCATTAAGCCTCTCAACCT+CGG | 0.492729 | 4.4:+33062530 | None:intergenic |
| TGTTAATCAAGGCTTTGCAT+TGG | 0.492811 | 4.4:-33062413 | MS.gene006545:CDS |
| TCTTAGTTTAATTGCCACTT+TGG | 0.499449 | 4.4:-33062718 | MS.gene006545:CDS |
| TTATGGAGAGGGATCCCAGC+TGG | 0.501618 | 4.4:-33057909 | MS.gene006545:CDS |
| GCTCAAACTGAGGTTGGCGA+TGG | 0.505128 | 4.4:-33058908 | MS.gene006545:CDS |
| AGCTCAGCTCAAACTGAGGT+TGG | 0.506186 | 4.4:-33058914 | MS.gene006545:CDS |
| TGGCTACACTCTTTATCCCC+CGG | 0.506814 | 4.4:-33058104 | MS.gene006545:CDS |
| CTCAAACTGAGGTTGGCGAT+GGG | 0.510685 | 4.4:-33058907 | MS.gene006545:CDS |
| TCTCAAACTTACAGCTCCCC+TGG | 0.510823 | 4.4:-33058124 | MS.gene006545:intron |
| AAGAGAACAGGGGAAGGCAC+TGG | 0.518999 | 4.4:-33058938 | MS.gene006545:intron |
| CAAAAGCAGTTTGTGATCCC+TGG | 0.521828 | 4.4:-33058010 | MS.gene006545:CDS |
| ATGCGGTTGCAGACATATGC+GGG | 0.533450 | 4.4:-33062741 | MS.gene006545:CDS |
| TTTGGTGCTTCTTCTCAACA+TGG | 0.534645 | 4.4:-33062619 | MS.gene006545:CDS |
| ACAACCAGTGCTCTGCAGGT+AGG | 0.540446 | 4.4:+33060412 | None:intergenic |
| GCATTTACTAGCAAGCAAGC+AGG | 0.546006 | 4.4:-33062262 | MS.gene006545:CDS |
| AGCTCCCTTATTAAGTGCAA+AGG | 0.546217 | 4.4:+33060752 | None:intergenic |
| AACTGAGGTTGGCGATGGGG+TGG | 0.547346 | 4.4:-33058903 | MS.gene006545:CDS |
| TTCGAGAAGCCGAGGTTGAG+AGG | 0.548154 | 4.4:-33062539 | MS.gene006545:CDS |
| TACCATGCAAAAGTTGGAGA+AGG | 0.548413 | 4.4:+33058797 | None:intergenic |
| ATGATATGTAATAGCCAAAG+TGG | 0.552176 | 4.4:+33062704 | None:intergenic |
| AAGCGCCATCAAGAAGAAGA+AGG | 0.554091 | 4.4:+33062304 | None:intergenic |
| TTGCCCTACCTGCAGAGCAC+TGG | 0.558354 | 4.4:-33060416 | MS.gene006545:CDS |
| GATGCATTCATTGGTCCACC+AGG | 0.558594 | 4.4:+33057992 | None:intergenic |
| GTCAGTGACATGCTTATGGA+GGG | 0.559139 | 4.4:-33061787 | MS.gene006545:CDS |
| AAATGGAACAACTGCTACGG+GGG | 0.559604 | 4.4:-33060380 | MS.gene006545:CDS |
| AGAAAATGGAACAACTGCTA+CGG | 0.562510 | 4.4:-33060383 | MS.gene006545:CDS |
| GAACCACTGATCTTTGAACC+GGG | 0.563320 | 4.4:+33058086 | None:intergenic |
| AGAGTGCCGTAACCATGGCC+AGG | 0.565822 | 4.4:+33062436 | None:intergenic |
| GCTTAATGAGCAAGCATGGA+GGG | 0.570543 | 4.4:-33062517 | MS.gene006545:CDS |
| GGAACATAGAAGCTTTGCAC+TGG | 0.576270 | 4.4:+33057962 | None:intergenic |
| GAAGCTTTGCACTGGAGAAG+AGG | 0.582556 | 4.4:+33057970 | None:intergenic |
| ACCACTGATCTTTGAACCGG+GGG | 0.582606 | 4.4:+33058088 | None:intergenic |
| AGAGGCTTAATGAGCAAGCA+TGG | 0.584570 | 4.4:-33062521 | MS.gene006545:CDS |
| GCTGCCGCTCTAGCCATGAT+CGG | 0.589627 | 4.4:+33060443 | None:intergenic |
| CTCTTCACGACAGATGATGC+AGG | 0.590049 | 4.4:+33060519 | None:intergenic |
| TCACTTCTAACATGAATGAT+CGG | 0.592324 | 4.4:-33060670 | MS.gene006545:CDS |
| TATGGAGAGGGATCCCAGCT+GGG | 0.592564 | 4.4:-33057908 | MS.gene006545:CDS |
| TAAAGATAGTAATTGCAAAG+AGG | 0.597781 | 4.4:+33062481 | None:intergenic |
| GCCGCTCTAGCCATGATCGG+AGG | 0.598124 | 4.4:+33060446 | None:intergenic |
| GCTGCATGTGTTTGAGATGG+TGG | 0.598269 | 4.4:+33057941 | None:intergenic |
| TGGTTCTCTTCGAGAAGCCG+AGG | 0.599332 | 4.4:-33062547 | MS.gene006545:CDS |
| GGGGATAAAGAGTGTAGCCA+GGG | 0.600049 | 4.4:+33058107 | None:intergenic |
| TAACAAGAGTGCCGTAACCA+TGG | 0.600859 | 4.4:+33062431 | None:intergenic |
| TAGTCATCATGTGTGTTATG+TGG | 0.603251 | 4.4:-33062593 | MS.gene006545:CDS |
| GCCTCCGATCATGGCTAGAG+CGG | 0.604085 | 4.4:-33060447 | MS.gene006545:CDS |
| GCTCACATTACTTATGGAGA+GGG | 0.608278 | 4.4:-33057920 | MS.gene006545:CDS |
| TGTCAGTGACATGCTTATGG+AGG | 0.609892 | 4.4:-33061788 | MS.gene006545:CDS |
| TGGCTTGTGATAATTTGAGT+CGG | 0.612752 | 4.4:-33058883 | MS.gene006545:CDS |
| TGGAAGCTCAGCTCAAACTG+AGG | 0.613121 | 4.4:-33058918 | MS.gene006545:CDS |
| GATGCGGTTGCAGACATATG+CGG | 0.622914 | 4.4:-33062742 | MS.gene006545:CDS |
| AACCACTGATCTTTGAACCG+GGG | 0.627402 | 4.4:+33058087 | None:intergenic |
| AGCTCACATTACTTATGGAG+AGG | 0.628005 | 4.4:-33057921 | MS.gene006545:CDS |
| ACCATGCAAAAGTTGGAGAA+GGG | 0.628689 | 4.4:+33058798 | None:intergenic |
| CAGTCAGATGCTCATCGACA+AGG | 0.633181 | 4.4:-33060343 | MS.gene006545:intron |
| TCACGAATTAAGCTCTTCAG+GGG | 0.633545 | 4.4:+33060634 | None:intergenic |
| TCAAACTGAGGTTGGCGATG+GGG | 0.640483 | 4.4:-33058906 | MS.gene006545:CDS |
| TCAGTGACATGCTTATGGAG+GGG | 0.644546 | 4.4:-33061786 | MS.gene006545:CDS |
| TGAGCTGCATGTGTTTGAGA+TGG | 0.654763 | 4.4:+33057938 | None:intergenic |
| TATCATGCATTTAACAGCAG+AGG | 0.656683 | 4.4:-33062687 | MS.gene006545:CDS |
| TGAGAGAACACAGACACGGA+AGG | 0.658650 | 4.4:+33062354 | None:intergenic |
| TGTCGATGAGCATCTGACTG+TGG | 0.667132 | 4.4:+33060346 | None:intergenic |
| GGCTTAATGAGCAAGCATGG+AGG | 0.669584 | 4.4:-33062518 | MS.gene006545:CDS |
| AAGCAGTTTGTGATCCCTGG+TGG | 0.673279 | 4.4:-33058007 | MS.gene006545:CDS |
| AATGGAACAACTGCTACGGG+GGG | 0.692034 | 4.4:-33060379 | MS.gene006545:CDS |
| GGGATAAAGAGTGTAGCCAG+GGG | 0.695029 | 4.4:+33058108 | None:intergenic |
| TAATGAGCAAGCATGGAGGG+AGG | 0.696339 | 4.4:-33062514 | MS.gene006545:CDS |
| AAAATGGAACAACTGCTACG+GGG | 0.697725 | 4.4:-33060381 | MS.gene006545:CDS |
| AACTTGAGAGAACACAGACA+CGG | 0.706706 | 4.4:+33062350 | None:intergenic |
| TCAAACAAAACTTCAGAACG+AGG | 0.709845 | 4.4:-33057882 | None:intergenic |
| AAGTGATCTTACGATAACGT+AGG | 0.711084 | 4.4:+33060687 | None:intergenic |
| ATGCATTCATTGGTCCACCA+GGG | 0.712072 | 4.4:+33057993 | None:intergenic |
| ACTGCAAAGAAGCTTCTATG+CGG | 0.744439 | 4.4:-33060490 | MS.gene006545:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGAATAAAAAAAATTAAC+GGG | + | chr4.4:33061146-33061165 | None:intergenic | 10.0% |
| !!! | ATGTTTAAATTATTTTTGAA+TGG | - | chr4.4:33061566-33061585 | MS.gene006545:intron | 10.0% |
| !!! | CAATATGTTATTTTTTAATT+CGG | + | chr4.4:33059321-33059340 | None:intergenic | 10.0% |
| !!! | TGTTTAAATTATTTTTGAAT+GGG | - | chr4.4:33061567-33061586 | MS.gene006545:intron | 10.0% |
| !! | AAAAAATGAAGAAATATAGT+TGG | - | chr4.4:33060981-33061000 | MS.gene006545:intron | 15.0% |
| !! | AAAAAGATGCAAAATAAATA+AGG | - | chr4.4:33060819-33060838 | MS.gene006545:intron | 15.0% |
| !! | AAAAGATGCAAAATAAATAA+GGG | - | chr4.4:33060820-33060839 | MS.gene006545:intron | 15.0% |
| !! | AAAATAAACAACATATACTA+TGG | + | chr4.4:33059046-33059065 | None:intergenic | 15.0% |
| !! | AAAGAAATAATTAATGTACT+TGG | - | chr4.4:33060852-33060871 | MS.gene006545:intron | 15.0% |
| !! | AAGAAAATTTATAAAATAGC+AGG | + | chr4.4:33061067-33061086 | None:intergenic | 15.0% |
| !! | AATTCTCTTTATAATGTTAT+AGG | - | chr4.4:33058702-33058721 | MS.gene006545:intron | 15.0% |
| !! | CAAAACTCTTAAATTAATAA+CGG | - | chr4.4:33061994-33062013 | MS.gene006545:intron | 15.0% |
| !! | CGAATTAAAAAATAACATAT+TGG | - | chr4.4:33059319-33059338 | MS.gene006545:intron | 15.0% |
| !! | TGTGAATTTAATGATAAATA+AGG | + | chr4.4:33060570-33060589 | None:intergenic | 15.0% |
| !!! | AAAATATTCGTACTTTTTTT+GGG | - | chr4.4:33061524-33061543 | MS.gene006545:intron | 15.0% |
| !!! | GTTTAAATTATTTTTGAATG+GGG | - | chr4.4:33061568-33061587 | MS.gene006545:intron | 15.0% |
| !!! | TAAAATATTCGTACTTTTTT+TGG | - | chr4.4:33061523-33061542 | MS.gene006545:intron | 15.0% |
| !!! | TAACTGTCTTTTTTATTTAT+TGG | - | chr4.4:33059618-33059637 | MS.gene006545:intron | 15.0% |
| !!! | TGAATCAATATTTTTAGATA+TGG | - | chr4.4:33060072-33060091 | MS.gene006545:intron | 15.0% |
| !! | AAAGGAAACAATCTTAATTT+AGG | + | chr4.4:33062202-33062221 | None:intergenic | 20.0% |
| !! | ACAACTACTTTAATAGTTTA+TGG | - | chr4.4:33060608-33060627 | MS.gene006545:intron | 20.0% |
| !! | GAAATTTGATTACTTTAATC+TGG | - | chr4.4:33061590-33061609 | MS.gene006545:intron | 20.0% |
| !! | GATTTAACATTTAAAGAGAA+AGG | + | chr4.4:33062220-33062239 | None:intergenic | 20.0% |
| !! | TAAATCAAATTAAAGTCAGA+AGG | + | chr4.4:33059844-33059863 | None:intergenic | 20.0% |
| !! | TCATTGAAAACATGTAAATT+TGG | + | chr4.4:33059162-33059181 | None:intergenic | 20.0% |
| !! | TCTTTACTATACAAATCTTA+TGG | + | chr4.4:33062303-33062322 | None:intergenic | 20.0% |
| !!! | AAATATTCGTACTTTTTTTG+GGG | - | chr4.4:33061525-33061544 | MS.gene006545:intron | 20.0% |
| !!! | AGTACGAATATTTTAGAATT+TGG | + | chr4.4:33061518-33061537 | None:intergenic | 20.0% |
| !!! | AGTATATTATTTCTAGGATA+CGG | - | chr4.4:33060947-33060966 | MS.gene006545:intron | 20.0% |
| !!! | ATTTGATTTATCAGAAACTA+TGG | - | chr4.4:33059854-33059873 | MS.gene006545:intron | 20.0% |
| !!! | GACAATTTTTTTTCTCAAAA+GGG | - | chr4.4:33060902-33060921 | MS.gene006545:intron | 20.0% |
| !!! | GGATTCTAAATATTGATTTT+TGG | - | chr4.4:33059340-33059359 | MS.gene006545:intron | 20.0% |
| !!! | TAAATATATGTTTCTATCTC+AGG | - | chr4.4:33058769-33058788 | MS.gene006545:intron | 20.0% |
| !!! | TATTTTGAAAGCATTTCAAA+TGG | - | chr4.4:33059060-33059079 | MS.gene006545:intron | 20.0% |
| !!! | TCACTTATAAACATTTTTTC+AGG | + | chr4.4:33061252-33061271 | None:intergenic | 20.0% |
| !!! | TGACATTGTTAATTTTACTA+TGG | - | chr4.4:33058466-33058485 | MS.gene006545:intron | 20.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | - | chr4.4:33060714-33060733 | MS.gene006545:CDS | 25.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | + | chr4.4:33060733-33060714 | None:intergenic | 25.0% |
| ! | AAATTCTCTAACATGATTTC+TGG | - | chr4.4:33058490-33058509 | MS.gene006545:intron | 25.0% |
| ! | AGAATCTGGATTTAAATTGT+AGG | - | chr4.4:33062126-33062145 | MS.gene006545:intron | 25.0% |
| ! | AGCTAAAACATCAAAAGAAA+AGG | + | chr4.4:33060483-33060502 | None:intergenic | 25.0% |
| ! | AGGACTAATCAGATTATTTA+AGG | - | chr4.4:33059294-33059313 | MS.gene006545:intron | 25.0% |
| ! | ATATGAAAAATGGAAAAGGT+GGG | - | chr4.4:33061931-33061950 | MS.gene006545:intron | 25.0% |
| ! | ATTAAAGTAGTTGTGACATT+TGG | + | chr4.4:33060602-33060621 | None:intergenic | 25.0% |
| ! | CATCATATGAAAAATGGAAA+AGG | - | chr4.4:33061927-33061946 | MS.gene006545:intron | 25.0% |
| ! | GTTATTTATTCATGGCTAAT+AGG | - | chr4.4:33059516-33059535 | MS.gene006545:intron | 25.0% |
| ! | TAAAGATAGTAATTGCAAAG+AGG | + | chr4.4:33058155-33058174 | None:intergenic | 25.0% |
| ! | TAAATTAACTCTCTCTCTTA+AGG | + | chr4.4:33060766-33060785 | None:intergenic | 25.0% |
| ! | TATTGACAACATATACACAT+AGG | - | chr4.4:33059244-33059263 | MS.gene006545:intron | 25.0% |
| ! | TCTCTTTATAATGTTATAGG+AGG | - | chr4.4:33058705-33058724 | MS.gene006545:intron | 25.0% |
| ! | TTATAATGTTATAGGAGGTT+TGG | - | chr4.4:33058710-33058729 | MS.gene006545:intron | 25.0% |
| !! | ACCAAATGAGTCTTATAATA+AGG | - | chr4.4:33060879-33060898 | MS.gene006545:intron | 25.0% |
| !! | CAAAATAAATAAGGGTATGT+TGG | - | chr4.4:33060828-33060847 | MS.gene006545:intron | 25.0% |
| !! | CAATTTTGTAGGATTTAGTT+AGG | - | chr4.4:33061295-33061314 | MS.gene006545:intron | 25.0% |
| !! | CACTAAAACATCAAAAGTTT+TGG | - | chr4.4:33060673-33060692 | MS.gene006545:CDS | 25.0% |
| !! | CCAAATGAGTCTTATAATAA+GGG | - | chr4.4:33060880-33060899 | MS.gene006545:intron | 25.0% |
| !! | GAGAAAAAAGCATAAAAAAC+AGG | + | chr4.4:33059777-33059796 | None:intergenic | 25.0% |
| !! | TCAAAAGGGTCTTATAATTA+GGG | - | chr4.4:33060916-33060935 | MS.gene006545:intron | 25.0% |
| !! | TGCATTTAGTCTAAAATTCA+GGG | + | chr4.4:33059477-33059496 | None:intergenic | 25.0% |
| !! | TTGCATTTAGTCTAAAATTC+AGG | + | chr4.4:33059478-33059497 | None:intergenic | 25.0% |
| !!! | AGTTCGAATCATATCTTTTT+TGG | - | chr4.4:33058302-33058321 | MS.gene006545:intron | 25.0% |
| !!! | CTCTAAAACATCAAAAGAAA+AGG | - | chr4.4:33060709-33060728 | MS.gene006545:CDS | 25.0% |
| !!! | GACAAAAATGTTTTAACTTC+TGG | + | chr4.4:33058672-33058691 | None:intergenic | 25.0% |
| !!! | GGACAATTTTTTTTCTCAAA+AGG | - | chr4.4:33060901-33060920 | MS.gene006545:intron | 25.0% |
| !!! | GGTTTAGTGTTATTTATTCA+TGG | - | chr4.4:33059508-33059527 | MS.gene006545:intron | 25.0% |
| !!! | GTTCGAATCATATCTTTTTT+GGG | - | chr4.4:33058303-33058322 | MS.gene006545:intron | 25.0% |
| !!! | TTAACTAAAAAGGTGTTTCT+TGG | - | chr4.4:33058066-33058085 | MS.gene006545:CDS | 25.0% |
| !!! | TTCGAATCATATCTTTTTTG+GGG | - | chr4.4:33058304-33058323 | MS.gene006545:intron | 25.0% |
| ACTAAATGCAAGAACATGTA+AGG | - | chr4.4:33059487-33059506 | MS.gene006545:intron | 30.0% | |
| ACTATTGCACTTTGTATATG+CGG | - | chr4.4:33061021-33061040 | MS.gene006545:intron | 30.0% | |
| ATCAAAAGAAAAGGAATGGA+GGG | - | chr4.4:33060718-33060737 | MS.gene006545:CDS | 30.0% | |
| ATCAAAAGAAAAGGAATGGA+GGG | + | chr4.4:33060737-33060718 | None:intergenic | 30.0% | |
| ATGAAGTTTAAATCATGCGA+GGG | + | chr4.4:33059001-33059020 | None:intergenic | 30.0% | |
| ATGATATGTAATAGCCAAAG+TGG | + | chr4.4:33057932-33057951 | None:intergenic | 30.0% | |
| ATTACGGAGATTAAGAAAGT+TGG | - | chr4.4:33060416-33060435 | MS.gene006545:CDS | 30.0% | |
| ATTTGGACATTAGCACTATT+TGG | + | chr4.4:33059145-33059164 | None:intergenic | 30.0% | |
| CAAAGATCATCTTAGATTCA+AGG | + | chr4.4:33062342-33062361 | None:intergenic | 30.0% | |
| CATATGAAAAATGGAAAAGG+TGG | - | chr4.4:33061930-33061949 | MS.gene006545:intron | 30.0% | |
| CCCTTATTATAAGACTCATT+TGG | + | chr4.4:33060883-33060902 | None:intergenic | 30.0% | |
| CTCTCTCATCATATGAAAAA+TGG | - | chr4.4:33061921-33061940 | MS.gene006545:intron | 30.0% | |
| CTGGATTTAAATTGTAGGAT+AGG | - | chr4.4:33062131-33062150 | MS.gene006545:intron | 30.0% | |
| TATGAAGTTTAAATCATGCG+AGG | + | chr4.4:33059002-33059021 | None:intergenic | 30.0% | |
| TATGTGGCAGTTAACTAAAA+AGG | - | chr4.4:33058056-33058075 | MS.gene006545:CDS | 30.0% | |
| TATTTATTGGACATGATACC+TGG | - | chr4.4:33059631-33059650 | MS.gene006545:intron | 30.0% | |
| TATTTGAGAAGGGGAAAAAA+AGG | + | chr4.4:33058441-33058460 | None:intergenic | 30.0% | |
| TCACTTCTAACATGAATGAT+CGG | - | chr4.4:33059963-33059982 | MS.gene006545:intron | 30.0% | |
| TGCAATTACTATCTTTAGAC+AGG | - | chr4.4:33058158-33058177 | MS.gene006545:intron | 30.0% | |
| TGTTCCTTTGCACTTAATAA+GGG | - | chr4.4:33059877-33059896 | MS.gene006545:intron | 30.0% | |
| TTTCTATGCAGTGAAATGTT+TGG | - | chr4.4:33062159-33062178 | MS.gene006545:intron | 30.0% | |
| ! | ATCTCCGTAATTTTTGCAAA+AGG | + | chr4.4:33060407-33060426 | None:intergenic | 30.0% |
| ! | ATTCTCTTTTCCTATCTTCA+AGG | + | chr4.4:33059550-33059569 | None:intergenic | 30.0% |
| ! | CTCAAAAGGGTCTTATAATT+AGG | - | chr4.4:33060915-33060934 | MS.gene006545:intron | 30.0% |
| ! | CTTTGTTTCTTGAAGTTACA+AGG | + | chr4.4:33062394-33062413 | None:intergenic | 30.0% |
| ! | GGAGGTAGTATATTATTTCT+AGG | - | chr4.4:33060941-33060960 | MS.gene006545:intron | 30.0% |
| ! | TCTTAGTTTAATTGCCACTT+TGG | - | chr4.4:33057915-33057934 | MS.gene006545:CDS | 30.0% |
| ! | TTCTCTTTTCCTATCTTCAA+GGG | + | chr4.4:33059549-33059568 | None:intergenic | 30.0% |
| ! | TTTATGGTGTTTTCCAACAA+GGG | - | chr4.4:33060624-33060643 | MS.gene006545:intron | 30.0% |
| !! | AAAATTGACTTGTAAGGGAA+GGG | + | chr4.4:33061282-33061301 | None:intergenic | 30.0% |
| !! | CCTACAAAATTGACTTGTAA+GGG | + | chr4.4:33061287-33061306 | None:intergenic | 30.0% |
| !! | TCCTACAAAATTGACTTGTA+AGG | + | chr4.4:33061288-33061307 | None:intergenic | 30.0% |
| !!! | ACTTCTCTTTTTGAGATGTA+AGG | - | chr4.4:33059736-33059755 | MS.gene006545:intron | 30.0% |
| !!! | AGAGCTCACATTTTTTTTGT+AGG | + | chr4.4:33061099-33061118 | None:intergenic | 30.0% |
| !!! | CTTCTCTTTTTGAGATGTAA+GGG | - | chr4.4:33059737-33059756 | MS.gene006545:intron | 30.0% |
| !!! | GAGCTCACATTTTTTTTGTA+GGG | + | chr4.4:33061098-33061117 | None:intergenic | 30.0% |
| !!! | GGCTTATTACTTTTAGAATC+TGG | - | chr4.4:33062112-33062131 | MS.gene006545:intron | 30.0% |
| !!! | GTTTTACTTGGAACTTGTTA+GGG | - | chr4.4:33058896-33058915 | MS.gene006545:CDS | 30.0% |
| !!! | TCTTTTGATGTTTTAGCTCT+TGG | - | chr4.4:33060485-33060504 | MS.gene006545:CDS | 30.0% |
| AAGCGTCAAAAAGTAGAGTT+AGG | + | chr4.4:33062253-33062272 | None:intergenic | 35.0% | |
| AAGTGATCTTACGATAACGT+AGG | + | chr4.4:33059949-33059968 | None:intergenic | 35.0% | |
| AAGTTACACTTACATGTTGC+AGG | - | chr4.4:33059376-33059395 | MS.gene006545:intron | 35.0% | |
| AGAAAATGGAACAACTGCTA+CGG | - | chr4.4:33060250-33060269 | MS.gene006545:intron | 35.0% | |
| ATTGCTTACCATGCAAAAGT+TGG | + | chr4.4:33061845-33061864 | None:intergenic | 35.0% | |
| CAATGACTCATTGAAAGACT+TGG | - | chr4.4:33059176-33059195 | MS.gene006545:intron | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | - | chr4.4:33060717-33060736 | MS.gene006545:CDS | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | + | chr4.4:33060736-33060717 | None:intergenic | 35.0% | |
| GAAAAGAGAATCAGTTCTGT+AGG | - | chr4.4:33059559-33059578 | MS.gene006545:intron | 35.0% | |
| GATTAAGTATTCCAGCCTTA+CGG | - | chr4.4:33059806-33059825 | MS.gene006545:intron | 35.0% | |
| GCAAAAGGCTCCTATATTTA+GGG | + | chr4.4:33060392-33060411 | None:intergenic | 35.0% | |
| GGATTTCTCTATTACATTCC+TGG | - | chr4.4:33058179-33058198 | MS.gene006545:intron | 35.0% | |
| GTGTTCCTTTGCACTTAATA+AGG | - | chr4.4:33059876-33059895 | MS.gene006545:intron | 35.0% | |
| TAAGATGATCTTTGTTCACG+AGG | - | chr4.4:33062348-33062367 | MS.gene006545:CDS | 35.0% | |
| TAGTCATCATGTGTGTTATG+TGG | - | chr4.4:33058040-33058059 | MS.gene006545:CDS | 35.0% | |
| TATCATGCATTTAACAGCAG+AGG | - | chr4.4:33057946-33057965 | MS.gene006545:CDS | 35.0% | |
| TATGTACATGTGCTTCTTTC+TGG | - | chr4.4:33058935-33058954 | MS.gene006545:intron | 35.0% | |
| TCATACAACGTAAGCATACT+GGG | + | chr4.4:33059223-33059242 | None:intergenic | 35.0% | |
| TCTAATAATGCTGAGCTTGA+TGG | - | chr4.4:33062575-33062594 | MS.gene006545:CDS | 35.0% | |
| TGACCATTTACAACTGTTTC+CGG | + | chr4.4:33062427-33062446 | None:intergenic | 35.0% | |
| TGAGATGTAAGGGAATTGTT+TGG | - | chr4.4:33059747-33059766 | MS.gene006545:intron | 35.0% | |
| TGCAAAAGGCTCCTATATTT+AGG | + | chr4.4:33060393-33060412 | None:intergenic | 35.0% | |
| TGTTAATCAAGGCTTTGCAT+TGG | - | chr4.4:33058220-33058239 | MS.gene006545:intron | 35.0% | |
| TTCATACAACGTAAGCATAC+TGG | + | chr4.4:33059224-33059243 | None:intergenic | 35.0% | |
| TTTCTCAAGTTTACCCTTGT+TGG | + | chr4.4:33060640-33060659 | None:intergenic | 35.0% | |
| ! | AAGGGTCTTATAATTAGGGA+CGG | - | chr4.4:33060920-33060939 | MS.gene006545:intron | 35.0% |
| ! | ACAAAGTGCAATAGTTTGTC+AGG | + | chr4.4:33061016-33061035 | None:intergenic | 35.0% |
| ! | ACTTTTTGACGCTTTGTCAT+GGG | - | chr4.4:33062259-33062278 | MS.gene006545:CDS | 35.0% |
| ! | ATGTCACTGACTATTTGAGA+AGG | + | chr4.4:33058452-33058471 | None:intergenic | 35.0% |
| ! | CAGTTGTTCCATTTTCTGAT+GGG | + | chr4.4:33060247-33060266 | None:intergenic | 35.0% |
| ! | CCCTTACAAGTCAATTTTGT+AGG | - | chr4.4:33061284-33061303 | MS.gene006545:intron | 35.0% |
| ! | GAGTGATTCTATCTAGAATG+AGG | - | chr4.4:33062091-33062110 | MS.gene006545:intron | 35.0% |
| ! | GGAGCCTTTTGCAAAAATTA+CGG | - | chr4.4:33060400-33060419 | MS.gene006545:CDS | 35.0% |
| ! | GTTTATGGTGTTTTCCAACA+AGG | - | chr4.4:33060623-33060642 | MS.gene006545:intron | 35.0% |
| ! | TAACATGATTTCTGGAAGGA+TGG | - | chr4.4:33058498-33058517 | MS.gene006545:intron | 35.0% |
| ! | TCTCTAACATGATTTCTGGA+AGG | - | chr4.4:33058494-33058513 | MS.gene006545:intron | 35.0% |
| ! | TGGCTTGTGATAATTTGAGT+CGG | - | chr4.4:33061750-33061769 | MS.gene006545:CDS | 35.0% |
| ! | TGTCACTGACTATTTGAGAA+GGG | + | chr4.4:33058451-33058470 | None:intergenic | 35.0% |
| ! | TTAATCTGGAATATCACCCA+GGG | - | chr4.4:33061604-33061623 | MS.gene006545:intron | 35.0% |
| ! | TTTAATCTGGAATATCACCC+AGG | - | chr4.4:33061603-33061622 | MS.gene006545:intron | 35.0% |
| !! | CAAAATTGACTTGTAAGGGA+AGG | + | chr4.4:33061283-33061302 | None:intergenic | 35.0% |
| !! | CGTTTTACTTGGAACTTGTT+AGG | - | chr4.4:33058895-33058914 | MS.gene006545:CDS | 35.0% |
| !! | GAAAAAGTATTCATAAGCCG+TGG | - | chr4.4:33061444-33061463 | MS.gene006545:intron | 35.0% |
| !! | TACTTTTTGACGCTTTGTCA+TGG | - | chr4.4:33062258-33062277 | MS.gene006545:CDS | 35.0% |
| !! | TAGCCTAATGATTCTAGGAT+AGG | + | chr4.4:33061336-33061355 | None:intergenic | 35.0% |
| AAAATGGAACAACTGCTACG+GGG | - | chr4.4:33060252-33060271 | MS.gene006545:intron | 40.0% | |
| AACTTGAGAGAACACAGACA+CGG | + | chr4.4:33058286-33058305 | None:intergenic | 40.0% | |
| AAGGCTCCTATATTTAGGGA+CGG | + | chr4.4:33060388-33060407 | None:intergenic | 40.0% | |
| ACATGTTGCAGGTAAGTTCA+TGG | - | chr4.4:33059387-33059406 | MS.gene006545:intron | 40.0% | |
| ACCATGCAAAAGTTGGAGAA+GGG | + | chr4.4:33061838-33061857 | None:intergenic | 40.0% | |
| ACCATTTACAACTGTTTCCG+GGG | + | chr4.4:33062425-33062444 | None:intergenic | 40.0% | |
| ACTAACCTCGAAAGAGAACA+GGG | - | chr4.4:33061684-33061703 | MS.gene006545:intron | 40.0% | |
| ACTCACGAATTAAGCTCTTC+AGG | + | chr4.4:33060004-33060023 | None:intergenic | 40.0% | |
| ACTGCAAAGAAGCTTCTATG+CGG | - | chr4.4:33060143-33060162 | MS.gene006545:intron | 40.0% | |
| AGCAACTTCCAAGATCAGTT+TGG | - | chr4.4:33057996-33058015 | MS.gene006545:CDS | 40.0% | |
| AGCTCACATTACTTATGGAG+AGG | - | chr4.4:33062712-33062731 | MS.gene006545:CDS | 40.0% | |
| AGCTCCCTTATTAAGTGCAA+AGG | + | chr4.4:33059884-33059903 | None:intergenic | 40.0% | |
| AGGGAATAATACTCAGACAC+AGG | + | chr4.4:33058982-33059001 | None:intergenic | 40.0% | |
| AGGTAAAGACAAAAGCCGTA+AGG | + | chr4.4:33059824-33059843 | None:intergenic | 40.0% | |
| CATGCAGCTCACATTACTTA+TGG | - | chr4.4:33062707-33062726 | MS.gene006545:CDS | 40.0% | |
| CTATGTCAGTGACATGCTTA+TGG | - | chr4.4:33058842-33058861 | MS.gene006545:CDS | 40.0% | |
| CTCACGAATTAAGCTCTTCA+GGG | + | chr4.4:33060003-33060022 | None:intergenic | 40.0% | |
| GAAAATGGAACAACTGCTAC+GGG | - | chr4.4:33060251-33060270 | MS.gene006545:intron | 40.0% | |
| GAAACAAAGTTTAATCCCCC+CGG | - | chr4.4:33062405-33062424 | MS.gene006545:CDS | 40.0% | |
| GACCATTTACAACTGTTTCC+GGG | + | chr4.4:33062426-33062445 | None:intergenic | 40.0% | |
| GAGCCTATCCTAGAATCATT+AGG | - | chr4.4:33061330-33061349 | MS.gene006545:intron | 40.0% | |
| GCTCACATTACTTATGGAGA+GGG | - | chr4.4:33062713-33062732 | MS.gene006545:CDS | 40.0% | |
| GGAATGATACCCTTGAAGAT+AGG | - | chr4.4:33059537-33059556 | MS.gene006545:intron | 40.0% | |
| GGGCTACTAGCAAAAAATTC+AGG | + | chr4.4:33059203-33059222 | None:intergenic | 40.0% | |
| GGTTGCATTTAAAAAGCCAG+TGG | - | chr4.4:33059408-33059427 | MS.gene006545:intron | 40.0% | |
| GTTGCTAAATAGACCATTGC+CGG | + | chr4.4:33057982-33058001 | None:intergenic | 40.0% | |
| TAAAATAGCAGGCCACTGTT+TGG | + | chr4.4:33061056-33061075 | None:intergenic | 40.0% | |
| TACCATGCAAAAGTTGGAGA+AGG | + | chr4.4:33061839-33061858 | None:intergenic | 40.0% | |
| TACGGCACTCTTGTTAATCA+AGG | - | chr4.4:33058209-33058228 | MS.gene006545:intron | 40.0% | |
| TACTAACCTCGAAAGAGAAC+AGG | - | chr4.4:33061683-33061702 | MS.gene006545:intron | 40.0% | |
| TCACGAATTAAGCTCTTCAG+GGG | + | chr4.4:33060002-33060021 | None:intergenic | 40.0% | |
| TCCAAGTAAAACGTGAAGAC+TGG | + | chr4.4:33058888-33058907 | None:intergenic | 40.0% | |
| TGAACCACTGATCTTTGAAC+CGG | + | chr4.4:33062551-33062570 | None:intergenic | 40.0% | |
| ! | AATCAAGGCTTTGCATTGGT+TGG | - | chr4.4:33058224-33058243 | MS.gene006545:intron | 40.0% |
| ! | ACCAGTCTTCACGTTTTACT+TGG | - | chr4.4:33058884-33058903 | MS.gene006545:CDS | 40.0% |
| ! | AGCTCTTGGCACAAGTTTTA+AGG | - | chr4.4:33060499-33060518 | MS.gene006545:CDS | 40.0% |
| ! | GATTAGTCCTGCTGTACTAA+GGG | + | chr4.4:33059284-33059303 | None:intergenic | 40.0% |
| ! | GCAGTTGTTCCATTTTCTGA+TGG | + | chr4.4:33060248-33060267 | None:intergenic | 40.0% |
| ! | GTCACTGACTATTTGAGAAG+GGG | + | chr4.4:33058450-33058469 | None:intergenic | 40.0% |
| ! | GTCTGATTTGATGCTTTCTG+TGG | - | chr4.4:33058643-33058662 | MS.gene006545:intron | 40.0% |
| ! | TAACGGGAACTTTTTGCAAG+TGG | + | chr4.4:33061130-33061149 | None:intergenic | 40.0% |
| ! | TGATTAGTCCTGCTGTACTA+AGG | + | chr4.4:33059285-33059304 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | + | chr4.4:33058007-33058026 | None:intergenic | 40.0% |
| !! | TTTGGTGCTTCTTCTCAACA+TGG | - | chr4.4:33058014-33058033 | MS.gene006545:CDS | 40.0% |
| AAAGACAAAAGCCGTAAGGC+TGG | + | chr4.4:33059820-33059839 | None:intergenic | 45.0% | |
| AAAGCAGACGTATCAAAGCC+AGG | + | chr4.4:33059652-33059671 | None:intergenic | 45.0% | |
| AAATGGAACAACTGCTACGG+GGG | - | chr4.4:33060253-33060272 | MS.gene006545:intron | 45.0% | |
| AACCACTGATCTTTGAACCG+GGG | + | chr4.4:33062549-33062568 | None:intergenic | 45.0% | |
| AAGCGCCATCAAGAAGAAGA+AGG | + | chr4.4:33058332-33058351 | None:intergenic | 45.0% | |
| ACACTCAAGATGTCCAGTCT+TGG | - | chr4.4:33061374-33061393 | MS.gene006545:intron | 45.0% | |
| ACATCTCTAACCTTACGAGC+TGG | - | chr4.4:33061467-33061486 | MS.gene006545:intron | 45.0% | |
| ACGGGTAGCCTAATGATTCT+AGG | + | chr4.4:33061341-33061360 | None:intergenic | 45.0% | |
| AGACCATTGCCGGATAAAAC+TGG | + | chr4.4:33057972-33057991 | None:intergenic | 45.0% | |
| AGAGGCTTAATGAGCAAGCA+TGG | - | chr4.4:33058112-33058131 | MS.gene006545:CDS | 45.0% | |
| ATCAAGTGCCACATTGCTCA+GGG | - | chr4.4:33059093-33059112 | MS.gene006545:intron | 45.0% | |
| ATGCATTCATTGGTCCACCA+GGG | + | chr4.4:33062643-33062662 | None:intergenic | 45.0% | |
| ATGTCCAGTCTTGGTTGTGA+TGG | - | chr4.4:33061383-33061402 | MS.gene006545:intron | 45.0% | |
| ATGTTCATTGCCTCCGATCA+TGG | - | chr4.4:33060177-33060196 | MS.gene006545:intron | 45.0% | |
| CAAAAGCAGTTTGTGATCCC+TGG | - | chr4.4:33062623-33062642 | MS.gene006545:CDS | 45.0% | |
| CATTTACAACTGTTTCCGGG+GGG | + | chr4.4:33062423-33062442 | None:intergenic | 45.0% | |
| CCATTTACAACTGTTTCCGG+GGG | + | chr4.4:33062424-33062443 | None:intergenic | 45.0% | |
| CGTAAGGTTAGAGATGTCCA+CGG | + | chr4.4:33061464-33061483 | None:intergenic | 45.0% | |
| CTAACCTCGAAAGAGAACAG+GGG | - | chr4.4:33061685-33061704 | MS.gene006545:intron | 45.0% | |
| CTACCTCCGTCCCTAAATAT+AGG | - | chr4.4:33060379-33060398 | MS.gene006545:CDS | 45.0% | |
| CTCATTAAGCCTCTCAACCT+CGG | + | chr4.4:33058106-33058125 | None:intergenic | 45.0% | |
| CTCCTCAAGCAGTAATCAGA+AGG | + | chr4.4:33062064-33062083 | None:intergenic | 45.0% | |
| CTCTATTACATTCCTGGCCA+TGG | - | chr4.4:33058185-33058204 | MS.gene006545:intron | 45.0% | |
| CTGGTTGTCCCATCAGAAAA+TGG | - | chr4.4:33060236-33060255 | MS.gene006545:intron | 45.0% | |
| CTTCTGATTACTGCTTGAGG+AGG | - | chr4.4:33062062-33062081 | MS.gene006545:intron | 45.0% | |
| GAACCACTGATCTTTGAACC+GGG | + | chr4.4:33062550-33062569 | None:intergenic | 45.0% | |
| GCATTTACTAGCAAGCAAGC+AGG | - | chr4.4:33058371-33058390 | MS.gene006545:intron | 45.0% | |
| GCTTAATGAGCAAGCATGGA+GGG | - | chr4.4:33058116-33058135 | MS.gene006545:intron | 45.0% | |
| GGAACATAGAAGCTTTGCAC+TGG | + | chr4.4:33062674-33062693 | None:intergenic | 45.0% | |
| GGAGAAGAGGATGCATTCAT+TGG | + | chr4.4:33062653-33062672 | None:intergenic | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | - | chr4.4:33059897-33059916 | MS.gene006545:intron | 45.0% | |
| GGGTTCCTTCTTCTTCTTGA+TGG | - | chr4.4:33058324-33058343 | MS.gene006545:intron | 45.0% | |
| GTCAGTGACATGCTTATGGA+GGG | - | chr4.4:33058846-33058865 | MS.gene006545:CDS | 45.0% | |
| GTCCTTCTGATTACTGCTTG+AGG | - | chr4.4:33062059-33062078 | MS.gene006545:intron | 45.0% | |
| TACATTCCTGGCCATGGTTA+CGG | - | chr4.4:33058191-33058210 | MS.gene006545:intron | 45.0% | |
| TCAGTGACATGCTTATGGAG+GGG | - | chr4.4:33058847-33058866 | MS.gene006545:CDS | 45.0% | |
| TGAAGTTCCCTTAGTACAGC+AGG | - | chr4.4:33059274-33059293 | MS.gene006545:intron | 45.0% | |
| TGAGCTGCATGTGTTTGAGA+TGG | + | chr4.4:33062698-33062717 | None:intergenic | 45.0% | |
| TGTCAGTGACATGCTTATGG+AGG | - | chr4.4:33058845-33058864 | MS.gene006545:CDS | 45.0% | |
| TGTCCAGTCTTGGTTGTGAT+GGG | - | chr4.4:33061384-33061403 | MS.gene006545:intron | 45.0% | |
| ! | AAGCCAGTGGCATGCTTTTA+TGG | - | chr4.4:33059421-33059440 | MS.gene006545:intron | 45.0% |
| ! | ACCCTTCTCCAACTTTTGCA+TGG | - | chr4.4:33061834-33061853 | MS.gene006545:CDS | 45.0% |
| ! | AGCCAGTGGCATGCTTTTAT+GGG | - | chr4.4:33059422-33059441 | MS.gene006545:intron | 45.0% |
| ! | GGTCTTATAATTAGGGACGG+AGG | - | chr4.4:33060923-33060942 | MS.gene006545:intron | 45.0% |
| ! | TGGAAAAGGTGGGTTCAAAG+TGG | - | chr4.4:33061941-33061960 | MS.gene006545:intron | 45.0% |
| !! | TAACAAGAGTGCCGTAACCA+TGG | + | chr4.4:33058205-33058224 | None:intergenic | 45.0% |
| !! | TAATCAAGCCTTGTTCTCGC+TGG | + | chr4.4:33061630-33061649 | None:intergenic | 45.0% |
| !! | TTTTGTTTGAGCTCCCAGCT+GGG | + | chr4.4:33062741-33062760 | None:intergenic | 45.0% |
| !!! | AACCTTACGAGCTGGTTTTG+TGG | - | chr4.4:33061475-33061494 | MS.gene006545:intron | 45.0% |
| !! | TTATGAATAAAAAAAATTAA+CGG | + | chr4.4:33061147-33061166 | None:intergenic | 5.0% |
| AAGCAGTTTGTGATCCCTGG+TGG | - | chr4.4:33062626-33062645 | MS.gene006545:CDS | 50.0% | |
| AATGGAACAACTGCTACGGG+GGG | - | chr4.4:33060254-33060273 | MS.gene006545:intron | 50.0% | |
| ACATGCTTATGGAGGGGCAA+TGG | - | chr4.4:33058853-33058872 | MS.gene006545:CDS | 50.0% | |
| ACCACTGATCTTTGAACCGG+GGG | + | chr4.4:33062548-33062567 | None:intergenic | 50.0% | |
| ACTAGCAAGCAAGCAGGCTT+CGG | - | chr4.4:33058377-33058396 | MS.gene006545:intron | 50.0% | |
| AGCTCAGCTCAAACTGAGGT+TGG | - | chr4.4:33061719-33061738 | MS.gene006545:CDS | 50.0% | |
| AGTGTGAGCCAAGTGACTAC+GGG | + | chr4.4:33061359-33061378 | None:intergenic | 50.0% | |
| ATGCGGTTGCAGACATATGC+GGG | - | chr4.4:33057892-33057911 | MS.gene006545:CDS | 50.0% | |
| CAGTCAGATGCTCATCGACA+AGG | - | chr4.4:33060290-33060309 | MS.gene006545:intron | 50.0% | |
| CATGCTTATGGAGGGGCAAT+GGG | - | chr4.4:33058854-33058873 | MS.gene006545:CDS | 50.0% | |
| CCCCCGGAAACAGTTGTAAA+TGG | - | chr4.4:33062421-33062440 | MS.gene006545:CDS | 50.0% | |
| CTCAAACTGAGGTTGGCGAT+GGG | - | chr4.4:33061726-33061745 | MS.gene006545:CDS | 50.0% | |
| CTCCACAAAACCAGCTCGTA+AGG | + | chr4.4:33061480-33061499 | None:intergenic | 50.0% | |
| CTCTTCACGACAGATGATGC+AGG | + | chr4.4:33060117-33060136 | None:intergenic | 50.0% | |
| GAAGCTTTGCACTGGAGAAG+AGG | + | chr4.4:33062666-33062685 | None:intergenic | 50.0% | |
| GAGTGTGAGCCAAGTGACTA+CGG | + | chr4.4:33061360-33061379 | None:intergenic | 50.0% | |
| GATCAAGTGCCACATTGCTC+AGG | - | chr4.4:33059092-33059111 | MS.gene006545:intron | 50.0% | |
| GATGCATTCATTGGTCCACC+AGG | + | chr4.4:33062644-33062663 | None:intergenic | 50.0% | |
| GATGCGGTTGCAGACATATG+CGG | - | chr4.4:33057891-33057910 | MS.gene006545:CDS | 50.0% | |
| GCTCCTATATTTAGGGACGG+AGG | + | chr4.4:33060385-33060404 | None:intergenic | 50.0% | |
| GCTCTTTACCCTGAGCAATG+TGG | + | chr4.4:33059104-33059123 | None:intergenic | 50.0% | |
| GGCTTAATGAGCAAGCATGG+AGG | - | chr4.4:33058115-33058134 | MS.gene006545:intron | 50.0% | |
| GTCCAGTCTTGGTTGTGATG+GGG | - | chr4.4:33061385-33061404 | MS.gene006545:intron | 50.0% | |
| TAATGAGCAAGCATGGAGGG+AGG | - | chr4.4:33058119-33058138 | MS.gene006545:intron | 50.0% | |
| TAGCAGGCCACTGTTTGGAA+AGG | + | chr4.4:33061051-33061070 | None:intergenic | 50.0% | |
| TCAAACTGAGGTTGGCGATG+GGG | - | chr4.4:33061727-33061746 | MS.gene006545:CDS | 50.0% | |
| TCTCAAACTTACAGCTCCCC+TGG | - | chr4.4:33062509-33062528 | MS.gene006545:CDS | 50.0% | |
| TGAGAGAACACAGACACGGA+AGG | + | chr4.4:33058282-33058301 | None:intergenic | 50.0% | |
| TGGAAGCTCAGCTCAAACTG+AGG | - | chr4.4:33061715-33061734 | MS.gene006545:CDS | 50.0% | |
| TGGCTACACTCTTTATCCCC+CGG | - | chr4.4:33062529-33062548 | MS.gene006545:CDS | 50.0% | |
| TGTCGATGAGCATCTGACTG+TGG | + | chr4.4:33060290-33060309 | None:intergenic | 50.0% | |
| TTAGGCTACCCGTAGTCACT+TGG | - | chr4.4:33061348-33061367 | MS.gene006545:intron | 50.0% | |
| ! | CACCCATAAAAGCATGCCAC+TGG | + | chr4.4:33059427-33059446 | None:intergenic | 50.0% |
| ! | CAGTGGCATGCTTTTATGGG+TGG | - | chr4.4:33059425-33059444 | MS.gene006545:intron | 50.0% |
| ! | GCTGCATGTGTTTGAGATGG+TGG | + | chr4.4:33062695-33062714 | None:intergenic | 50.0% |
| ! | GGGATAAAGAGTGTAGCCAG+GGG | + | chr4.4:33062528-33062547 | None:intergenic | 50.0% |
| ! | GGGGATAAAGAGTGTAGCCA+GGG | + | chr4.4:33062529-33062548 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | - | chr4.4:33057966-33057985 | MS.gene006545:CDS | 50.0% |
| !! | CAGCAGAGGCCAGTTTTATC+CGG | - | chr4.4:33057960-33057979 | MS.gene006545:CDS | 50.0% |
| !! | CTGCTTTTGTGCTTGCTCAC+TGG | + | chr4.4:33062612-33062631 | None:intergenic | 50.0% |
| !!! | GTTTTGTTTGAGCTCCCAGC+TGG | + | chr4.4:33062742-33062761 | None:intergenic | 50.0% |
| ACAACCAGTGCTCTGCAGGT+AGG | + | chr4.4:33060224-33060243 | None:intergenic | 55.0% | |
| AGCTCTTCAGGGGTTGCATC+TGG | + | chr4.4:33059992-33060011 | None:intergenic | 55.0% | |
| CAACCAGTGCTCTGCAGGTA+GGG | + | chr4.4:33060223-33060242 | None:intergenic | 55.0% | |
| CACCCCATCACAACCAAGAC+TGG | + | chr4.4:33061390-33061409 | None:intergenic | 55.0% | |
| CCTCGAAAGAGAACAGGGGA+AGG | - | chr4.4:33061689-33061708 | MS.gene006545:CDS | 55.0% | |
| CCTTCCCCTGTTCTCTTTCG+AGG | + | chr4.4:33061692-33061711 | None:intergenic | 55.0% | |
| CGGTGCACCTTTCCAAACAG+TGG | - | chr4.4:33061041-33061060 | MS.gene006545:intron | 55.0% | |
| GCAAGCATGGAGGGAGGTTA+TGG | - | chr4.4:33058125-33058144 | MS.gene006545:intron | 55.0% | |
| GCTCAAACTGAGGTTGGCGA+TGG | - | chr4.4:33061725-33061744 | MS.gene006545:CDS | 55.0% | |
| TATGGAGAGGGATCCCAGCT+GGG | - | chr4.4:33062725-33062744 | MS.gene006545:CDS | 55.0% | |
| TCCCCCGGTTCAAAGATCAG+TGG | - | chr4.4:33062544-33062563 | MS.gene006545:CDS | 55.0% | |
| TGGTTCTCTTCGAGAAGCCG+AGG | - | chr4.4:33058086-33058105 | MS.gene006545:CDS | 55.0% | |
| TTATGGAGAGGGATCCCAGC+TGG | - | chr4.4:33062724-33062743 | MS.gene006545:CDS | 55.0% | |
| TTCGAGAAGCCGAGGTTGAG+AGG | - | chr4.4:33058094-33058113 | MS.gene006545:CDS | 55.0% | |
| ! | AAGAGAACAGGGGAAGGCAC+TGG | - | chr4.4:33061695-33061714 | MS.gene006545:CDS | 55.0% |
| ! | GGGGGATAAAGAGTGTAGCC+AGG | + | chr4.4:33062530-33062549 | None:intergenic | 55.0% |
| !! | CAGGGTAAAGAGCACTCTGG+AGG | - | chr4.4:33059111-33059130 | MS.gene006545:intron | 55.0% |
| !! | GCTCAGGGTAAAGAGCACTC+TGG | - | chr4.4:33059108-33059127 | MS.gene006545:intron | 55.0% |
| AACTGAGGTTGGCGATGGGG+TGG | - | chr4.4:33061730-33061749 | MS.gene006545:CDS | 60.0% | |
| GCCTCCGATCATGGCTAGAG+CGG | - | chr4.4:33060186-33060205 | MS.gene006545:intron | 60.0% | |
| GCTGCCGCTCTAGCCATGAT+CGG | + | chr4.4:33060193-33060212 | None:intergenic | 60.0% | |
| TGGGACAACCAGTGCTCTGC+AGG | + | chr4.4:33060228-33060247 | None:intergenic | 60.0% | |
| TTGCCCTACCTGCAGAGCAC+TGG | - | chr4.4:33060217-33060236 | MS.gene006545:intron | 60.0% | |
| !! | AGAGTGCCGTAACCATGGCC+AGG | + | chr4.4:33058200-33058219 | None:intergenic | 60.0% |
| ACCCAGGGCCAGCGAGAACA+AGG | - | chr4.4:33061619-33061638 | MS.gene006545:intron | 65.0% | |
| GCCGCTCTAGCCATGATCGG+AGG | + | chr4.4:33060190-33060209 | None:intergenic | 65.0% | |
| ! | GCCTTGTTCTCGCTGGCCCT+GGG | + | chr4.4:33061623-33061642 | None:intergenic | 65.0% |
| !! | AGCCTTGTTCTCGCTGGCCC+TGG | + | chr4.4:33061624-33061643 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 33057883 | 33062772 | 33057883 | ID=MS.gene006545 |
| chr4.4 | mRNA | 33057883 | 33062772 | 33057883 | ID=MS.gene006545.t1;Parent=MS.gene006545 |
| chr4.4 | exon | 33062234 | 33062772 | 33062234 | ID=MS.gene006545.t1.exon1;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33062234 | 33062772 | 33062234 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| chr4.4 | exon | 33061688 | 33061864 | 33061688 | ID=MS.gene006545.t1.exon2;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33061688 | 33061864 | 33061688 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| chr4.4 | exon | 33060638 | 33060787 | 33060638 | ID=MS.gene006545.t1.exon3;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33060638 | 33060787 | 33060638 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| chr4.4 | exon | 33060344 | 33060552 | 33060344 | ID=MS.gene006545.t1.exon4;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33060344 | 33060552 | 33060344 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| chr4.4 | exon | 33058800 | 33058950 | 33058800 | ID=MS.gene006545.t1.exon5;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33058800 | 33058950 | 33058800 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| chr4.4 | exon | 33057883 | 33058132 | 33057883 | ID=MS.gene006545.t1.exon6;Parent=MS.gene006545.t1 |
| chr4.4 | CDS | 33057883 | 33058132 | 33057883 | ID=cds.MS.gene006545.t1;Parent=MS.gene006545.t1 |
| Gene Sequence |
| Protein sequence |
