Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30950.t1 | XP_013465378.1 | 100 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 2.70E-92 | 347.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30950.t1 | Q42540 | 92.7 | 165 | 12 | 0 | 1 | 165 | 1 | 165 | 7.1e-89 | 327.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30950.t1 | A0A072VDB4 | 100.0 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 2.0e-92 | 347.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene30950 | -0.830438 | 2.94E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene30950 | -0.821943 | 3.09E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene30950 | 0.823122 | 1.64E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene30950 | -0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene30950 | -0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene05081 | MS.gene30950 | -0.804191 | 2.43E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene30950 | -0.827841 | 1.25E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene30950 | -0.823947 | 1.05E-53 | -1.69E-46 |
| MS.gene051552 | MS.gene30950 | 0.815204 | 1.04E-51 | -1.69E-46 |
| MS.gene052128 | MS.gene30950 | 0.945932 | 1.21E-104 | -1.69E-46 |
| MS.gene052346 | MS.gene30950 | -0.80605 | 9.93E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene30950 | -0.828959 | 6.73E-55 | -1.69E-46 |
| MS.gene052505 | MS.gene30950 | -0.830264 | 3.24E-55 | -1.69E-46 |
| MS.gene053873 | MS.gene30950 | -0.81804 | 2.41E-52 | -1.69E-46 |
| MS.gene054107 | MS.gene30950 | -0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene30950 | 0.832237 | 1.06E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene30950 | -0.806223 | 9.13E-50 | -1.69E-46 |
| MS.gene055536 | MS.gene30950 | 0.801651 | 8.14E-49 | -1.69E-46 |
| MS.gene056095 | MS.gene30950 | 0.812335 | 4.47E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene30950 | -0.81323 | 2.84E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene30950 | -0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene30950 | -0.801255 | 9.82E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene30950 | -0.806608 | 7.57E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene30950 | -0.830775 | 2.43E-55 | -1.69E-46 |
| MS.gene058444 | MS.gene30950 | -0.814583 | 1.43E-51 | -1.69E-46 |
| MS.gene059512 | MS.gene30950 | -0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene30950 | -0.813854 | 2.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30950 | MS.gene049594 | PPI |
| MS.gene58462 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene81045 | PPI |
| MS.gene53889 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene065876 | PPI |
| MS.gene051019 | MS.gene30950 | PPI |
| MS.gene75306 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene25036 | PPI |
| MS.gene30950 | MS.gene64374 | PPI |
| MS.gene21760 | MS.gene30950 | PPI |
| MS.gene031760 | MS.gene30950 | PPI |
| MS.gene058107 | MS.gene30950 | PPI |
| MS.gene26246 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene84510 | PPI |
| MS.gene67704 | MS.gene30950 | PPI |
| MS.gene017247 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene66898 | PPI |
| MS.gene98656 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene21866 | PPI |
| MS.gene30950 | MS.gene05127 | PPI |
| MS.gene30950 | MS.gene024777 | PPI |
| MS.gene98045 | MS.gene30950 | PPI |
| MS.gene08461 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene006545 | PPI |
| MS.gene40316 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene58463 | PPI |
| MS.gene033148 | MS.gene30950 | PPI |
| MS.gene038898 | MS.gene30950 | PPI |
| MS.gene30950 | MS.gene014659 | PPI |
| MS.gene30950 | MS.gene009653 | PPI |
| MS.gene92627 | MS.gene30950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30950.t1 | MTR_2g096690 | 100.000 | 166 | 0 | 0 | 1 | 166 | 1 | 166 | 4.24e-124 | 346 |
| MS.gene30950.t1 | MTR_2g096690 | 99.398 | 166 | 0 | 1 | 1 | 166 | 1 | 165 | 2.13e-121 | 339 |
| MS.gene30950.t1 | MTR_4g063490 | 93.373 | 166 | 11 | 0 | 1 | 166 | 1 | 166 | 3.55e-107 | 303 |
| MS.gene30950.t1 | MTR_2g096690 | 99.138 | 116 | 1 | 0 | 1 | 116 | 1 | 116 | 1.29e-84 | 244 |
| MS.gene30950.t1 | MTR_8g468530 | 35.802 | 162 | 90 | 2 | 1 | 162 | 17 | 164 | 2.14e-33 | 116 |
| MS.gene30950.t1 | MTR_4g108080 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 6.50e-33 | 114 |
| MS.gene30950.t1 | MTR_7g116940 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 2.21e-30 | 108 |
| MS.gene30950.t1 | MTR_3g062450 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 7.46e-29 | 104 |
| MS.gene30950.t1 | MTR_5g075580 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.68e-29 | 103 |
| MS.gene30950.t1 | MTR_1g021150 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 3.58e-28 | 102 |
| MS.gene30950.t1 | MTR_4g073240 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 4.26e-28 | 102 |
| MS.gene30950.t1 | MTR_7g116940 | 34.756 | 164 | 86 | 3 | 5 | 161 | 2 | 151 | 2.29e-27 | 100 |
| MS.gene30950.t1 | MTR_8g071040 | 33.758 | 157 | 90 | 2 | 5 | 161 | 2 | 144 | 3.29e-27 | 100 |
| MS.gene30950.t1 | MTR_4g076200 | 36.184 | 152 | 82 | 3 | 9 | 160 | 37 | 173 | 6.15e-26 | 97.8 |
| MS.gene30950.t1 | MTR_4g108080 | 34.307 | 137 | 69 | 2 | 34 | 162 | 25 | 148 | 1.26e-25 | 96.3 |
| MS.gene30950.t1 | MTR_4g076200 | 36.641 | 131 | 69 | 2 | 30 | 160 | 16 | 132 | 6.20e-25 | 94.0 |
| MS.gene30950.t1 | MTR_1g095510 | 36.774 | 155 | 84 | 2 | 3 | 157 | 40 | 180 | 1.33e-24 | 94.7 |
| MS.gene30950.t1 | MTR_5g009020 | 34.868 | 152 | 84 | 3 | 9 | 160 | 37 | 173 | 8.89e-24 | 92.0 |
| MS.gene30950.t1 | MTR_1g095510 | 39.062 | 128 | 64 | 2 | 30 | 157 | 13 | 126 | 3.01e-23 | 89.7 |
| MS.gene30950.t1 | MTR_5g075580 | 32.812 | 128 | 73 | 1 | 34 | 161 | 1 | 115 | 4.08e-23 | 88.6 |
| MS.gene30950.t1 | MTR_2g078010 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 4.74e-23 | 89.4 |
| MS.gene30950.t1 | MTR_7g116940 | 39.516 | 124 | 60 | 3 | 5 | 128 | 2 | 110 | 8.21e-23 | 88.2 |
| MS.gene30950.t1 | MTR_4g073240 | 33.594 | 128 | 72 | 1 | 34 | 161 | 1 | 115 | 8.32e-23 | 87.8 |
| MS.gene30950.t1 | MTR_2g078010 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 8.64e-23 | 89.0 |
| MS.gene30950.t1 | MTR_1g021150 | 33.088 | 136 | 77 | 2 | 26 | 161 | 31 | 152 | 8.92e-23 | 89.0 |
| MS.gene30950.t1 | MTR_4g108080 | 35.772 | 123 | 65 | 2 | 1 | 123 | 1 | 109 | 2.41e-22 | 86.7 |
| MS.gene30950.t1 | MTR_3g110110 | 33.613 | 119 | 65 | 2 | 28 | 145 | 28 | 133 | 8.43e-22 | 86.3 |
| MS.gene30950.t1 | MTR_5g016630 | 34.109 | 129 | 74 | 2 | 33 | 161 | 37 | 154 | 9.75e-21 | 83.6 |
| MS.gene30950.t1 | MTR_4g094872 | 32.075 | 159 | 93 | 2 | 1 | 155 | 1 | 148 | 1.29e-20 | 83.2 |
| MS.gene30950.t1 | MTR_8g085690 | 34.615 | 130 | 71 | 2 | 2 | 131 | 20 | 135 | 9.16e-20 | 81.3 |
| MS.gene30950.t1 | MTR_2g078010 | 30.201 | 149 | 76 | 3 | 11 | 145 | 12 | 146 | 7.95e-19 | 79.0 |
| MS.gene30950.t1 | MTR_3g098780 | 28.986 | 138 | 82 | 4 | 9 | 144 | 7 | 130 | 2.43e-18 | 78.2 |
| MS.gene30950.t1 | MTR_3g098780 | 28.986 | 138 | 82 | 4 | 9 | 144 | 31 | 154 | 3.59e-18 | 78.2 |
| MS.gene30950.t1 | MTR_2g078010 | 31.579 | 114 | 64 | 2 | 11 | 124 | 12 | 111 | 3.69e-16 | 70.5 |
| MS.gene30950.t1 | MTR_1g095510 | 34.400 | 125 | 69 | 1 | 3 | 127 | 40 | 151 | 4.01e-16 | 72.0 |
| MS.gene30950.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 15 | 121 | 2.38e-14 | 66.6 |
| MS.gene30950.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 63 | 169 | 4.29e-14 | 67.0 |
| MS.gene30950.t1 | MTR_5g019480 | 30.000 | 120 | 71 | 1 | 40 | 159 | 66 | 172 | 4.77e-14 | 66.6 |
| MS.gene30950.t1 | MTR_8g076490 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.69e-12 | 62.0 |
| MS.gene30950.t1 | MTR_5g021260 | 32.143 | 112 | 60 | 3 | 9 | 119 | 20 | 116 | 8.97e-12 | 60.1 |
| MS.gene30950.t1 | MTR_7g087590 | 26.207 | 145 | 93 | 2 | 9 | 153 | 15 | 145 | 1.78e-11 | 60.8 |
| MS.gene30950.t1 | MTR_8g023380 | 29.412 | 136 | 66 | 6 | 1 | 127 | 1 | 115 | 4.87e-11 | 59.7 |
| MS.gene30950.t1 | MTR_4g121960 | 28.205 | 156 | 81 | 6 | 1 | 148 | 7 | 139 | 5.46e-11 | 60.1 |
| MS.gene30950.t1 | MTR_4g106690 | 24.051 | 158 | 103 | 5 | 10 | 164 | 6 | 149 | 8.53e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30950.t1 | AT5G59300 | 92.169 | 166 | 13 | 0 | 1 | 166 | 1 | 166 | 1.15e-107 | 304 |
| MS.gene30950.t1 | AT3G46460 | 91.566 | 166 | 14 | 0 | 1 | 166 | 1 | 166 | 6.80e-106 | 300 |
| MS.gene30950.t1 | AT3G55380 | 87.805 | 164 | 20 | 0 | 3 | 166 | 4 | 167 | 3.14e-100 | 285 |
| MS.gene30950.t1 | AT3G55380 | 71.717 | 198 | 22 | 1 | 3 | 166 | 4 | 201 | 3.85e-92 | 266 |
| MS.gene30950.t1 | AT3G46460 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.89e-78 | 229 |
| MS.gene30950.t1 | AT3G46460 | 90.598 | 117 | 11 | 0 | 50 | 166 | 8 | 124 | 1.89e-78 | 229 |
| MS.gene30950.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene30950.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene30950.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene30950.t1 | AT2G02760 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.47e-33 | 115 |
| MS.gene30950.t1 | AT1G14400 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.51e-33 | 115 |
| MS.gene30950.t1 | AT1G14400 | 35.802 | 162 | 90 | 2 | 1 | 162 | 1 | 148 | 3.51e-33 | 115 |
| MS.gene30950.t1 | AT5G62540 | 36.420 | 162 | 89 | 2 | 1 | 162 | 1 | 148 | 1.32e-32 | 114 |
| MS.gene30950.t1 | AT3G08700 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 8.93e-30 | 106 |
| MS.gene30950.t1 | AT3G08700 | 33.758 | 157 | 91 | 1 | 5 | 161 | 2 | 145 | 8.93e-30 | 106 |
| MS.gene30950.t1 | AT3G08690 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.07e-30 | 106 |
| MS.gene30950.t1 | AT3G08690 | 35.669 | 157 | 87 | 2 | 5 | 161 | 2 | 144 | 9.07e-30 | 106 |
| MS.gene30950.t1 | AT1G64230 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.75e-29 | 105 |
| MS.gene30950.t1 | AT1G64230 | 36.306 | 157 | 86 | 2 | 5 | 161 | 2 | 144 | 3.75e-29 | 105 |
| MS.gene30950.t1 | AT4G27960 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 6.72e-29 | 104 |
| MS.gene30950.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene30950.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene30950.t1 | AT5G41700 | 35.032 | 157 | 88 | 2 | 5 | 161 | 2 | 144 | 1.72e-28 | 103 |
| MS.gene30950.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene30950.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene30950.t1 | AT5G53300 | 34.395 | 157 | 89 | 2 | 5 | 161 | 2 | 144 | 3.44e-28 | 102 |
| MS.gene30950.t1 | AT4G27960 | 34.161 | 161 | 92 | 2 | 1 | 161 | 28 | 174 | 5.17e-28 | 103 |
| MS.gene30950.t1 | AT5G56150 | 33.121 | 157 | 91 | 2 | 5 | 161 | 2 | 144 | 6.95e-27 | 99.4 |
| MS.gene30950.t1 | AT5G41700 | 34.177 | 158 | 89 | 3 | 5 | 161 | 2 | 145 | 2.75e-26 | 97.8 |
| MS.gene30950.t1 | AT1G64230 | 32.727 | 165 | 90 | 2 | 5 | 161 | 2 | 153 | 8.89e-26 | 96.7 |
| MS.gene30950.t1 | AT2G16740 | 31.210 | 157 | 94 | 2 | 5 | 161 | 2 | 144 | 5.35e-24 | 91.7 |
| MS.gene30950.t1 | AT1G64230 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.92e-23 | 91.7 |
| MS.gene30950.t1 | AT1G64230 | 35.000 | 120 | 65 | 1 | 33 | 152 | 71 | 177 | 1.92e-23 | 91.7 |
| MS.gene30950.t1 | AT1G50490 | 35.878 | 131 | 70 | 2 | 30 | 160 | 60 | 176 | 2.80e-23 | 90.9 |
| MS.gene30950.t1 | AT5G25760 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.88e-23 | 90.1 |
| MS.gene30950.t1 | AT5G25760 | 34.932 | 146 | 78 | 4 | 2 | 145 | 3 | 133 | 2.88e-23 | 90.1 |
| MS.gene30950.t1 | AT1G16890 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 3.91e-23 | 89.7 |
| MS.gene30950.t1 | AT1G78870 | 33.333 | 135 | 76 | 2 | 11 | 145 | 12 | 132 | 5.29e-23 | 89.4 |
| MS.gene30950.t1 | AT3G20060 | 34.211 | 152 | 85 | 3 | 9 | 160 | 41 | 177 | 8.35e-23 | 89.7 |
| MS.gene30950.t1 | AT3G20060 | 34.351 | 131 | 72 | 2 | 30 | 160 | 16 | 132 | 3.85e-22 | 86.7 |
| MS.gene30950.t1 | AT5G41700 | 37.607 | 117 | 59 | 2 | 5 | 121 | 2 | 104 | 2.25e-21 | 85.1 |
| MS.gene30950.t1 | AT1G16890 | 34.127 | 126 | 69 | 2 | 20 | 145 | 30 | 141 | 3.93e-21 | 84.7 |
| MS.gene30950.t1 | AT3G57870 | 34.437 | 151 | 84 | 2 | 9 | 155 | 10 | 149 | 6.26e-21 | 84.3 |
| MS.gene30950.t1 | AT1G36340 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.64e-21 | 84.0 |
| MS.gene30950.t1 | AT1G36340 | 35.606 | 132 | 71 | 2 | 24 | 155 | 27 | 144 | 6.64e-21 | 84.0 |
| MS.gene30950.t1 | AT5G53300 | 37.069 | 116 | 59 | 2 | 4 | 119 | 1 | 102 | 1.30e-20 | 82.0 |
| MS.gene30950.t1 | AT1G16890 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.72e-20 | 82.0 |
| MS.gene30950.t1 | AT1G78870 | 33.945 | 109 | 59 | 1 | 37 | 145 | 4 | 99 | 1.76e-20 | 82.0 |
| MS.gene30950.t1 | AT3G24515 | 32.143 | 168 | 97 | 3 | 2 | 161 | 4 | 162 | 3.55e-20 | 86.3 |
| MS.gene30950.t1 | AT5G56150 | 34.483 | 116 | 62 | 2 | 5 | 120 | 2 | 103 | 3.86e-20 | 80.9 |
| MS.gene30950.t1 | AT1G78870 | 33.636 | 110 | 59 | 2 | 37 | 145 | 4 | 100 | 1.07e-18 | 77.4 |
| MS.gene30950.t1 | AT3G24515 | 32.558 | 129 | 78 | 2 | 33 | 161 | 68 | 187 | 1.44e-17 | 79.0 |
| MS.gene30950.t1 | AT5G50870 | 29.710 | 138 | 81 | 4 | 9 | 144 | 7 | 130 | 2.16e-17 | 75.9 |
| MS.gene30950.t1 | AT5G50870 | 29.927 | 137 | 80 | 4 | 9 | 143 | 7 | 129 | 7.38e-17 | 74.7 |
| MS.gene30950.t1 | AT3G13550 | 31.544 | 149 | 85 | 3 | 9 | 154 | 41 | 175 | 1.10e-16 | 73.6 |
| MS.gene30950.t1 | AT1G78870 | 31.304 | 115 | 65 | 2 | 11 | 125 | 12 | 112 | 1.46e-16 | 71.6 |
| MS.gene30950.t1 | AT3G13550 | 32.787 | 122 | 68 | 2 | 9 | 130 | 41 | 148 | 1.95e-14 | 67.4 |
| MS.gene30950.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene30950.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene30950.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene30950.t1 | AT5G05080 | 27.586 | 145 | 91 | 2 | 9 | 153 | 15 | 145 | 3.96e-14 | 68.2 |
| MS.gene30950.t1 | AT2G18600 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.16e-14 | 67.0 |
| MS.gene30950.t1 | AT2G18600 | 28.571 | 133 | 81 | 2 | 31 | 163 | 57 | 175 | 4.16e-14 | 67.0 |
| MS.gene30950.t1 | AT4G36800 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.67e-14 | 66.6 |
| MS.gene30950.t1 | AT4G36800 | 29.661 | 118 | 70 | 1 | 42 | 159 | 66 | 170 | 6.67e-14 | 66.6 |
| MS.gene30950.t1 | AT1G45050 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 1.08e-12 | 62.8 |
| MS.gene30950.t1 | AT1G63800 | 25.974 | 154 | 98 | 4 | 10 | 161 | 6 | 145 | 1.63e-12 | 62.8 |
| MS.gene30950.t1 | AT1G75440 | 30.833 | 120 | 67 | 3 | 1 | 119 | 12 | 116 | 1.79e-12 | 62.0 |
| MS.gene30950.t1 | AT5G42990 | 30.973 | 113 | 62 | 3 | 9 | 120 | 20 | 117 | 2.07e-12 | 62.0 |
| MS.gene30950.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.66e-12 | 62.0 |
| MS.gene30950.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 6 | 145 | 2.66e-12 | 62.0 |
| MS.gene30950.t1 | AT2G46030 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.73e-12 | 62.0 |
| MS.gene30950.t1 | AT2G46030 | 30.709 | 127 | 73 | 3 | 37 | 161 | 35 | 148 | 2.73e-12 | 62.0 |
| MS.gene30950.t1 | AT1G63800 | 28.906 | 128 | 76 | 3 | 36 | 161 | 16 | 130 | 5.10e-12 | 61.2 |
| MS.gene30950.t1 | AT2G46030 | 27.273 | 154 | 96 | 4 | 10 | 161 | 78 | 217 | 8.09e-12 | 62.0 |
| MS.gene30950.t1 | AT5G41340 | 28.906 | 128 | 76 | 3 | 36 | 161 | 31 | 145 | 9.00e-12 | 60.8 |
| MS.gene30950.t1 | AT3G17000 | 30.769 | 130 | 60 | 6 | 11 | 131 | 18 | 126 | 1.17e-11 | 62.0 |
| MS.gene30950.t1 | AT1G17280 | 29.861 | 144 | 78 | 6 | 1 | 137 | 1 | 128 | 2.37e-11 | 60.5 |
| MS.gene30950.t1 | AT1G45050 | 34.118 | 85 | 53 | 2 | 9 | 92 | 20 | 102 | 4.66e-11 | 57.4 |
| MS.gene30950.t1 | AT5G50430 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 6.87e-11 | 59.3 |
| MS.gene30950.t1 | AT5G50430 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 6.87e-11 | 59.3 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
| MS.gene30950.t1 | AT1G17280 | 30.137 | 146 | 69 | 7 | 1 | 137 | 1 | 122 | 8.54e-11 | 58.9 |
Find 44 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGGAGTGTAACCATAAT+TGG | 0.137403 | 2.2:+5405005 | MS.gene30950:CDS |
| AGTATCATATCGATGCTTTC+TGG | 0.256685 | 2.2:+5407502 | MS.gene30950:CDS |
| GAGAGACGATTTCAAGAAAA+AGG | 0.291595 | 2.2:+5408938 | MS.gene30950:CDS |
| TGTATCTGGTGGCCCAATTA+TGG | 0.313031 | 2.2:-5405018 | None:intergenic |
| TTCACTGATGGTGGACTGTT+TGG | 0.316044 | 2.2:-5406257 | None:intergenic |
| AGAACTTACTAAAGTGTATC+TGG | 0.332749 | 2.2:-5405032 | None:intergenic |
| CTTGCAAGCTCATAACCATT+TGG | 0.354028 | 2.2:-5406604 | None:intergenic |
| TTTGCCGGAGATTCATCATT+AGG | 0.355777 | 2.2:-5407526 | None:intergenic |
| ACTGCAGCTTCAACATTTGC+CGG | 0.368423 | 2.2:-5407541 | None:intergenic |
| TTTGAAGGAGGAGGCTTGCT+TGG | 0.372918 | 2.2:-5404819 | None:intergenic |
| ATATCTATTCTTCATCCTCC+TGG | 0.379234 | 2.2:+5406574 | MS.gene30950:CDS |
| TTGAAGGAGGAGGCTTGCTT+GGG | 0.393797 | 2.2:-5404818 | None:intergenic |
| TGCAGAAGGAGTGGAGAGAC+AGG | 0.411818 | 2.2:+5408916 | MS.gene30950:intron |
| TGAAGTTCACTTCAGAGATA+TGG | 0.412336 | 2.2:+5406276 | MS.gene30950:CDS |
| TTGCAAGCTCATAACCATTT+GGG | 0.423493 | 2.2:-5406603 | None:intergenic |
| GATATGCAAACCCGCCCATC+AGG | 0.446681 | 2.2:-5406556 | None:intergenic |
| TATCTATTCTTCATCCTCCT+GGG | 0.449275 | 2.2:+5406575 | MS.gene30950:CDS |
| AATGGAGTGTAACCATAATT+GGG | 0.465426 | 2.2:+5405006 | MS.gene30950:CDS |
| AAGGAGGAGGCTTGCTTGGG+AGG | 0.498537 | 2.2:-5404815 | None:intergenic |
| GTATTTGCAGTATATCCTGA+TGG | 0.513643 | 2.2:+5406541 | MS.gene30950:intron |
| TGGTCCTAATGATGAATCTC+CGG | 0.517026 | 2.2:+5407522 | MS.gene30950:CDS |
| CCTCCTGGGGATGACCCAAA+TGG | 0.528218 | 2.2:+5406589 | MS.gene30950:CDS |
| TAACCATTTGGGTCATCCCC+AGG | 0.531119 | 2.2:-5406592 | None:intergenic |
| ATGAGCTTGCAAGTGAGCGC+TGG | 0.535537 | 2.2:+5406614 | MS.gene30950:CDS |
| TGCAGTATATCCTGATGGGC+GGG | 0.538018 | 2.2:+5406546 | MS.gene30950:intron |
| TATTTGCAGTATATCCTGAT+GGG | 0.549933 | 2.2:+5406542 | MS.gene30950:intron |
| TCAATTTCTTGTAGTGAAGG+AGG | 0.560751 | 2.2:+5406197 | MS.gene30950:intron |
| CCAGCGGAAAAGCCATCGAC+GGG | 0.566293 | 2.2:-5404957 | None:intergenic |
| TTGCAGTATATCCTGATGGG+CGG | 0.572889 | 2.2:+5406545 | MS.gene30950:intron |
| TGTTTATATTGCAGAAGGAG+TGG | 0.573707 | 2.2:+5408907 | MS.gene30950:intron |
| CTTTGTAAACATCCCGTCGA+TGG | 0.573847 | 2.2:+5404945 | MS.gene30950:CDS |
| ATCTATTCTTCATCCTCCTG+GGG | 0.574309 | 2.2:+5406576 | MS.gene30950:CDS |
| CCGATGTGTGCGGAAGTCAC+AGG | 0.588338 | 2.2:+5408965 | MS.gene30950:CDS |
| GAAGTGAACTTCACTGATGG+TGG | 0.596810 | 2.2:-5406266 | None:intergenic |
| ACCAGCGGAAAAGCCATCGA+CGG | 0.610363 | 2.2:-5404958 | None:intergenic |
| GGACTGTTTGGATAGTTCGA+CGG | 0.629490 | 2.2:-5406245 | None:intergenic |
| GTTCGACGGAAAGCTCATGA+TGG | 0.632587 | 2.2:-5406231 | None:intergenic |
| TCAGAGATATGGCATCCCAA+TGG | 0.645768 | 2.2:+5406287 | MS.gene30950:CDS |
| CCTGTGACTTCCGCACACAT+CGG | 0.655883 | 2.2:-5408965 | None:intergenic |
| TCTGAAGTGAACTTCACTGA+TGG | 0.656247 | 2.2:-5406269 | None:intergenic |
| AAAAGGTTAGCCGATGTGTG+CGG | 0.675247 | 2.2:+5408955 | MS.gene30950:CDS |
| ACTTACTAAAGTGTATCTGG+TGG | 0.687155 | 2.2:-5405029 | None:intergenic |
| GGTTTCGTCGACTAAACCAG+CGG | 0.711029 | 2.2:-5404973 | None:intergenic |
| CCATTTGGGTCATCCCCAGG+AGG | 0.711844 | 2.2:-5406589 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAGTTAAAAAGAAAT+TGG | + | chr2.2:5407088-5407107 | MS.gene30950:intron | 10.0% |
| !! | AAATAAACGAATTGAATTTA+TGG | - | chr2.2:5406673-5406692 | None:intergenic | 15.0% |
| !! | AAATATCATAATCAATAAAC+CGG | - | chr2.2:5405759-5405778 | None:intergenic | 15.0% |
| !! | AATCATGTAAATAAGAAAAA+AGG | - | chr2.2:5407575-5407594 | None:intergenic | 15.0% |
| !! | ATTAAATCGTTATGTTAAAA+AGG | - | chr2.2:5407267-5407286 | None:intergenic | 15.0% |
| !! | CTTATAAAATGATCATTTAT+TGG | + | chr2.2:5405134-5405153 | MS.gene30950:intron | 15.0% |
| !! | TAATATCAATATAGTAGTTT+AGG | + | chr2.2:5408010-5408029 | MS.gene30950:intron | 15.0% |
| !! | TTGATTATGATATTTATTCT+AGG | + | chr2.2:5405764-5405783 | MS.gene30950:intron | 15.0% |
| !!! | ATTTTAAAAAAATTGGTCAT+CGG | - | chr2.2:5407069-5407088 | None:intergenic | 15.0% |
| !!! | GTTTTACTAATAATATGTTA+TGG | + | chr2.2:5407697-5407716 | MS.gene30950:intron | 15.0% |
| !!! | TTTAATTTATACTTATTGGT+GGG | + | chr2.2:5405202-5405221 | MS.gene30950:intron | 15.0% |
| !!! | TTTTAATTTATACTTATTGG+TGG | + | chr2.2:5405201-5405220 | MS.gene30950:intron | 15.0% |
| !! | AAAACTTATACCAGTTTATA+AGG | + | chr2.2:5405666-5405685 | MS.gene30950:intron | 20.0% |
| !! | AATATCATAATCAATAAACC+GGG | - | chr2.2:5405758-5405777 | None:intergenic | 20.0% |
| !! | ACAATTATCTAGATCAATAT+CGG | - | chr2.2:5407666-5407685 | None:intergenic | 20.0% |
| !! | ATTAATTTACTTCCTATGAT+TGG | + | chr2.2:5405877-5405896 | MS.gene30950:intron | 20.0% |
| !! | GAGATATCTACATAAATAAT+TGG | - | chr2.2:5407787-5407806 | None:intergenic | 20.0% |
| !! | GATAAAAAGAATACAGATTA+TGG | + | chr2.2:5405352-5405371 | MS.gene30950:intron | 20.0% |
| !! | TTAAGAAAGCTATAAAAAAC+AGG | - | chr2.2:5408529-5408548 | None:intergenic | 20.0% |
| !! | TTATTCATAAGCAAATAAAC+AGG | - | chr2.2:5407441-5407460 | None:intergenic | 20.0% |
| !!! | AGTGTTTTACTAGTAAATAA+AGG | - | chr2.2:5407731-5407750 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTTTGAGACTATT+CGG | - | chr2.2:5405655-5405674 | None:intergenic | 20.0% |
| !!! | TGGTTTTAATATTTTCTTGT+GGG | - | chr2.2:5408250-5408269 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGGTTTTTTTGT+TGG | + | chr2.2:5405776-5405795 | MS.gene30950:intron | 20.0% |
| !!! | TTTTATTTGACCTTATAAAC+TGG | - | chr2.2:5405679-5405698 | None:intergenic | 20.0% |
| ! | AAAAACAGGCAAAAGATATT+AGG | - | chr2.2:5408515-5408534 | None:intergenic | 25.0% |
| ! | ATAAGCGATGAAATGAAAAA+AGG | - | chr2.2:5404868-5404887 | None:intergenic | 25.0% |
| ! | ATGTGTAGTATTAGGAATTT+AGG | + | chr2.2:5408637-5408656 | MS.gene30950:intron | 25.0% |
| ! | ATTAATTTACTTCATCCGAT+TGG | + | chr2.2:5406065-5406084 | MS.gene30950:intron | 25.0% |
| ! | CATTATTCAATTGATATTGC+TGG | + | chr2.2:5406715-5406734 | MS.gene30950:intron | 25.0% |
| ! | CTAATAATATGTTATGGACT+TGG | + | chr2.2:5407703-5407722 | MS.gene30950:intron | 25.0% |
| ! | CTACTAGTAGTTATTATCAA+CGG | + | chr2.2:5408473-5408492 | MS.gene30950:intron | 25.0% |
| ! | GACATTTCTTTGATTAAAAC+AGG | + | chr2.2:5406495-5406514 | MS.gene30950:intron | 25.0% |
| ! | GATGAAGTAAATTAATGATG+AGG | - | chr2.2:5406061-5406080 | None:intergenic | 25.0% |
| ! | GTAAAAGAAGTGATATTTGA+AGG | + | chr2.2:5405326-5405345 | MS.gene30950:intron | 25.0% |
| ! | TAACACTTAAATTAGCTGTA+AGG | - | chr2.2:5407291-5407310 | None:intergenic | 25.0% |
| ! | TAAGCGATGAAATGAAAAAA+GGG | - | chr2.2:5404867-5404886 | None:intergenic | 25.0% |
| ! | TAAGTATAAAAAGAGAAGTG+TGG | - | chr2.2:5407616-5407635 | None:intergenic | 25.0% |
| ! | TAGATGCAAAATACTTGTAA+AGG | + | chr2.2:5406852-5406871 | MS.gene30950:intron | 25.0% |
| ! | TAGGAAGTAAATTAATGATG+AGG | - | chr2.2:5405873-5405892 | None:intergenic | 25.0% |
| ! | TGTAAGCTTACATAAGTTAT+AGG | + | chr2.2:5405501-5405520 | MS.gene30950:intron | 25.0% |
| ! | TGTTGTTCCTTAAAAAACAT+AGG | - | chr2.2:5406402-5406421 | None:intergenic | 25.0% |
| !! | ATTGATGATATTGTTTCATG+AGG | + | chr2.2:5405286-5405305 | MS.gene30950:intron | 25.0% |
| !! | ATTTATTGGATTTTCTGTGA+TGG | + | chr2.2:5405148-5405167 | MS.gene30950:intron | 25.0% |
| !! | TTTATTGGATTTTCTGTGAT+GGG | + | chr2.2:5405149-5405168 | MS.gene30950:intron | 25.0% |
| !!! | GTAACATCCTATGTTTTTTA+AGG | + | chr2.2:5406392-5406411 | MS.gene30950:intron | 25.0% |
| !!! | GTGGTTTTAATATTTTCTTG+TGG | - | chr2.2:5408251-5408270 | None:intergenic | 25.0% |
| !!! | TAAGTTTTTTGAGACTATTC+GGG | - | chr2.2:5405654-5405673 | None:intergenic | 25.0% |
| !!! | TGATACGTTGATAATAACTA+CGG | + | chr2.2:5407839-5407858 | MS.gene30950:intron | 25.0% |
| AAACAAATAAGCTGAGTAGT+TGG | - | chr2.2:5405979-5405998 | None:intergenic | 30.0% | |
| AAGATCTGTGAGAAAAAGTA+AGG | - | chr2.2:5404928-5404947 | None:intergenic | 30.0% | |
| AATGGAGTGTAACCATAATT+GGG | + | chr2.2:5405006-5405025 | MS.gene30950:CDS | 30.0% | |
| AATTCCAAAACCAATCCAAT+CGG | - | chr2.2:5406083-5406102 | None:intergenic | 30.0% | |
| AGAACTTACTAAAGTGTATC+TGG | - | chr2.2:5405035-5405054 | None:intergenic | 30.0% | |
| ATAACTTTACTGAATGTCCT+TGG | + | chr2.2:5407346-5407365 | MS.gene30950:intron | 30.0% | |
| ATAAGTTGTTTATCCGAACA+GGG | - | chr2.2:5405378-5405397 | None:intergenic | 30.0% | |
| ATAATGAGTAGATACGAAAG+TGG | + | chr2.2:5407925-5407944 | MS.gene30950:intron | 30.0% | |
| CTTATATTCATAACTTCTCC+AGG | - | chr2.2:5405584-5405603 | None:intergenic | 30.0% | |
| CTTTCAATTTCTTGTAGTGA+AGG | + | chr2.2:5406194-5406213 | MS.gene30950:intron | 30.0% | |
| GAGCATGCTTGTATTTAATA+GGG | + | chr2.2:5406793-5406812 | MS.gene30950:intron | 30.0% | |
| GTAAGGTTAATCAGAAATAG+CGG | - | chr2.2:5404911-5404930 | None:intergenic | 30.0% | |
| GTGATCATAACAAAAGTTGT+GGG | + | chr2.2:5406949-5406968 | MS.gene30950:intron | 30.0% | |
| GTGTTAAACTAGTAACTACT+AGG | + | chr2.2:5408404-5408423 | MS.gene30950:intron | 30.0% | |
| TAACTTTACTGAATGTCCTT+GGG | + | chr2.2:5407347-5407366 | MS.gene30950:intron | 30.0% | |
| TAATGAGTAGATACGAAAGT+GGG | + | chr2.2:5407926-5407945 | MS.gene30950:intron | 30.0% | |
| TACACTCCATTCAAAAATGT+TGG | - | chr2.2:5404997-5405016 | None:intergenic | 30.0% | |
| TAGTTTAGGCATTACTCTTT+AGG | + | chr2.2:5408024-5408043 | MS.gene30950:intron | 30.0% | |
| TATAAGTTGTTTATCCGAAC+AGG | - | chr2.2:5405379-5405398 | None:intergenic | 30.0% | |
| TATTTGCAGTATATCCTGAT+GGG | + | chr2.2:5406542-5406561 | MS.gene30950:intron | 30.0% | |
| TGATCTAGATAATTGTGCAA+AGG | + | chr2.2:5407670-5407689 | MS.gene30950:intron | 30.0% | |
| TGCAAATTATTATGCTTTCC+CGG | + | chr2.2:5405737-5405756 | MS.gene30950:intron | 30.0% | |
| TGCTATACACTGTATCAATT+AGG | - | chr2.2:5408831-5408850 | None:intergenic | 30.0% | |
| TGTGATGTTTATATTGCAGA+AGG | + | chr2.2:5408902-5408921 | MS.gene30950:intron | 30.0% | |
| TTAAACAACAAGTCTATAGC+AGG | - | chr2.2:5407233-5407252 | None:intergenic | 30.0% | |
| TTGGTTTCATTTATTTGCAC+TGG | + | chr2.2:5405795-5405814 | MS.gene30950:intron | 30.0% | |
| TTTACTTCCTATGATTGGAT+TGG | + | chr2.2:5405882-5405901 | MS.gene30950:intron | 30.0% | |
| ! | ACGAAACCAACATTTTTGAA+TGG | + | chr2.2:5404988-5405007 | MS.gene30950:CDS | 30.0% |
| ! | ATTCAAAGTATTCAAGACGT+GGG | - | chr2.2:5408290-5408309 | None:intergenic | 30.0% |
| ! | CTACAAGAAATTGAAAGCAT+TGG | - | chr2.2:5406191-5406210 | None:intergenic | 30.0% |
| ! | TATTCAAAGTATTCAAGACG+TGG | - | chr2.2:5408291-5408310 | None:intergenic | 30.0% |
| ! | TTATTGGATTTTCTGTGATG+GGG | + | chr2.2:5405150-5405169 | MS.gene30950:intron | 30.0% |
| !! | AAAGTTTTGATAAGCTATCC+TGG | + | chr2.2:5405563-5405582 | MS.gene30950:intron | 30.0% |
| !! | AGATACTCTAAAATGAGTGA+TGG | - | chr2.2:5407164-5407183 | None:intergenic | 30.0% |
| !! | GACAGTTTGGAATATTGTTT+TGG | + | chr2.2:5408861-5408880 | MS.gene30950:intron | 30.0% |
| !! | TTTTCAGAGTTTGGTTCAAT+TGG | + | chr2.2:5405225-5405244 | MS.gene30950:intron | 30.0% |
| !!! | ATCACTCATTTTAGAGTATC+TGG | + | chr2.2:5407163-5407182 | MS.gene30950:intron | 30.0% |
| !!! | CTCTGTTTTAAGATTCCTTT+CGG | + | chr2.2:5408576-5408595 | MS.gene30950:intron | 30.0% |
| !!! | GTTGAACAAACAGCTTTTTT+CGG | - | chr2.2:5408702-5408721 | None:intergenic | 30.0% |
| !!! | TATGAGAATGCTTTTTCTCT+TGG | + | chr2.2:5408097-5408116 | MS.gene30950:intron | 30.0% |
| ACAACACTAATGGTGACAAT+TGG | - | chr2.2:5408666-5408685 | None:intergenic | 35.0% | |
| ACCATTAGTGTTGTCAATTG+TGG | + | chr2.2:5408672-5408691 | MS.gene30950:intron | 35.0% | |
| ACTTACTAAAGTGTATCTGG+TGG | - | chr2.2:5405032-5405051 | None:intergenic | 35.0% | |
| AGTATCATATCGATGCTTTC+TGG | + | chr2.2:5407502-5407521 | MS.gene30950:CDS | 35.0% | |
| ATAGGATGTTACTGCAATAC+GGG | - | chr2.2:5406384-5406403 | None:intergenic | 35.0% | |
| ATATCTATTCTTCATCCTCC+TGG | + | chr2.2:5406574-5406593 | MS.gene30950:CDS | 35.0% | |
| ATGTCCATACTGATAATACG+TGG | + | chr2.2:5408428-5408447 | MS.gene30950:intron | 35.0% | |
| CAACACTAATGGTGACAATT+GGG | - | chr2.2:5408665-5408684 | None:intergenic | 35.0% | |
| CAAGTATGTCAAAACACTCA+TGG | - | chr2.2:5407397-5407416 | None:intergenic | 35.0% | |
| CATAGGATGTTACTGCAATA+CGG | - | chr2.2:5406385-5406404 | None:intergenic | 35.0% | |
| CATTCCACGTATTATCAGTA+TGG | - | chr2.2:5408435-5408454 | None:intergenic | 35.0% | |
| CGAAAGGAATCTTAAAACAG+AGG | - | chr2.2:5408578-5408597 | None:intergenic | 35.0% | |
| CGAGCATGCTTGTATTTAAT+AGG | + | chr2.2:5406792-5406811 | MS.gene30950:intron | 35.0% | |
| CGTGATCATAACAAAAGTTG+TGG | + | chr2.2:5406948-5406967 | MS.gene30950:intron | 35.0% | |
| CTAGTAAAACACTATGTCCT+TGG | + | chr2.2:5407738-5407757 | MS.gene30950:intron | 35.0% | |
| CTATAGCAGGTAAACATTAC+AGG | - | chr2.2:5407220-5407239 | None:intergenic | 35.0% | |
| CTGCAATATAAACATCACAC+AGG | - | chr2.2:5408901-5408920 | None:intergenic | 35.0% | |
| GAATGGAGTGTAACCATAAT+TGG | + | chr2.2:5405005-5405024 | MS.gene30950:CDS | 35.0% | |
| GAGAGACGATTTCAAGAAAA+AGG | + | chr2.2:5408938-5408957 | MS.gene30950:CDS | 35.0% | |
| GTATTTGCAGTATATCCTGA+TGG | + | chr2.2:5406541-5406560 | MS.gene30950:intron | 35.0% | |
| TATCTATTCTTCATCCTCCT+GGG | + | chr2.2:5406575-5406594 | MS.gene30950:CDS | 35.0% | |
| TCAATTTCTTGTAGTGAAGG+AGG | + | chr2.2:5406197-5406216 | MS.gene30950:intron | 35.0% | |
| TCCAAAACCAATCCAATCAT+AGG | - | chr2.2:5405892-5405911 | None:intergenic | 35.0% | |
| TCCACAATTGACAACACTAA+TGG | - | chr2.2:5408676-5408695 | None:intergenic | 35.0% | |
| TCGCTCATAAAACTCAAACT+TGG | - | chr2.2:5407968-5407987 | None:intergenic | 35.0% | |
| TGAAGTTCACTTCAGAGATA+TGG | + | chr2.2:5406276-5406295 | MS.gene30950:CDS | 35.0% | |
| TGAGAAAATCCAATGATGCA+CGG | - | chr2.2:5406470-5406489 | None:intergenic | 35.0% | |
| TGTAGCATTAAAGCAATCCA+AGG | - | chr2.2:5407758-5407777 | None:intergenic | 35.0% | |
| TGTTTATATTGCAGAAGGAG+TGG | + | chr2.2:5408907-5408926 | MS.gene30950:intron | 35.0% | |
| TTATGTTAAAAAGGCAAGCC+AGG | - | chr2.2:5407258-5407277 | None:intergenic | 35.0% | |
| TTGCAAGCTCATAACCATTT+GGG | - | chr2.2:5406606-5406625 | None:intergenic | 35.0% | |
| TTTACTTCATCCGATTGGAT+TGG | + | chr2.2:5406070-5406089 | MS.gene30950:intron | 35.0% | |
| ! | ACTGGATTTTCATTAGCTGT+AGG | + | chr2.2:5405813-5405832 | MS.gene30950:intron | 35.0% |
| ! | ATTTTCTTGTGGGACTAAGT+TGG | - | chr2.2:5408240-5408259 | None:intergenic | 35.0% |
| ! | TTTTCACGTACTGTATGAAC+AGG | - | chr2.2:5406643-5406662 | None:intergenic | 35.0% |
| ! | TTTTCTTGTGGGACTAAGTT+GGG | - | chr2.2:5408239-5408258 | None:intergenic | 35.0% |
| !! | ACTCTAAAATGAGTGATGGT+CGG | - | chr2.2:5407160-5407179 | None:intergenic | 35.0% |
| !! | TAGACTTGTTGTTTAAGACC+TGG | + | chr2.2:5407237-5407256 | MS.gene30950:intron | 35.0% |
| !!! | GTGTCGTGTGTTTTTTTGAA+GGG | - | chr2.2:5408185-5408204 | None:intergenic | 35.0% |
| !!! | TACCTTTGAGCTGTTTTTGA+AGG | - | chr2.2:5404837-5404856 | None:intergenic | 35.0% |
| !!! | TCCTATGATTGGATTGGTTT+TGG | + | chr2.2:5405888-5405907 | MS.gene30950:intron | 35.0% |
| !!! | TGTGTCATTTTGAGTACTGA+AGG | + | chr2.2:5408729-5408748 | MS.gene30950:intron | 35.0% |
| AAATTGGTCATCGGATACGT+TGG | - | chr2.2:5407060-5407079 | None:intergenic | 40.0% | |
| AAGTATTCAAGACGTGGGTT+AGG | - | chr2.2:5408285-5408304 | None:intergenic | 40.0% | |
| ACAAGCAAATCCTACAGCTA+AGG | - | chr2.2:5406014-5406033 | None:intergenic | 40.0% | |
| ATACAGATTATGGCCCTGTT+CGG | + | chr2.2:5405362-5405381 | MS.gene30950:intron | 40.0% | |
| ATCTATTCTTCATCCTCCTG+GGG | + | chr2.2:5406576-5406595 | MS.gene30950:CDS | 40.0% | |
| CAGAGAGAAAACCAACCATT+GGG | - | chr2.2:5406305-5406324 | None:intergenic | 40.0% | |
| CTCAGCTTATTTGTTTGCAC+TGG | + | chr2.2:5405983-5406002 | MS.gene30950:intron | 40.0% | |
| CTCCTTCAAAAACAGCTCAA+AGG | + | chr2.2:5404832-5404851 | MS.gene30950:CDS | 40.0% | |
| CTTGCAAGCTCATAACCATT+TGG | - | chr2.2:5406607-5406626 | None:intergenic | 40.0% | |
| GCACTTCAATCTTGACAGTT+TGG | + | chr2.2:5408848-5408867 | MS.gene30950:intron | 40.0% | |
| GTATGTCAAAACACTCATGG+TGG | - | chr2.2:5407394-5407413 | None:intergenic | 40.0% | |
| GTGGAATGTCTTGTATGCAA+AGG | + | chr2.2:5408447-5408466 | MS.gene30950:intron | 40.0% | |
| TACTGAATGTCCTTGGGATA+TGG | + | chr2.2:5407353-5407372 | MS.gene30950:intron | 40.0% | |
| TCAGAGAGAAAACCAACCAT+TGG | - | chr2.2:5406306-5406325 | None:intergenic | 40.0% | |
| TCTATTGAGATCCCTACACT+TGG | + | chr2.2:5408608-5408627 | MS.gene30950:intron | 40.0% | |
| TGATACTCCTAGGATACTCT+TGG | - | chr2.2:5407133-5407152 | None:intergenic | 40.0% | |
| TGGCAAACAAATAAGCTGAG+TGG | - | chr2.2:5406171-5406190 | None:intergenic | 40.0% | |
| TGGTCCTAATGATGAATCTC+CGG | + | chr2.2:5407522-5407541 | MS.gene30950:CDS | 40.0% | |
| TTTGCCGGAGATTCATCATT+AGG | - | chr2.2:5407529-5407548 | None:intergenic | 40.0% | |
| TTTGCGTCCTAGAGAAGTAA+AGG | + | chr2.2:5407636-5407655 | MS.gene30950:intron | 40.0% | |
| ! | AAAGAGAAGTGTGGTGAAGA+AGG | - | chr2.2:5407607-5407626 | None:intergenic | 40.0% |
| ! | ACTGGATTTTCCTTAGCTGT+AGG | + | chr2.2:5406001-5406020 | MS.gene30950:intron | 40.0% |
| ! | AGTATTCAAGACGTGGGTTA+GGG | - | chr2.2:5408284-5408303 | None:intergenic | 40.0% |
| ! | CAGAGTTTGGTTCAATTGGT+TGG | + | chr2.2:5405229-5405248 | MS.gene30950:intron | 40.0% |
| ! | GATTTTCATCCCTGAACTTG+TGG | - | chr2.2:5408217-5408236 | None:intergenic | 40.0% |
| ! | TCTGAAGTGAACTTCACTGA+TGG | - | chr2.2:5406272-5406291 | None:intergenic | 40.0% |
| !! | GATTTTCTGTGATGGGGTTT+TGG | + | chr2.2:5405156-5405175 | MS.gene30950:intron | 40.0% |
| !! | GGGCTTTTCTTTGTTTACGA+GGG | + | chr2.2:5406969-5406988 | MS.gene30950:intron | 40.0% |
| !! | TATGCATCCAAGAGTATCCT+AGG | + | chr2.2:5407123-5407142 | MS.gene30950:intron | 40.0% |
| !! | TGGGCTTTTCTTTGTTTACG+AGG | + | chr2.2:5406968-5406987 | MS.gene30950:intron | 40.0% |
| !!! | AATGGTTGGTTTTCTCTCTG+AGG | + | chr2.2:5406305-5406324 | MS.gene30950:intron | 40.0% |
| !!! | ATTGGTGGGTTTTCAGAGTT+TGG | + | chr2.2:5405216-5405235 | MS.gene30950:intron | 40.0% |
| !!! | CGTGTGTTTTTTTGAAGGGT+GGG | - | chr2.2:5408181-5408200 | None:intergenic | 40.0% |
| !!! | CTTTGAGCTGTTTTTGAAGG+AGG | - | chr2.2:5404834-5404853 | None:intergenic | 40.0% |
| !!! | GGTGTCGTGTGTTTTTTTGA+AGG | - | chr2.2:5408186-5408205 | None:intergenic | 40.0% |
| !!! | TCATCCGATTGGATTGGTTT+TGG | + | chr2.2:5406076-5406095 | MS.gene30950:intron | 40.0% |
| !!! | TCGTGTGTTTTTTTGAAGGG+TGG | - | chr2.2:5408182-5408201 | None:intergenic | 40.0% |
| !!! | TGCTTTTTCTCTTGGCATGT+TGG | + | chr2.2:5408105-5408124 | MS.gene30950:intron | 40.0% |
| !!! | TGTTTTTTTGAAGGGTGGGA+GGG | - | chr2.2:5408177-5408196 | None:intergenic | 40.0% |
| !!! | TTTTAAGATTCCTTTCGGCC+AGG | + | chr2.2:5408581-5408600 | MS.gene30950:intron | 40.0% |
| AAGTGGCATACCATATCCCA+AGG | - | chr2.2:5407366-5407385 | None:intergenic | 45.0% | |
| ACTGCAGCTTCAACATTTGC+CGG | - | chr2.2:5407544-5407563 | None:intergenic | 45.0% | |
| AGATATGGCATCCCAATGGT+TGG | + | chr2.2:5406291-5406310 | MS.gene30950:intron | 45.0% | |
| CATCCGATGCAAAACGTATC+GGG | - | chr2.2:5406435-5406454 | None:intergenic | 45.0% | |
| CGCTAGAGTAGAAGCTTTCT+CGG | + | chr2.2:5407187-5407206 | MS.gene30950:intron | 45.0% | |
| CGGTTTGCCTTTACTTCTCT+AGG | - | chr2.2:5407646-5407665 | None:intergenic | 45.0% | |
| CTTTGTAAACATCCCGTCGA+TGG | + | chr2.2:5404945-5404964 | MS.gene30950:CDS | 45.0% | |
| GAAGTGAACTTCACTGATGG+TGG | - | chr2.2:5406269-5406288 | None:intergenic | 45.0% | |
| GATACGTTGGAGATGCATCA+CGG | - | chr2.2:5407047-5407066 | None:intergenic | 45.0% | |
| GCATCCGATGCAAAACGTAT+CGG | - | chr2.2:5406436-5406455 | None:intergenic | 45.0% | |
| GCTAGAGTAGAAGCTTTCTC+GGG | + | chr2.2:5407188-5407207 | MS.gene30950:intron | 45.0% | |
| GCTGAGTAGTTGGTCAAACT+CGG | - | chr2.2:5405969-5405988 | None:intergenic | 45.0% | |
| GGACTGTTTGGATAGTTCGA+CGG | - | chr2.2:5406248-5406267 | None:intergenic | 45.0% | |
| GGCAAGGGATGTGTAGTATT+AGG | + | chr2.2:5408629-5408648 | MS.gene30950:intron | 45.0% | |
| TCAGAGATATGGCATCCCAA+TGG | + | chr2.2:5406287-5406306 | MS.gene30950:CDS | 45.0% | |
| TGTATCTGGTGGCCCAATTA+TGG | - | chr2.2:5405021-5405040 | None:intergenic | 45.0% | |
| TTGCAGTATATCCTGATGGG+CGG | + | chr2.2:5406545-5406564 | MS.gene30950:intron | 45.0% | |
| ! | AAAAGGTTAGCCGATGTGTG+CGG | + | chr2.2:5408955-5408974 | MS.gene30950:CDS | 45.0% |
| ! | CTGAGTGGTTAGTCAAACTC+AGG | - | chr2.2:5406156-5406175 | None:intergenic | 45.0% |
| ! | GTAACTTGTCCGTGCATCAT+TGG | + | chr2.2:5406458-5406477 | MS.gene30950:intron | 45.0% |
| ! | GTTCCCGATACGTTTTGCAT+CGG | + | chr2.2:5406429-5406448 | MS.gene30950:intron | 45.0% |
| ! | TTTTCTCTTGGCATGTTGGC+AGG | + | chr2.2:5408109-5408128 | MS.gene30950:intron | 45.0% |
| !! | TTCACTGATGGTGGACTGTT+TGG | - | chr2.2:5406260-5406279 | None:intergenic | 45.0% |
| !!! | GTGTTTTTTTGAAGGGTGGG+AGG | - | chr2.2:5408178-5408197 | None:intergenic | 45.0% |
| !!! | TGAGCTGTTTTTGAAGGAGG+AGG | - | chr2.2:5404831-5404850 | None:intergenic | 45.0% |
| !! | AATTAATGAAAAATTAAAAA+AGG | - | chr2.2:5405081-5405100 | None:intergenic | 5.0% |
| !! | ATTAATGAAAAATTAAAAAA+GGG | - | chr2.2:5405080-5405099 | None:intergenic | 5.0% |
| !!! | CTTATTAATTTTAAAAAAAT+TGG | - | chr2.2:5407076-5407095 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTTATACTTAT+TGG | + | chr2.2:5405198-5405217 | MS.gene30950:intron | 5.0% |
| AATAGACATGCCTGGCCGAA+AGG | - | chr2.2:5408594-5408613 | None:intergenic | 50.0% | |
| ACACATCCCTTGCCAAGTGT+AGG | - | chr2.2:5408623-5408642 | None:intergenic | 50.0% | |
| ATGTTGGCAGGCTTGGCAAT+GGG | + | chr2.2:5408121-5408140 | MS.gene30950:intron | 50.0% | |
| CACATCCCTTGCCAAGTGTA+GGG | - | chr2.2:5408622-5408641 | None:intergenic | 50.0% | |
| GAGATCCCTACACTTGGCAA+GGG | + | chr2.2:5408614-5408633 | MS.gene30950:intron | 50.0% | |
| GGGATCTCAATAGACATGCC+TGG | - | chr2.2:5408602-5408621 | None:intergenic | 50.0% | |
| GGTCGGATACTGATACTCCT+AGG | - | chr2.2:5407143-5407162 | None:intergenic | 50.0% | |
| GTTCGACGGAAAGCTCATGA+TGG | - | chr2.2:5406234-5406253 | None:intergenic | 50.0% | |
| TAACCATTTGGGTCATCCCC+AGG | - | chr2.2:5406595-5406614 | None:intergenic | 50.0% | |
| TGAGATCCCTACACTTGGCA+AGG | + | chr2.2:5408613-5408632 | MS.gene30950:intron | 50.0% | |
| TTCATCCCTGAACTTGTGGC+AGG | - | chr2.2:5408213-5408232 | None:intergenic | 50.0% | |
| TTCCACGTATGCTCTCTTGC+AGG | + | chr2.2:5407462-5407481 | MS.gene30950:intron | 50.0% | |
| ! | GGTTTCGTCGACTAAACCAG+CGG | - | chr2.2:5404976-5404995 | None:intergenic | 50.0% |
| ! | TACCTGCAAGAGAGCATACG+TGG | - | chr2.2:5407467-5407486 | None:intergenic | 50.0% |
| ! | TGCAGTATATCCTGATGGGC+GGG | + | chr2.2:5406546-5406565 | MS.gene30950:intron | 50.0% |
| ! | TTGAAGGAGGAGGCTTGCTT+GGG | - | chr2.2:5404821-5404840 | None:intergenic | 50.0% |
| ! | TTTGAAGGAGGAGGCTTGCT+TGG | - | chr2.2:5404822-5404841 | None:intergenic | 50.0% |
| !! | CACTCATGGTGGACAAGAAG+TGG | - | chr2.2:5407383-5407402 | None:intergenic | 50.0% |
| ACCAGCGGAAAAGCCATCGA+CGG | - | chr2.2:5404961-5404980 | None:intergenic | 55.0% | |
| ATGAGCTTGCAAGTGAGCGC+TGG | + | chr2.2:5406614-5406633 | MS.gene30950:CDS | 55.0% | |
| CATGTTGGCAGGCTTGGCAA+TGG | + | chr2.2:5408120-5408139 | MS.gene30950:intron | 55.0% | |
| CCCTGAACTTGTGGCAGGAA+GGG | - | chr2.2:5408208-5408227 | None:intergenic | 55.0% | |
| CCCTTCCTGCCACAAGTTCA+GGG | + | chr2.2:5408205-5408224 | MS.gene30950:intron | 55.0% | |
| CCTGAACTTGTGGCAGGAAG+GGG | - | chr2.2:5408207-5408226 | None:intergenic | 55.0% | |
| CCTGTGACTTCCGCACACAT+CGG | - | chr2.2:5408968-5408987 | None:intergenic | 55.0% | |
| GATATGCAAACCCGCCCATC+AGG | - | chr2.2:5406559-5406578 | None:intergenic | 55.0% | |
| TCCCTGAACTTGTGGCAGGA+AGG | - | chr2.2:5408209-5408228 | None:intergenic | 55.0% | |
| TCTTGGCATGTTGGCAGGCT+TGG | + | chr2.2:5408114-5408133 | MS.gene30950:intron | 55.0% | |
| TGCAGAAGGAGTGGAGAGAC+AGG | + | chr2.2:5408916-5408935 | MS.gene30950:intron | 55.0% | |
| TGTTGGCAGGCTTGGCAATG+GGG | + | chr2.2:5408122-5408141 | MS.gene30950:intron | 55.0% | |
| CCAGCGGAAAAGCCATCGAC+GGG | - | chr2.2:5404960-5404979 | None:intergenic | 60.0% | |
| CCATTTGGGTCATCCCCAGG+AGG | - | chr2.2:5406592-5406611 | None:intergenic | 60.0% | |
| CCCCTTCCTGCCACAAGTTC+AGG | + | chr2.2:5408204-5408223 | MS.gene30950:intron | 60.0% | |
| CCGATGTGTGCGGAAGTCAC+AGG | + | chr2.2:5408965-5408984 | MS.gene30950:CDS | 60.0% | |
| CCTCCTGGGGATGACCCAAA+TGG | + | chr2.2:5406589-5406608 | MS.gene30950:CDS | 60.0% | |
| GCTTGGCAATGGGGCAGGTA+GGG | + | chr2.2:5408131-5408150 | MS.gene30950:intron | 60.0% | |
| GGCGTGTCGAGAATGAGACG+TGG | + | chr2.2:5407860-5407879 | MS.gene30950:intron | 60.0% | |
| ! | AAGGAGGAGGCTTGCTTGGG+AGG | - | chr2.2:5404818-5404837 | None:intergenic | 60.0% |
| !! | AGACGTGGGTTAGGGTGAGC+AGG | - | chr2.2:5408276-5408295 | None:intergenic | 60.0% |
| !! | GACGTGGGTTAGGGTGAGCA+GGG | - | chr2.2:5408275-5408294 | None:intergenic | 60.0% |
| GCAATGGGGCAGGTAGGGAC+GGG | + | chr2.2:5408136-5408155 | MS.gene30950:intron | 65.0% | |
| GGCAATGGGGCAGGTAGGGA+CGG | + | chr2.2:5408135-5408154 | MS.gene30950:intron | 65.0% | |
| GGCTTGGCAATGGGGCAGGT+AGG | + | chr2.2:5408130-5408149 | MS.gene30950:intron | 65.0% | |
| GGGTTAGGGTGAGCAGGGTG+TGG | - | chr2.2:5408270-5408289 | None:intergenic | 65.0% | |
| ! | CCCGTCGATGGCTTTTCCGC+TGG | + | chr2.2:5404957-5404976 | MS.gene30950:CDS | 65.0% |
| GGCAGGCTTGGCAATGGGGC+AGG | + | chr2.2:5408126-5408145 | MS.gene30950:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 5404811 | 5408998 | 5404811 | ID=MS.gene30950 |
| chr2.2 | mRNA | 5404811 | 5408998 | 5404811 | ID=MS.gene30950.t1;Parent=MS.gene30950 |
| chr2.2 | exon | 5404811 | 5404853 | 5404811 | ID=MS.gene30950.t1.exon1;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5404811 | 5404853 | 5404811 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| chr2.2 | exon | 5404943 | 5405045 | 5404943 | ID=MS.gene30950.t1.exon2;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5404943 | 5405045 | 5404943 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| chr2.2 | exon | 5406211 | 5406308 | 5406211 | ID=MS.gene30950.t1.exon3;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5406211 | 5406308 | 5406211 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| chr2.2 | exon | 5406551 | 5406651 | 5406551 | ID=MS.gene30950.t1.exon4;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5406551 | 5406651 | 5406551 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| chr2.2 | exon | 5407484 | 5407561 | 5407484 | ID=MS.gene30950.t1.exon5;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5407484 | 5407561 | 5407484 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| chr2.2 | exon | 5408921 | 5408998 | 5408921 | ID=MS.gene30950.t1.exon6;Parent=MS.gene30950.t1 |
| chr2.2 | CDS | 5408921 | 5408998 | 5408921 | ID=cds.MS.gene30950.t1;Parent=MS.gene30950.t1 |
| Gene Sequence |
| Protein sequence |
