Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006701.t1 | XP_024638558.1 | 98.3 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 1.30E-247 | 865.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006701.t1 | P46643 | 81.5 | 406 | 75 | 0 | 19 | 424 | 25 | 430 | 8.4e-203 | 707.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006701.t1 | G7JCN3 | 98.3 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 9.4e-248 | 865.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006701 | MS.gene060918 | PPI |
| MS.gene006701 | MS.gene33167 | PPI |
| MS.gene006701 | MS.gene016021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006701.t1 | MTR_4g080140 | 98.349 | 424 | 7 | 0 | 1 | 424 | 1 | 424 | 0.0 | 877 |
| MS.gene006701.t1 | MTR_4g080130 | 88.706 | 425 | 36 | 3 | 1 | 424 | 1 | 414 | 0.0 | 783 |
| MS.gene006701.t1 | MTR_3g110065 | 51.378 | 399 | 192 | 1 | 25 | 421 | 16 | 414 | 9.57e-148 | 426 |
| MS.gene006701.t1 | MTR_3g110065 | 51.378 | 399 | 192 | 1 | 25 | 421 | 56 | 454 | 6.27e-147 | 426 |
| MS.gene006701.t1 | MTR_3g110065 | 51.330 | 376 | 181 | 1 | 25 | 398 | 56 | 431 | 3.34e-138 | 402 |
| MS.gene006701.t1 | MTR_1g013050 | 48.354 | 395 | 202 | 2 | 25 | 417 | 63 | 457 | 9.64e-136 | 397 |
| MS.gene006701.t1 | MTR_4g014910 | 54.167 | 48 | 22 | 0 | 296 | 343 | 24 | 71 | 5.31e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006701.t1 | AT2G30970 | 78.873 | 426 | 88 | 1 | 1 | 424 | 5 | 430 | 0.0 | 720 |
| MS.gene006701.t1 | AT2G30970 | 78.873 | 426 | 88 | 1 | 1 | 424 | 5 | 430 | 0.0 | 720 |
| MS.gene006701.t1 | AT5G19550 | 50.503 | 398 | 195 | 1 | 23 | 418 | 1 | 398 | 2.46e-147 | 425 |
| MS.gene006701.t1 | AT5G11520 | 51.741 | 402 | 192 | 1 | 25 | 424 | 47 | 448 | 3.18e-147 | 426 |
| MS.gene006701.t1 | AT1G62800 | 47.619 | 399 | 209 | 0 | 23 | 421 | 1 | 399 | 7.73e-138 | 400 |
| MS.gene006701.t1 | AT1G62800 | 47.382 | 401 | 209 | 1 | 23 | 421 | 1 | 401 | 2.67e-136 | 397 |
| MS.gene006701.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 7.49e-134 | 392 |
| MS.gene006701.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 7.49e-134 | 392 |
| MS.gene006701.t1 | AT4G31990 | 46.135 | 414 | 220 | 3 | 6 | 417 | 33 | 445 | 1.71e-133 | 392 |
| MS.gene006701.t1 | AT4G31990 | 47.342 | 395 | 206 | 2 | 25 | 417 | 46 | 440 | 2.76e-133 | 390 |
| MS.gene006701.t1 | AT1G62800 | 47.493 | 339 | 176 | 1 | 23 | 359 | 1 | 339 | 2.03e-112 | 333 |
Find 112 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGATGGTCATTTATT+AGG | 0.163800 | 4.1:+26181922 | MS.gene006701:CDS |
| GCTGCAGTTCAGGCTTTATC+TGG | 0.203926 | 4.1:+26181038 | MS.gene006701:CDS |
| AACTACACTACGAGAGAATT+TGG | 0.231543 | 4.1:+26183008 | MS.gene006701:CDS |
| ACTCCAACATTAACTTTGTT+TGG | 0.243943 | 4.1:-26178872 | None:intergenic |
| AAATCCAACCCTTTAGATTC+AGG | 0.281836 | 4.1:-26181346 | None:intergenic |
| TGGGAACTGGTATATAGATT+TGG | 0.284181 | 4.1:-26181115 | None:intergenic |
| TGGACTGATGGATGACATTA+AGG | 0.291323 | 4.1:+26181372 | MS.gene006701:CDS |
| TAAACTTGACTCACATGAAT+TGG | 0.300528 | 4.1:-26179274 | None:intergenic |
| ACGAGAGAATTTGGAAAATC+TGG | 0.306043 | 4.1:+26183017 | MS.gene006701:CDS |
| TAGTAACGGTATGTCTTTAT+TGG | 0.320777 | 4.1:-26181319 | None:intergenic |
| GATTCATGTCTTCATGGTTC+AGG | 0.330358 | 4.1:+26178783 | MS.gene006701:CDS |
| AGCCACAACTTCTTCAAGTC+TGG | 0.343190 | 4.1:-26182415 | None:intergenic |
| ACCTAAGGCATCCAACTCTT+TGG | 0.349072 | 4.1:-26181984 | None:intergenic |
| TACAGCAATCCACCTCTTCA+TGG | 0.366324 | 4.1:+26182361 | MS.gene006701:CDS |
| GAAGCAGAGAGGAGAATTGC+AGG | 0.369047 | 4.1:+26179248 | MS.gene006701:CDS |
| GAGCTAGATTCATGTCTTCA+TGG | 0.382429 | 4.1:+26178777 | MS.gene006701:CDS |
| GTCAAACGATCAACCTGTTC+TGG | 0.382951 | 4.1:-26183341 | None:intergenic |
| AATTATAACAGGGCGCATAT+CGG | 0.387711 | 4.1:+26179186 | MS.gene006701:intron |
| TGACTCGTAATGGTCGTATA+AGG | 0.390208 | 4.1:+26183384 | MS.gene006701:CDS |
| ATTACAGCCACCATAACATT+TGG | 0.393881 | 4.1:+26181281 | MS.gene006701:intron |
| GGGAACTGGTATATAGATTT+GGG | 0.398341 | 4.1:-26181114 | None:intergenic |
| TAAACGAATAGCTGCAGTTC+AGG | 0.408353 | 4.1:+26181028 | MS.gene006701:CDS |
| TCAACGGACAATTTCTCAAC+CGG | 0.420413 | 4.1:+26178741 | MS.gene006701:CDS |
| CATATTTACATGACTCGTAA+TGG | 0.427237 | 4.1:+26183374 | MS.gene006701:CDS |
| CAGCATCTCTCCAAATGTTA+TGG | 0.427253 | 4.1:-26181291 | None:intergenic |
| GACTTGGACCAGGTGGGAAC+TGG | 0.436048 | 4.1:-26181128 | None:intergenic |
| CTTGTCGTTTCAACTGTCCT+TGG | 0.436753 | 4.1:+26182388 | MS.gene006701:CDS |
| CAGTATGGCTGGTCTTAATA+CGG | 0.443084 | 4.1:+26183515 | MS.gene006701:intron |
| GAATCACTGAAGCTGGCATA+TGG | 0.444094 | 4.1:+26180981 | MS.gene006701:CDS |
| ATTATAACAGGGCGCATATC+GGG | 0.453076 | 4.1:+26179187 | MS.gene006701:intron |
| CGAGAGAATTTGGAAAATCT+GGG | 0.454321 | 4.1:+26183018 | MS.gene006701:CDS |
| GTTATGGCAGACCGCATCAT+TGG | 0.454392 | 4.1:+26182979 | MS.gene006701:CDS |
| TGGTATATAGATTTGGGTGT+TGG | 0.456286 | 4.1:-26181108 | None:intergenic |
| TATGATTGTTTGCAGGCTAA+AGG | 0.462192 | 4.1:+26181817 | MS.gene006701:intron |
| TGGATTGCTGTACATGGGTC+TGG | 0.465606 | 4.1:-26182350 | None:intergenic |
| TGCATTCAACTGAACCTGAT+TGG | 0.467234 | 4.1:-26183067 | None:intergenic |
| GCTTGTGCTCACAATCCTAC+TGG | 0.469061 | 4.1:+26181669 | MS.gene006701:CDS |
| AATCCAACCCTTTAGATTCA+GGG | 0.470231 | 4.1:-26181345 | None:intergenic |
| TCTCTCCATTGTTCTTCTGA+AGG | 0.474653 | 4.1:-26181699 | None:intergenic |
| CAGCGGGATGACACCAGAAC+AGG | 0.474884 | 4.1:+26183328 | MS.gene006701:CDS |
| GTTCAGGCTTTATCTGGGAC+TGG | 0.478849 | 4.1:+26181044 | MS.gene006701:CDS |
| TACTATCACCCTGAATCTAA+AGG | 0.480649 | 4.1:+26181337 | MS.gene006701:CDS |
| ACTATCACCCTGAATCTAAA+GGG | 0.481415 | 4.1:+26181338 | MS.gene006701:CDS |
| GGTATATAGATTTGGGTGTT+GGG | 0.481546 | 4.1:-26181107 | None:intergenic |
| ACTCCGAGGATTGGATCCTT+AGG | 0.493438 | 4.1:-26178821 | None:intergenic |
| ATGGAATCACATAACCAATC+AGG | 0.493504 | 4.1:+26183053 | MS.gene006701:CDS |
| TAGCTCCTGTGACGGAGCTC+CGG | 0.500269 | 4.1:-26178760 | None:intergenic |
| GCTTCGGTAACTCCGAGGAT+TGG | 0.504812 | 4.1:-26178830 | None:intergenic |
| GAGCAGGGAGTATCTTCCCA+TGG | 0.505060 | 4.1:+26180935 | MS.gene006701:intron |
| CTGATCCGCAAGAAAAGCTT+CGG | 0.505274 | 4.1:-26178846 | None:intergenic |
| CTCAACCGGAGCTCCGTCAC+AGG | 0.508090 | 4.1:+26178755 | MS.gene006701:CDS |
| GAACATCGAACCAGCTCCTA+AGG | 0.511927 | 4.1:+26178805 | MS.gene006701:CDS |
| CTGCAGTTCAGGCTTTATCT+GGG | 0.514039 | 4.1:+26181039 | MS.gene006701:CDS |
| CATGGGTGGAAGCATACATA+TGG | 0.514364 | 4.1:+26180953 | MS.gene006701:CDS |
| TGTTATCATGACAGTATGGC+TGG | 0.514770 | 4.1:+26183504 | MS.gene006701:intron |
| CATAACATTTGGAGAGATGC+TGG | 0.515488 | 4.1:+26181292 | MS.gene006701:CDS |
| TACGGGCAACGTTGGATATG+TGG | 0.515504 | 4.1:+26183533 | MS.gene006701:CDS |
| CATATGTATGCTTCCACCCA+TGG | 0.520422 | 4.1:-26180952 | None:intergenic |
| AGGATTGGATCCTTAGGAGC+TGG | 0.523663 | 4.1:-26178815 | None:intergenic |
| TCATTTCCCTTTGTTTGACA+TGG | 0.525399 | 4.1:+26181840 | MS.gene006701:CDS |
| GGTTCAAGAATCACTGAAGC+TGG | 0.525800 | 4.1:+26180974 | MS.gene006701:CDS |
| ATAGAGATGTAAAAGCCATC+AGG | 0.526430 | 4.1:+26181893 | MS.gene006701:CDS |
| AGTCCAAACAAAGTTAATGT+TGG | 0.529361 | 4.1:+26178869 | MS.gene006701:CDS |
| AGCAGGGAGTATCTTCCCAT+GGG | 0.532326 | 4.1:+26180936 | MS.gene006701:intron |
| AAGAGGTGGATTGCTGTACA+TGG | 0.536615 | 4.1:-26182356 | None:intergenic |
| AGCAGAAAGAAAGAACCGTC+TGG | 0.539208 | 4.1:-26181642 | None:intergenic |
| ATCCAGACTTGAAGAAGTTG+TGG | 0.545968 | 4.1:+26182413 | MS.gene006701:CDS |
| TCACCCTGAATCTAAAGGGT+TGG | 0.547557 | 4.1:+26181342 | MS.gene006701:CDS |
| ATCTGGGGTCTCCATTGCCA+TGG | 0.550492 | 4.1:+26183034 | MS.gene006701:CDS |
| GAGAAGATTGCGAATCGCCA+TGG | 0.553263 | 4.1:-26178720 | None:intergenic |
| GGTATGCCATGTCAAACAAA+GGG | 0.556105 | 4.1:-26181846 | None:intergenic |
| AGAGATCTCTTCTCAAATGA+AGG | 0.556653 | 4.1:+26181719 | MS.gene006701:CDS |
| TTGGCATGTTCTGCTACAGC+GGG | 0.561910 | 4.1:+26183312 | MS.gene006701:CDS |
| GATTTCCACTAGCAAAACCT+TGG | 0.563864 | 4.1:-26181867 | None:intergenic |
| CTAACACATTCAAGAACCAC+AGG | 0.564027 | 4.1:-26179224 | None:intergenic |
| AGTATGGCTGGTCTTAATAC+GGG | 0.570434 | 4.1:+26183516 | MS.gene006701:intron |
| TCTGAAGGATCTACTCCAGT+AGG | 0.572848 | 4.1:-26181684 | None:intergenic |
| GGTCTTAATACGGGCAACGT+TGG | 0.573230 | 4.1:+26183525 | MS.gene006701:CDS |
| GGACTGTATGGCCAAAGAGT+TGG | 0.576952 | 4.1:+26181973 | MS.gene006701:CDS |
| TGGTATGCCATGTCAAACAA+AGG | 0.578691 | 4.1:-26181847 | None:intergenic |
| GCCAAAGAGTTGGATGCCTT+AGG | 0.584588 | 4.1:+26181983 | MS.gene006701:CDS |
| GTTATGTGATTCCATGGCAA+TGG | 0.584912 | 4.1:-26183045 | None:intergenic |
| GCTCCTAAGGATCCAATCCT+CGG | 0.593427 | 4.1:+26178818 | MS.gene006701:CDS |
| TAGATTCAGGGTGATAGTAA+CGG | 0.595480 | 4.1:-26181333 | None:intergenic |
| TCTATATACCAGTTCCCACC+TGG | 0.597915 | 4.1:+26181120 | MS.gene006701:CDS |
| CATCTCTCCAAATGTTATGG+TGG | 0.599838 | 4.1:-26181288 | None:intergenic |
| TGATTGGTTATGTGATTCCA+TGG | 0.602248 | 4.1:-26183051 | None:intergenic |
| GTTGTGGCTTAAAGAAGTCA+AGG | 0.603954 | 4.1:+26182429 | MS.gene006701:CDS |
| ATTGGCATGTTCTGCTACAG+CGG | 0.606237 | 4.1:+26183311 | MS.gene006701:CDS |
| TAGATCCTTCAGAAGAACAA+TGG | 0.608072 | 4.1:+26181694 | MS.gene006701:CDS |
| ATATGTATGCTTCCACCCAT+GGG | 0.618917 | 4.1:-26180951 | None:intergenic |
| GGCGCATATCGGGATGACAA+TGG | 0.620903 | 4.1:+26179197 | MS.gene006701:CDS |
| TTGTTTGACATGGCATACCA+AGG | 0.620915 | 4.1:+26181850 | MS.gene006701:CDS |
| CATGAATCTAGCTCCTGTGA+CGG | 0.621982 | 4.1:-26178768 | None:intergenic |
| ACGACAAGTGCTCCATGAAG+AGG | 0.624499 | 4.1:-26182373 | None:intergenic |
| AGATGATTCTGAGTTCATCA+AGG | 0.634967 | 4.1:+26181004 | MS.gene006701:CDS |
| ACAAGTGCTCCATGAAGAGG+TGG | 0.644744 | 4.1:-26182370 | None:intergenic |
| GAATACTGACTTGGACCAGG+TGG | 0.647698 | 4.1:-26181135 | None:intergenic |
| TAGTTCTCATTCCAATGATG+CGG | 0.649874 | 4.1:-26182990 | None:intergenic |
| ATTGAATACTGACTTGGACC+AGG | 0.652138 | 4.1:-26181138 | None:intergenic |
| AGGGAGTATCTTCCCATGGG+TGG | 0.652799 | 4.1:+26180939 | MS.gene006701:intron |
| AATACTGACTTGGACCAGGT+GGG | 0.664893 | 4.1:-26181134 | None:intergenic |
| GCGATTCGCAATCTTCTCAA+CGG | 0.664921 | 4.1:+26178725 | MS.gene006701:CDS |
| GGATGACAATGGAAAGCCTG+TGG | 0.668054 | 4.1:+26179208 | MS.gene006701:CDS |
| CGAAAATGAGAAACAAGCCG+TGG | 0.673088 | 4.1:+26182300 | MS.gene006701:CDS |
| GAGAGAATTTGGAAAATCTG+GGG | 0.676096 | 4.1:+26183019 | MS.gene006701:CDS |
| CTTACACAGAGTGCTCCAGA+CGG | 0.687623 | 4.1:+26181627 | MS.gene006701:intron |
| GAAAAGCTTCGGTAACTCCG+AGG | 0.698605 | 4.1:-26178835 | None:intergenic |
| AATGTGTTAGAGAAGCAGAG+AGG | 0.730380 | 4.1:+26179237 | MS.gene006701:CDS |
| AGAGGTGGATTGCTGTACAT+GGG | 0.738190 | 4.1:-26182355 | None:intergenic |
| TCTTCAAGTCTGGATCACCA+AGG | 0.760746 | 4.1:-26182405 | None:intergenic |
| TGTGGCTAACGCTATCAACG+AGG | 0.769825 | 4.1:+26183551 | MS.gene006701:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAACTTAATTTCTTA+TGG | + | chr4.1:26180764-26180783 | MS.gene006701:intron | 10.0% |
| !! | CAAAAAAAAAATATATTTGA+AGG | - | chr4.1:26179572-26179591 | None:intergenic | 10.0% |
| !! | TATATTAATATAGAATAACA+TGG | - | chr4.1:26182831-26182850 | None:intergenic | 10.0% |
| !!! | AAATAAATATTTGTTATTTG+TGG | - | chr4.1:26179760-26179779 | None:intergenic | 10.0% |
| !!! | AAATATATAATTTCTACTTT+TGG | + | chr4.1:26179826-26179845 | MS.gene006701:intron | 10.0% |
| !!! | CAAGTTTATTTTTTTTTTTT+TGG | + | chr4.1:26179289-26179308 | MS.gene006701:intron | 10.0% |
| !!! | TTTTTTCAACTTTATTTAAT+GGG | + | chr4.1:26179909-26179928 | MS.gene006701:intron | 10.0% |
| !! | TGATTTACTAAATTTAAGAA+TGG | - | chr4.1:26182879-26182898 | None:intergenic | 15.0% |
| !! | TTTCAAAGATAAATATTTGT+GGG | + | chr4.1:26180165-26180184 | MS.gene006701:intron | 15.0% |
| !!! | AAACTTTGAAATATTTCTTT+TGG | - | chr4.1:26180333-26180352 | None:intergenic | 15.0% |
| !!! | GTTTTTTCAACTTTATTTAA+TGG | + | chr4.1:26179908-26179927 | MS.gene006701:intron | 15.0% |
| !!! | TTAATATCATTTTAAAACAG+TGG | - | chr4.1:26180727-26180746 | None:intergenic | 15.0% |
| !!! | TTATACCATAAAGTTTTTTA+GGG | - | chr4.1:26182536-26182555 | None:intergenic | 15.0% |
| !!! | TTTATACCATAAAGTTTTTT+AGG | - | chr4.1:26182537-26182556 | None:intergenic | 15.0% |
| !! | AATAATTAAAGTGAGACTAA+TGG | - | chr4.1:26181563-26181582 | None:intergenic | 20.0% |
| !! | AATATATAAGAAAAAGTCTG+AGG | - | chr4.1:26182736-26182755 | None:intergenic | 20.0% |
| !! | AATGATATGTATGTAAACAT+TGG | + | chr4.1:26182165-26182184 | MS.gene006701:intron | 20.0% |
| !! | AGTAGTTGTTGTAATAATAA+TGG | + | chr4.1:26179375-26179394 | MS.gene006701:intron | 20.0% |
| !! | ATTACAAGATCAATAATTCT+AGG | - | chr4.1:26181254-26181273 | None:intergenic | 20.0% |
| !! | CAATCATATGCAAAAAATAT+GGG | + | chr4.1:26181952-26181971 | MS.gene006701:CDS | 20.0% |
| !! | CTAATACTAATCAATAAGAA+TGG | - | chr4.1:26182017-26182036 | None:intergenic | 20.0% |
| !! | CTTTAATTAATCTACAAGAA+TGG | + | chr4.1:26180635-26180654 | MS.gene006701:intron | 20.0% |
| !! | GCAAACCAATAAAAATTTAA+GGG | - | chr4.1:26180199-26180218 | None:intergenic | 20.0% |
| !! | GTTTCAAAGATAAATATTTG+TGG | + | chr4.1:26180164-26180183 | MS.gene006701:intron | 20.0% |
| !! | TAAGAAATAACCAATTTAAG+AGG | - | chr4.1:26181611-26181630 | None:intergenic | 20.0% |
| !! | TCAATCATATGCAAAAAATA+TGG | + | chr4.1:26181951-26181970 | MS.gene006701:CDS | 20.0% |
| !! | TGGATGAATTTCATTTATTA+TGG | - | chr4.1:26182693-26182712 | None:intergenic | 20.0% |
| !! | TGTCTTCTTAAATTATCATT+TGG | - | chr4.1:26182856-26182875 | None:intergenic | 20.0% |
| !! | TTCAAAGATAAATATTTGTG+GGG | + | chr4.1:26180166-26180185 | MS.gene006701:intron | 20.0% |
| !!! | AGTAATTTGTTTCTTTCTTT+AGG | + | chr4.1:26180091-26180110 | MS.gene006701:intron | 20.0% |
| !!! | CATTCTTATTGATTAGTATT+AGG | + | chr4.1:26182015-26182034 | MS.gene006701:intron | 20.0% |
| !!! | TCTCACTTTTAGAAATATTT+TGG | - | chr4.1:26180424-26180443 | None:intergenic | 20.0% |
| !!! | TTGATTTGCAAATTATAACA+GGG | + | chr4.1:26179176-26179195 | MS.gene006701:intron | 20.0% |
| !!! | TTTGATTTGCAAATTATAAC+AGG | + | chr4.1:26179175-26179194 | MS.gene006701:intron | 20.0% |
| !!! | TTTTCTTTGAGTTAACTTAA+CGG | - | chr4.1:26179866-26179885 | None:intergenic | 20.0% |
| !!! | TTTTTCCCTAAAAAACTTTA+TGG | + | chr4.1:26182528-26182547 | MS.gene006701:intron | 20.0% |
| ! | AAATCAATGGCAGTATTTAA+AGG | - | chr4.1:26181173-26181192 | None:intergenic | 25.0% |
| ! | AACCATAAAAATAAGAGAGA+AGG | - | chr4.1:26183157-26183176 | None:intergenic | 25.0% |
| ! | AACTCATAGTATAAGAGAAA+TGG | - | chr4.1:26183444-26183463 | None:intergenic | 25.0% |
| ! | ACCATAAAAATAAGAGAGAA+GGG | - | chr4.1:26183156-26183175 | None:intergenic | 25.0% |
| ! | AGAAAATGAACTTACATAGA+TGG | + | chr4.1:26182945-26182964 | MS.gene006701:intron | 25.0% |
| ! | AGCATCTAACTTTAGTTAAA+AGG | + | chr4.1:26179670-26179689 | MS.gene006701:intron | 25.0% |
| ! | ATTTGTGGAATTCTTAACAT+TGG | - | chr4.1:26179745-26179764 | None:intergenic | 25.0% |
| ! | CAATAAAAATTTAAGGGATG+CGG | - | chr4.1:26180193-26180212 | None:intergenic | 25.0% |
| ! | CAATGCTCAATTAACATAAT+TGG | + | chr4.1:26182771-26182790 | MS.gene006701:intron | 25.0% |
| ! | CATGTTAAAAGATAGAGTTA+TGG | - | chr4.1:26182112-26182131 | None:intergenic | 25.0% |
| ! | CGCAAACCAATAAAAATTTA+AGG | - | chr4.1:26180200-26180219 | None:intergenic | 25.0% |
| ! | CTTTCTGTTAGAAAAAAGTA+CGG | + | chr4.1:26180382-26180401 | MS.gene006701:intron | 25.0% |
| ! | TATATGTTATCATGACAGTA+TGG | + | chr4.1:26183500-26183519 | MS.gene006701:intron | 25.0% |
| ! | TTTGATATTTCGTAGATATC+TGG | + | chr4.1:26181228-26181247 | MS.gene006701:intron | 25.0% |
| !! | AAAAGTACGGATAATTAATC+AGG | + | chr4.1:26180395-26180414 | MS.gene006701:intron | 25.0% |
| !! | CAAAGTGTTAAAAACTTAGT+TGG | + | chr4.1:26183250-26183269 | MS.gene006701:intron | 25.0% |
| !! | TGGTTAATGCTAACATTTTT+AGG | + | chr4.1:26179309-26179328 | MS.gene006701:intron | 25.0% |
| !! | TTTCTTTCTTTAGGTGTTTT+GGG | + | chr4.1:26180100-26180119 | MS.gene006701:intron | 25.0% |
| !!! | CTCTTATTTTTATGGTTACT+TGG | + | chr4.1:26183160-26183179 | MS.gene006701:intron | 25.0% |
| !!! | TAATTGGTTTTGTAGAATGT+GGG | + | chr4.1:26180291-26180310 | MS.gene006701:intron | 25.0% |
| !!! | TTTTTTAGGGAAAAAAGCAA+AGG | - | chr4.1:26182523-26182542 | None:intergenic | 25.0% |
| AATGAAATTCATCCAATCCT+AGG | + | chr4.1:26182698-26182717 | MS.gene006701:intron | 30.0% | |
| ACATTGGACAAATGTTAACA+TGG | - | chr4.1:26179729-26179748 | None:intergenic | 30.0% | |
| ACTCCAACATTAACTTTGTT+TGG | - | chr4.1:26178875-26178894 | None:intergenic | 30.0% | |
| ACTCTTCTTACCTCTTAAAT+TGG | + | chr4.1:26181598-26181617 | MS.gene006701:intron | 30.0% | |
| AGTCATAAGTGTTATCTTTG+CGG | - | chr4.1:26182256-26182275 | None:intergenic | 30.0% | |
| AGTCCAAACAAAGTTAATGT+TGG | + | chr4.1:26178869-26178888 | MS.gene006701:CDS | 30.0% | |
| ATCATCAACAAAAATCCTGA+TGG | - | chr4.1:26181911-26181930 | None:intergenic | 30.0% | |
| ATGACCGAAATTCATAGTAA+CGG | + | chr4.1:26180266-26180285 | MS.gene006701:intron | 30.0% | |
| CATATTTACATGACTCGTAA+TGG | + | chr4.1:26183374-26183393 | MS.gene006701:CDS | 30.0% | |
| CCATAAAAATAAGAGAGAAG+GGG | - | chr4.1:26183155-26183174 | None:intergenic | 30.0% | |
| GCACAGAAAATAAGAAAAAG+TGG | - | chr4.1:26183104-26183123 | None:intergenic | 30.0% | |
| GCAGTATTTAAAGGAAGATT+TGG | - | chr4.1:26181164-26181183 | None:intergenic | 30.0% | |
| GCATACTGCAGAATTATATA+TGG | - | chr4.1:26182562-26182581 | None:intergenic | 30.0% | |
| GTAGTGTAAAAAACTGTTTC+AGG | - | chr4.1:26180869-26180888 | None:intergenic | 30.0% | |
| TAAACTTGACTCACATGAAT+TGG | - | chr4.1:26179277-26179296 | None:intergenic | 30.0% | |
| TACTCCGTTACTATGAATTT+CGG | - | chr4.1:26180273-26180292 | None:intergenic | 30.0% | |
| TAGTAACGGTATGTCTTTAT+TGG | - | chr4.1:26181322-26181341 | None:intergenic | 30.0% | |
| TCTAAAAGTGAGAAGAAAAC+TGG | + | chr4.1:26180431-26180450 | MS.gene006701:intron | 30.0% | |
| TCTCTTATACTATGAGTTCT+TGG | + | chr4.1:26183446-26183465 | MS.gene006701:intron | 30.0% | |
| TCTTCTCAAATGAAGGTTAA+AGG | + | chr4.1:26181726-26181745 | MS.gene006701:intron | 30.0% | |
| TTACAGCTTATAGCACAAAT+AGG | + | chr4.1:26180476-26180495 | MS.gene006701:intron | 30.0% | |
| TTCTGTAGACTCAAAATCAA+TGG | - | chr4.1:26181186-26181205 | None:intergenic | 30.0% | |
| TTTCAGGAGAATGTTACTAA+GGG | - | chr4.1:26180853-26180872 | None:intergenic | 30.0% | |
| ! | ATTCATAGTAACGGAGTAAT+TGG | + | chr4.1:26180275-26180294 | MS.gene006701:intron | 30.0% |
| ! | ATTTGGATTGAATACTGACT+TGG | - | chr4.1:26181147-26181166 | None:intergenic | 30.0% |
| ! | CGCATCCCTTAAATTTTTAT+TGG | + | chr4.1:26180191-26180210 | MS.gene006701:intron | 30.0% |
| ! | GTTTCTTTCTTTAGGTGTTT+TGG | + | chr4.1:26180099-26180118 | MS.gene006701:intron | 30.0% |
| ! | TTTAAAACAGTGGCGATAAA+AGG | - | chr4.1:26180717-26180736 | None:intergenic | 30.0% |
| !! | ATCAGGATTTTTGTTGATGA+TGG | + | chr4.1:26181910-26181929 | MS.gene006701:CDS | 30.0% |
| !! | GTTGATGATGGTCATTTATT+AGG | + | chr4.1:26181922-26181941 | MS.gene006701:CDS | 30.0% |
| !!! | AGTATGCTATTTTTCTAAGG+TGG | + | chr4.1:26182575-26182594 | MS.gene006701:intron | 30.0% |
| !!! | CGTACTTTTTTCTAACAGAA+AGG | - | chr4.1:26180384-26180403 | None:intergenic | 30.0% |
| !!! | GTAATTGGTTTTGTAGAATG+TGG | + | chr4.1:26180290-26180309 | MS.gene006701:intron | 30.0% |
| !!! | TGCAGTATGCTATTTTTCTA+AGG | + | chr4.1:26182572-26182591 | MS.gene006701:intron | 30.0% |
| !!! | TTTCATGTGCCATTTTTTTG+TGG | + | chr4.1:26179943-26179962 | MS.gene006701:intron | 30.0% |
| AAAAGCAGCAGCAATAAAAC+AGG | - | chr4.1:26180140-26180159 | None:intergenic | 35.0% | |
| AAATCCAACCCTTTAGATTC+AGG | - | chr4.1:26181349-26181368 | None:intergenic | 35.0% | |
| AACTACACTACGAGAGAATT+TGG | + | chr4.1:26183008-26183027 | MS.gene006701:CDS | 35.0% | |
| AAGAAGATGCTTAGTAGGTT+AGG | + | chr4.1:26180237-26180256 | MS.gene006701:intron | 35.0% | |
| AAGAATGGTATGAGATTGGA+CGG | + | chr4.1:26180650-26180669 | MS.gene006701:intron | 35.0% | |
| AAGAATGGTCTACTTACCTA+AGG | - | chr4.1:26182002-26182021 | None:intergenic | 35.0% | |
| AATCCAACCCTTTAGATTCA+GGG | - | chr4.1:26181348-26181367 | None:intergenic | 35.0% | |
| AATTATAACAGGGCGCATAT+CGG | + | chr4.1:26179186-26179205 | MS.gene006701:intron | 35.0% | |
| ACGAGAGAATTTGGAAAATC+TGG | + | chr4.1:26183017-26183036 | MS.gene006701:CDS | 35.0% | |
| ACGGTTAAGATCAATTACTG+CGG | + | chr4.1:26180669-26180688 | MS.gene006701:intron | 35.0% | |
| ACGTGATCACCACAAAAAAA+TGG | - | chr4.1:26179955-26179974 | None:intergenic | 35.0% | |
| ACTATCACCCTGAATCTAAA+GGG | + | chr4.1:26181338-26181357 | MS.gene006701:CDS | 35.0% | |
| AGAGATCTCTTCTCAAATGA+AGG | + | chr4.1:26181719-26181738 | MS.gene006701:CDS | 35.0% | |
| AGATGATTCTGAGTTCATCA+AGG | + | chr4.1:26181004-26181023 | MS.gene006701:CDS | 35.0% | |
| AGTTTGACATTGTAACCTCT+AGG | + | chr4.1:26181498-26181517 | MS.gene006701:intron | 35.0% | |
| ATACTATGAGTTCTTGGAGA+TGG | + | chr4.1:26183452-26183471 | MS.gene006701:intron | 35.0% | |
| ATAGAGATGTAAAAGCCATC+AGG | + | chr4.1:26181893-26181912 | MS.gene006701:CDS | 35.0% | |
| ATGCTTAGTAGGTTAGGTAT+TGG | + | chr4.1:26180243-26180262 | MS.gene006701:intron | 35.0% | |
| ATGGAATCACATAACCAATC+AGG | + | chr4.1:26183053-26183072 | MS.gene006701:CDS | 35.0% | |
| ATTACAGCCACCATAACATT+TGG | + | chr4.1:26181281-26181300 | MS.gene006701:intron | 35.0% | |
| CGAGAGAATTTGGAAAATCT+GGG | + | chr4.1:26183018-26183037 | MS.gene006701:CDS | 35.0% | |
| CGCACATAGAAACTTTAGTT+GGG | + | chr4.1:26179647-26179666 | MS.gene006701:intron | 35.0% | |
| CTACAAGAATGGTATGAGAT+TGG | + | chr4.1:26180646-26180665 | MS.gene006701:intron | 35.0% | |
| CTAGAAAGAAGATGCTTAGT+AGG | + | chr4.1:26180232-26180251 | MS.gene006701:intron | 35.0% | |
| CTGTTAATCATTAGTGACTG+AGG | + | chr4.1:26182626-26182645 | MS.gene006701:intron | 35.0% | |
| CTGTTACTATTTGTGCAGAT+TGG | + | chr4.1:26183293-26183312 | MS.gene006701:intron | 35.0% | |
| GAGAGAATTTGGAAAATCTG+GGG | + | chr4.1:26183019-26183038 | MS.gene006701:CDS | 35.0% | |
| GAGTCATGTATAAAGTGTGT+CGG | - | chr4.1:26181425-26181444 | None:intergenic | 35.0% | |
| GCAAAAAATATGGGACTGTA+TGG | + | chr4.1:26181961-26181980 | MS.gene006701:CDS | 35.0% | |
| GCATGAATAAGTTGTAGCAA+CGG | + | chr4.1:26182920-26182939 | MS.gene006701:intron | 35.0% | |
| GGGAACTGGTATATAGATTT+GGG | - | chr4.1:26181117-26181136 | None:intergenic | 35.0% | |
| GGTACAAATGATAAGCGATT+TGG | + | chr4.1:26179509-26179528 | MS.gene006701:intron | 35.0% | |
| GGTATATAGATTTGGGTGTT+GGG | - | chr4.1:26181110-26181129 | None:intergenic | 35.0% | |
| GTTTCAGGAGAATGTTACTA+AGG | - | chr4.1:26180854-26180873 | None:intergenic | 35.0% | |
| GTTTGACATTGTAACCTCTA+GGG | + | chr4.1:26181499-26181518 | MS.gene006701:intron | 35.0% | |
| TACATAGATGGCTTCTTTAC+AGG | + | chr4.1:26182957-26182976 | MS.gene006701:intron | 35.0% | |
| TACTATCACCCTGAATCTAA+AGG | + | chr4.1:26181337-26181356 | MS.gene006701:CDS | 35.0% | |
| TACTATGAGTTCTTGGAGAT+GGG | + | chr4.1:26183453-26183472 | MS.gene006701:intron | 35.0% | |
| TAGATCCTTCAGAAGAACAA+TGG | + | chr4.1:26181694-26181713 | MS.gene006701:CDS | 35.0% | |
| TAGATTCAGGGTGATAGTAA+CGG | - | chr4.1:26181336-26181355 | None:intergenic | 35.0% | |
| TAGTTCTCATTCCAATGATG+CGG | - | chr4.1:26182993-26183012 | None:intergenic | 35.0% | |
| TATGATTGTTTGCAGGCTAA+AGG | + | chr4.1:26181817-26181836 | MS.gene006701:intron | 35.0% | |
| TCATTGCTATGATTGTTTGC+AGG | + | chr4.1:26181810-26181829 | MS.gene006701:intron | 35.0% | |
| TGGGAACTGGTATATAGATT+TGG | - | chr4.1:26181118-26181137 | None:intergenic | 35.0% | |
| TGGTATATAGATTTGGGTGT+TGG | - | chr4.1:26181111-26181130 | None:intergenic | 35.0% | |
| TTAGTATTAGGCCAAAGAGT+TGG | + | chr4.1:26182027-26182046 | MS.gene006701:intron | 35.0% | |
| ! | ATGGCTTTTACATCTCTATC+TGG | - | chr4.1:26181892-26181911 | None:intergenic | 35.0% |
| ! | ATTTTACAACCGTCTTTGAC+GGG | - | chr4.1:26181538-26181557 | None:intergenic | 35.0% |
| ! | CATTTTACAACCGTCTTTGA+CGG | - | chr4.1:26181539-26181558 | None:intergenic | 35.0% |
| ! | GGGGAGTAAAACTTTTATAG+AGG | - | chr4.1:26182489-26182508 | None:intergenic | 35.0% |
| ! | TCATTTCCCTTTGTTTGACA+TGG | + | chr4.1:26181840-26181859 | MS.gene006701:CDS | 35.0% |
| ! | TCTAAAGGGTTGGATTTTTC+TGG | + | chr4.1:26181352-26181371 | MS.gene006701:CDS | 35.0% |
| ! | TGATTGGTTATGTGATTCCA+TGG | - | chr4.1:26183054-26183073 | None:intergenic | 35.0% |
| !! | CAATTGACTTTTTACAGCCA+CGG | - | chr4.1:26182320-26182339 | None:intergenic | 35.0% |
| !! | CATCTTCTTTCTAGCTAGTT+TGG | - | chr4.1:26180226-26180245 | None:intergenic | 35.0% |
| !! | CTATCTACTTTTGGTCTATG+AGG | + | chr4.1:26181457-26181476 | MS.gene006701:intron | 35.0% |
| !! | GCTGTGTTACTATCTACTTT+TGG | + | chr4.1:26181448-26181467 | MS.gene006701:intron | 35.0% |
| !! | TATTAGAAGCTTGTTGACCA+AGG | - | chr4.1:26180826-26180845 | None:intergenic | 35.0% |
| !!! | AGTTTGCTTTTTTGGTACGT+TGG | + | chr4.1:26179988-26180007 | MS.gene006701:intron | 35.0% |
| !!! | CCCCTTCTCTCTTATTTTTA+TGG | + | chr4.1:26183152-26183171 | MS.gene006701:intron | 35.0% |
| !!! | GCTATTTTTCTAAGGTGGAA+TGG | + | chr4.1:26182580-26182599 | MS.gene006701:intron | 35.0% |
| AAAAAAGCAAACTCAGCTGG+TGG | - | chr4.1:26179981-26180000 | None:intergenic | 40.0% | |
| AAAAAAGCAAAGGCTGTGAG+AGG | - | chr4.1:26182513-26182532 | None:intergenic | 40.0% | |
| AAGTTCTGTAAACCAGCTCA+AGG | - | chr4.1:26182209-26182228 | None:intergenic | 40.0% | |
| AATGTGTTAGAGAAGCAGAG+AGG | + | chr4.1:26179237-26179256 | MS.gene006701:CDS | 40.0% | |
| ACCAAAAAAGCAAACTCAGC+TGG | - | chr4.1:26179984-26180003 | None:intergenic | 40.0% | |
| ACCGTTTCAAATGTTTGAGC+AGG | + | chr4.1:26180919-26180938 | MS.gene006701:intron | 40.0% | |
| AGAACACTGCAACAACAAGT+AGG | - | chr4.1:26180027-26180046 | None:intergenic | 40.0% | |
| AGTAGTTCCAACCAACTCTT+TGG | - | chr4.1:26182041-26182060 | None:intergenic | 40.0% | |
| ATATGTATGCTTCCACCCAT+GGG | - | chr4.1:26180954-26180973 | None:intergenic | 40.0% | |
| ATCATTAGTGACTGAGGCTA+TGG | + | chr4.1:26182632-26182651 | MS.gene006701:intron | 40.0% | |
| ATCCAGACTTGAAGAAGTTG+TGG | + | chr4.1:26182413-26182432 | MS.gene006701:CDS | 40.0% | |
| ATTATAACAGGGCGCATATC+GGG | + | chr4.1:26179187-26179206 | MS.gene006701:intron | 40.0% | |
| CAGCATCTCTCCAAATGTTA+TGG | - | chr4.1:26181294-26181313 | None:intergenic | 40.0% | |
| CATAACATTTGGAGAGATGC+TGG | + | chr4.1:26181292-26181311 | MS.gene006701:CDS | 40.0% | |
| CATCTCTCCAAATGTTATGG+TGG | - | chr4.1:26181291-26181310 | None:intergenic | 40.0% | |
| CCCTGCTCAAACATTTGAAA+CGG | - | chr4.1:26180923-26180942 | None:intergenic | 40.0% | |
| CCGTTTCAAATGTTTGAGCA+GGG | + | chr4.1:26180920-26180939 | MS.gene006701:intron | 40.0% | |
| CTAACACATTCAAGAACCAC+AGG | - | chr4.1:26179227-26179246 | None:intergenic | 40.0% | |
| GAGCTAGATTCATGTCTTCA+TGG | + | chr4.1:26178777-26178796 | MS.gene006701:CDS | 40.0% | |
| GATGGCTTCTTTACAGGTTA+TGG | + | chr4.1:26182963-26182982 | MS.gene006701:intron | 40.0% | |
| GATTCATGTCTTCATGGTTC+AGG | + | chr4.1:26178783-26178802 | MS.gene006701:CDS | 40.0% | |
| GATTTCCACTAGCAAAACCT+TGG | - | chr4.1:26181870-26181889 | None:intergenic | 40.0% | |
| GCGCACATAGAAACTTTAGT+TGG | + | chr4.1:26179646-26179665 | MS.gene006701:intron | 40.0% | |
| GGTATGCCATGTCAAACAAA+GGG | - | chr4.1:26181849-26181868 | None:intergenic | 40.0% | |
| GTGCTTATTGTAGTTGCTTG+AGG | + | chr4.1:26183120-26183139 | MS.gene006701:intron | 40.0% | |
| GTTAACTTAACGGCACATGT+TGG | - | chr4.1:26179856-26179875 | None:intergenic | 40.0% | |
| GTTATGTGATTCCATGGCAA+TGG | - | chr4.1:26183048-26183067 | None:intergenic | 40.0% | |
| GTTGTGGCTTAAAGAAGTCA+AGG | + | chr4.1:26182429-26182448 | MS.gene006701:CDS | 40.0% | |
| TAAACGAATAGCTGCAGTTC+AGG | + | chr4.1:26181028-26181047 | MS.gene006701:CDS | 40.0% | |
| TACTTGGAGACCAAGTATCT+TGG | + | chr4.1:26183176-26183195 | MS.gene006701:intron | 40.0% | |
| TCAACGGACAATTTCTCAAC+CGG | + | chr4.1:26178741-26178760 | MS.gene006701:CDS | 40.0% | |
| TCTCTCCATTGTTCTTCTGA+AGG | - | chr4.1:26181702-26181721 | None:intergenic | 40.0% | |
| TGACTCGTAATGGTCGTATA+AGG | + | chr4.1:26183384-26183403 | MS.gene006701:CDS | 40.0% | |
| TGCATTCAACTGAACCTGAT+TGG | - | chr4.1:26183070-26183089 | None:intergenic | 40.0% | |
| TGCGGCACATATTTAATGCT+CGG | + | chr4.1:26180687-26180706 | MS.gene006701:intron | 40.0% | |
| TGGTATGCCATGTCAAACAA+AGG | - | chr4.1:26181850-26181869 | None:intergenic | 40.0% | |
| TGTTATCATGACAGTATGGC+TGG | + | chr4.1:26183504-26183523 | MS.gene006701:intron | 40.0% | |
| TTGTAGAATGTGGGACTTGT+TGG | + | chr4.1:26180300-26180319 | MS.gene006701:intron | 40.0% | |
| TTGTTTGACATGGCATACCA+AGG | + | chr4.1:26181850-26181869 | MS.gene006701:CDS | 40.0% | |
| ! | AGAACAGTGTTGCTCTGTTA+TGG | - | chr4.1:26179014-26179033 | None:intergenic | 40.0% |
| ! | AGTTACCGAAGCTTTTCTTG+CGG | + | chr4.1:26178841-26178860 | MS.gene006701:CDS | 40.0% |
| ! | GAGAAGAAAACTGGTCTGTT+TGG | + | chr4.1:26180440-26180459 | MS.gene006701:intron | 40.0% |
| ! | GTTGGATTTTTCTGGACTGA+TGG | + | chr4.1:26181360-26181379 | MS.gene006701:CDS | 40.0% |
| ! | TATTAGGCCAAAGAGTTGGT+TGG | + | chr4.1:26182031-26182050 | MS.gene006701:intron | 40.0% |
| ! | TGAGCTGGTTTACAGAACTT+TGG | + | chr4.1:26182209-26182228 | MS.gene006701:intron | 40.0% |
| ! | TGGACTGATGGATGACATTA+AGG | + | chr4.1:26181372-26181391 | MS.gene006701:CDS | 40.0% |
| ! | TTTTCGCAAAGTAAGCTGCA+AGG | - | chr4.1:26182286-26182305 | None:intergenic | 40.0% |
| !! | AGTATGGCTGGTCTTAATAC+GGG | + | chr4.1:26183516-26183535 | MS.gene006701:intron | 40.0% |
| !! | ATTGAATACTGACTTGGACC+AGG | - | chr4.1:26181141-26181160 | None:intergenic | 40.0% |
| !! | CAGTATGGCTGGTCTTAATA+CGG | + | chr4.1:26183515-26183534 | MS.gene006701:intron | 40.0% |
| !! | TTTAGTTTGAAGCCTTGAGC+TGG | + | chr4.1:26182194-26182213 | MS.gene006701:intron | 40.0% |
| !!! | ACCAGCTGAGTTTGCTTTTT+TGG | + | chr4.1:26179980-26179999 | MS.gene006701:intron | 40.0% |
| !!! | AGGTGTTTTGGGATGATGTA+GGG | + | chr4.1:26180111-26180130 | MS.gene006701:intron | 40.0% |
| !!! | TAGGTGTTTTGGGATGATGT+AGG | + | chr4.1:26180110-26180129 | MS.gene006701:intron | 40.0% |
| AAGTATCTTGGTAGGGGAGA+GGG | + | chr4.1:26183188-26183207 | MS.gene006701:intron | 45.0% | |
| AGCAGAAAGAAAGAACCGTC+TGG | - | chr4.1:26181645-26181664 | None:intergenic | 45.0% | |
| AGCCACAACTTCTTCAAGTC+TGG | - | chr4.1:26182418-26182437 | None:intergenic | 45.0% | |
| AGGTCAAATCCCGTCAAAGA+CGG | + | chr4.1:26181526-26181545 | MS.gene006701:intron | 45.0% | |
| ATTGGCATGTTCTGCTACAG+CGG | + | chr4.1:26183311-26183330 | MS.gene006701:CDS | 45.0% | |
| CAAGGTAGGTCTGAATCTGA+TGG | - | chr4.1:26180808-26180827 | None:intergenic | 45.0% | |
| CATATGTATGCTTCCACCCA+TGG | - | chr4.1:26180955-26180974 | None:intergenic | 45.0% | |
| CATCAGATTCAGACCTACCT+TGG | + | chr4.1:26180806-26180825 | MS.gene006701:intron | 45.0% | |
| CGAAAATGAGAAACAAGCCG+TGG | + | chr4.1:26182300-26182319 | MS.gene006701:CDS | 45.0% | |
| CTGATCCGCAAGAAAAGCTT+CGG | - | chr4.1:26178849-26178868 | None:intergenic | 45.0% | |
| GAATCACTGAAGCTGGCATA+TGG | + | chr4.1:26180981-26181000 | MS.gene006701:CDS | 45.0% | |
| GAGACCAAGTATCTTGGTAG+GGG | + | chr4.1:26183182-26183201 | MS.gene006701:intron | 45.0% | |
| GCGATTCGCAATCTTCTCAA+CGG | + | chr4.1:26178725-26178744 | MS.gene006701:CDS | 45.0% | |
| GGAGACCAAGTATCTTGGTA+GGG | + | chr4.1:26183181-26183200 | MS.gene006701:intron | 45.0% | |
| GGTTCAAGAATCACTGAAGC+TGG | + | chr4.1:26180974-26180993 | MS.gene006701:CDS | 45.0% | |
| GTCAAACGATCAACCTGTTC+TGG | - | chr4.1:26183344-26183363 | None:intergenic | 45.0% | |
| TACAGCAATCCACCTCTTCA+TGG | + | chr4.1:26182361-26182380 | MS.gene006701:CDS | 45.0% | |
| TCACCCTGAATCTAAAGGGT+TGG | + | chr4.1:26181342-26181361 | MS.gene006701:CDS | 45.0% | |
| TCTATATACCAGTTCCCACC+TGG | + | chr4.1:26181120-26181139 | MS.gene006701:CDS | 45.0% | |
| TCTATGTGCGCACGAGATAA+AGG | - | chr4.1:26179637-26179656 | None:intergenic | 45.0% | |
| TCTGAAGGATCTACTCCAGT+AGG | - | chr4.1:26181687-26181706 | None:intergenic | 45.0% | |
| TCTTCAAGTCTGGATCACCA+AGG | - | chr4.1:26182408-26182427 | None:intergenic | 45.0% | |
| TGGAGACCAAGTATCTTGGT+AGG | + | chr4.1:26183180-26183199 | MS.gene006701:intron | 45.0% | |
| TTACTACACCACACAGAGCA+AGG | - | chr4.1:26180076-26180095 | None:intergenic | 45.0% | |
| ! | ACCTAAGGCATCCAACTCTT+TGG | - | chr4.1:26181987-26182006 | None:intergenic | 45.0% |
| ! | ATTGTAACCTCTAGGGACGA+AGG | + | chr4.1:26181506-26181525 | MS.gene006701:intron | 45.0% |
| ! | CATGAATCTAGCTCCTGTGA+CGG | - | chr4.1:26178771-26178790 | None:intergenic | 45.0% |
| ! | CATGGGTGGAAGCATACATA+TGG | + | chr4.1:26180953-26180972 | MS.gene006701:CDS | 45.0% |
| ! | CTGCAGTTCAGGCTTTATCT+GGG | + | chr4.1:26181039-26181058 | MS.gene006701:CDS | 45.0% |
| ! | CTTGTCGTTTCAACTGTCCT+TGG | + | chr4.1:26182388-26182407 | MS.gene006701:CDS | 45.0% |
| ! | GCATACCAAGGTTTTGCTAG+TGG | + | chr4.1:26181862-26181881 | MS.gene006701:CDS | 45.0% |
| !! | AAGAGGTGGATTGCTGTACA+TGG | - | chr4.1:26182359-26182378 | None:intergenic | 45.0% |
| !! | AATACTGACTTGGACCAGGT+GGG | - | chr4.1:26181137-26181156 | None:intergenic | 45.0% |
| !! | AGAAGCTTGTTGACCAAGGT+AGG | - | chr4.1:26180822-26180841 | None:intergenic | 45.0% |
| !! | AGAGGTGGATTGCTGTACAT+GGG | - | chr4.1:26182358-26182377 | None:intergenic | 45.0% |
| !!! | ATTTTTATTTAATTATAGAT+TGG | + | chr4.1:26179488-26179507 | MS.gene006701:intron | 5.0% |
| AAAGCAAAGGCTGTGAGAGG+TGG | - | chr4.1:26182510-26182529 | None:intergenic | 50.0% | |
| AAGCAAAGGCTGTGAGAGGT+GGG | - | chr4.1:26182509-26182528 | None:intergenic | 50.0% | |
| ACAAGTGCTCCATGAAGAGG+TGG | - | chr4.1:26182373-26182392 | None:intergenic | 50.0% | |
| ACGACAAGTGCTCCATGAAG+AGG | - | chr4.1:26182376-26182395 | None:intergenic | 50.0% | |
| ACTCCGAGGATTGGATCCTT+AGG | - | chr4.1:26178824-26178843 | None:intergenic | 50.0% | |
| AGGATTGGATCCTTAGGAGC+TGG | - | chr4.1:26178818-26178837 | None:intergenic | 50.0% | |
| CAAGTATCTTGGTAGGGGAG+AGG | + | chr4.1:26183187-26183206 | MS.gene006701:intron | 50.0% | |
| CTCTCCCCTACCAAGATACT+TGG | - | chr4.1:26183189-26183208 | None:intergenic | 50.0% | |
| GAAAAGCTTCGGTAACTCCG+AGG | - | chr4.1:26178838-26178857 | None:intergenic | 50.0% | |
| GAACATCGAACCAGCTCCTA+AGG | + | chr4.1:26178805-26178824 | MS.gene006701:CDS | 50.0% | |
| GAAGCAGAGAGGAGAATTGC+AGG | + | chr4.1:26179248-26179267 | MS.gene006701:CDS | 50.0% | |
| GATTTGACCTTCGTCCCTAG+AGG | - | chr4.1:26181516-26181535 | None:intergenic | 50.0% | |
| GCCAAAGAGTTGGATGCCTT+AGG | + | chr4.1:26181983-26182002 | MS.gene006701:CDS | 50.0% | |
| GCTCCTAAGGATCCAATCCT+CGG | + | chr4.1:26178818-26178837 | MS.gene006701:CDS | 50.0% | |
| GCTTGTGCTCACAATCCTAC+TGG | + | chr4.1:26181669-26181688 | MS.gene006701:CDS | 50.0% | |
| GGACTGTATGGCCAAAGAGT+TGG | + | chr4.1:26181973-26181992 | MS.gene006701:CDS | 50.0% | |
| GGATGACAATGGAAAGCCTG+TGG | + | chr4.1:26179208-26179227 | MS.gene006701:CDS | 50.0% | |
| GGTCTTAATACGGGCAACGT+TGG | + | chr4.1:26183525-26183544 | MS.gene006701:CDS | 50.0% | |
| GTTATGGCAGACCGCATCAT+TGG | + | chr4.1:26182979-26182998 | MS.gene006701:CDS | 50.0% | |
| TACGGGCAACGTTGGATATG+TGG | + | chr4.1:26183533-26183552 | MS.gene006701:CDS | 50.0% | |
| TCACGATTCCTTGCTCTGTG+TGG | + | chr4.1:26180065-26180084 | MS.gene006701:intron | 50.0% | |
| TGGATTGCTGTACATGGGTC+TGG | - | chr4.1:26182353-26182372 | None:intergenic | 50.0% | |
| TGTGGCTAACGCTATCAACG+AGG | + | chr4.1:26183551-26183570 | MS.gene006701:CDS | 50.0% | |
| TTGGCATGTTCTGCTACAGC+GGG | + | chr4.1:26183312-26183331 | MS.gene006701:CDS | 50.0% | |
| ! | CTTACACAGAGTGCTCCAGA+CGG | + | chr4.1:26181627-26181646 | MS.gene006701:intron | 50.0% |
| ! | GCTGCAGTTCAGGCTTTATC+TGG | + | chr4.1:26181038-26181057 | MS.gene006701:CDS | 50.0% |
| ! | GTTCAGGCTTTATCTGGGAC+TGG | + | chr4.1:26181044-26181063 | MS.gene006701:CDS | 50.0% |
| !! | AGCAGGGAGTATCTTCCCAT+GGG | + | chr4.1:26180936-26180955 | MS.gene006701:intron | 50.0% |
| !! | GAATACTGACTTGGACCAGG+TGG | - | chr4.1:26181138-26181157 | None:intergenic | 50.0% |
| AGCAAAGGCTGTGAGAGGTG+GGG | - | chr4.1:26182508-26182527 | None:intergenic | 55.0% | |
| GCTTCGGTAACTCCGAGGAT+TGG | - | chr4.1:26178833-26178852 | None:intergenic | 55.0% | |
| GGCGCATATCGGGATGACAA+TGG | + | chr4.1:26179197-26179216 | MS.gene006701:CDS | 55.0% | |
| ! | ATCTGGGGTCTCCATTGCCA+TGG | + | chr4.1:26183034-26183053 | MS.gene006701:CDS | 55.0% |
| !! | AGGGAGTATCTTCCCATGGG+TGG | + | chr4.1:26180939-26180958 | MS.gene006701:intron | 55.0% |
| !! | GAGCAGGGAGTATCTTCCCA+TGG | + | chr4.1:26180935-26180954 | MS.gene006701:intron | 55.0% |
| CAGCGGGATGACACCAGAAC+AGG | + | chr4.1:26183328-26183347 | MS.gene006701:CDS | 60.0% | |
| GACTTGGACCAGGTGGGAAC+TGG | - | chr4.1:26181131-26181150 | None:intergenic | 60.0% | |
| ! | TAGCTCCTGTGACGGAGCTC+CGG | - | chr4.1:26178763-26178782 | None:intergenic | 60.0% |
| CTCAACCGGAGCTCCGTCAC+AGG | + | chr4.1:26178755-26178774 | MS.gene006701:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26178722 | 26183590 | 26178722 | ID=MS.gene006701 |
| chr4.1 | mRNA | 26178722 | 26183590 | 26178722 | ID=MS.gene006701.t1;Parent=MS.gene006701 |
| chr4.1 | exon | 26178722 | 26178895 | 26178722 | ID=MS.gene006701.t1.exon1;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26178722 | 26178895 | 26178722 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26179197 | 26179282 | 26179197 | ID=MS.gene006701.t1.exon2;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26179197 | 26179282 | 26179197 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26180941 | 26181147 | 26180941 | ID=MS.gene006701.t1.exon3;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26180941 | 26181147 | 26180941 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26181288 | 26181393 | 26181288 | ID=MS.gene006701.t1.exon4;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26181288 | 26181393 | 26181288 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26181636 | 26181740 | 26181636 | ID=MS.gene006701.t1.exon5;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26181636 | 26181740 | 26181636 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26181832 | 26182004 | 26181832 | ID=MS.gene006701.t1.exon6;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26181832 | 26182004 | 26181832 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26182291 | 26182450 | 26182291 | ID=MS.gene006701.t1.exon7;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26182291 | 26182450 | 26182291 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26182979 | 26183074 | 26182979 | ID=MS.gene006701.t1.exon8;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26182979 | 26183074 | 26182979 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26183311 | 26183405 | 26183311 | ID=MS.gene006701.t1.exon9;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26183311 | 26183405 | 26183311 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| chr4.1 | exon | 26183518 | 26183590 | 26183518 | ID=MS.gene006701.t1.exon10;Parent=MS.gene006701.t1 |
| chr4.1 | CDS | 26183518 | 26183590 | 26183518 | ID=cds.MS.gene006701.t1;Parent=MS.gene006701.t1 |
| Gene Sequence |
| Protein sequence |
