Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31164.t1 | XP_013465378.1 | 100 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 2.70E-92 | 347.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31164.t1 | Q42540 | 92.7 | 165 | 12 | 0 | 1 | 165 | 1 | 165 | 7.1e-89 | 327.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31164.t1 | A0A072VDB4 | 100.0 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 2.0e-92 | 347.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene31164 | -0.827235 | 1.75E-54 | -1.69E-46 |
| MS.gene049265 | MS.gene31164 | 0.801207 | 1.00E-48 | -1.69E-46 |
| MS.gene049488 | MS.gene31164 | -0.819197 | 1.32E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene31164 | 0.822238 | 2.64E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene31164 | -0.80498 | 1.66E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene31164 | -0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene31164 | -0.800896 | 1.16E-48 | -1.69E-46 |
| MS.gene050971 | MS.gene31164 | -0.802016 | 6.85E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene31164 | -0.823999 | 1.02E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene31164 | -0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene051552 | MS.gene31164 | 0.816758 | 4.69E-52 | -1.69E-46 |
| MS.gene052128 | MS.gene31164 | 0.942639 | 5.03E-102 | -1.69E-46 |
| MS.gene052346 | MS.gene31164 | -0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene052501 | MS.gene31164 | -0.82451 | 7.76E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene31164 | -0.826051 | 3.35E-54 | -1.69E-46 |
| MS.gene053873 | MS.gene31164 | -0.81304 | 3.13E-51 | -1.69E-46 |
| MS.gene054107 | MS.gene31164 | -0.800443 | 1.44E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene31164 | 0.831133 | 1.98E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene31164 | -0.804305 | 2.30E-49 | -1.69E-46 |
| MS.gene055536 | MS.gene31164 | 0.801851 | 7.41E-49 | -1.69E-46 |
| MS.gene056095 | MS.gene31164 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene31164 | -0.808626 | 2.82E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene31164 | -0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene31164 | -0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene31164 | -0.828762 | 7.51E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene31164 | -0.810736 | 9.94E-51 | -1.69E-46 |
| MS.gene059512 | MS.gene31164 | -0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene31164 | -0.810232 | 1.28E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene66898 | PPI |
| MS.gene31164 | MS.gene98656 | PPI |
| MS.gene31164 | MS.gene92627 | PPI |
| MS.gene31164 | MS.gene21866 | PPI |
| MS.gene31164 | MS.gene05127 | PPI |
| MS.gene31164 | MS.gene024777 | PPI |
| MS.gene31164 | MS.gene006545 | PPI |
| MS.gene31164 | MS.gene58463 | PPI |
| MS.gene31164 | MS.gene21760 | PPI |
| MS.gene75306 | MS.gene31164 | PPI |
| MS.gene031760 | MS.gene31164 | PPI |
| MS.gene058107 | MS.gene31164 | PPI |
| MS.gene31164 | MS.gene014659 | PPI |
| MS.gene31164 | MS.gene009653 | PPI |
| MS.gene31164 | MS.gene53889 | PPI |
| MS.gene31164 | MS.gene049594 | PPI |
| MS.gene051019 | MS.gene31164 | PPI |
| MS.gene31164 | MS.gene84510 | PPI |
| MS.gene31164 | MS.gene58462 | PPI |
| MS.gene31164 | MS.gene81045 | PPI |
| MS.gene31164 | MS.gene98045 | PPI |
| MS.gene31164 | MS.gene017247 | PPI |
| MS.gene40316 | MS.gene31164 | PPI |
| MS.gene31164 | MS.gene08461 | PPI |
| MS.gene31164 | MS.gene67704 | PPI |
| MS.gene033148 | MS.gene31164 | PPI |
| MS.gene31164 | MS.gene065876 | PPI |
| MS.gene038898 | MS.gene31164 | PPI |
| MS.gene31164 | MS.gene25036 | PPI |
| MS.gene31164 | MS.gene64374 | PPI |
| MS.gene31164 | MS.gene26246 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31164.t1 | MTR_2g096690 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 4.24e-124 | 346 |
| MS.gene31164.t1 | MTR_2g096690 | 99.398 | 166 | 0 | 1 | 1 | 166 | 1 | 165 | 2.13e-121 | 339 |
| MS.gene31164.t1 | MTR_4g063490 | 93.373 | 166 | 11 | 0 | 1 | 166 | 1 | 166 | 3.55e-107 | 303 |
| MS.gene31164.t1 | MTR_2g096690 | 99.138 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 1.29e-84 | 244 |
| MS.gene31164.t1 | MTR_8g468530 | 35.802 | 162 | 90 | 2 | 1 | 162 | 17 | 164 | 2.14e-33 | 116 |
| MS.gene31164.t1 | MTR_4g108080 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 6.50e-33 | 114 |
| MS.gene31164.t1 | MTR_7g116940 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 2.21e-30 | 108 |
| MS.gene31164.t1 | MTR_3g062450 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 7.46e-29 | 104 |
| MS.gene31164.t1 | MTR_5g075580 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.68e-29 | 103 |
| MS.gene31164.t1 | MTR_1g021150 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 3.58e-28 | 102 |
| MS.gene31164.t1 | MTR_4g073240 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 4.26e-28 | 102 |
| MS.gene31164.t1 | MTR_7g116940 | 34.756 | 164 | 86 | 3 | 5 | 161 | 2 | 151 | 2.29e-27 | 100 |
| MS.gene31164.t1 | MTR_8g071040 | 33.758 | 157 | 90 | 2 | 5 | 161 | 2 | 144 | 3.29e-27 | 100 |
| MS.gene31164.t1 | MTR_4g076200 | 36.184 | 152 | 82 | 3 | 9 | 160 | 37 | 173 | 6.15e-26 | 97.8 |
| MS.gene31164.t1 | MTR_4g108080 | 34.307 | 137 | 69 | 2 | 34 | 162 | 25 | 148 | 1.26e-25 | 96.3 |
| MS.gene31164.t1 | MTR_4g076200 | 36.641 | 131 | 69 | 2 | 30 | 160 | 16 | 132 | 6.20e-25 | 94.0 |
| MS.gene31164.t1 | MTR_1g095510 | 36.774 | 155 | 84 | 2 | 3 | 157 | 40 | 180 | 1.33e-24 | 94.7 |
| MS.gene31164.t1 | MTR_5g009020 | 34.868 | 152 | 84 | 3 | 9 | 160 | 37 | 173 | 8.89e-24 | 92.0 |
| MS.gene31164.t1 | MTR_1g095510 | 39.062 | 128 | 64 | 2 | 30 | 157 | 13 | 126 | 3.01e-23 | 89.7 |
| MS.gene31164.t1 | MTR_5g075580 | 32.812 | 128 | 73 | 1 | 34 | 161 | 1 | 115 | 4.08e-23 | 88.6 |
| MS.gene31164.t1 | MTR_2g078010 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 4.74e-23 | 89.4 |
| MS.gene31164.t1 | MTR_7g116940 | 39.516 | 124 | 60 | 3 | 5 | 128 | 2 | 110 | 8.21e-23 | 88.2 |
| MS.gene31164.t1 | MTR_4g073240 | 33.594 | 128 | 72 | 1 | 34 | 161 | 1 | 115 | 8.32e-23 | 87.8 |
| MS.gene31164.t1 | MTR_2g078010 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 8.64e-23 | 89.0 |
| MS.gene31164.t1 | MTR_1g021150 | 33.088 | 136 | 77 | 2 | 26 | 161 | 31 | 152 | 8.92e-23 | 89.0 |
| MS.gene31164.t1 | MTR_4g108080 | 35.772 | 123 | 65 | 2 | 1 | 123 | 1 | 109 | 2.41e-22 | 86.7 |
| MS.gene31164.t1 | MTR_3g110110 | 33.613 | 119 | 65 | 2 | 28 | 145 | 28 | 133 | 8.43e-22 | 86.3 |
| MS.gene31164.t1 | MTR_5g016630 | 34.109 | 129 | 74 | 2 | 33 | 161 | 37 | 154 | 9.75e-21 | 83.6 |
| MS.gene31164.t1 | MTR_4g094872 | 32.075 | 159 | 93 | 2 | 1 | 155 | 1 | 148 | 1.29e-20 | 83.2 |
| MS.gene31164.t1 | MTR_8g085690 | 34.615 | 130 | 71 | 2 | 2 | 131 | 20 | 135 | 9.16e-20 | 81.3 |
| MS.gene31164.t1 | MTR_2g078010 | 30.201 | 149 | 76 | 3 | 11 | 145 | 12 | 146 | 7.95e-19 | 79.0 |
| MS.gene31164.t1 | MTR_3g098780 | 28.986 | 138 | 82 | 4 | 9 | 144 | 7 | 130 | 2.43e-18 | 78.2 |
| MS.gene31164.t1 | MTR_3g098780 | 28.986 | 138 | 82 | 4 | 9 | 144 | 31 | 154 | 3.59e-18 | 78.2 |
| MS.gene31164.t1 | MTR_2g078010 | 31.579 | 114 | 64 | 2 | 11 | 124 | 12 | 111 | 3.69e-16 | 70.5 |
| MS.gene31164.t1 | MTR_1g095510 | 34.400 | 125 | 69 | 1 | 3 | 127 | 40 | 151 | 4.01e-16 | 72.0 |
| MS.gene31164.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 15 | 121 | 2.38e-14 | 66.6 |
| MS.gene31164.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 63 | 169 | 4.29e-14 | 67.0 |
| MS.gene31164.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 66 | 172 | 4.77e-14 | 66.6 |
| MS.gene31164.t1 | MTR_8g076490 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.69e-12 | 62.0 |
| MS.gene31164.t1 | MTR_5g021260 | 32.143 | 112 | 60 | 3 | 9 | 119 | 20 | 116 | 8.97e-12 | 60.1 |
| MS.gene31164.t1 | MTR_7g087590 | 26.207 | 145 | 93 | 2 | 9 | 153 | 15 | 145 | 1.78e-11 | 60.8 |
| MS.gene31164.t1 | MTR_8g023380 | 29.412 | 136 | 66 | 6 | 1 | 127 | 1 | 115 | 4.87e-11 | 59.7 |
| MS.gene31164.t1 | MTR_4g121960 | 28.205 | 156 | 81 | 6 | 1 | 148 | 7 | 139 | 5.46e-11 | 60.1 |
| MS.gene31164.t1 | MTR_4g106690 | 24.051 | 158 | 103 | 5 | 10 | 164 | 6 | 149 | 8.53e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31164.t1 | AT5G59300 | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.15e-107 | 304 |
| MS.gene31164.t1 | AT3G46460 | 91.566 | 166 | 14 | 0 | 1 | 166 | 1 | 166 | 6.80e-106 | 300 |
| MS.gene31164.t1 | AT3G55380 | 87.805 | 164 | 20 | 0 | 3 | 166 | 4 | 167 | 3.14e-100 | 285 |
| MS.gene31164.t1 | AT3G55380 | 71.717 | 198 | 22 | 1 | 3 | 166 | 4 | 201 | 3.85e-92 | 266 |
| MS.gene31164.t1 | AT3G46460 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.89e-78 | 229 |
| MS.gene31164.t1 | AT3G46460 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.89e-78 | 229 |
| MS.gene31164.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene31164.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene31164.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene31164.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene31164.t1 | AT1G14400 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.51e-33 | 115 |
| MS.gene31164.t1 | AT1G14400 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.51e-33 | 115 |
| MS.gene31164.t1 | AT5G62540 | 36.420 | 162 | 89 | 2 | 1 | 162 | 1 | 148 | 1.32e-32 | 114 |
| MS.gene31164.t1 | AT3G08700 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 8.93e-30 | 106 |
| MS.gene31164.t1 | AT3G08700 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 8.93e-30 | 106 |
| MS.gene31164.t1 | AT3G08690 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.07e-30 | 106 |
| MS.gene31164.t1 | AT3G08690 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.07e-30 | 106 |
| MS.gene31164.t1 | AT1G64230 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.75e-29 | 105 |
| MS.gene31164.t1 | AT1G64230 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.75e-29 | 105 |
| MS.gene31164.t1 | AT4G27960 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 6.72e-29 | 104 |
| MS.gene31164.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene31164.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene31164.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene31164.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene31164.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene31164.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene31164.t1 | AT4G27960 | 34.161 | 161 | 92 | 2 | 1 | 161 | 28 | 174 | 5.17e-28 | 103 |
| MS.gene31164.t1 | AT5G56150 | 33.121 | 157 | 91 | 2 | 5 | 161 | 2 | 144 | 6.95e-27 | 99.4 |
| MS.gene31164.t1 | AT5G41700 | 34.177 | 158 | 89 | 3 | 5 | 161 | 2 | 145 | 2.75e-26 | 97.8 |
| MS.gene31164.t1 | AT1G64230 | 32.727 | 165 | 90 | 2 | 5 | 161 | 2 | 153 | 8.89e-26 | 96.7 |
| MS.gene31164.t1 | AT2G16740 | 31.210 | 157 | 94 | 2 | 5 | 161 | 2 | 144 | 5.35e-24 | 91.7 |
| MS.gene31164.t1 | AT1G64230 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.92e-23 | 91.7 |
| MS.gene31164.t1 | AT1G64230 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.92e-23 | 91.7 |
| MS.gene31164.t1 | AT1G50490 | 35.878 | 131 | 70 | 2 | 30 | 160 | 60 | 176 | 2.80e-23 | 90.9 |
| MS.gene31164.t1 | AT5G25760 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.88e-23 | 90.1 |
| MS.gene31164.t1 | AT5G25760 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.88e-23 | 90.1 |
| MS.gene31164.t1 | AT1G16890 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 3.91e-23 | 89.7 |
| MS.gene31164.t1 | AT1G78870 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 5.29e-23 | 89.4 |
| MS.gene31164.t1 | AT3G20060 | 34.211 | 152 | 85 | 3 | 9 | 160 | 41 | 177 | 8.35e-23 | 89.7 |
| MS.gene31164.t1 | AT3G20060 | 34.351 | 131 | 72 | 2 | 30 | 160 | 16 | 132 | 3.85e-22 | 86.7 |
| MS.gene31164.t1 | AT5G41700 | 37.607 | 117 | 59 | 2 | 5 | 121 | 2 | 104 | 2.25e-21 | 85.1 |
| MS.gene31164.t1 | AT1G16890 | 34.127 | 126 | 69 | 2 | 20 | 145 | 30 | 141 | 3.93e-21 | 84.7 |
| MS.gene31164.t1 | AT3G57870 | 34.437 | 151 | 84 | 2 | 9 | 155 | 10 | 149 | 6.26e-21 | 84.3 |
| MS.gene31164.t1 | AT1G36340 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.64e-21 | 84.0 |
| MS.gene31164.t1 | AT1G36340 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.64e-21 | 84.0 |
| MS.gene31164.t1 | AT5G53300 | 37.069 | 116 | 59 | 2 | 4 | 119 | 1 | 102 | 1.30e-20 | 82.0 |
| MS.gene31164.t1 | AT1G16890 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.72e-20 | 82.0 |
| MS.gene31164.t1 | AT1G78870 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.76e-20 | 82.0 |
| MS.gene31164.t1 | AT3G24515 | 32.143 | 168 | 97 | 3 | 2 | 161 | 4 | 162 | 3.55e-20 | 86.3 |
| MS.gene31164.t1 | AT5G56150 | 34.483 | 116 | 62 | 2 | 5 | 120 | 2 | 103 | 3.86e-20 | 80.9 |
| MS.gene31164.t1 | AT1G78870 | 33.636 | 110 | 59 | 2 | 37 | 145 | 4 | 100 | 1.07e-18 | 77.4 |
| MS.gene31164.t1 | AT3G24515 | 32.558 | 129 | 78 | 2 | 33 | 161 | 68 | 187 | 1.44e-17 | 79.0 |
| MS.gene31164.t1 | AT5G50870 | 29.710 | 138 | 81 | 4 | 9 | 144 | 7 | 130 | 2.16e-17 | 75.9 |
| MS.gene31164.t1 | AT5G50870 | 29.927 | 137 | 80 | 4 | 9 | 143 | 7 | 129 | 7.38e-17 | 74.7 |
| MS.gene31164.t1 | AT3G13550 | 31.544 | 149 | 85 | 3 | 9 | 154 | 41 | 175 | 1.10e-16 | 73.6 |
| MS.gene31164.t1 | AT1G78870 | 31.304 | 115 | 65 | 2 | 11 | 125 | 12 | 112 | 1.46e-16 | 71.6 |
| MS.gene31164.t1 | AT3G13550 | 32.787 | 122 | 68 | 2 | 9 | 130 | 41 | 148 | 1.95e-14 | 67.4 |
| MS.gene31164.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene31164.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene31164.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene31164.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene31164.t1 | AT2G18600 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.16e-14 | 67.0 |
| MS.gene31164.t1 | AT2G18600 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.16e-14 | 67.0 |
| MS.gene31164.t1 | AT4G36800 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.67e-14 | 66.6 |
| MS.gene31164.t1 | AT4G36800 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.67e-14 | 66.6 |
| MS.gene31164.t1 | AT1G45050 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 1.08e-12 | 62.8 |
| MS.gene31164.t1 | AT1G63800 | 25.974 | 154 | 98 | 4 | 10 | 161 | 6 | 145 | 1.63e-12 | 62.8 |
| MS.gene31164.t1 | AT1G75440 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.79e-12 | 62.0 |
| MS.gene31164.t1 | AT5G42990 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 2.07e-12 | 62.0 |
| MS.gene31164.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.66e-12 | 62.0 |
| MS.gene31164.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.66e-12 | 62.0 |
| MS.gene31164.t1 | AT2G46030 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.73e-12 | 62.0 |
| MS.gene31164.t1 | AT2G46030 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.73e-12 | 62.0 |
| MS.gene31164.t1 | AT1G63800 | 28.906 | 128 | 76 | 3 | 36 | 161 | 16 | 130 | 5.10e-12 | 61.2 |
| MS.gene31164.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 78 | 217 | 8.09e-12 | 62.0 |
| MS.gene31164.t1 | AT5G41340 | 28.906 | 128 | 76 | 3 | 36 | 161 | 31 | 145 | 9.00e-12 | 60.8 |
| MS.gene31164.t1 | AT3G17000 | 30.769 | 130 | 60 | 6 | 11 | 131 | 18 | 126 | 1.17e-11 | 62.0 |
| MS.gene31164.t1 | AT1G17280 | 29.861 | 144 | 78 | 6 | 1 | 137 | 1 | 128 | 2.37e-11 | 60.5 |
| MS.gene31164.t1 | AT1G45050 | 34.118 | 85 | 53 | 2 | 9 | 92 | 20 | 102 | 4.66e-11 | 57.4 |
| MS.gene31164.t1 | AT5G50430 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 6.87e-11 | 59.3 |
| MS.gene31164.t1 | AT5G50430 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 6.87e-11 | 59.3 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene31164.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
Find 44 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGGAGTGTAACCATAAT+TGG | 0.137403 | 2.4:+6730004 | MS.gene31164:CDS |
| AGTATCATATCGATGCTTTC+TGG | 0.256685 | 2.4:+6732683 | MS.gene31164:CDS |
| GAGAGACGATTTCAAGAAAA+AGG | 0.291595 | 2.4:+6734119 | MS.gene31164:CDS |
| TGTATCTGGTGGCCCAATTA+TGG | 0.313031 | 2.4:-6730017 | None:intergenic |
| TTCACTGATGGTGGACTGTT+TGG | 0.316044 | 2.4:-6731438 | None:intergenic |
| AGAACTTACTAAAGTGTATC+TGG | 0.332749 | 2.4:-6730031 | None:intergenic |
| CTTGCAAGCTCATAACCATT+TGG | 0.354028 | 2.4:-6731785 | None:intergenic |
| TTTGCCGGAGATTCATCATT+AGG | 0.355777 | 2.4:-6732707 | None:intergenic |
| ACTGCAGCTTCAACATTTGC+CGG | 0.368423 | 2.4:-6732722 | None:intergenic |
| TTTGAAGGAGGAGGCTTGCT+TGG | 0.372918 | 2.4:-6729818 | None:intergenic |
| ATATCTATTCTTCATCCTCC+TGG | 0.379234 | 2.4:+6731755 | MS.gene31164:CDS |
| TTGAAGGAGGAGGCTTGCTT+GGG | 0.393797 | 2.4:-6729817 | None:intergenic |
| TGCAGAAGGAGTGGAGAGAC+AGG | 0.411818 | 2.4:+6734097 | MS.gene31164:intron |
| TGAAGTTCACTTCAGAGATA+TGG | 0.412336 | 2.4:+6731457 | MS.gene31164:CDS |
| TTGCAAGCTCATAACCATTT+GGG | 0.423493 | 2.4:-6731784 | None:intergenic |
| GATATGCAAACCCGCCCATC+AGG | 0.446681 | 2.4:-6731737 | None:intergenic |
| TATCTATTCTTCATCCTCCT+GGG | 0.449275 | 2.4:+6731756 | MS.gene31164:CDS |
| AATGGAGTGTAACCATAATT+GGG | 0.465426 | 2.4:+6730005 | MS.gene31164:CDS |
| AAGGAGGAGGCTTGCTTGGG+AGG | 0.498537 | 2.4:-6729814 | None:intergenic |
| GTATTTGCAGTATATCCTGA+TGG | 0.513643 | 2.4:+6731722 | MS.gene31164:intron |
| TGGTCCTAATGATGAATCTC+CGG | 0.517026 | 2.4:+6732703 | MS.gene31164:CDS |
| CCTCCTGGGGATGACCCAAA+TGG | 0.528218 | 2.4:+6731770 | MS.gene31164:CDS |
| TAACCATTTGGGTCATCCCC+AGG | 0.531119 | 2.4:-6731773 | None:intergenic |
| ATGAGCTTGCAAGTGAGCGC+TGG | 0.535537 | 2.4:+6731795 | MS.gene31164:CDS |
| TGCAGTATATCCTGATGGGC+GGG | 0.538018 | 2.4:+6731727 | MS.gene31164:intron |
| TATTTGCAGTATATCCTGAT+GGG | 0.549933 | 2.4:+6731723 | MS.gene31164:intron |
| TCAATTTCTTGTAGTGAAGG+AGG | 0.560751 | 2.4:+6731378 | MS.gene31164:intron |
| CCAGCGGAAAAGCCATCGAC+GGG | 0.566293 | 2.4:-6729956 | None:intergenic |
| TTGCAGTATATCCTGATGGG+CGG | 0.572889 | 2.4:+6731726 | MS.gene31164:intron |
| TGTTTATATTGCAGAAGGAG+TGG | 0.573707 | 2.4:+6734088 | MS.gene31164:intron |
| CTTTGTAAACATCCCGTCGA+TGG | 0.573847 | 2.4:+6729944 | MS.gene31164:CDS |
| ATCTATTCTTCATCCTCCTG+GGG | 0.574309 | 2.4:+6731757 | MS.gene31164:CDS |
| CCGATGTGTGCGGAAGTCAC+AGG | 0.588338 | 2.4:+6734146 | MS.gene31164:CDS |
| GAAGTGAACTTCACTGATGG+TGG | 0.596810 | 2.4:-6731447 | None:intergenic |
| ACCAGCGGAAAAGCCATCGA+CGG | 0.610363 | 2.4:-6729957 | None:intergenic |
| GGACTGTTTGGATAGTTCGA+CGG | 0.629490 | 2.4:-6731426 | None:intergenic |
| GTTCGACGGAAAGCTCATGA+TGG | 0.632587 | 2.4:-6731412 | None:intergenic |
| TCAGAGATATGGCATCCCAA+TGG | 0.645768 | 2.4:+6731468 | MS.gene31164:CDS |
| CCTGTGACTTCCGCACACAT+CGG | 0.655883 | 2.4:-6734146 | None:intergenic |
| TCTGAAGTGAACTTCACTGA+TGG | 0.656247 | 2.4:-6731450 | None:intergenic |
| AAAAGGTTAGCCGATGTGTG+CGG | 0.675247 | 2.4:+6734136 | MS.gene31164:CDS |
| ACTTACTAAAGTGTATCTGG+TGG | 0.687155 | 2.4:-6730028 | None:intergenic |
| GGTTTCGTCGACTAAACCAG+CGG | 0.711029 | 2.4:-6729972 | None:intergenic |
| CCATTTGGGTCATCCCCAGG+AGG | 0.711844 | 2.4:-6731770 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAGTTAAAAAGAAAT+TGG | + | chr2.4:6732269-6732288 | MS.gene31164:intron | 10.0% |
| !!! | TATGTTTATTTTATTTTCAA+TGG | + | chr2.4:6730696-6730715 | MS.gene31164:intron | 10.0% |
| !! | AAATAAACGAATTGAATTTA+TGG | - | chr2.4:6731854-6731873 | None:intergenic | 15.0% |
| !! | AAATATCATAATCAATAAAC+CGG | - | chr2.4:6730752-6730771 | None:intergenic | 15.0% |
| !! | AATCATGTAAATAAGAAAAA+AGG | - | chr2.4:6732756-6732775 | None:intergenic | 15.0% |
| !! | ATTAAATCGTTATGTTAAAA+AGG | - | chr2.4:6732448-6732467 | None:intergenic | 15.0% |
| !! | TAATATCAATATAGTAGTTT+AGG | + | chr2.4:6733191-6733210 | MS.gene31164:intron | 15.0% |
| !! | TTGATTATGATATTTATTCT+AGG | + | chr2.4:6730757-6730776 | MS.gene31164:intron | 15.0% |
| !!! | ATTTTAAAAAAATTGGTCAT+CGG | - | chr2.4:6732250-6732269 | None:intergenic | 15.0% |
| !!! | TTTAATTTATACTTATTGGT+GGG | + | chr2.4:6730195-6730214 | MS.gene31164:intron | 15.0% |
| !!! | TTTTAATTTATACTTATTGG+TGG | + | chr2.4:6730194-6730213 | MS.gene31164:intron | 15.0% |
| !! | AAAACTTATACCAGTTTATA+AGG | + | chr2.4:6730659-6730678 | MS.gene31164:intron | 20.0% |
| !! | AATATCATAATCAATAAACC+GGG | - | chr2.4:6730751-6730770 | None:intergenic | 20.0% |
| !! | ACAATTATCTAGATCAATAT+CGG | - | chr2.4:6732847-6732866 | None:intergenic | 20.0% |
| !! | ATTAATTTACTTCCTATGAT+TGG | + | chr2.4:6730870-6730889 | MS.gene31164:intron | 20.0% |
| !! | CTTATGTAATGATCATTTAT+TGG | + | chr2.4:6730127-6730146 | MS.gene31164:intron | 20.0% |
| !! | GAGATATCTACATAAATAAT+TGG | - | chr2.4:6732968-6732987 | None:intergenic | 20.0% |
| !! | GATAAAAAGAATACAGATTA+TGG | + | chr2.4:6730345-6730364 | MS.gene31164:intron | 20.0% |
| !! | TTAAGAAAGCTATAAAAAAC+AGG | - | chr2.4:6733710-6733729 | None:intergenic | 20.0% |
| !! | TTATTCATAAGCAAATAAAC+AGG | - | chr2.4:6732622-6732641 | None:intergenic | 20.0% |
| !!! | AGTGTTTTACTAGTAAATAA+AGG | - | chr2.4:6732912-6732931 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTTTGAGACTATT+CGG | - | chr2.4:6730648-6730667 | None:intergenic | 20.0% |
| !!! | GTTTTACTAAGAATATGTTA+TGG | + | chr2.4:6732878-6732897 | MS.gene31164:intron | 20.0% |
| !!! | TGGTTTTAATATTTTCTTGT+GGG | - | chr2.4:6733431-6733450 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGGTTTTTTTGT+TGG | + | chr2.4:6730769-6730788 | MS.gene31164:intron | 20.0% |
| !!! | TTTTATTTGACCTTATAAAC+TGG | - | chr2.4:6730672-6730691 | None:intergenic | 20.0% |
| ! | AAAAACAGGCAAAAGATATT+AGG | - | chr2.4:6733696-6733715 | None:intergenic | 25.0% |
| ! | ATAAGCGATGAAATGAAAAA+AGG | - | chr2.4:6729867-6729886 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr2.4:6730371-6730390 | None:intergenic | 25.0% |
| ! | ATGTGTAGTATTAGGAATTT+AGG | + | chr2.4:6733818-6733837 | MS.gene31164:intron | 25.0% |
| ! | ATTAATTTACTTCATCCGAT+TGG | + | chr2.4:6731058-6731077 | MS.gene31164:intron | 25.0% |
| ! | CATTATTCAATTGATATTGC+TGG | + | chr2.4:6731896-6731915 | MS.gene31164:intron | 25.0% |
| ! | CTACTAGTAGTTATTATCAA+CGG | + | chr2.4:6733654-6733673 | MS.gene31164:intron | 25.0% |
| ! | GACATTTCTTTGATTAAAAC+AGG | + | chr2.4:6731676-6731695 | MS.gene31164:intron | 25.0% |
| ! | GATGAAGTAAATTAATGATG+AGG | - | chr2.4:6731054-6731073 | None:intergenic | 25.0% |
| ! | GTAAAAGAAGTGATATTTGA+AGG | + | chr2.4:6730319-6730338 | MS.gene31164:intron | 25.0% |
| ! | TAACACTTAAATTAGCTGTA+AGG | - | chr2.4:6732472-6732491 | None:intergenic | 25.0% |
| ! | TAAGCGATGAAATGAAAAAA+GGG | - | chr2.4:6729866-6729885 | None:intergenic | 25.0% |
| ! | TAAGTATAAAAAGAGAAGTG+TGG | - | chr2.4:6732797-6732816 | None:intergenic | 25.0% |
| ! | TACTATACACTGTATCAATT+AGG | - | chr2.4:6734012-6734031 | None:intergenic | 25.0% |
| ! | TAGATGCAAAATACTTGTAA+AGG | + | chr2.4:6732033-6732052 | MS.gene31164:intron | 25.0% |
| ! | TAGGAAGTAAATTAATGATG+AGG | - | chr2.4:6730866-6730885 | None:intergenic | 25.0% |
| ! | TATAAGTTGTTTATCCAAAC+AGG | - | chr2.4:6730372-6730391 | None:intergenic | 25.0% |
| ! | TGTTGTTCCTTAAAAAACAT+AGG | - | chr2.4:6731583-6731602 | None:intergenic | 25.0% |
| !! | ATTGATGATATTGTTTCATG+AGG | + | chr2.4:6730279-6730298 | MS.gene31164:intron | 25.0% |
| !! | ATTTATTGGATTTTCTGTGA+TGG | + | chr2.4:6730141-6730160 | MS.gene31164:intron | 25.0% |
| !! | TTTATTGGATTTTCTGTGAT+GGG | + | chr2.4:6730142-6730161 | MS.gene31164:intron | 25.0% |
| !!! | GTAACATCCTATGTTTTTTA+AGG | + | chr2.4:6731573-6731592 | MS.gene31164:intron | 25.0% |
| !!! | GTGGTTTTAATATTTTCTTG+TGG | - | chr2.4:6733432-6733451 | None:intergenic | 25.0% |
| !!! | TAAGTTTTTTGAGACTATTC+GGG | - | chr2.4:6730647-6730666 | None:intergenic | 25.0% |
| !!! | TGATACGTTGATAATAACTA+CGG | + | chr2.4:6733020-6733039 | MS.gene31164:intron | 25.0% |
| AAACAAATAAGCTGAGTAGT+TGG | - | chr2.4:6730972-6730991 | None:intergenic | 30.0% | |
| AAGATCTGTGAGAAAAAGTA+AGG | - | chr2.4:6729927-6729946 | None:intergenic | 30.0% | |
| AATGGAGTGTAACCATAATT+GGG | + | chr2.4:6730005-6730024 | MS.gene31164:CDS | 30.0% | |
| AATTCCAAAACCAATCCAAT+CGG | - | chr2.4:6731264-6731283 | None:intergenic | 30.0% | |
| ACAACACTAATAGTGACAAT+TGG | - | chr2.4:6733847-6733866 | None:intergenic | 30.0% | |
| ACTATTAGTGTTGTCAATTG+TGG | + | chr2.4:6733853-6733872 | MS.gene31164:intron | 30.0% | |
| AGAACTTACTAAAGTGTATC+TGG | - | chr2.4:6730034-6730053 | None:intergenic | 30.0% | |
| ATAACTTTACTGAATGTCCT+TGG | + | chr2.4:6732527-6732546 | MS.gene31164:intron | 30.0% | |
| ATAATGAGTAGATACGAAAG+TGG | + | chr2.4:6733106-6733125 | MS.gene31164:intron | 30.0% | |
| CAACACTAATAGTGACAATT+GGG | - | chr2.4:6733846-6733865 | None:intergenic | 30.0% | |
| CTAAGAATATGTTATGGACT+TGG | + | chr2.4:6732884-6732903 | MS.gene31164:intron | 30.0% | |
| CTTATATTCATAACTTCTCC+AGG | - | chr2.4:6730577-6730596 | None:intergenic | 30.0% | |
| CTTTCAATTTCTTGTAGTGA+AGG | + | chr2.4:6731375-6731394 | MS.gene31164:intron | 30.0% | |
| GAGCATGCTTGTATTTAATA+GGG | + | chr2.4:6731974-6731993 | MS.gene31164:intron | 30.0% | |
| GTAAGGTTAATCAGAAATAG+CGG | - | chr2.4:6729910-6729929 | None:intergenic | 30.0% | |
| GTGATCATAACAAAAGTTGT+GGG | + | chr2.4:6732130-6732149 | MS.gene31164:intron | 30.0% | |
| GTGTTAAACTAGTAACTACT+AGG | + | chr2.4:6733585-6733604 | MS.gene31164:intron | 30.0% | |
| TAACTTTACTGAATGTCCTT+GGG | + | chr2.4:6732528-6732547 | MS.gene31164:intron | 30.0% | |
| TAATGAGTAGATACGAAAGT+GGG | + | chr2.4:6733107-6733126 | MS.gene31164:intron | 30.0% | |
| TACACTCCATTCAAAAATGT+TGG | - | chr2.4:6729996-6730015 | None:intergenic | 30.0% | |
| TAGTTTAGGCATTACTCTTT+AGG | + | chr2.4:6733205-6733224 | MS.gene31164:intron | 30.0% | |
| TATTTGCAGTATATCCTGAT+GGG | + | chr2.4:6731723-6731742 | MS.gene31164:intron | 30.0% | |
| TGATCTAGATAATTGTGCAA+AGG | + | chr2.4:6732851-6732870 | MS.gene31164:intron | 30.0% | |
| TGCAAATTATTATGCTTTCC+CGG | + | chr2.4:6730730-6730749 | MS.gene31164:intron | 30.0% | |
| TGTGATGTTTATATTGCAGA+AGG | + | chr2.4:6734083-6734102 | MS.gene31164:intron | 30.0% | |
| TTAAACAACAAGTCTATAGC+AGG | - | chr2.4:6732414-6732433 | None:intergenic | 30.0% | |
| TTGGTTTCATTTATTTGCAC+TGG | + | chr2.4:6730788-6730807 | MS.gene31164:intron | 30.0% | |
| TTTACTTCCTATGATTGGAT+TGG | + | chr2.4:6730875-6730894 | MS.gene31164:intron | 30.0% | |
| ! | ACGAAACCAACATTTTTGAA+TGG | + | chr2.4:6729987-6730006 | MS.gene31164:CDS | 30.0% |
| ! | ATTCAAAGTATTCAAGACGT+GGG | - | chr2.4:6733471-6733490 | None:intergenic | 30.0% |
| ! | TATTCAAAGTATTCAAGACG+TGG | - | chr2.4:6733472-6733491 | None:intergenic | 30.0% |
| ! | TTATTGGATTTTCTGTGATG+GGG | + | chr2.4:6730143-6730162 | MS.gene31164:intron | 30.0% |
| !! | AAAGTTTTGATAAGCTATCC+TGG | + | chr2.4:6730556-6730575 | MS.gene31164:intron | 30.0% |
| !! | AGATACTCTAAAATGAGTGA+TGG | - | chr2.4:6732345-6732364 | None:intergenic | 30.0% |
| !! | GACAGTTTGGAATATTGTTT+TGG | + | chr2.4:6734042-6734061 | MS.gene31164:intron | 30.0% |
| !! | TTTTCAGAGTTTGGTTCAAT+TGG | + | chr2.4:6730218-6730237 | MS.gene31164:intron | 30.0% |
| !!! | ATCACTCATTTTAGAGTATC+TGG | + | chr2.4:6732344-6732363 | MS.gene31164:intron | 30.0% |
| !!! | CTCTGTTTTAAGATTCCTTT+CGG | + | chr2.4:6733757-6733776 | MS.gene31164:intron | 30.0% |
| !!! | GTTGAACAAACAGCTTTTTT+CGG | - | chr2.4:6733883-6733902 | None:intergenic | 30.0% |
| !!! | TATGAGAATGCTTTTTCTCT+TGG | + | chr2.4:6733278-6733297 | MS.gene31164:intron | 30.0% |
| AAGTCCAAAACCAATCCAAT+CGG | - | chr2.4:6730888-6730907 | None:intergenic | 35.0% | |
| ACTTACTAAAGTGTATCTGG+TGG | - | chr2.4:6730031-6730050 | None:intergenic | 35.0% | |
| AGTATCATATCGATGCTTTC+TGG | + | chr2.4:6732683-6732702 | MS.gene31164:CDS | 35.0% | |
| ATAGGATGTTACTGCAATAC+GGG | - | chr2.4:6731565-6731584 | None:intergenic | 35.0% | |
| ATATCTATTCTTCATCCTCC+TGG | + | chr2.4:6731755-6731774 | MS.gene31164:CDS | 35.0% | |
| ATGTCCATACTGATAATACG+TGG | + | chr2.4:6733609-6733628 | MS.gene31164:intron | 35.0% | |
| CAAGTATGTCAAAACACTCA+TGG | - | chr2.4:6732578-6732597 | None:intergenic | 35.0% | |
| CATAGGATGTTACTGCAATA+CGG | - | chr2.4:6731566-6731585 | None:intergenic | 35.0% | |
| CATTCCACGTATTATCAGTA+TGG | - | chr2.4:6733616-6733635 | None:intergenic | 35.0% | |
| CGAAAGGAATCTTAAAACAG+AGG | - | chr2.4:6733759-6733778 | None:intergenic | 35.0% | |
| CGAGCATGCTTGTATTTAAT+AGG | + | chr2.4:6731973-6731992 | MS.gene31164:intron | 35.0% | |
| CGTGATCATAACAAAAGTTG+TGG | + | chr2.4:6732129-6732148 | MS.gene31164:intron | 35.0% | |
| CTAGTAAAACACTATGTCCT+TGG | + | chr2.4:6732919-6732938 | MS.gene31164:intron | 35.0% | |
| CTATAGCAGGTAAACATTAC+AGG | - | chr2.4:6732401-6732420 | None:intergenic | 35.0% | |
| CTGCAATATAAACATCACAC+AGG | - | chr2.4:6734082-6734101 | None:intergenic | 35.0% | |
| GAATGGAGTGTAACCATAAT+TGG | + | chr2.4:6730004-6730023 | MS.gene31164:CDS | 35.0% | |
| GAGAGACGATTTCAAGAAAA+AGG | + | chr2.4:6734119-6734138 | MS.gene31164:CDS | 35.0% | |
| GTACTTCAATCTTGACAGTT+TGG | + | chr2.4:6734029-6734048 | MS.gene31164:intron | 35.0% | |
| GTATTTGCAGTATATCCTGA+TGG | + | chr2.4:6731722-6731741 | MS.gene31164:intron | 35.0% | |
| TATCTATTCTTCATCCTCCT+GGG | + | chr2.4:6731756-6731775 | MS.gene31164:CDS | 35.0% | |
| TCAATTTCTTGTAGTGAAGG+AGG | + | chr2.4:6731378-6731397 | MS.gene31164:intron | 35.0% | |
| TCCAAAACCAATCCAATCAT+AGG | - | chr2.4:6730885-6730904 | None:intergenic | 35.0% | |
| TCGCTCATAAAACTCAAACT+TGG | - | chr2.4:6733149-6733168 | None:intergenic | 35.0% | |
| TGAAGTTCACTTCAGAGATA+TGG | + | chr2.4:6731457-6731476 | MS.gene31164:CDS | 35.0% | |
| TGACAAACAAATAAGCTGAG+TGG | - | chr2.4:6731352-6731371 | None:intergenic | 35.0% | |
| TGAGAAAATCCAATGATGCA+CGG | - | chr2.4:6731651-6731670 | None:intergenic | 35.0% | |
| TGTAGCATTAAAGCAATCCA+AGG | - | chr2.4:6732939-6732958 | None:intergenic | 35.0% | |
| TGTTTATATTGCAGAAGGAG+TGG | + | chr2.4:6734088-6734107 | MS.gene31164:intron | 35.0% | |
| TTATGTTAAAAAGGCAAGCC+AGG | - | chr2.4:6732439-6732458 | None:intergenic | 35.0% | |
| TTGCAAGCTCATAACCATTT+GGG | - | chr2.4:6731787-6731806 | None:intergenic | 35.0% | |
| TTTACTTCATCCGATTGGAT+TGG | + | chr2.4:6731063-6731082 | MS.gene31164:intron | 35.0% | |
| ! | ACTGAATTTTCCTTAGCTGT+AGG | + | chr2.4:6731182-6731201 | MS.gene31164:intron | 35.0% |
| ! | ACTGGATTTTCATTAGCTGT+AGG | + | chr2.4:6730806-6730825 | MS.gene31164:intron | 35.0% |
| ! | ATTTTCTTGTGGGACTAAGT+TGG | - | chr2.4:6733421-6733440 | None:intergenic | 35.0% |
| ! | CAACAGCAATGTGTACTTTT+AGG | - | chr2.4:6733982-6734001 | None:intergenic | 35.0% |
| ! | TTTTCACGTACTGTATGAAC+AGG | - | chr2.4:6731824-6731843 | None:intergenic | 35.0% |
| ! | TTTTCTTGTGGGACTAAGTT+GGG | - | chr2.4:6733420-6733439 | None:intergenic | 35.0% |
| !! | ACTCTAAAATGAGTGATGGT+CGG | - | chr2.4:6732341-6732360 | None:intergenic | 35.0% |
| !! | TAGACTTGTTGTTTAAGACC+TGG | + | chr2.4:6732418-6732437 | MS.gene31164:intron | 35.0% |
| !!! | AATGTGTACTTTTAGGACAG+AGG | - | chr2.4:6733975-6733994 | None:intergenic | 35.0% |
| !!! | GTGTCGAGTGTTTTTTTGAA+GGG | - | chr2.4:6733366-6733385 | None:intergenic | 35.0% |
| !!! | TACCTTTGAGCTGTTTTTGA+AGG | - | chr2.4:6729836-6729855 | None:intergenic | 35.0% |
| !!! | TCCTATGATTGGATTGGTTT+TGG | + | chr2.4:6730881-6730900 | MS.gene31164:intron | 35.0% |
| !!! | TGTGTCATTTTGAGTACTGA+AGG | + | chr2.4:6733910-6733929 | MS.gene31164:intron | 35.0% |
| AAATTGGTCATCGGATACGT+TGG | - | chr2.4:6732241-6732260 | None:intergenic | 40.0% | |
| AAGTATTCAAGACGTGGGTT+AGG | - | chr2.4:6733466-6733485 | None:intergenic | 40.0% | |
| AAGTCACAGGAAATGTTGTG+AGG | + | chr2.4:6734159-6734178 | MS.gene31164:CDS | 40.0% | |
| ACAAGCAAATCCTACAGCTA+AGG | - | chr2.4:6731007-6731026 | None:intergenic | 40.0% | |
| AGATATTAGGCGCTAAGTTC+TGG | - | chr2.4:6733683-6733702 | None:intergenic | 40.0% | |
| ATACAGATTATGGCCCTGTT+TGG | + | chr2.4:6730355-6730374 | MS.gene31164:intron | 40.0% | |
| ATCTATTCTTCATCCTCCTG+GGG | + | chr2.4:6731757-6731776 | MS.gene31164:CDS | 40.0% | |
| CAGAGAGAAAACCAACCATT+GGG | - | chr2.4:6731486-6731505 | None:intergenic | 40.0% | |
| CTCAGCTTATTTGTTTGCAC+TGG | + | chr2.4:6730976-6730995 | MS.gene31164:intron | 40.0% | |
| CTCCTTCAAAAACAGCTCAA+AGG | + | chr2.4:6729831-6729850 | MS.gene31164:CDS | 40.0% | |
| CTTGCAAGCTCATAACCATT+TGG | - | chr2.4:6731788-6731807 | None:intergenic | 40.0% | |
| GTATGTCAAAACACTCATGG+TGG | - | chr2.4:6732575-6732594 | None:intergenic | 40.0% | |
| GTGGAATGTCTTGTATGCAA+AGG | + | chr2.4:6733628-6733647 | MS.gene31164:intron | 40.0% | |
| TACTGAATGTCCTTGGGATA+TGG | + | chr2.4:6732534-6732553 | MS.gene31164:intron | 40.0% | |
| TCAGAGAGAAAACCAACCAT+TGG | - | chr2.4:6731487-6731506 | None:intergenic | 40.0% | |
| TGATACTCCTAGGATACTCT+TGG | - | chr2.4:6732314-6732333 | None:intergenic | 40.0% | |
| TGGTCCTAATGATGAATCTC+CGG | + | chr2.4:6732703-6732722 | MS.gene31164:CDS | 40.0% | |
| TTTGCCGGAGATTCATCATT+AGG | - | chr2.4:6732710-6732729 | None:intergenic | 40.0% | |
| TTTGCGTCCTAGAGAAGTAA+AGG | + | chr2.4:6732817-6732836 | MS.gene31164:intron | 40.0% | |
| ! | AAAGAGAAGTGTGGTGAAGA+TGG | - | chr2.4:6732788-6732807 | None:intergenic | 40.0% |
| ! | ACTGGATTTTCCTTAGCTGT+AGG | + | chr2.4:6730994-6731013 | MS.gene31164:intron | 40.0% |
| ! | AGTATTCAAGACGTGGGTTA+GGG | - | chr2.4:6733465-6733484 | None:intergenic | 40.0% |
| ! | CAGAGTTTGGTTCAATTGGT+TGG | + | chr2.4:6730222-6730241 | MS.gene31164:intron | 40.0% |
| ! | GATTTTCATCCCTGAACTTG+TGG | - | chr2.4:6733398-6733417 | None:intergenic | 40.0% |
| ! | TCTGAAGTGAACTTCACTGA+TGG | - | chr2.4:6731453-6731472 | None:intergenic | 40.0% |
| !! | GATTTTCTGTGATGGGGTTT+TGG | + | chr2.4:6730149-6730168 | MS.gene31164:intron | 40.0% |
| !! | GGGCTTTTCTTTGTTTACGA+GGG | + | chr2.4:6732150-6732169 | MS.gene31164:intron | 40.0% |
| !! | TATGCATCCAAGAGTATCCT+AGG | + | chr2.4:6732304-6732323 | MS.gene31164:intron | 40.0% |
| !! | TGGGCTTTTCTTTGTTTACG+AGG | + | chr2.4:6732149-6732168 | MS.gene31164:intron | 40.0% |
| !!! | ATTGGTGGGTTTTCAGAGTT+TGG | + | chr2.4:6730209-6730228 | MS.gene31164:intron | 40.0% |
| !!! | CGAGTGTTTTTTTGAAGGGT+GGG | - | chr2.4:6733362-6733381 | None:intergenic | 40.0% |
| !!! | CTTTGAGCTGTTTTTGAAGG+AGG | - | chr2.4:6729833-6729852 | None:intergenic | 40.0% |
| !!! | GGTGTCGAGTGTTTTTTTGA+AGG | - | chr2.4:6733367-6733386 | None:intergenic | 40.0% |
| !!! | TCATCCGATTGGATTGGTTT+TGG | + | chr2.4:6731069-6731088 | MS.gene31164:intron | 40.0% |
| !!! | TCGAGTGTTTTTTTGAAGGG+TGG | - | chr2.4:6733363-6733382 | None:intergenic | 40.0% |
| !!! | TGCTTTTTCTCTTGGCATGT+TGG | + | chr2.4:6733286-6733305 | MS.gene31164:intron | 40.0% |
| !!! | TGTTTTTTTGAAGGGTGGGA+GGG | - | chr2.4:6733358-6733377 | None:intergenic | 40.0% |
| !!! | TTTTAAGATTCCTTTCGGCC+AGG | + | chr2.4:6733762-6733781 | MS.gene31164:intron | 40.0% |
| AAGTGGCATACCATATCCCA+AGG | - | chr2.4:6732547-6732566 | None:intergenic | 45.0% | |
| ACTGCAGCTTCAACATTTGC+CGG | - | chr2.4:6732725-6732744 | None:intergenic | 45.0% | |
| AGATATGGCATCCCAATGGT+TGG | + | chr2.4:6731472-6731491 | MS.gene31164:intron | 45.0% | |
| CATCCGATGCAAAACGTATC+GGG | - | chr2.4:6731616-6731635 | None:intergenic | 45.0% | |
| CGCTAGAGTAGAAGCTTTCT+CGG | + | chr2.4:6732368-6732387 | MS.gene31164:intron | 45.0% | |
| CGGTTTGCCTTTACTTCTCT+AGG | - | chr2.4:6732827-6732846 | None:intergenic | 45.0% | |
| CTTTGTAAACATCCCGTCGA+TGG | + | chr2.4:6729944-6729963 | MS.gene31164:CDS | 45.0% | |
| GAAGTGAACTTCACTGATGG+TGG | - | chr2.4:6731450-6731469 | None:intergenic | 45.0% | |
| GATACGTTGGAGATGCATCA+CGG | - | chr2.4:6732228-6732247 | None:intergenic | 45.0% | |
| GCATCCGATGCAAAACGTAT+CGG | - | chr2.4:6731617-6731636 | None:intergenic | 45.0% | |
| GCTAGAGTAGAAGCTTTCTC+GGG | + | chr2.4:6732369-6732388 | MS.gene31164:intron | 45.0% | |
| GCTGAGTAGTTGGTCAAACT+CGG | - | chr2.4:6730962-6730981 | None:intergenic | 45.0% | |
| GGACTGTTTGGATAGTTCGA+CGG | - | chr2.4:6731429-6731448 | None:intergenic | 45.0% | |
| GGCAAGGGATGTGTAGTATT+AGG | + | chr2.4:6733810-6733829 | MS.gene31164:intron | 45.0% | |
| TCAGAGATATGGCATCCCAA+TGG | + | chr2.4:6731468-6731487 | MS.gene31164:CDS | 45.0% | |
| TGTATCTGGTGGCCCAATTA+TGG | - | chr2.4:6730020-6730039 | None:intergenic | 45.0% | |
| TTGCAGTATATCCTGATGGG+CGG | + | chr2.4:6731726-6731745 | MS.gene31164:intron | 45.0% | |
| ! | AAAAGGTTAGCCGATGTGTG+CGG | + | chr2.4:6734136-6734155 | MS.gene31164:CDS | 45.0% |
| ! | CTGAGTGGTTAGTCAAACTC+AGG | - | chr2.4:6731337-6731356 | None:intergenic | 45.0% |
| ! | GTAACTTGTCCGTGCATCAT+TGG | + | chr2.4:6731639-6731658 | MS.gene31164:intron | 45.0% |
| ! | GTTCCCGATACGTTTTGCAT+CGG | + | chr2.4:6731610-6731629 | MS.gene31164:intron | 45.0% |
| ! | TTTTCTCTTGGCATGTTGGC+AGG | + | chr2.4:6733290-6733309 | MS.gene31164:intron | 45.0% |
| !! | TTCACTGATGGTGGACTGTT+TGG | - | chr2.4:6731441-6731460 | None:intergenic | 45.0% |
| !!! | GTGTTTTTTTGAAGGGTGGG+AGG | - | chr2.4:6733359-6733378 | None:intergenic | 45.0% |
| !!! | TGAGCTGTTTTTGAAGGAGG+AGG | - | chr2.4:6729830-6729849 | None:intergenic | 45.0% |
| !! | AATTAATGAAAAATTAAAAA+AGG | - | chr2.4:6730074-6730093 | None:intergenic | 5.0% |
| !! | ATTAATGAAAAATTAAAAAA+GGG | - | chr2.4:6730073-6730092 | None:intergenic | 5.0% |
| !!! | CTTATTAATTTTAAAAAAAT+TGG | - | chr2.4:6732257-6732276 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTTATACTTAT+TGG | + | chr2.4:6730191-6730210 | MS.gene31164:intron | 5.0% |
| AATAGACATGCCTGGCCGAA+AGG | - | chr2.4:6733775-6733794 | None:intergenic | 50.0% | |
| ATGTTGGCAGGCTTGGCAAT+GGG | + | chr2.4:6733302-6733321 | MS.gene31164:intron | 50.0% | |
| GGGATCTCAATAGACATGCC+TGG | - | chr2.4:6733783-6733802 | None:intergenic | 50.0% | |
| GGTCGGATACTGATACTCCT+AGG | - | chr2.4:6732324-6732343 | None:intergenic | 50.0% | |
| GTTCGACGGAAAGCTCATGA+TGG | - | chr2.4:6731415-6731434 | None:intergenic | 50.0% | |
| TAACCATTTGGGTCATCCCC+AGG | - | chr2.4:6731776-6731795 | None:intergenic | 50.0% | |
| TTCATCCCTGAACTTGTGGC+AGG | - | chr2.4:6733394-6733413 | None:intergenic | 50.0% | |
| TTCCACGTATGCTCTCTTGC+AGG | + | chr2.4:6732643-6732662 | MS.gene31164:intron | 50.0% | |
| ! | GGTTTCGTCGACTAAACCAG+CGG | - | chr2.4:6729975-6729994 | None:intergenic | 50.0% |
| ! | TACCTGCAAGAGAGCATACG+TGG | - | chr2.4:6732648-6732667 | None:intergenic | 50.0% |
| ! | TGCAGTATATCCTGATGGGC+GGG | + | chr2.4:6731727-6731746 | MS.gene31164:intron | 50.0% |
| ! | TTGAAGGAGGAGGCTTGCTT+GGG | - | chr2.4:6729820-6729839 | None:intergenic | 50.0% |
| ! | TTTGAAGGAGGAGGCTTGCT+TGG | - | chr2.4:6729821-6729840 | None:intergenic | 50.0% |
| !! | CACTCATGGTGGACAAGAAG+TGG | - | chr2.4:6732564-6732583 | None:intergenic | 50.0% |
| ACCAGCGGAAAAGCCATCGA+CGG | - | chr2.4:6729960-6729979 | None:intergenic | 55.0% | |
| ATGAGCTTGCAAGTGAGCGC+TGG | + | chr2.4:6731795-6731814 | MS.gene31164:CDS | 55.0% | |
| CATGTTGGCAGGCTTGGCAA+TGG | + | chr2.4:6733301-6733320 | MS.gene31164:intron | 55.0% | |
| CCCTGAACTTGTGGCAGGAA+GGG | - | chr2.4:6733389-6733408 | None:intergenic | 55.0% | |
| CCCTTCCTGCCACAAGTTCA+GGG | + | chr2.4:6733386-6733405 | MS.gene31164:intron | 55.0% | |
| CCTGAACTTGTGGCAGGAAG+GGG | - | chr2.4:6733388-6733407 | None:intergenic | 55.0% | |
| CCTGTGACTTCCGCACACAT+CGG | - | chr2.4:6734149-6734168 | None:intergenic | 55.0% | |
| GATATGCAAACCCGCCCATC+AGG | - | chr2.4:6731740-6731759 | None:intergenic | 55.0% | |
| TCCCTGAACTTGTGGCAGGA+AGG | - | chr2.4:6733390-6733409 | None:intergenic | 55.0% | |
| TCTTGGCATGTTGGCAGGCT+TGG | + | chr2.4:6733295-6733314 | MS.gene31164:intron | 55.0% | |
| TGCAGAAGGAGTGGAGAGAC+AGG | + | chr2.4:6734097-6734116 | MS.gene31164:intron | 55.0% | |
| TGTTGGCAGGCTTGGCAATG+GGG | + | chr2.4:6733303-6733322 | MS.gene31164:intron | 55.0% | |
| CCAGCGGAAAAGCCATCGAC+GGG | - | chr2.4:6729959-6729978 | None:intergenic | 60.0% | |
| CCATTTGGGTCATCCCCAGG+AGG | - | chr2.4:6731773-6731792 | None:intergenic | 60.0% | |
| CCCCTTCCTGCCACAAGTTC+AGG | + | chr2.4:6733385-6733404 | MS.gene31164:intron | 60.0% | |
| CCGATGTGTGCGGAAGTCAC+AGG | + | chr2.4:6734146-6734165 | MS.gene31164:CDS | 60.0% | |
| CCTCCTGGGGATGACCCAAA+TGG | + | chr2.4:6731770-6731789 | MS.gene31164:CDS | 60.0% | |
| GCTTGGCAATGGGGCAGGTA+GGG | + | chr2.4:6733312-6733331 | MS.gene31164:intron | 60.0% | |
| GGCGTGTCGAGAATGAGACG+TGG | + | chr2.4:6733041-6733060 | MS.gene31164:intron | 60.0% | |
| ! | AAGGAGGAGGCTTGCTTGGG+AGG | - | chr2.4:6729817-6729836 | None:intergenic | 60.0% |
| !! | AGACGTGGGTTAGGGTGAGC+AGG | - | chr2.4:6733457-6733476 | None:intergenic | 60.0% |
| !! | GACGTGGGTTAGGGTGAGCA+GGG | - | chr2.4:6733456-6733475 | None:intergenic | 60.0% |
| GCAATGGGGCAGGTAGGGAC+GGG | + | chr2.4:6733317-6733336 | MS.gene31164:intron | 65.0% | |
| GGCAATGGGGCAGGTAGGGA+CGG | + | chr2.4:6733316-6733335 | MS.gene31164:intron | 65.0% | |
| GGCTTGGCAATGGGGCAGGT+AGG | + | chr2.4:6733311-6733330 | MS.gene31164:intron | 65.0% | |
| GGGTTAGGGTGAGCAGGGTG+TGG | - | chr2.4:6733451-6733470 | None:intergenic | 65.0% | |
| ! | CCCGTCGATGGCTTTTCCGC+TGG | + | chr2.4:6729956-6729975 | MS.gene31164:CDS | 65.0% |
| GGCAGGCTTGGCAATGGGGC+AGG | + | chr2.4:6733307-6733326 | MS.gene31164:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 6729810 | 6734179 | 6729810 | ID=MS.gene31164 |
| chr2.4 | mRNA | 6729810 | 6734179 | 6729810 | ID=MS.gene31164.t1;Parent=MS.gene31164 |
| chr2.4 | exon | 6729810 | 6729852 | 6729810 | ID=MS.gene31164.t1.exon1;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6729810 | 6729852 | 6729810 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| chr2.4 | exon | 6729942 | 6730044 | 6729942 | ID=MS.gene31164.t1.exon2;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6729942 | 6730044 | 6729942 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| chr2.4 | exon | 6731392 | 6731489 | 6731392 | ID=MS.gene31164.t1.exon3;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6731392 | 6731489 | 6731392 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| chr2.4 | exon | 6731732 | 6731832 | 6731732 | ID=MS.gene31164.t1.exon4;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6731732 | 6731832 | 6731732 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| chr2.4 | exon | 6732665 | 6732742 | 6732665 | ID=MS.gene31164.t1.exon5;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6732665 | 6732742 | 6732665 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| chr2.4 | exon | 6734102 | 6734179 | 6734102 | ID=MS.gene31164.t1.exon6;Parent=MS.gene31164.t1 |
| chr2.4 | CDS | 6734102 | 6734179 | 6734102 | ID=cds.MS.gene31164.t1;Parent=MS.gene31164.t1 |
| Gene Sequence |
| Protein sequence |
