Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016021.t1 | AAB46611.1 | 100 | 455 | 0 | 0 | 1 | 455 | 1 | 455 | 1.90E-260 | 907.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016021.t1 | P26563 | 86.3 | 461 | 46 | 2 | 5 | 455 | 1 | 454 | 8.1e-228 | 790.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016021.t1 | Q40325 | 100.0 | 455 | 0 | 0 | 1 | 455 | 1 | 455 | 1.4e-260 | 907.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene016021 | MS.gene75310 | PPI |
| MS.gene014664 | MS.gene016021 | PPI |
| MS.gene031593 | MS.gene016021 | PPI |
| MS.gene016021 | MS.gene045479 | PPI |
| MS.gene006701 | MS.gene016021 | PPI |
| MS.gene40322 | MS.gene016021 | PPI |
| MS.gene016021 | MS.gene031204 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016021.t1 | MTR_1g013050 | 97.204 | 465 | 3 | 1 | 1 | 455 | 1 | 465 | 0.0 | 925 |
| MS.gene016021.t1 | MTR_3g110065 | 55.750 | 400 | 175 | 2 | 49 | 447 | 12 | 410 | 1.22e-163 | 468 |
| MS.gene016021.t1 | MTR_3g110065 | 53.938 | 419 | 191 | 2 | 30 | 447 | 33 | 450 | 1.27e-163 | 469 |
| MS.gene016021.t1 | MTR_3g110065 | 53.500 | 400 | 184 | 2 | 30 | 428 | 33 | 431 | 2.06e-155 | 447 |
| MS.gene016021.t1 | MTR_4g080140 | 46.835 | 395 | 208 | 2 | 53 | 447 | 25 | 417 | 2.72e-131 | 386 |
| MS.gene016021.t1 | MTR_4g080130 | 45.960 | 396 | 205 | 4 | 53 | 447 | 20 | 407 | 1.56e-122 | 363 |
| MS.gene016021.t1 | MTR_4g014910 | 96.296 | 54 | 2 | 0 | 324 | 377 | 23 | 76 | 5.01e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene016021.t1 | AT4G31990 | 84.459 | 444 | 65 | 2 | 16 | 455 | 10 | 453 | 0.0 | 784 |
| MS.gene016021.t1 | AT4G31990 | 84.459 | 444 | 65 | 2 | 16 | 455 | 10 | 453 | 0.0 | 784 |
| MS.gene016021.t1 | AT4G31990 | 84.389 | 442 | 65 | 2 | 16 | 453 | 10 | 451 | 0.0 | 780 |
| MS.gene016021.t1 | AT4G31990 | 83.900 | 441 | 68 | 3 | 16 | 455 | 10 | 448 | 0.0 | 769 |
| MS.gene016021.t1 | AT5G19550 | 55.556 | 396 | 174 | 2 | 53 | 447 | 3 | 397 | 3.56e-163 | 466 |
| MS.gene016021.t1 | AT5G11520 | 55.250 | 400 | 177 | 2 | 49 | 447 | 43 | 441 | 5.33e-161 | 462 |
| MS.gene016021.t1 | AT1G62800 | 51.546 | 388 | 186 | 2 | 61 | 447 | 11 | 397 | 4.40e-145 | 420 |
| MS.gene016021.t1 | AT1G62800 | 51.680 | 387 | 185 | 2 | 61 | 447 | 11 | 395 | 4.43e-145 | 420 |
| MS.gene016021.t1 | AT2G30970 | 49.367 | 395 | 198 | 2 | 53 | 447 | 31 | 423 | 2.87e-138 | 404 |
| MS.gene016021.t1 | AT2G30970 | 49.367 | 395 | 198 | 2 | 53 | 447 | 31 | 423 | 2.87e-138 | 404 |
| MS.gene016021.t1 | AT1G62800 | 50.765 | 327 | 160 | 1 | 61 | 386 | 11 | 337 | 5.45e-121 | 357 |
Find 115 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAACTTCTCCAATTTA+AGG | 0.097948 | 1.4:+8139808 | MS.gene016021:CDS |
| GCCACTGTCCAAGGTCTTTC+AGG | 0.182756 | 1.4:+8141319 | MS.gene016021:CDS |
| ATATATACACACCCTTAAAT+TGG | 0.244433 | 1.4:-8139820 | None:intergenic |
| TGTGCTTAATGTTGTGAAAA+AGG | 0.302533 | 1.4:+8140819 | MS.gene016021:CDS |
| ACTCTTTGCTGTTTGATTGC+TGG | 0.307680 | 1.4:-8141180 | None:intergenic |
| AAATCCAAGCCAACTGTCTT+GGG | 0.322308 | 1.4:-8141578 | None:intergenic |
| GTATCTCCCCATTGAGGGTT+TGG | 0.326774 | 1.4:+8141110 | MS.gene016021:intron |
| CAACACCTTGTTGCAGATTC+CGG | 0.332391 | 1.4:-8142368 | None:intergenic |
| GCTCCTCCTGATCCAATTCT+TGG | 0.340612 | 1.4:+8140709 | MS.gene016021:CDS |
| GCTTCAGAAACTCCAAGAAT+TGG | 0.355675 | 1.4:-8140721 | None:intergenic |
| AGGATTGTTGCTAATATTGT+TGG | 0.362974 | 1.4:+8142876 | MS.gene016021:CDS |
| TTCACAACATTAAGCACATA+TGG | 0.368331 | 1.4:-8140814 | None:intergenic |
| CTCCAACCCTTTCAGCATAA+AGG | 0.377297 | 1.4:-8142322 | None:intergenic |
| CAACAACTTCTCCAATTTAA+GGG | 0.377921 | 1.4:+8139809 | MS.gene016021:CDS |
| CTGTTGCGACTAATGTTTCT+CGG | 0.378388 | 1.4:+8140668 | MS.gene016021:CDS |
| GACTAATGTTTCTCGGTTTG+AGG | 0.382204 | 1.4:+8140675 | MS.gene016021:CDS |
| ATCTGCCAGGTATTCACATT+TGG | 0.389303 | 1.4:-8143304 | None:intergenic |
| GTCCAAGGTCTTTCAGGAAC+TGG | 0.391375 | 1.4:+8141325 | MS.gene016021:CDS |
| CACAGGCTTGAACAAGAGCC+AGG | 0.400944 | 1.4:+8143055 | MS.gene016021:CDS |
| TCAAGCTCAATCTTGGAGTT+GGG | 0.403543 | 1.4:+8140767 | MS.gene016021:CDS |
| AAAATCCAAGCCAACTGTCT+TGG | 0.413094 | 1.4:-8141579 | None:intergenic |
| GGATTGTTGCTAATATTGTT+GGG | 0.416631 | 1.4:+8142877 | MS.gene016021:CDS |
| AATGATGTCAAGCTCAATCT+TGG | 0.417253 | 1.4:+8140760 | MS.gene016021:CDS |
| GGGCATGATAGAAGATATAA+AGG | 0.426415 | 1.4:+8141604 | MS.gene016021:CDS |
| AAATGCAGCCAAACCCTCAA+TGG | 0.440208 | 1.4:-8141118 | None:intergenic |
| TGATGAATGGAAAGCAGAAA+TGG | 0.440679 | 1.4:+8142914 | MS.gene016021:CDS |
| CCAGGTATTCACATTTGGCC+AGG | 0.445988 | 1.4:-8143299 | None:intergenic |
| GGGTAAAGAGCCAATTGAAA+AGG | 0.450280 | 1.4:+8142811 | MS.gene016021:intron |
| AATGCAGCCAAACCCTCAAT+GGG | 0.453593 | 1.4:-8141117 | None:intergenic |
| ACTAATGTTTCTCGGTTTGA+GGG | 0.459873 | 1.4:+8140676 | MS.gene016021:CDS |
| TTCCCTGGCAGGATTGTCCC+TGG | 0.460092 | 1.4:+8143281 | MS.gene016021:CDS |
| CTCCAGCTCTCTTTGATGAA+TGG | 0.460717 | 1.4:+8142901 | MS.gene016021:CDS |
| ACAATCCTAGCCCCGTGAAC+TGG | 0.466986 | 1.4:-8142861 | None:intergenic |
| GTCAAGCTCAATCTTGGAGT+TGG | 0.467096 | 1.4:+8140766 | MS.gene016021:CDS |
| CCTCGGCCTTTATGCTGAAA+GGG | 0.475126 | 1.4:+8142316 | MS.gene016021:CDS |
| ACCTCGGCCTTTATGCTGAA+AGG | 0.476101 | 1.4:+8142315 | MS.gene016021:CDS |
| TTCCATTCATCAAAGAGAGC+TGG | 0.483532 | 1.4:-8142903 | None:intergenic |
| ACTCAGGTTGCCACTGTCCA+AGG | 0.484927 | 1.4:+8141310 | MS.gene016021:intron |
| CAACAGGGAAAGCTTAAGCT+TGG | 0.487736 | 1.4:+8139783 | MS.gene016021:intron |
| ATTTCTTCAAAAGACAAAAG+TGG | 0.499207 | 1.4:+8142987 | MS.gene016021:CDS |
| GGCCTTTATGCTGAAAGGGT+TGG | 0.499920 | 1.4:+8142320 | MS.gene016021:CDS |
| GAAACTCCAAGAATTGGATC+AGG | 0.502800 | 1.4:-8140715 | None:intergenic |
| TACTCTAATCCACCAGTTCA+CGG | 0.502971 | 1.4:+8142849 | MS.gene016021:CDS |
| ATAGGCATGTTCTCATTCAC+AGG | 0.504193 | 1.4:+8143038 | MS.gene016021:CDS |
| TGACCCCAAGACAGTTGGCT+TGG | 0.506959 | 1.4:+8141574 | MS.gene016021:CDS |
| TTGCAGTATCTCCCCATTGA+GGG | 0.508032 | 1.4:+8141105 | MS.gene016021:intron |
| TTGTAGTTCTTCCGTTCTGT+AGG | 0.509216 | 1.4:-8140791 | None:intergenic |
| TTAGGCAGAAAATCTTATGC+TGG | 0.512452 | 1.4:+8140980 | MS.gene016021:intron |
| TTCAAAAGACAAAAGTGGAA+AGG | 0.512714 | 1.4:+8142992 | MS.gene016021:CDS |
| TAATGTCATTTCCTCATCAC+CGG | 0.518924 | 1.4:+8142349 | MS.gene016021:CDS |
| TCATTCATACTCAAGCAGAT+AGG | 0.521208 | 1.4:+8143020 | MS.gene016021:CDS |
| GAAAATCTTATGCTGGAGAG+AGG | 0.523108 | 1.4:+8140987 | MS.gene016021:CDS |
| CATATATACATGACAAAGGA+TGG | 0.524159 | 1.4:+8143252 | MS.gene016021:CDS |
| ATCCACCAGTTCACGGGGCT+AGG | 0.527581 | 1.4:+8142856 | MS.gene016021:CDS |
| TGTTTATTCAGTCATCTGGT+CGG | 0.530552 | 1.4:+8140635 | MS.gene016021:intron |
| TGGCCAGGGACAATCCTGCC+AGG | 0.531090 | 1.4:-8143284 | None:intergenic |
| GAAAGCAGAAATGGAAATGA+TGG | 0.532291 | 1.4:+8142923 | MS.gene016021:CDS |
| ACTCTAATCCACCAGTTCAC+GGG | 0.533141 | 1.4:+8142850 | MS.gene016021:CDS |
| CAGAAGCCGCATCTTCATCA+AGG | 0.534605 | 1.4:-8142235 | None:intergenic |
| TCGGTTTGAGGGTATACCGA+TGG | 0.536506 | 1.4:+8140687 | MS.gene016021:CDS |
| AGTAGCACAAAAGTTCCTTC+CGG | 0.540828 | 1.4:-8141884 | None:intergenic |
| ATTGCAGTATCTCCCCATTG+AGG | 0.542657 | 1.4:+8141104 | MS.gene016021:intron |
| AAGACAAAAGTGGAAAGGAT+TGG | 0.543794 | 1.4:+8142997 | MS.gene016021:CDS |
| AAAATCTTATGCTGGAGAGA+GGG | 0.546257 | 1.4:+8140988 | MS.gene016021:CDS |
| GGATGTGCACATAACCCTAC+TGG | 0.546697 | 1.4:+8141911 | MS.gene016021:CDS |
| CCCTTTCAGCATAAAGGCCG+AGG | 0.547062 | 1.4:-8142316 | None:intergenic |
| GTGACAATATGACAAATAAG+TGG | 0.547417 | 1.4:+8143229 | MS.gene016021:CDS |
| GATCCTCGACACCAACATCA+AGG | 0.554684 | 1.4:+8139687 | MS.gene016021:CDS |
| GCAGAAATGGAAATGATGGC+TGG | 0.555365 | 1.4:+8142927 | MS.gene016021:CDS |
| ATCCTAGCCCCGTGAACTGG+TGG | 0.557228 | 1.4:-8142858 | None:intergenic |
| GGAACTGGTTCTCTGCGACT+AGG | 0.557349 | 1.4:+8141340 | MS.gene016021:CDS |
| CAAGCTCAATCTTGGAGTTG+GGG | 0.560345 | 1.4:+8140768 | MS.gene016021:CDS |
| AACCAGTTCCTGAAAGACCT+TGG | 0.562935 | 1.4:-8141327 | None:intergenic |
| GGTGTTGGATCAATACCAGT+AGG | 0.563773 | 1.4:-8141926 | None:intergenic |
| CCTGGCCAAATGTGAATACC+TGG | 0.566047 | 1.4:+8143299 | MS.gene016021:CDS |
| GGGTTTGGCTGCATTTAACA+AGG | 0.567369 | 1.4:+8141125 | MS.gene016021:CDS |
| AATCGATAATAGCATCTGCC+AGG | 0.570339 | 1.4:-8143317 | None:intergenic |
| TACTATGACCCCAAGACAGT+TGG | 0.570858 | 1.4:+8141569 | MS.gene016021:CDS |
| ATTGTTTGAGTCACGTGGCA+TGG | 0.576587 | 1.4:+8142262 | MS.gene016021:CDS |
| CTGTCTTGGGGTCATAGTAT+CGG | 0.582217 | 1.4:-8141565 | None:intergenic |
| GTCATCTGGTCGGATCTGCA+TGG | 0.583900 | 1.4:+8140645 | MS.gene016021:intron |
| TCCTGAAAGACCTTGGACAG+TGG | 0.583931 | 1.4:-8141320 | None:intergenic |
| GATGGAAGGATTTCCCTGGC+AGG | 0.584781 | 1.4:+8143270 | MS.gene016021:CDS |
| AAATCTTATGCTGGAGAGAG+GGG | 0.586075 | 1.4:+8140989 | MS.gene016021:CDS |
| CAGGTATTCACATTTGGCCA+GGG | 0.588304 | 1.4:-8143298 | None:intergenic |
| TGTTGCAGATTCCGGTGATG+AGG | 0.590376 | 1.4:-8142360 | None:intergenic |
| AAAGGATGGAAGGATTTCCC+TGG | 0.594526 | 1.4:+8143266 | MS.gene016021:CDS |
| TGGAGTTGGGGCCTACAGAA+CGG | 0.598254 | 1.4:+8140780 | MS.gene016021:CDS |
| TATACATGACAAAGGATGGA+AGG | 0.601628 | 1.4:+8143256 | MS.gene016021:CDS |
| CATACACAGAACCTTGATGT+TGG | 0.601911 | 1.4:-8139698 | None:intergenic |
| CTCTAATCCACCAGTTCACG+GGG | 0.602639 | 1.4:+8142851 | MS.gene016021:CDS |
| AGCAGAGTGTGAAGGTACAG+AGG | 0.602814 | 1.4:-8139656 | None:intergenic |
| AAATGGAAATGATGGCTGGA+AGG | 0.603044 | 1.4:+8142931 | MS.gene016021:CDS |
| ATTGGATCAGGAGGAGCCAT+CGG | 0.603899 | 1.4:-8140703 | None:intergenic |
| GCAACTGCAGAGTTGTTGCT+CGG | 0.605597 | 1.4:+8141147 | MS.gene016021:CDS |
| TGATCCAACACCAGAACAGT+GGG | 0.608466 | 1.4:+8141937 | MS.gene016021:CDS |
| TAGTATCGGTACTCAGACCA+TGG | 0.615683 | 1.4:-8141551 | None:intergenic |
| ACTCCAAGAATTGGATCAGG+AGG | 0.616716 | 1.4:-8140712 | None:intergenic |
| GAACCTTGATGTTGGTGTCG+AGG | 0.620995 | 1.4:-8139690 | None:intergenic |
| AATCCAAGCCAACTGTCTTG+GGG | 0.626556 | 1.4:-8141577 | None:intergenic |
| GTGAGATTGTTTGAGTCACG+TGG | 0.628082 | 1.4:+8142257 | MS.gene016021:CDS |
| TGGAAGCCTTGATGAAGATG+CGG | 0.629976 | 1.4:+8142229 | MS.gene016021:CDS |
| GGCCAGGGACAATCCTGCCA+GGG | 0.630137 | 1.4:-8143283 | None:intergenic |
| TCAACGATGCTCGAGTACCA+TGG | 0.630826 | 1.4:+8141534 | MS.gene016021:CDS |
| CATCACCGGAATCTGCAACA+AGG | 0.630864 | 1.4:+8142363 | MS.gene016021:CDS |
| TTTGATATCAAATCCTACGT+GGG | 0.636065 | 1.4:+8141402 | MS.gene016021:CDS |
| GTGTTGGATCAATACCAGTA+GGG | 0.638468 | 1.4:-8141925 | None:intergenic |
| TTGATATCAAATCCTACGTG+GGG | 0.645817 | 1.4:+8141403 | MS.gene016021:CDS |
| GAAAGTGAAGCAGAGTGTGA+AGG | 0.650101 | 1.4:-8139664 | None:intergenic |
| GTGGCATATATACATGACAA+AGG | 0.654355 | 1.4:+8143248 | MS.gene016021:CDS |
| TTGATCCAACACCAGAACAG+TGG | 0.664140 | 1.4:+8141936 | MS.gene016021:CDS |
| ACTGGTGGATTAGAGTACAT+TGG | 0.674716 | 1.4:-8142843 | None:intergenic |
| GGAGAGAGGGGAAAACAAAG+AGG | 0.684124 | 1.4:+8141001 | MS.gene016021:CDS |
| ATAAAATTCACACCCCACGT+AGG | 0.732753 | 1.4:-8141415 | None:intergenic |
| ATGCAGCCAAACCCTCAATG+GGG | 0.751116 | 1.4:-8141116 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATCATACTTTTTATA+TGG | + | chr1.4:8141657-8141676 | MS.gene016021:intron | 10.0% |
| !!! | TAATTTCATTTTCTAAATAA+TGG | - | chr1.4:8141642-8141661 | None:intergenic | 10.0% |
| !! | TAAAATAAGAAATCAATACA+TGG | - | chr1.4:8140891-8140910 | None:intergenic | 15.0% |
| !! | TATAAAATAGATAAGTCAAA+GGG | - | chr1.4:8143092-8143111 | None:intergenic | 15.0% |
| !! | TGATTAAATCAATCATAAAT+AGG | - | chr1.4:8139736-8139755 | None:intergenic | 15.0% |
| !!! | TCTTATTTTTGTTTCTATAA+TGG | + | chr1.4:8140515-8140534 | MS.gene016021:intron | 15.0% |
| !!! | TTAAGTTGAATATATACTAT+AGG | - | chr1.4:8142671-8142690 | None:intergenic | 15.0% |
| !!! | TTGATGAAATTATTGTTTTT+AGG | + | chr1.4:8140962-8140981 | MS.gene016021:intron | 15.0% |
| !!! | TTTAAAATTGCAATTGAAAT+TGG | + | chr1.4:8140551-8140570 | MS.gene016021:intron | 15.0% |
| !! | AAATTGGTTAATTAGGATTT+AGG | + | chr1.4:8140567-8140586 | MS.gene016021:intron | 20.0% |
| !! | ATAAAATAGATAAGTCAAAG+GGG | - | chr1.4:8143091-8143110 | None:intergenic | 20.0% |
| !! | ATTACTCTATGATCAATTTA+AGG | + | chr1.4:8139896-8139915 | MS.gene016021:intron | 20.0% |
| !! | GTATAAAATAGATAAGTCAA+AGG | - | chr1.4:8143093-8143112 | None:intergenic | 20.0% |
| !! | TATATCGTGAAATATATTCA+CGG | - | chr1.4:8142173-8142192 | None:intergenic | 20.0% |
| !! | TTACTCTATGATCAATTTAA+GGG | + | chr1.4:8139897-8139916 | MS.gene016021:intron | 20.0% |
| !!! | ATCAATTGTTTTGTTTAAGA+AGG | + | chr1.4:8142690-8142709 | MS.gene016021:intron | 20.0% |
| !!! | ATTTTTGTTTTCATTCAACA+GGG | + | chr1.4:8139768-8139787 | MS.gene016021:intron | 20.0% |
| !!! | CTATCTTTTTTGTAAATTTG+TGG | + | chr1.4:8142045-8142064 | MS.gene016021:intron | 20.0% |
| !!! | TACAATTCTAATCTAAAGTA+AGG | - | chr1.4:8140276-8140295 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTTTCATTCAAC+AGG | + | chr1.4:8139767-8139786 | MS.gene016021:intron | 20.0% |
| !!! | TTTAAAATTGCAATTCAAAG+TGG | + | chr1.4:8140143-8140162 | MS.gene016021:intron | 20.0% |
| ! | AACTGCTCATTAAAAATTTC+AGG | + | chr1.4:8142196-8142215 | MS.gene016021:intron | 25.0% |
| ! | ACTGCTCATTAAAAATTTCA+GGG | + | chr1.4:8142197-8142216 | MS.gene016021:intron | 25.0% |
| ! | AGACAAAATGAAATTGATCA+GGG | - | chr1.4:8140607-8140626 | None:intergenic | 25.0% |
| ! | ATATATACACACCCTTAAAT+TGG | - | chr1.4:8139823-8139842 | None:intergenic | 25.0% |
| ! | ATTAGAATTGTAAAACCAAG+TGG | + | chr1.4:8140284-8140303 | MS.gene016021:intron | 25.0% |
| ! | ATTTCTTCAAAAGACAAAAG+TGG | + | chr1.4:8142987-8143006 | MS.gene016021:CDS | 25.0% |
| ! | CCATTTATGAACACAAAAAT+TGG | - | chr1.4:8140110-8140129 | None:intergenic | 25.0% |
| ! | GATGATTACTATGTATTTCA+GGG | + | chr1.4:8142791-8142810 | MS.gene016021:intron | 25.0% |
| ! | GCAATTGAAATTGGTTAATT+AGG | + | chr1.4:8140560-8140579 | MS.gene016021:intron | 25.0% |
| ! | TAAAATAGATAAGTCAAAGG+GGG | - | chr1.4:8143090-8143109 | None:intergenic | 25.0% |
| ! | TGATGATTACTATGTATTTC+AGG | + | chr1.4:8142790-8142809 | MS.gene016021:intron | 25.0% |
| ! | TTTAATTCATCTTGTAGTGA+AGG | + | chr1.4:8141758-8141777 | MS.gene016021:intron | 25.0% |
| ! | TTTATCAATCAAGAGTCATA+GGG | + | chr1.4:8142490-8142509 | MS.gene016021:intron | 25.0% |
| !! | ACAAAGAGGTAATTTTCTTT+AGG | + | chr1.4:8141015-8141034 | MS.gene016021:intron | 25.0% |
| !! | ACTGTTTGCATTTTTATAGT+CGG | + | chr1.4:8141859-8141878 | MS.gene016021:intron | 25.0% |
| !! | CCAATTTTTGTGTTCATAAA+TGG | + | chr1.4:8140107-8140126 | MS.gene016021:intron | 25.0% |
| !! | TCTTTGTTATATCTTCTGTT+TGG | + | chr1.4:8143201-8143220 | MS.gene016021:intron | 25.0% |
| !! | TGAATTCTGATTCTTTTTCT+AGG | + | chr1.4:8142451-8142470 | MS.gene016021:intron | 25.0% |
| !! | TGTGAATTTTATTCCTTTCT+CGG | + | chr1.4:8141426-8141445 | MS.gene016021:intron | 25.0% |
| !! | TTTTATCAATCAAGAGTCAT+AGG | + | chr1.4:8142489-8142508 | MS.gene016021:intron | 25.0% |
| !!! | ATTTTGTTTATTCAGTCATC+TGG | + | chr1.4:8140631-8140650 | MS.gene016021:intron | 25.0% |
| !!! | CATTTTCTAAATAATGGATG+AGG | - | chr1.4:8141636-8141655 | None:intergenic | 25.0% |
| AAACCTTACAACAAATGAAG+TGG | + | chr1.4:8142113-8142132 | MS.gene016021:intron | 30.0% | |
| AAGTTCATTTCAACTCATTC+AGG | - | chr1.4:8142602-8142621 | None:intergenic | 30.0% | |
| AGGATTGTTGCTAATATTGT+TGG | + | chr1.4:8142876-8142895 | MS.gene016021:CDS | 30.0% | |
| ATAAGAACAGAGTTAACATC+AGG | - | chr1.4:8140501-8140520 | None:intergenic | 30.0% | |
| CAACAACTTCTCCAATTTAA+GGG | + | chr1.4:8139809-8139828 | MS.gene016021:CDS | 30.0% | |
| CAACATCAAAAAATGGAAAG+TGG | - | chr1.4:8141994-8142013 | None:intergenic | 30.0% | |
| CAGACAAAATGAAATTGATC+AGG | - | chr1.4:8140608-8140627 | None:intergenic | 30.0% | |
| CATATATACATGACAAAGGA+TGG | + | chr1.4:8143252-8143271 | MS.gene016021:CDS | 30.0% | |
| GGATTGTTGCTAATATTGTT+GGG | + | chr1.4:8142877-8142896 | MS.gene016021:CDS | 30.0% | |
| GGGTGTGTATATATAATATG+AGG | + | chr1.4:8139829-8139848 | MS.gene016021:intron | 30.0% | |
| GTGACAATATGACAAATAAG+TGG | + | chr1.4:8143229-8143248 | MS.gene016021:CDS | 30.0% | |
| TACTATAGCATACATTGCAT+TGG | - | chr1.4:8142739-8142758 | None:intergenic | 30.0% | |
| TAGGGAATAAACTTAACGAT+AGG | + | chr1.4:8142508-8142527 | MS.gene016021:intron | 30.0% | |
| TCAACAACTTCTCCAATTTA+AGG | + | chr1.4:8139808-8139827 | MS.gene016021:CDS | 30.0% | |
| TGGTAAGCAACATCAAAAAA+TGG | - | chr1.4:8142001-8142020 | None:intergenic | 30.0% | |
| TGTGCTTAATGTTGTGAAAA+AGG | + | chr1.4:8140819-8140838 | MS.gene016021:CDS | 30.0% | |
| TTCAAAAGACAAAAGTGGAA+AGG | + | chr1.4:8142992-8143011 | MS.gene016021:CDS | 30.0% | |
| TTCACAACATTAAGCACATA+TGG | - | chr1.4:8140817-8140836 | None:intergenic | 30.0% | |
| TTGGTTAATTAGGATTTAGG+AGG | + | chr1.4:8140570-8140589 | MS.gene016021:intron | 30.0% | |
| TTTGATATCAAATCCTACGT+GGG | + | chr1.4:8141402-8141421 | MS.gene016021:CDS | 30.0% | |
| ! | AAAATGTAATTTTCAGCTCG+AGG | + | chr1.4:8140029-8140048 | MS.gene016021:intron | 30.0% |
| ! | CCATGCAATTCTAAAGAAAA+TGG | + | chr1.4:8141819-8141838 | MS.gene016021:intron | 30.0% |
| ! | GTTGATAGAGTCAAAGAAAT+AGG | - | chr1.4:8143128-8143147 | None:intergenic | 30.0% |
| ! | TTATTGACTGTGATTTCACT+TGG | + | chr1.4:8141080-8141099 | MS.gene016021:intron | 30.0% |
| ! | TTCTGATTCTTTTTCTAGGT+AGG | + | chr1.4:8142455-8142474 | MS.gene016021:intron | 30.0% |
| ! | TTTTGATATCAAATCCTACG+TGG | + | chr1.4:8141401-8141420 | MS.gene016021:CDS | 30.0% |
| !! | TATCCACTTCATTTGTTGTA+AGG | - | chr1.4:8142119-8142138 | None:intergenic | 30.0% |
| !!! | ATTTTTTGATGTTGCTTACC+AGG | + | chr1.4:8142000-8142019 | MS.gene016021:CDS | 30.0% |
| !!! | CCATTTTCTTTAGAATTGCA+TGG | - | chr1.4:8141822-8141841 | None:intergenic | 30.0% |
| !!! | TTATTTTTGTCTTAACCCTC+CGG | - | chr1.4:8140455-8140474 | None:intergenic | 30.0% |
| AAAATCTTATGCTGGAGAGA+GGG | + | chr1.4:8140988-8141007 | MS.gene016021:CDS | 35.0% | |
| AACATACGATTAACAACAGC+TGG | - | chr1.4:8140087-8140106 | None:intergenic | 35.0% | |
| AAGAAATCAATACATGGCAC+AGG | - | chr1.4:8140885-8140904 | None:intergenic | 35.0% | |
| AAGACAAAAGTGGAAAGGAT+TGG | + | chr1.4:8142997-8143016 | MS.gene016021:CDS | 35.0% | |
| AAGGATAAAAACTGTTAGGC+AGG | + | chr1.4:8142950-8142969 | MS.gene016021:CDS | 35.0% | |
| AAGTGGATACAACATGAAAC+CGG | + | chr1.4:8142130-8142149 | MS.gene016021:intron | 35.0% | |
| AATGATGTCAAGCTCAATCT+TGG | + | chr1.4:8140760-8140779 | MS.gene016021:CDS | 35.0% | |
| ATGAAATTGATCAGGGTAGT+AGG | - | chr1.4:8140600-8140619 | None:intergenic | 35.0% | |
| ATTCCTTTCTCGGTTTAACT+TGG | + | chr1.4:8141436-8141455 | MS.gene016021:intron | 35.0% | |
| CAGTCATACAGTAAAAACCT+CGG | + | chr1.4:8142299-8142318 | MS.gene016021:CDS | 35.0% | |
| CTATAGTAAACGTTCTGTCT+TGG | + | chr1.4:8142751-8142770 | MS.gene016021:intron | 35.0% | |
| CTGGAAGGATAAAAACTGTT+AGG | + | chr1.4:8142946-8142965 | MS.gene016021:CDS | 35.0% | |
| GAAAGCAGAAATGGAAATGA+TGG | + | chr1.4:8142923-8142942 | MS.gene016021:CDS | 35.0% | |
| GAATTGTAAAACCAAGTGGT+TGG | + | chr1.4:8140288-8140307 | MS.gene016021:intron | 35.0% | |
| GATCAACAATTGTTTCAGTC+AGG | - | chr1.4:8140373-8140392 | None:intergenic | 35.0% | |
| GGGCATGATAGAAGATATAA+AGG | + | chr1.4:8141604-8141623 | MS.gene016021:CDS | 35.0% | |
| GGTCATGATATTTGTTTCGA+GGG | + | chr1.4:8141457-8141476 | MS.gene016021:intron | 35.0% | |
| GTGGCATATATACATGACAA+AGG | + | chr1.4:8143248-8143267 | MS.gene016021:CDS | 35.0% | |
| GTTAATTAGGATTTAGGAGG+TGG | + | chr1.4:8140573-8140592 | MS.gene016021:intron | 35.0% | |
| GTTGGATCAAGCAATTAACA+AGG | + | chr1.4:8140306-8140325 | MS.gene016021:intron | 35.0% | |
| TATACATGACAAAGGATGGA+AGG | + | chr1.4:8143256-8143275 | MS.gene016021:CDS | 35.0% | |
| TCAACTGAAAAAATAGCCTC+AGG | - | chr1.4:8140929-8140948 | None:intergenic | 35.0% | |
| TCATTCATACTCAAGCAGAT+AGG | + | chr1.4:8143020-8143039 | MS.gene016021:CDS | 35.0% | |
| TGATGAATGGAAAGCAGAAA+TGG | + | chr1.4:8142914-8142933 | MS.gene016021:CDS | 35.0% | |
| TGGTCATGATATTTGTTTCG+AGG | + | chr1.4:8141456-8141475 | MS.gene016021:intron | 35.0% | |
| TGTTTATTCAGTCATCTGGT+CGG | + | chr1.4:8140635-8140654 | MS.gene016021:intron | 35.0% | |
| TTAGGCAGAAAATCTTATGC+TGG | + | chr1.4:8140980-8140999 | MS.gene016021:intron | 35.0% | |
| TTGATATCAAATCCTACGTG+GGG | + | chr1.4:8141403-8141422 | MS.gene016021:CDS | 35.0% | |
| TTTACCAAAGATTGTGTACC+TGG | - | chr1.4:8142021-8142040 | None:intergenic | 35.0% | |
| ! | AAACAGCAAAGAGTATGTAG+TGG | + | chr1.4:8141189-8141208 | MS.gene016021:intron | 35.0% |
| ! | AAATTTCAGGGTTTTGCTAG+TGG | + | chr1.4:8142209-8142228 | MS.gene016021:intron | 35.0% |
| ! | ACTAATGTTTCTCGGTTTGA+GGG | + | chr1.4:8140676-8140695 | MS.gene016021:CDS | 35.0% |
| ! | AGGTAACATTTTTGTCTTGC+AGG | + | chr1.4:8141494-8141513 | MS.gene016021:intron | 35.0% |
| ! | CTGATAGAACGATATTTTCC+TGG | + | chr1.4:8141370-8141389 | MS.gene016021:CDS | 35.0% |
| ! | CTTAACGATAGGCATTTTGT+AGG | + | chr1.4:8142519-8142538 | MS.gene016021:intron | 35.0% |
| ! | GATATCAAAACTTTTGCTCC+AGG | - | chr1.4:8141391-8141410 | None:intergenic | 35.0% |
| ! | TAATGTCATTTCCTCATCAC+CGG | + | chr1.4:8142349-8142368 | MS.gene016021:CDS | 35.0% |
| ! | TTCTTTTTCTAGGTAGGTGA+AGG | + | chr1.4:8142461-8142480 | MS.gene016021:intron | 35.0% |
| ! | TTTCTCTCTCCTTTTTACTC+AGG | + | chr1.4:8141294-8141313 | MS.gene016021:intron | 35.0% |
| AAAATCCAAGCCAACTGTCT+TGG | - | chr1.4:8141582-8141601 | None:intergenic | 40.0% | |
| AAATCCAAGCCAACTGTCTT+GGG | - | chr1.4:8141581-8141600 | None:intergenic | 40.0% | |
| AAATCTTATGCTGGAGAGAG+GGG | + | chr1.4:8140989-8141008 | MS.gene016021:CDS | 40.0% | |
| AAATGGAAATGATGGCTGGA+AGG | + | chr1.4:8142931-8142950 | MS.gene016021:CDS | 40.0% | |
| AATCGATAATAGCATCTGCC+AGG | - | chr1.4:8143320-8143339 | None:intergenic | 40.0% | |
| AATTGCTTGATCCAACCACT+TGG | - | chr1.4:8140302-8140321 | None:intergenic | 40.0% | |
| ACTTCTTGTTCAGAAACCTG+AGG | + | chr1.4:8140910-8140929 | MS.gene016021:intron | 40.0% | |
| AGTAGCACAAAAGTTCCTTC+CGG | - | chr1.4:8141887-8141906 | None:intergenic | 40.0% | |
| ATAAAATTCACACCCCACGT+AGG | - | chr1.4:8141418-8141437 | None:intergenic | 40.0% | |
| ATAGGCATGTTCTCATTCAC+AGG | + | chr1.4:8143038-8143057 | MS.gene016021:CDS | 40.0% | |
| ATCTGCCAGGTATTCACATT+TGG | - | chr1.4:8143307-8143326 | None:intergenic | 40.0% | |
| CATACACAGAACCTTGATGT+TGG | - | chr1.4:8139701-8139720 | None:intergenic | 40.0% | |
| CTGTTGCGACTAATGTTTCT+CGG | + | chr1.4:8140668-8140687 | MS.gene016021:CDS | 40.0% | |
| CTTACCAGGTACACAATCTT+TGG | + | chr1.4:8142014-8142033 | MS.gene016021:intron | 40.0% | |
| GAAAATCTTATGCTGGAGAG+AGG | + | chr1.4:8140987-8141006 | MS.gene016021:CDS | 40.0% | |
| GAAACTCCAAGAATTGGATC+AGG | - | chr1.4:8140718-8140737 | None:intergenic | 40.0% | |
| GCTTCAGAAACTCCAAGAAT+TGG | - | chr1.4:8140724-8140743 | None:intergenic | 40.0% | |
| GGGTAAAGAGCCAATTGAAA+AGG | + | chr1.4:8142811-8142830 | MS.gene016021:intron | 40.0% | |
| GTGAATTCGTGTTCTTCTGT+AGG | - | chr1.4:8141784-8141803 | None:intergenic | 40.0% | |
| GTGTTGGATCAATACCAGTA+GGG | - | chr1.4:8141928-8141947 | None:intergenic | 40.0% | |
| TACTCTAATCCACCAGTTCA+CGG | + | chr1.4:8142849-8142868 | MS.gene016021:CDS | 40.0% | |
| TCAAGCTCAATCTTGGAGTT+GGG | + | chr1.4:8140767-8140786 | MS.gene016021:CDS | 40.0% | |
| TGACCAAGTTAAACCGAGAA+AGG | - | chr1.4:8141442-8141461 | None:intergenic | 40.0% | |
| TTCCATTCATCAAAGAGAGC+TGG | - | chr1.4:8142906-8142925 | None:intergenic | 40.0% | |
| TTGTAGTTCTTCCGTTCTGT+AGG | - | chr1.4:8140794-8140813 | None:intergenic | 40.0% | |
| ! | GACTAATGTTTCTCGGTTTG+AGG | + | chr1.4:8140675-8140694 | MS.gene016021:CDS | 40.0% |
| !! | ACTCTTTGCTGTTTGATTGC+TGG | - | chr1.4:8141183-8141202 | None:intergenic | 40.0% |
| !! | ACTGGTGGATTAGAGTACAT+TGG | - | chr1.4:8142846-8142865 | None:intergenic | 40.0% |
| !! | TGCATTTTTATAGTCGGCTC+CGG | + | chr1.4:8141865-8141884 | MS.gene016021:intron | 40.0% |
| !!! | ACAGTTGGCTTGGATTTTGA+GGG | + | chr1.4:8141584-8141603 | MS.gene016021:CDS | 40.0% |
| !!! | GCTATTTTTTCCCACTGTTC+TGG | - | chr1.4:8141950-8141969 | None:intergenic | 40.0% |
| !!! | GGAACTTTTGTGCTACTTCA+TGG | + | chr1.4:8141890-8141909 | MS.gene016021:CDS | 40.0% |
| AAAGGATGGAAGGATTTCCC+TGG | + | chr1.4:8143266-8143285 | MS.gene016021:CDS | 45.0% | |
| AAATGCAGCCAAACCCTCAA+TGG | - | chr1.4:8141121-8141140 | None:intergenic | 45.0% | |
| AACCAGTTCCTGAAAGACCT+TGG | - | chr1.4:8141330-8141349 | None:intergenic | 45.0% | |
| AATCCAAGCCAACTGTCTTG+GGG | - | chr1.4:8141580-8141599 | None:intergenic | 45.0% | |
| AATGCAGCCAAACCCTCAAT+GGG | - | chr1.4:8141120-8141139 | None:intergenic | 45.0% | |
| ACTCCAAGAATTGGATCAGG+AGG | - | chr1.4:8140715-8140734 | None:intergenic | 45.0% | |
| ACTCTAATCCACCAGTTCAC+GGG | + | chr1.4:8142850-8142869 | MS.gene016021:CDS | 45.0% | |
| ATTGCAGTATCTCCCCATTG+AGG | + | chr1.4:8141104-8141123 | MS.gene016021:intron | 45.0% | |
| ATTGTTTGAGTCACGTGGCA+TGG | + | chr1.4:8142262-8142281 | MS.gene016021:CDS | 45.0% | |
| CAACACCTTGTTGCAGATTC+CGG | - | chr1.4:8142371-8142390 | None:intergenic | 45.0% | |
| CAACAGGGAAAGCTTAAGCT+TGG | + | chr1.4:8139783-8139802 | MS.gene016021:intron | 45.0% | |
| CAAGCTCAATCTTGGAGTTG+GGG | + | chr1.4:8140768-8140787 | MS.gene016021:CDS | 45.0% | |
| CAGGTATTCACATTTGGCCA+GGG | - | chr1.4:8143301-8143320 | None:intergenic | 45.0% | |
| CAGTGGCAACCTGAGTAAAA+AGG | - | chr1.4:8141306-8141325 | None:intergenic | 45.0% | |
| CTCCAACCCTTTCAGCATAA+AGG | - | chr1.4:8142325-8142344 | None:intergenic | 45.0% | |
| CTCCAGACATCAGATTACCA+GGG | + | chr1.4:8140412-8140431 | MS.gene016021:intron | 45.0% | |
| CTCCAGCTCTCTTTGATGAA+TGG | + | chr1.4:8142901-8142920 | MS.gene016021:CDS | 45.0% | |
| CTGTCTTGGGGTCATAGTAT+CGG | - | chr1.4:8141568-8141587 | None:intergenic | 45.0% | |
| GAAAGTGAAGCAGAGTGTGA+AGG | - | chr1.4:8139667-8139686 | None:intergenic | 45.0% | |
| GCAGAAATGGAAATGATGGC+TGG | + | chr1.4:8142927-8142946 | MS.gene016021:CDS | 45.0% | |
| GGATACAACATGAAACCGGT+GGG | + | chr1.4:8142134-8142153 | MS.gene016021:intron | 45.0% | |
| GGGTTTGGCTGCATTTAACA+AGG | + | chr1.4:8141125-8141144 | MS.gene016021:CDS | 45.0% | |
| GTCAAGCTCAATCTTGGAGT+TGG | + | chr1.4:8140766-8140785 | MS.gene016021:CDS | 45.0% | |
| GTGAGATTGTTTGAGTCACG+TGG | + | chr1.4:8142257-8142276 | MS.gene016021:CDS | 45.0% | |
| TACTATGACCCCAAGACAGT+TGG | + | chr1.4:8141569-8141588 | MS.gene016021:CDS | 45.0% | |
| TGATCCAACACCAGAACAGT+GGG | + | chr1.4:8141937-8141956 | MS.gene016021:CDS | 45.0% | |
| TGGAAGCCTTGATGAAGATG+CGG | + | chr1.4:8142229-8142248 | MS.gene016021:CDS | 45.0% | |
| TGGATACAACATGAAACCGG+TGG | + | chr1.4:8142133-8142152 | MS.gene016021:intron | 45.0% | |
| TTGATCCAACACCAGAACAG+TGG | + | chr1.4:8141936-8141955 | MS.gene016021:CDS | 45.0% | |
| TTGCAGTATCTCCCCATTGA+GGG | + | chr1.4:8141105-8141124 | MS.gene016021:intron | 45.0% | |
| ! | GGTGTTGGATCAATACCAGT+AGG | - | chr1.4:8141929-8141948 | None:intergenic | 45.0% |
| ! | GTCGAGCAAGCCTTTTCAAT+TGG | - | chr1.4:8142824-8142843 | None:intergenic | 45.0% |
| ! | TTTTCCCACTGTTCTGGTGT+TGG | - | chr1.4:8141944-8141963 | None:intergenic | 45.0% |
| !! | TAGTATCGGTACTCAGACCA+TGG | - | chr1.4:8141554-8141573 | None:intergenic | 45.0% |
| !! | TTTTTATAGTCGGCTCCGGA+AGG | + | chr1.4:8141869-8141888 | MS.gene016021:intron | 45.0% |
| !!! | GACAGTTGGCTTGGATTTTG+AGG | + | chr1.4:8141583-8141602 | MS.gene016021:CDS | 45.0% |
| ACCTCGGCCTTTATGCTGAA+AGG | + | chr1.4:8142315-8142334 | MS.gene016021:CDS | 50.0% | |
| ATGCAGCCAAACCCTCAATG+GGG | - | chr1.4:8141119-8141138 | None:intergenic | 50.0% | |
| ATTGGATCAGGAGGAGCCAT+CGG | - | chr1.4:8140706-8140725 | None:intergenic | 50.0% | |
| CAAAGGGGGAGTCAAAAACC+TGG | - | chr1.4:8143076-8143095 | None:intergenic | 50.0% | |
| CACCCTGGTAATCTGATGTC+TGG | - | chr1.4:8140417-8140436 | None:intergenic | 50.0% | |
| CAGAAGCCGCATCTTCATCA+AGG | - | chr1.4:8142238-8142257 | None:intergenic | 50.0% | |
| CATCACCGGAATCTGCAACA+AGG | + | chr1.4:8142363-8142382 | MS.gene016021:CDS | 50.0% | |
| CCAGGTATTCACATTTGGCC+AGG | - | chr1.4:8143302-8143321 | None:intergenic | 50.0% | |
| CCTCCAGACATCAGATTACC+AGG | + | chr1.4:8140411-8140430 | MS.gene016021:intron | 50.0% | |
| CCTCGGCCTTTATGCTGAAA+GGG | + | chr1.4:8142316-8142335 | MS.gene016021:CDS | 50.0% | |
| CCTGGCCAAATGTGAATACC+TGG | + | chr1.4:8143299-8143318 | MS.gene016021:CDS | 50.0% | |
| CCTGGTAATCTGATGTCTGG+AGG | - | chr1.4:8140414-8140433 | None:intergenic | 50.0% | |
| CGAGGGAATTCGTACATCGT+AGG | + | chr1.4:8141474-8141493 | MS.gene016021:intron | 50.0% | |
| CTCTAATCCACCAGTTCACG+GGG | + | chr1.4:8142851-8142870 | MS.gene016021:CDS | 50.0% | |
| GATCCTCGACACCAACATCA+AGG | + | chr1.4:8139687-8139706 | MS.gene016021:CDS | 50.0% | |
| GCAACTGCAGAGTTGTTGCT+CGG | + | chr1.4:8141147-8141166 | MS.gene016021:CDS | 50.0% | |
| GCTCCTCCTGATCCAATTCT+TGG | + | chr1.4:8140709-8140728 | MS.gene016021:CDS | 50.0% | |
| GGAGAGAGGGGAAAACAAAG+AGG | + | chr1.4:8141001-8141020 | MS.gene016021:CDS | 50.0% | |
| GGATGTGCACATAACCCTAC+TGG | + | chr1.4:8141911-8141930 | MS.gene016021:CDS | 50.0% | |
| GGCCTTTATGCTGAAAGGGT+TGG | + | chr1.4:8142320-8142339 | MS.gene016021:CDS | 50.0% | |
| GTATCTCCCCATTGAGGGTT+TGG | + | chr1.4:8141110-8141129 | MS.gene016021:intron | 50.0% | |
| GTCCAAGGTCTTTCAGGAAC+TGG | + | chr1.4:8141325-8141344 | MS.gene016021:CDS | 50.0% | |
| TCAACGATGCTCGAGTACCA+TGG | + | chr1.4:8141534-8141553 | MS.gene016021:CDS | 50.0% | |
| TCCTGAAAGACCTTGGACAG+TGG | - | chr1.4:8141323-8141342 | None:intergenic | 50.0% | |
| TGTTGCAGATTCCGGTGATG+AGG | - | chr1.4:8142363-8142382 | None:intergenic | 50.0% | |
| ! | AGCAGAGTGTGAAGGTACAG+AGG | - | chr1.4:8139659-8139678 | None:intergenic | 50.0% |
| ! | TCGGTTTGAGGGTATACCGA+TGG | + | chr1.4:8140687-8140706 | MS.gene016021:CDS | 50.0% |
| !! | GAACCTTGATGTTGGTGTCG+AGG | - | chr1.4:8139693-8139712 | None:intergenic | 50.0% |
| ACAATCCTAGCCCCGTGAAC+TGG | - | chr1.4:8142864-8142883 | None:intergenic | 55.0% | |
| CACAGGCTTGAACAAGAGCC+AGG | + | chr1.4:8143055-8143074 | MS.gene016021:CDS | 55.0% | |
| CCCTTTCAGCATAAAGGCCG+AGG | - | chr1.4:8142319-8142338 | None:intergenic | 55.0% | |
| CTTAACCCTCCGGTTTCCAG+AGG | - | chr1.4:8140445-8140464 | None:intergenic | 55.0% | |
| GATGGAAGGATTTCCCTGGC+AGG | + | chr1.4:8143270-8143289 | MS.gene016021:CDS | 55.0% | |
| GCCACTGTCCAAGGTCTTTC+AGG | + | chr1.4:8141319-8141338 | MS.gene016021:CDS | 55.0% | |
| GGTTACTGCACGATACCCAC+CGG | - | chr1.4:8142152-8142171 | None:intergenic | 55.0% | |
| GTCATCTGGTCGGATCTGCA+TGG | + | chr1.4:8140645-8140664 | MS.gene016021:intron | 55.0% | |
| TGACCCCAAGACAGTTGGCT+TGG | + | chr1.4:8141574-8141593 | MS.gene016021:CDS | 55.0% | |
| TGGAGTTGGGGCCTACAGAA+CGG | + | chr1.4:8140780-8140799 | MS.gene016021:CDS | 55.0% | |
| ! | ACTCAGGTTGCCACTGTCCA+AGG | + | chr1.4:8141310-8141329 | MS.gene016021:intron | 55.0% |
| ! | CCTTTCCTCTGGAAACCGGA+GGG | + | chr1.4:8140437-8140456 | MS.gene016021:intron | 55.0% |
| ! | GGAACTGGTTCTCTGCGACT+AGG | + | chr1.4:8141340-8141359 | MS.gene016021:CDS | 55.0% |
| ! | GGTGCCTTTCCTCTGGAAAC+CGG | + | chr1.4:8140433-8140452 | MS.gene016021:intron | 55.0% |
| ! | TTACCAGGGTGCCTTTCCTC+TGG | + | chr1.4:8140426-8140445 | MS.gene016021:intron | 55.0% |
| !! | TTTCCAGAGGAAAGGCACCC+TGG | - | chr1.4:8140432-8140451 | None:intergenic | 55.0% |
| ATCCACCAGTTCACGGGGCT+AGG | + | chr1.4:8142856-8142875 | MS.gene016021:CDS | 60.0% | |
| ATCCTAGCCCCGTGAACTGG+TGG | - | chr1.4:8142861-8142880 | None:intergenic | 60.0% | |
| CCCTCCGGTTTCCAGAGGAA+AGG | - | chr1.4:8140440-8140459 | None:intergenic | 60.0% | |
| TTCCCTGGCAGGATTGTCCC+TGG | + | chr1.4:8143281-8143300 | MS.gene016021:CDS | 60.0% | |
| ! | GCCTTTCCTCTGGAAACCGG+AGG | + | chr1.4:8140436-8140455 | MS.gene016021:intron | 60.0% |
| GGCCAGGGACAATCCTGCCA+GGG | - | chr1.4:8143286-8143305 | None:intergenic | 65.0% | |
| TGGCCAGGGACAATCCTGCC+AGG | - | chr1.4:8143287-8143306 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8139634 | 8143359 | 8139634 | ID=MS.gene016021 |
| chr1.4 | mRNA | 8139634 | 8143359 | 8139634 | ID=MS.gene016021.t1;Parent=MS.gene016021 |
| chr1.4 | exon | 8139634 | 8139708 | 8139634 | ID=MS.gene016021.t1.exon1;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8139634 | 8139708 | 8139634 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8139789 | 8139830 | 8139789 | ID=MS.gene016021.t1.exon2;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8139789 | 8139830 | 8139789 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8140646 | 8140840 | 8140646 | ID=MS.gene016021.t1.exon3;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8140646 | 8140840 | 8140646 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8140984 | 8141022 | 8140984 | ID=MS.gene016021.t1.exon4;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8140984 | 8141022 | 8140984 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8141111 | 8141200 | 8141111 | ID=MS.gene016021.t1.exon5;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8141111 | 8141200 | 8141111 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8141316 | 8141424 | 8141316 | ID=MS.gene016021.t1.exon6;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8141316 | 8141424 | 8141316 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8141516 | 8141625 | 8141516 | ID=MS.gene016021.t1.exon7;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8141516 | 8141625 | 8141516 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8141878 | 8142021 | 8141878 | ID=MS.gene016021.t1.exon8;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8141878 | 8142021 | 8141878 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8142218 | 8142384 | 8142218 | ID=MS.gene016021.t1.exon9;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8142218 | 8142384 | 8142218 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8142812 | 8143076 | 8142812 | ID=MS.gene016021.t1.exon10;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8142812 | 8143076 | 8142812 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| chr1.4 | exon | 8143228 | 8143359 | 8143228 | ID=MS.gene016021.t1.exon11;Parent=MS.gene016021.t1 |
| chr1.4 | CDS | 8143228 | 8143359 | 8143228 | ID=cds.MS.gene016021.t1;Parent=MS.gene016021.t1 |
| Gene Sequence |
| Protein sequence |
