Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33167.t1 | prf||1908424A | 99.8 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 1.20E-265 | 925.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33167.t1 | P26563 | 87.9 | 461 | 49 | 1 | 5 | 465 | 1 | 454 | 1.3e-233 | 810.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33167.t1 | A0A072VP26 | 99.8 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 2.4e-265 | 923.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057869 | MS.gene33167 | 0.8352 | 1.93E-56 | -1.69E-46 |
| MS.gene060918 | MS.gene33167 | 0.878411 | 2.87E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33167 | MS.gene031593 | PPI |
| MS.gene33167 | MS.gene40322 | PPI |
| MS.gene006701 | MS.gene33167 | PPI |
| MS.gene33167 | MS.gene014664 | PPI |
| MS.gene33167 | MS.gene031204 | PPI |
| MS.gene33167 | MS.gene75310 | PPI |
| MS.gene33167 | MS.gene045479 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33167.t1 | MTR_1g013050 | 99.785 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 0.0 | 959 |
| MS.gene33167.t1 | MTR_3g110065 | 56.250 | 400 | 173 | 2 | 59 | 457 | 12 | 410 | 7.36e-165 | 471 |
| MS.gene33167.t1 | MTR_3g110065 | 54.436 | 417 | 188 | 2 | 42 | 457 | 35 | 450 | 1.91e-164 | 472 |
| MS.gene33167.t1 | MTR_3g110065 | 54.020 | 398 | 181 | 2 | 42 | 438 | 35 | 431 | 2.90e-156 | 450 |
| MS.gene33167.t1 | MTR_4g080140 | 47.342 | 395 | 206 | 2 | 63 | 457 | 25 | 417 | 1.52e-132 | 389 |
| MS.gene33167.t1 | MTR_4g080130 | 46.212 | 396 | 204 | 4 | 63 | 457 | 20 | 407 | 1.05e-123 | 367 |
| MS.gene33167.t1 | MTR_4g014910 | 96.296 | 54 | 2 | 0 | 334 | 387 | 23 | 76 | 4.72e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33167.t1 | AT4G31990 | 83.149 | 451 | 68 | 2 | 16 | 465 | 10 | 453 | 0.0 | 782 |
| MS.gene33167.t1 | AT4G31990 | 83.149 | 451 | 68 | 2 | 16 | 465 | 10 | 453 | 0.0 | 782 |
| MS.gene33167.t1 | AT4G31990 | 83.073 | 449 | 68 | 2 | 16 | 463 | 10 | 451 | 0.0 | 779 |
| MS.gene33167.t1 | AT4G31990 | 82.040 | 451 | 68 | 3 | 16 | 465 | 10 | 448 | 0.0 | 766 |
| MS.gene33167.t1 | AT5G19550 | 56.061 | 396 | 172 | 2 | 63 | 457 | 3 | 397 | 1.76e-164 | 470 |
| MS.gene33167.t1 | AT5G11520 | 54.225 | 426 | 188 | 4 | 35 | 457 | 20 | 441 | 1.24e-162 | 467 |
| MS.gene33167.t1 | AT1G62800 | 52.062 | 388 | 184 | 2 | 71 | 457 | 11 | 397 | 1.30e-146 | 424 |
| MS.gene33167.t1 | AT1G62800 | 52.196 | 387 | 183 | 2 | 71 | 457 | 11 | 395 | 1.79e-146 | 424 |
| MS.gene33167.t1 | AT2G30970 | 49.620 | 395 | 197 | 2 | 63 | 457 | 31 | 423 | 4.01e-139 | 406 |
| MS.gene33167.t1 | AT2G30970 | 49.620 | 395 | 197 | 2 | 63 | 457 | 31 | 423 | 4.01e-139 | 406 |
| MS.gene33167.t1 | AT1G62800 | 51.376 | 327 | 158 | 1 | 71 | 396 | 11 | 337 | 1.74e-122 | 361 |
Find 118 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAACTTCTCCAATTTA+AGG | 0.097948 | 1.3:+8763930 | MS.gene33167:CDS |
| GCCACTGTCCAAGGTCTTTC+AGG | 0.182756 | 1.3:+8765477 | MS.gene33167:CDS |
| CAACACCTTGTTGCGGATTC+TGG | 0.216097 | 1.3:-8766523 | None:intergenic |
| CGCTATACACACCCTTAAAT+TGG | 0.219860 | 1.3:-8763942 | None:intergenic |
| TGTGCTTAATGTTGTGAAAA+AGG | 0.302533 | 1.3:+8764980 | MS.gene33167:CDS |
| ACTCTTTGCTGTTTGATTGC+TGG | 0.307680 | 1.3:-8765338 | None:intergenic |
| AAATCCAAGCCAACCGTCTT+GGG | 0.329247 | 1.3:-8765736 | None:intergenic |
| GCTCCTCCTGATCCAATTCT+TGG | 0.345870 | 1.3:+8764870 | MS.gene33167:CDS |
| GCTTCAGAAACTCCAAGAAT+TGG | 0.355675 | 1.3:-8764882 | None:intergenic |
| AGGATTGTTGCTAATATTGT+TGG | 0.362974 | 1.3:+8766984 | MS.gene33167:CDS |
| TTCACAACATTAAGCACATA+TGG | 0.368331 | 1.3:-8764975 | None:intergenic |
| CTCCAACCCTTTCAGCATAA+AGG | 0.377297 | 1.3:-8766477 | None:intergenic |
| CAACAACTTCTCCAATTTAA+GGG | 0.377921 | 1.3:+8763931 | MS.gene33167:CDS |
| CTGTTGCGACTAATGTTTCT+CGG | 0.378388 | 1.3:+8764829 | MS.gene33167:CDS |
| GACTAATGTTTCTCGGTTTG+AGG | 0.382204 | 1.3:+8764836 | MS.gene33167:CDS |
| ATCTGCAAGGTATTCACATT+TGG | 0.389303 | 1.3:-8767414 | None:intergenic |
| GTATCTCCCCATCGAGGGTT+TGG | 0.390367 | 1.3:+8765268 | MS.gene33167:intron |
| GTCCAAGGTCTTTCAGGAAC+TGG | 0.391375 | 1.3:+8765483 | MS.gene33167:CDS |
| TCAAGCTCAATCTTGGAGTT+GGG | 0.403543 | 1.3:+8764928 | MS.gene33167:CDS |
| CACGGGCTTGAACAAGAGCC+AGG | 0.407205 | 1.3:+8767163 | MS.gene33167:CDS |
| GGATTGTTGCTAATATTGTT+GGG | 0.416631 | 1.3:+8766985 | MS.gene33167:CDS |
| GGGCATGATAGAAGATATAA+AGG | 0.426415 | 1.3:+8765762 | MS.gene33167:CDS |
| AGCGATGTCAAGCTCAATCT+TGG | 0.430594 | 1.3:+8764921 | MS.gene33167:CDS |
| TGATGAATGGAAAGCAGAAA+TGG | 0.440679 | 1.3:+8767022 | MS.gene33167:CDS |
| AAAATCCAAGCCAACCGTCT+TGG | 0.459473 | 1.3:-8765737 | None:intergenic |
| ACTAATGTTTCTCGGTTTGA+GGG | 0.459873 | 1.3:+8764837 | MS.gene33167:CDS |
| CTCCAGCTCTCTTTGATGAA+TGG | 0.460717 | 1.3:+8767009 | MS.gene33167:CDS |
| TCATTCATACTTAAGCAGAT+AGG | 0.464525 | 1.3:+8767128 | MS.gene33167:CDS |
| ACAATCCTAGCCCCGTGAAC+TGG | 0.466986 | 1.3:-8766969 | None:intergenic |
| GGGTAAAGAGTCAATTGAAA+AGG | 0.468824 | 1.3:+8766919 | MS.gene33167:intron |
| GTCAAGCTCAATCTTGGAGT+TGG | 0.472512 | 1.3:+8764927 | MS.gene33167:CDS |
| CCTCGGCCTTTATGCTGAAA+GGG | 0.475126 | 1.3:+8766471 | MS.gene33167:CDS |
| ACCTCGGCCTTTATGCTGAA+AGG | 0.476101 | 1.3:+8766470 | MS.gene33167:CDS |
| GATAGGCATGTTCTCATTCA+CGG | 0.476276 | 1.3:+8767145 | MS.gene33167:CDS |
| GGTTTGAGATTTAACAATGA+AGG | 0.481806 | 1.3:+8763905 | MS.gene33167:CDS |
| TGACCCCAAGACGGTTGGCT+TGG | 0.482318 | 1.3:+8765732 | MS.gene33167:CDS |
| TTCCATTCATCAAAGAGAGC+TGG | 0.483532 | 1.3:-8767011 | None:intergenic |
| ACTCAGGTTGCCACTGTCCA+AGG | 0.484927 | 1.3:+8765468 | MS.gene33167:intron |
| CAACAGGGAAAGCTTAAGCT+TGG | 0.488113 | 1.3:+8763875 | MS.gene33167:intron |
| ATTTCTTCAAAAGACAAAAG+TGG | 0.499207 | 1.3:+8767095 | MS.gene33167:CDS |
| GGCCTTTATGCTGAAAGGGT+TGG | 0.499920 | 1.3:+8766475 | MS.gene33167:CDS |
| GTCATCTGGTCGGATCTGTA+TGG | 0.500187 | 1.3:+8764806 | MS.gene33167:intron |
| GAAACTCCAAGAATTGGATC+AGG | 0.502800 | 1.3:-8764876 | None:intergenic |
| TACTCTAATCCACCAGTTCA+CGG | 0.502971 | 1.3:+8766957 | MS.gene33167:CDS |
| ATTGTTAAATCTCAAACCGT+TGG | 0.504072 | 1.3:-8763900 | None:intergenic |
| TTCCCTGGCAGGATTGTCGT+TGG | 0.504820 | 1.3:+8767391 | MS.gene33167:CDS |
| TTGTAGTTCTTCCGTTCTGT+AGG | 0.509216 | 1.3:-8764952 | None:intergenic |
| TTAGGCAGAAAATCTTATGC+TGG | 0.512452 | 1.3:+8765138 | MS.gene33167:intron |
| TTCAAAAGACAAAAGTGGAA+AGG | 0.512714 | 1.3:+8767100 | MS.gene33167:CDS |
| ATAGGCATGTTCTCATTCAC+GGG | 0.515655 | 1.3:+8767146 | MS.gene33167:CDS |
| GAAAATCTTATGCTGGAGAG+AGG | 0.523108 | 1.3:+8765145 | MS.gene33167:CDS |
| CATATATACATGACAAAGGA+TGG | 0.524159 | 1.3:+8767362 | MS.gene33167:CDS |
| ATCCACCAGTTCACGGGGCT+AGG | 0.527581 | 1.3:+8766964 | MS.gene33167:CDS |
| TGTTTATTCAGTCATCTGGT+CGG | 0.530552 | 1.3:+8764796 | MS.gene33167:intron |
| GAAAGCAGAAATGGAAATGA+TGG | 0.532291 | 1.3:+8767031 | MS.gene33167:CDS |
| ACTCTAATCCACCAGTTCAC+GGG | 0.533141 | 1.3:+8766958 | MS.gene33167:CDS |
| ATTGGATCAGGAGGAGCCAT+TGG | 0.533152 | 1.3:-8764864 | None:intergenic |
| TGGCCAACGACAATCCTGCC+AGG | 0.534470 | 1.3:-8767394 | None:intergenic |
| TCGGTTTGAGGGTATACCAA+TGG | 0.538038 | 1.3:+8764848 | MS.gene33167:CDS |
| AGTAGCACAAAAGTTCCTTC+CGG | 0.540828 | 1.3:-8766039 | None:intergenic |
| AAGACAAAAGTGGAAAGGAT+TGG | 0.543794 | 1.3:+8767105 | MS.gene33167:CDS |
| AAAATCTTATGCTGGAGAGA+GGG | 0.546257 | 1.3:+8765146 | MS.gene33167:CDS |
| GGATGTGCACATAACCCTAC+TGG | 0.546697 | 1.3:+8766066 | MS.gene33167:CDS |
| CCCTTTCAGCATAAAGGCCG+AGG | 0.547062 | 1.3:-8766471 | None:intergenic |
| GTGACAATATGACAAATAAG+TGG | 0.547417 | 1.3:+8767339 | MS.gene33167:CDS |
| AATGCAGCCAAACCCTCGAT+GGG | 0.548284 | 1.3:-8765275 | None:intergenic |
| GATCCTCGACACCAACATCA+AGG | 0.554684 | 1.3:+8763773 | MS.gene33167:CDS |
| GCAGAAATGGAAATGATGGC+TGG | 0.555365 | 1.3:+8767035 | MS.gene33167:CDS |
| ATCCTAGCCCCGTGAACTGG+TGG | 0.557228 | 1.3:-8766966 | None:intergenic |
| GGAACTGGTTCTCTGCGACT+AGG | 0.557349 | 1.3:+8765498 | MS.gene33167:CDS |
| CAAGCTCAATCTTGGAGTTG+GGG | 0.560345 | 1.3:+8764929 | MS.gene33167:CDS |
| AACCAGTTCCTGAAAGACCT+TGG | 0.562935 | 1.3:-8765485 | None:intergenic |
| GGGTTTGGCTGCATTTAACA+AGG | 0.565169 | 1.3:+8765283 | MS.gene33167:CDS |
| AAATGCAGCCAAACCCTCGA+TGG | 0.566671 | 1.3:-8765276 | None:intergenic |
| TACTATGACCCCAAGACGGT+TGG | 0.567207 | 1.3:+8765727 | MS.gene33167:CDS |
| AAGCTTAAGCTTGGAACCAA+CGG | 0.575244 | 1.3:+8763884 | MS.gene33167:CDS |
| GGTGTTGGATCAATACCAGT+AGG | 0.577041 | 1.3:-8766081 | None:intergenic |
| TCCTGAAAGACCTTGGACAG+TGG | 0.583931 | 1.3:-8765478 | None:intergenic |
| CCGTCTTGGGGTCATAGTAT+CGG | 0.584700 | 1.3:-8765723 | None:intergenic |
| GATGGAAGGATTTCCCTGGC+AGG | 0.584781 | 1.3:+8767380 | MS.gene33167:CDS |
| AAATCTTATGCTGGAGAGAG+GGG | 0.586075 | 1.3:+8765147 | MS.gene33167:CDS |
| TAATTTACAACACCTTGTTG+CGG | 0.589235 | 1.3:-8766530 | None:intergenic |
| CAGAAGCCGCATCTTCGTCA+AGG | 0.591253 | 1.3:-8766390 | None:intergenic |
| TGATCCAACACCAGAGCAGT+GGG | 0.592941 | 1.3:+8766092 | MS.gene33167:CDS |
| AAAGGATGGAAGGATTTCCC+TGG | 0.594526 | 1.3:+8767376 | MS.gene33167:CDS |
| TGGAGTTGGGGCCTACAGAA+CGG | 0.598254 | 1.3:+8764941 | MS.gene33167:CDS |
| ATTGTTTGTATCACGTGGCA+TGG | 0.598987 | 1.3:+8766417 | MS.gene33167:CDS |
| TTGCAGTATCTCCCCATCGA+GGG | 0.600855 | 1.3:+8765263 | MS.gene33167:intron |
| TATACATGACAAAGGATGGA+AGG | 0.601628 | 1.3:+8767366 | MS.gene33167:CDS |
| CATACACAGAACCTTGATGT+TGG | 0.601911 | 1.3:-8763784 | None:intergenic |
| AATCCAAGCCAACCGTCTTG+GGG | 0.602261 | 1.3:-8765735 | None:intergenic |
| CTCTAATCCACCAGTTCACG+GGG | 0.602639 | 1.3:+8766959 | MS.gene33167:CDS |
| AGCAGAGTGTGAAGGTACAG+AGG | 0.602814 | 1.3:-8763742 | None:intergenic |
| AAATGGAAATGATGGCTGGA+AGG | 0.603044 | 1.3:+8767039 | MS.gene33167:CDS |
| GCAACTGCAGAGTTGTTGCT+CGG | 0.605597 | 1.3:+8765305 | MS.gene33167:CDS |
| TTGATCCAACACCAGAGCAG+TGG | 0.610585 | 1.3:+8766091 | MS.gene33167:CDS |
| TAGTATCGGTACTCAGACCA+TGG | 0.615683 | 1.3:-8765709 | None:intergenic |
| ACTCCAAGAATTGGATCAGG+AGG | 0.616716 | 1.3:-8764873 | None:intergenic |
| GAACCTTGATGTTGGTGTCG+AGG | 0.620995 | 1.3:-8763776 | None:intergenic |
| TGGAAGCCTTGACGAAGATG+CGG | 0.621669 | 1.3:+8766384 | MS.gene33167:CDS |
| TCAACGATGCTCGAGTACCA+TGG | 0.630826 | 1.3:+8765692 | MS.gene33167:CDS |
| GGCCAACGACAATCCTGCCA+GGG | 0.633517 | 1.3:-8767393 | None:intergenic |
| TTTGATATCAAATCCTACGT+GGG | 0.636065 | 1.3:+8765560 | MS.gene33167:CDS |
| CATCACCAGAATCCGCAACA+AGG | 0.636998 | 1.3:+8766518 | MS.gene33167:CDS |
| GTGTTGGATCAATACCAGTA+GGG | 0.638468 | 1.3:-8766080 | None:intergenic |
| TTGATATCAAATCCTACGTG+GGG | 0.645817 | 1.3:+8765561 | MS.gene33167:CDS |
| GTGAGATTGTTTGTATCACG+TGG | 0.647083 | 1.3:+8766412 | MS.gene33167:CDS |
| AATCGATAATAGCATCTGCA+AGG | 0.649306 | 1.3:-8767427 | None:intergenic |
| GAAAGTGAAGCAGAGTGTGA+AGG | 0.650101 | 1.3:-8763750 | None:intergenic |
| GTGGCATATATACATGACAA+AGG | 0.654355 | 1.3:+8767358 | MS.gene33167:CDS |
| ACTGGTGGATTAGAGTACAT+TGG | 0.674716 | 1.3:-8766951 | None:intergenic |
| GTTTGTATCACGTGGCATGG+AGG | 0.678811 | 1.3:+8766420 | MS.gene33167:CDS |
| GGAGAGAGGGGAAAACAAAG+AGG | 0.684124 | 1.3:+8765159 | MS.gene33167:CDS |
| TGTTGCGGATTCTGGTGATG+AGG | 0.691553 | 1.3:-8766515 | None:intergenic |
| ATTGCAGTATCTCCCCATCG+AGG | 0.694670 | 1.3:+8765262 | MS.gene33167:intron |
| CCGATACTATGACCCCAAGA+CGG | 0.704756 | 1.3:+8765723 | MS.gene33167:CDS |
| ATGCAGCCAAACCCTCGATG+GGG | 0.723215 | 1.3:-8765274 | None:intergenic |
| ATAAAATTCACACCCCACGT+AGG | 0.732753 | 1.3:-8765573 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAATCATACTTTTTATA+TGG | + | chr1.3:8765815-8765834 | MS.gene33167:intron | 10.0% |
| !!! | ATTAATCATACTTTTTATAT+GGG | + | chr1.3:8765816-8765835 | MS.gene33167:intron | 10.0% |
| !! | ATTTCTTTATGATCAATTTA+AGG | + | chr1.3:8764021-8764040 | MS.gene33167:intron | 15.0% |
| !! | TAATTTCACTTTCTAAATAA+TGG | - | chr1.3:8765800-8765819 | None:intergenic | 15.0% |
| !! | TATAAAAGAGAAAAATCAAA+GGG | - | chr1.3:8767200-8767219 | None:intergenic | 15.0% |
| !! | TTTCTTTATGATCAATTTAA+GGG | + | chr1.3:8764022-8764041 | MS.gene33167:intron | 15.0% |
| !!! | CTATTTTTTTAGTAAATTTG+TGG | + | chr1.3:8766200-8766219 | MS.gene33167:intron | 15.0% |
| !!! | TGTTTTACATTTTTTATAGT+CGG | + | chr1.3:8766014-8766033 | MS.gene33167:intron | 15.0% |
| !!! | TTTAAAATTGCAATTGAAAT+TGG | + | chr1.3:8764695-8764714 | MS.gene33167:intron | 15.0% |
| !! | ATAAAAGAGAAAAATCAAAG+GGG | - | chr1.3:8767199-8767218 | None:intergenic | 20.0% |
| !! | GTATAAAAGAGAAAAATCAA+AGG | - | chr1.3:8767201-8767220 | None:intergenic | 20.0% |
| !! | TGATTAAGTCAATCATAAAT+AGG | - | chr1.3:8763830-8763849 | None:intergenic | 20.0% |
| !!! | TACAATTCTAATCTAAAGTA+AGG | - | chr1.3:8764412-8764431 | None:intergenic | 20.0% |
| !!! | TTGATGAAATTCTTGTTTTT+AGG | + | chr1.3:8765120-8765139 | MS.gene33167:intron | 20.0% |
| !!! | TTTAAAATTGCTATTCAAAG+TGG | + | chr1.3:8764279-8764298 | MS.gene33167:intron | 20.0% |
| ! | AACTATTCTTTGATCCATTA+TGG | - | chr1.3:8764676-8764695 | None:intergenic | 25.0% |
| ! | ACTCATATTATATGTTGCTA+GGG | - | chr1.3:8767249-8767268 | None:intergenic | 25.0% |
| ! | ATTAGAATTGTAAAACCAAG+TGG | + | chr1.3:8764420-8764439 | MS.gene33167:intron | 25.0% |
| ! | ATTTCTTCAAAAGACAAAAG+TGG | + | chr1.3:8767095-8767114 | MS.gene33167:CDS | 25.0% |
| ! | GATGATTACTATGTATTTCA+GGG | + | chr1.3:8766899-8766918 | MS.gene33167:intron | 25.0% |
| ! | GCAATTGAAATTGGTTAATT+AGG | + | chr1.3:8764704-8764723 | MS.gene33167:intron | 25.0% |
| ! | TAAGAAATCAATACATGACA+CGG | - | chr1.3:8765044-8765063 | None:intergenic | 25.0% |
| ! | TACTCATATTATATGTTGCT+AGG | - | chr1.3:8767250-8767269 | None:intergenic | 25.0% |
| ! | TATATCGTGAAATAGATTCA+AGG | - | chr1.3:8766328-8766347 | None:intergenic | 25.0% |
| ! | TGATGATTACTATGTATTTC+AGG | + | chr1.3:8766898-8766917 | MS.gene33167:intron | 25.0% |
| ! | TTCAAATGTTTCGTTTAAGA+AGG | + | chr1.3:8766798-8766817 | MS.gene33167:intron | 25.0% |
| ! | TTGGTTAATTAGGATTTAAG+AGG | + | chr1.3:8764714-8764733 | MS.gene33167:intron | 25.0% |
| ! | TTTATCAATCAAGAGTCATA+GGG | + | chr1.3:8766648-8766667 | MS.gene33167:intron | 25.0% |
| !! | ACAAAGAGGTAATTTTCTTT+AGG | + | chr1.3:8765173-8765192 | MS.gene33167:intron | 25.0% |
| !! | TCTTTGTTATATCTTCTGTT+TGG | + | chr1.3:8767311-8767330 | MS.gene33167:intron | 25.0% |
| !! | TGTGAATTTTATTCCTTTCT+CGG | + | chr1.3:8765584-8765603 | MS.gene33167:intron | 25.0% |
| !! | TTTTATCAATCAAGAGTCAT+AGG | + | chr1.3:8766647-8766666 | MS.gene33167:intron | 25.0% |
| !!! | ATTTTGTTTATTCAGTCATC+TGG | + | chr1.3:8764792-8764811 | MS.gene33167:intron | 25.0% |
| !!! | GTTTTTGTTTTCATTCAACA+GGG | + | chr1.3:8763860-8763879 | MS.gene33167:intron | 25.0% |
| !!! | TCTTATTTTTGTGTCCATAA+TGG | + | chr1.3:8764659-8764678 | MS.gene33167:intron | 25.0% |
| !!! | TGTTTTTGTTTTCATTCAAC+AGG | + | chr1.3:8763859-8763878 | MS.gene33167:intron | 25.0% |
| AACTGCTCGTTAAAAATTTC+AGG | + | chr1.3:8766351-8766370 | MS.gene33167:intron | 30.0% | |
| AAGAAATCAATACATGACAC+GGG | - | chr1.3:8765043-8765062 | None:intergenic | 30.0% | |
| AAGATCATTTCAACTCATTC+AGG | - | chr1.3:8766760-8766779 | None:intergenic | 30.0% | |
| AATTAGAACATTCATGCAGT+TGG | + | chr1.3:8765972-8765991 | MS.gene33167:intron | 30.0% | |
| ACTGCTCGTTAAAAATTTCA+GGG | + | chr1.3:8766352-8766371 | MS.gene33167:intron | 30.0% | |
| AGAGTTAACAAGTTAACATC+AGG | - | chr1.3:8764637-8764656 | None:intergenic | 30.0% | |
| AGGATTGTTGCTAATATTGT+TGG | + | chr1.3:8766984-8767003 | MS.gene33167:CDS | 30.0% | |
| ATTGTTAAATCTCAAACCGT+TGG | - | chr1.3:8763903-8763922 | None:intergenic | 30.0% | |
| CAACAACTTCTCCAATTTAA+GGG | + | chr1.3:8763931-8763950 | MS.gene33167:CDS | 30.0% | |
| CAACATCAAAAAATGGAAAG+TGG | - | chr1.3:8766149-8766168 | None:intergenic | 30.0% | |
| CATATATACATGACAAAGGA+TGG | + | chr1.3:8767362-8767381 | MS.gene33167:CDS | 30.0% | |
| CCATTTATGCACACAAAAAT+TGG | - | chr1.3:8764246-8764265 | None:intergenic | 30.0% | |
| GGATTGTTGCTAATATTGTT+GGG | + | chr1.3:8766985-8767004 | MS.gene33167:CDS | 30.0% | |
| GTGACAATATGACAAATAAG+TGG | + | chr1.3:8767339-8767358 | MS.gene33167:CDS | 30.0% | |
| GTTAATTAGGATTTAAGAGG+TGG | + | chr1.3:8764717-8764736 | MS.gene33167:intron | 30.0% | |
| TAATTTACAACACCTTGTTG+CGG | - | chr1.3:8766533-8766552 | None:intergenic | 30.0% | |
| TACTATAGCATACATTGCAT+TGG | - | chr1.3:8766847-8766866 | None:intergenic | 30.0% | |
| TCAACAACTTCTCCAATTTA+AGG | + | chr1.3:8763930-8763949 | MS.gene33167:CDS | 30.0% | |
| TCATTCATACTTAAGCAGAT+AGG | + | chr1.3:8767128-8767147 | MS.gene33167:CDS | 30.0% | |
| TGGTAAGCAACATCAAAAAA+TGG | - | chr1.3:8766156-8766175 | None:intergenic | 30.0% | |
| TGTGCTTAATGTTGTGAAAA+AGG | + | chr1.3:8764980-8764999 | MS.gene33167:CDS | 30.0% | |
| TTCAAAAGACAAAAGTGGAA+AGG | + | chr1.3:8767100-8767119 | MS.gene33167:CDS | 30.0% | |
| TTCACAACATTAAGCACATA+TGG | - | chr1.3:8764978-8764997 | None:intergenic | 30.0% | |
| TTTGATATCAAATCCTACGT+GGG | + | chr1.3:8765560-8765579 | MS.gene33167:CDS | 30.0% | |
| ! | AAAATGTAATTTTCAGCTCG+AGG | + | chr1.3:8764156-8764175 | MS.gene33167:intron | 30.0% |
| ! | AAATGTAATTTTCAGCTCGA+GGG | + | chr1.3:8764157-8764176 | MS.gene33167:intron | 30.0% |
| ! | CCAATTTTTGTGTGCATAAA+TGG | + | chr1.3:8764243-8764262 | MS.gene33167:intron | 30.0% |
| ! | GGTTTGAGATTTAACAATGA+AGG | + | chr1.3:8763905-8763924 | MS.gene33167:CDS | 30.0% |
| ! | TAGGGAATAAATTTTACGAC+AGG | + | chr1.3:8766666-8766685 | MS.gene33167:intron | 30.0% |
| ! | TGAATTCTGATTCCTTTTCT+AGG | + | chr1.3:8766609-8766628 | MS.gene33167:intron | 30.0% |
| ! | TTATTGACTGTGATTTCACT+TGG | + | chr1.3:8765238-8765257 | MS.gene33167:intron | 30.0% |
| ! | TTTAGTTCATCTTGTAGTGA+AGG | + | chr1.3:8765915-8765934 | MS.gene33167:intron | 30.0% |
| ! | TTTTGATATCAAATCCTACG+TGG | + | chr1.3:8765559-8765578 | MS.gene33167:CDS | 30.0% |
| !! | CACTTTCTAAATAATGGATG+AGG | - | chr1.3:8765794-8765813 | None:intergenic | 30.0% |
| !!! | ATTTTTTGATGTTGCTTACC+AGG | + | chr1.3:8766155-8766174 | MS.gene33167:CDS | 30.0% |
| !!! | GGATTTTTTTTTGTGTGAAC+TGG | - | chr1.3:8764204-8764223 | None:intergenic | 30.0% |
| !!! | TTATTTTTGTCTTAACCCTC+CGG | - | chr1.3:8764591-8764610 | None:intergenic | 30.0% |
| AAAATCTTATGCTGGAGAGA+GGG | + | chr1.3:8765146-8765165 | MS.gene33167:CDS | 35.0% | |
| AAACCTTACAACGAATGAAG+CGG | + | chr1.3:8766268-8766287 | MS.gene33167:intron | 35.0% | |
| AAGACAAAAGTGGAAAGGAT+TGG | + | chr1.3:8767105-8767124 | MS.gene33167:CDS | 35.0% | |
| AAGGATAAAAACTGTTAGGC+AGG | + | chr1.3:8767058-8767077 | MS.gene33167:CDS | 35.0% | |
| AATCGATAATAGCATCTGCA+AGG | - | chr1.3:8767430-8767449 | None:intergenic | 35.0% | |
| ACACGCAATGAAATTGATCA+GGG | - | chr1.3:8764751-8764770 | None:intergenic | 35.0% | |
| ATGAAATTGATCAGGGTAGT+AGG | - | chr1.3:8764744-8764763 | None:intergenic | 35.0% | |
| ATTCCTTTCTCGGTTTAACT+TGG | + | chr1.3:8765594-8765613 | MS.gene33167:intron | 35.0% | |
| CAGTCATACAGTAAAAACCT+CGG | + | chr1.3:8766454-8766473 | MS.gene33167:CDS | 35.0% | |
| CTATAGTAAACGTTCTGTCT+TGG | + | chr1.3:8766859-8766878 | MS.gene33167:intron | 35.0% | |
| CTGGAAGGATAAAAACTGTT+AGG | + | chr1.3:8767054-8767073 | MS.gene33167:CDS | 35.0% | |
| GAAAGCAGAAATGGAAATGA+TGG | + | chr1.3:8767031-8767050 | MS.gene33167:CDS | 35.0% | |
| GAATTGTAAAACCAAGTGGT+TGG | + | chr1.3:8764424-8764443 | MS.gene33167:intron | 35.0% | |
| GATCAACAATTGTTTCAGTC+AGG | - | chr1.3:8764509-8764528 | None:intergenic | 35.0% | |
| GGAACATAATTAACAACAGC+TGG | - | chr1.3:8764225-8764244 | None:intergenic | 35.0% | |
| GGGCATGATAGAAGATATAA+AGG | + | chr1.3:8765762-8765781 | MS.gene33167:CDS | 35.0% | |
| GGGTAAAGAGTCAATTGAAA+AGG | + | chr1.3:8766919-8766938 | MS.gene33167:intron | 35.0% | |
| GGTCATGATATTTGTTTCGA+GGG | + | chr1.3:8765615-8765634 | MS.gene33167:intron | 35.0% | |
| GTGAATTCATGTTCTTCTGT+TGG | - | chr1.3:8765941-8765960 | None:intergenic | 35.0% | |
| GTGGCATATATACATGACAA+AGG | + | chr1.3:8767358-8767377 | MS.gene33167:CDS | 35.0% | |
| TATACATGACAAAGGATGGA+AGG | + | chr1.3:8767366-8767385 | MS.gene33167:CDS | 35.0% | |
| TCAACTGAAAAAATAGCCTC+AGG | - | chr1.3:8765087-8765106 | None:intergenic | 35.0% | |
| TGATGAATGGAAAGCAGAAA+TGG | + | chr1.3:8767022-8767041 | MS.gene33167:CDS | 35.0% | |
| TGGTCATGATATTTGTTTCG+AGG | + | chr1.3:8765614-8765633 | MS.gene33167:intron | 35.0% | |
| TGTTTATTCAGTCATCTGGT+CGG | + | chr1.3:8764796-8764815 | MS.gene33167:intron | 35.0% | |
| TTAGGCAGAAAATCTTATGC+TGG | + | chr1.3:8765138-8765157 | MS.gene33167:intron | 35.0% | |
| TTGATATCAAATCCTACGTG+GGG | + | chr1.3:8765561-8765580 | MS.gene33167:CDS | 35.0% | |
| TTTACCAAAGATTGTGTACC+TGG | - | chr1.3:8766176-8766195 | None:intergenic | 35.0% | |
| ! | AAACAGCAAAGAGTATGTAG+TGG | + | chr1.3:8765347-8765366 | MS.gene33167:intron | 35.0% |
| ! | AAATTTCAGGGTTTTGCTAG+TGG | + | chr1.3:8766364-8766383 | MS.gene33167:intron | 35.0% |
| ! | ACTAATGTTTCTCGGTTTGA+GGG | + | chr1.3:8764837-8764856 | MS.gene33167:CDS | 35.0% |
| ! | AGGTAACATTTTTGTCTTGC+AGG | + | chr1.3:8765652-8765671 | MS.gene33167:intron | 35.0% |
| ! | ATCTGCAAGGTATTCACATT+TGG | - | chr1.3:8767417-8767436 | None:intergenic | 35.0% |
| ! | CTGATAGAACGATATTTTCC+TGG | + | chr1.3:8765528-8765547 | MS.gene33167:CDS | 35.0% |
| ! | GATATCAAAACTTTTGCTCC+AGG | - | chr1.3:8765549-8765568 | None:intergenic | 35.0% |
| ! | TTCTGATTCCTTTTCTAGGT+AGG | + | chr1.3:8766613-8766632 | MS.gene33167:intron | 35.0% |
| ! | TTTCTCTCTCCTTTTTACTC+AGG | + | chr1.3:8765452-8765471 | MS.gene33167:intron | 35.0% |
| ! | TTTTACGACAGGCATTTTGT+AGG | + | chr1.3:8766677-8766696 | MS.gene33167:intron | 35.0% |
| !!! | ACATTTTTTATAGTCGGCTC+CGG | + | chr1.3:8766020-8766039 | MS.gene33167:intron | 35.0% |
| AAATCTTATGCTGGAGAGAG+GGG | + | chr1.3:8765147-8765166 | MS.gene33167:CDS | 40.0% | |
| AAATGGAAATGATGGCTGGA+AGG | + | chr1.3:8767039-8767058 | MS.gene33167:CDS | 40.0% | |
| AAGCTTAAGCTTGGAACCAA+CGG | + | chr1.3:8763884-8763903 | MS.gene33167:CDS | 40.0% | |
| AATTGCTTGATCCAACCACT+TGG | - | chr1.3:8764438-8764457 | None:intergenic | 40.0% | |
| ACTTCTTGTTCAGAAACCTG+AGG | + | chr1.3:8765068-8765087 | MS.gene33167:intron | 40.0% | |
| AGTAGCACAAAAGTTCCTTC+CGG | - | chr1.3:8766042-8766061 | None:intergenic | 40.0% | |
| AGTCAGACTTTACATACCTC+CGG | + | chr1.3:8764531-8764550 | MS.gene33167:intron | 40.0% | |
| ATAAAATTCACACCCCACGT+AGG | - | chr1.3:8765576-8765595 | None:intergenic | 40.0% | |
| ATAGGCATGTTCTCATTCAC+GGG | + | chr1.3:8767146-8767165 | MS.gene33167:CDS | 40.0% | |
| ATCCTTCACCTACCTAGAAA+AGG | - | chr1.3:8766624-8766643 | None:intergenic | 40.0% | |
| ATTGTTTGTATCACGTGGCA+TGG | + | chr1.3:8766417-8766436 | MS.gene33167:CDS | 40.0% | |
| CACACGCAATGAAATTGATC+AGG | - | chr1.3:8764752-8764771 | None:intergenic | 40.0% | |
| CATACACAGAACCTTGATGT+TGG | - | chr1.3:8763787-8763806 | None:intergenic | 40.0% | |
| CGCTATACACACCCTTAAAT+TGG | - | chr1.3:8763945-8763964 | None:intergenic | 40.0% | |
| CTGTTGCGACTAATGTTTCT+CGG | + | chr1.3:8764829-8764848 | MS.gene33167:CDS | 40.0% | |
| CTTACCAGGTACACAATCTT+TGG | + | chr1.3:8766169-8766188 | MS.gene33167:intron | 40.0% | |
| GAAAATCTTATGCTGGAGAG+AGG | + | chr1.3:8765145-8765164 | MS.gene33167:CDS | 40.0% | |
| GAAACTCCAAGAATTGGATC+AGG | - | chr1.3:8764879-8764898 | None:intergenic | 40.0% | |
| GATAGGCATGTTCTCATTCA+CGG | + | chr1.3:8767145-8767164 | MS.gene33167:CDS | 40.0% | |
| GCTTCAGAAACTCCAAGAAT+TGG | - | chr1.3:8764885-8764904 | None:intergenic | 40.0% | |
| GGTTACTGTACGATATCTAC+CGG | - | chr1.3:8766307-8766326 | None:intergenic | 40.0% | |
| GTGAGATTGTTTGTATCACG+TGG | + | chr1.3:8766412-8766431 | MS.gene33167:CDS | 40.0% | |
| GTGGTTGGATCAAGCAATTA+AGG | + | chr1.3:8764439-8764458 | MS.gene33167:intron | 40.0% | |
| GTGTTGGATCAATACCAGTA+GGG | - | chr1.3:8766083-8766102 | None:intergenic | 40.0% | |
| GTTGCTAGGGTCAAAGAAAT+AGG | - | chr1.3:8767236-8767255 | None:intergenic | 40.0% | |
| TACTCTAATCCACCAGTTCA+CGG | + | chr1.3:8766957-8766976 | MS.gene33167:CDS | 40.0% | |
| TATCCGCTTCATTCGTTGTA+AGG | - | chr1.3:8766274-8766293 | None:intergenic | 40.0% | |
| TCAAGCTCAATCTTGGAGTT+GGG | + | chr1.3:8764928-8764947 | MS.gene33167:CDS | 40.0% | |
| TGACCAAGTTAAACCGAGAA+AGG | - | chr1.3:8765600-8765619 | None:intergenic | 40.0% | |
| TTCCATTCATCAAAGAGAGC+TGG | - | chr1.3:8767014-8767033 | None:intergenic | 40.0% | |
| TTGTAGTTCTTCCGTTCTGT+AGG | - | chr1.3:8764955-8764974 | None:intergenic | 40.0% | |
| ! | GACTAATGTTTCTCGGTTTG+AGG | + | chr1.3:8764836-8764855 | MS.gene33167:CDS | 40.0% |
| ! | TTCCTTTTCTAGGTAGGTGA+AGG | + | chr1.3:8766619-8766638 | MS.gene33167:intron | 40.0% |
| !! | ACTCTTTGCTGTTTGATTGC+TGG | - | chr1.3:8765341-8765360 | None:intergenic | 40.0% |
| !! | ACTGGTGGATTAGAGTACAT+TGG | - | chr1.3:8766954-8766973 | None:intergenic | 40.0% |
| !!! | GGAACTTTTGTGCTACTTCA+TGG | + | chr1.3:8766045-8766064 | MS.gene33167:CDS | 40.0% |
| AAAATCCAAGCCAACCGTCT+TGG | - | chr1.3:8765740-8765759 | None:intergenic | 45.0% | |
| AAAGGATGGAAGGATTTCCC+TGG | + | chr1.3:8767376-8767395 | MS.gene33167:CDS | 45.0% | |
| AAATCCAAGCCAACCGTCTT+GGG | - | chr1.3:8765739-8765758 | None:intergenic | 45.0% | |
| AACCAGTTCCTGAAAGACCT+TGG | - | chr1.3:8765488-8765507 | None:intergenic | 45.0% | |
| AAGCGGATACAGCATGAAAC+CGG | + | chr1.3:8766285-8766304 | MS.gene33167:intron | 45.0% | |
| ACTCCAAGAATTGGATCAGG+AGG | - | chr1.3:8764876-8764895 | None:intergenic | 45.0% | |
| ACTCTAATCCACCAGTTCAC+GGG | + | chr1.3:8766958-8766977 | MS.gene33167:CDS | 45.0% | |
| AGCGATGTCAAGCTCAATCT+TGG | + | chr1.3:8764921-8764940 | MS.gene33167:CDS | 45.0% | |
| CAAAGGGGAAGTCAAAAACC+TGG | - | chr1.3:8767184-8767203 | None:intergenic | 45.0% | |
| CAACAGGGAAAGCTTAAGCT+TGG | + | chr1.3:8763875-8763894 | MS.gene33167:intron | 45.0% | |
| CAAGCTCAATCTTGGAGTTG+GGG | + | chr1.3:8764929-8764948 | MS.gene33167:CDS | 45.0% | |
| CAGTGGCAACCTGAGTAAAA+AGG | - | chr1.3:8765464-8765483 | None:intergenic | 45.0% | |
| CTCCAACCCTTTCAGCATAA+AGG | - | chr1.3:8766480-8766499 | None:intergenic | 45.0% | |
| CTCCAGCTCTCTTTGATGAA+TGG | + | chr1.3:8767009-8767028 | MS.gene33167:CDS | 45.0% | |
| GAAAGTGAAGCAGAGTGTGA+AGG | - | chr1.3:8763753-8763772 | None:intergenic | 45.0% | |
| GCAGAAATGGAAATGATGGC+TGG | + | chr1.3:8767035-8767054 | MS.gene33167:CDS | 45.0% | |
| GGGTTTGGCTGCATTTAACA+AGG | + | chr1.3:8765283-8765302 | MS.gene33167:CDS | 45.0% | |
| GTCAAGCTCAATCTTGGAGT+TGG | + | chr1.3:8764927-8764946 | MS.gene33167:CDS | 45.0% | |
| TACCCTGGTAATCTGATGTC+CGG | - | chr1.3:8764553-8764572 | None:intergenic | 45.0% | |
| ! | GGTGTTGGATCAATACCAGT+AGG | - | chr1.3:8766084-8766103 | None:intergenic | 45.0% |
| ! | TCGGTTTGAGGGTATACCAA+TGG | + | chr1.3:8764848-8764867 | MS.gene33167:CDS | 45.0% |
| !! | GGTACTTTTCCTCTGGAAAC+CGG | + | chr1.3:8764569-8764588 | MS.gene33167:intron | 45.0% |
| !! | TAGTATCGGTACTCAGACCA+TGG | - | chr1.3:8765712-8765731 | None:intergenic | 45.0% |
| !! | TTACCAGGGTACTTTTCCTC+TGG | + | chr1.3:8764562-8764581 | MS.gene33167:intron | 45.0% |
| !! | TTTCCAGAGGAAAAGTACCC+TGG | - | chr1.3:8764568-8764587 | None:intergenic | 45.0% |
| !! | TTTTTATAGTCGGCTCCGGA+AGG | + | chr1.3:8766024-8766043 | MS.gene33167:intron | 45.0% |
| !!! | ACGGTTGGCTTGGATTTTGA+GGG | + | chr1.3:8765742-8765761 | MS.gene33167:CDS | 45.0% |
| !!! | GCTATTTTTTCCCACTGCTC+TGG | - | chr1.3:8766105-8766124 | None:intergenic | 45.0% |
| AAATGCAGCCAAACCCTCGA+TGG | - | chr1.3:8765279-8765298 | None:intergenic | 50.0% | |
| AATCCAAGCCAACCGTCTTG+GGG | - | chr1.3:8765738-8765757 | None:intergenic | 50.0% | |
| AATGCAGCCAAACCCTCGAT+GGG | - | chr1.3:8765278-8765297 | None:intergenic | 50.0% | |
| ACCTCGGCCTTTATGCTGAA+AGG | + | chr1.3:8766470-8766489 | MS.gene33167:CDS | 50.0% | |
| ATTGCAGTATCTCCCCATCG+AGG | + | chr1.3:8765262-8765281 | MS.gene33167:intron | 50.0% | |
| ATTGGATCAGGAGGAGCCAT+TGG | - | chr1.3:8764867-8764886 | None:intergenic | 50.0% | |
| CAACACCTTGTTGCGGATTC+TGG | - | chr1.3:8766526-8766545 | None:intergenic | 50.0% | |
| CATCACCAGAATCCGCAACA+AGG | + | chr1.3:8766518-8766537 | MS.gene33167:CDS | 50.0% | |
| CCGATACTATGACCCCAAGA+CGG | + | chr1.3:8765723-8765742 | MS.gene33167:CDS | 50.0% | |
| CCGTCTTGGGGTCATAGTAT+CGG | - | chr1.3:8765726-8765745 | None:intergenic | 50.0% | |
| CCTCGGCCTTTATGCTGAAA+GGG | + | chr1.3:8766471-8766490 | MS.gene33167:CDS | 50.0% | |
| CGAGGGAATTCGTACATCGT+AGG | + | chr1.3:8765632-8765651 | MS.gene33167:intron | 50.0% | |
| CTCCGGACATCAGATTACCA+GGG | + | chr1.3:8764548-8764567 | MS.gene33167:intron | 50.0% | |
| CTCTAATCCACCAGTTCACG+GGG | + | chr1.3:8766959-8766978 | MS.gene33167:CDS | 50.0% | |
| GATCCTCGACACCAACATCA+AGG | + | chr1.3:8763773-8763792 | MS.gene33167:CDS | 50.0% | |
| GCAACTGCAGAGTTGTTGCT+CGG | + | chr1.3:8765305-8765324 | MS.gene33167:CDS | 50.0% | |
| GCTCCTCCTGATCCAATTCT+TGG | + | chr1.3:8764870-8764889 | MS.gene33167:CDS | 50.0% | |
| GGAGAGAGGGGAAAACAAAG+AGG | + | chr1.3:8765159-8765178 | MS.gene33167:CDS | 50.0% | |
| GGATGTGCACATAACCCTAC+TGG | + | chr1.3:8766066-8766085 | MS.gene33167:CDS | 50.0% | |
| GGCCTTTATGCTGAAAGGGT+TGG | + | chr1.3:8766475-8766494 | MS.gene33167:CDS | 50.0% | |
| GTCATCTGGTCGGATCTGTA+TGG | + | chr1.3:8764806-8764825 | MS.gene33167:intron | 50.0% | |
| GTCCAAGGTCTTTCAGGAAC+TGG | + | chr1.3:8765483-8765502 | MS.gene33167:CDS | 50.0% | |
| GTTTGTATCACGTGGCATGG+AGG | + | chr1.3:8766420-8766439 | MS.gene33167:CDS | 50.0% | |
| TACTATGACCCCAAGACGGT+TGG | + | chr1.3:8765727-8765746 | MS.gene33167:CDS | 50.0% | |
| TCAACGATGCTCGAGTACCA+TGG | + | chr1.3:8765692-8765711 | MS.gene33167:CDS | 50.0% | |
| TCCTGAAAGACCTTGGACAG+TGG | - | chr1.3:8765481-8765500 | None:intergenic | 50.0% | |
| TGATCCAACACCAGAGCAGT+GGG | + | chr1.3:8766092-8766111 | MS.gene33167:CDS | 50.0% | |
| TGGAAGCCTTGACGAAGATG+CGG | + | chr1.3:8766384-8766403 | MS.gene33167:CDS | 50.0% | |
| TTGATCCAACACCAGAGCAG+TGG | + | chr1.3:8766091-8766110 | MS.gene33167:CDS | 50.0% | |
| TTGCAGTATCTCCCCATCGA+GGG | + | chr1.3:8765263-8765282 | MS.gene33167:intron | 50.0% | |
| ! | AGCAGAGTGTGAAGGTACAG+AGG | - | chr1.3:8763745-8763764 | None:intergenic | 50.0% |
| ! | TGTTGCGGATTCTGGTGATG+AGG | - | chr1.3:8766518-8766537 | None:intergenic | 50.0% |
| ! | TTTTCCCACTGCTCTGGTGT+TGG | - | chr1.3:8766099-8766118 | None:intergenic | 50.0% |
| !! | ACTTTTCCTCTGGAAACCGG+AGG | + | chr1.3:8764572-8764591 | MS.gene33167:intron | 50.0% |
| !! | CTTTTCCTCTGGAAACCGGA+GGG | + | chr1.3:8764573-8764592 | MS.gene33167:intron | 50.0% |
| !! | GAACCTTGATGTTGGTGTCG+AGG | - | chr1.3:8763779-8763798 | None:intergenic | 50.0% |
| !!! | GACGGTTGGCTTGGATTTTG+AGG | + | chr1.3:8765741-8765760 | MS.gene33167:CDS | 50.0% |
| ACAATCCTAGCCCCGTGAAC+TGG | - | chr1.3:8766972-8766991 | None:intergenic | 55.0% | |
| ATGCAGCCAAACCCTCGATG+GGG | - | chr1.3:8765277-8765296 | None:intergenic | 55.0% | |
| CAGAAGCCGCATCTTCGTCA+AGG | - | chr1.3:8766393-8766412 | None:intergenic | 55.0% | |
| CCCTTTCAGCATAAAGGCCG+AGG | - | chr1.3:8766474-8766493 | None:intergenic | 55.0% | |
| CCTCCGGACATCAGATTACC+AGG | + | chr1.3:8764547-8764566 | MS.gene33167:intron | 55.0% | |
| CCTGGTAATCTGATGTCCGG+AGG | - | chr1.3:8764550-8764569 | None:intergenic | 55.0% | |
| CTTAACCCTCCGGTTTCCAG+AGG | - | chr1.3:8764581-8764600 | None:intergenic | 55.0% | |
| GATGGAAGGATTTCCCTGGC+AGG | + | chr1.3:8767380-8767399 | MS.gene33167:CDS | 55.0% | |
| GCCACTGTCCAAGGTCTTTC+AGG | + | chr1.3:8765477-8765496 | MS.gene33167:CDS | 55.0% | |
| GTATCTCCCCATCGAGGGTT+TGG | + | chr1.3:8765268-8765287 | MS.gene33167:intron | 55.0% | |
| TGGAGTTGGGGCCTACAGAA+CGG | + | chr1.3:8764941-8764960 | MS.gene33167:CDS | 55.0% | |
| TTCCCTGGCAGGATTGTCGT+TGG | + | chr1.3:8767391-8767410 | MS.gene33167:CDS | 55.0% | |
| ! | ACTCAGGTTGCCACTGTCCA+AGG | + | chr1.3:8765468-8765487 | MS.gene33167:intron | 55.0% |
| ! | GGAACTGGTTCTCTGCGACT+AGG | + | chr1.3:8765498-8765517 | MS.gene33167:CDS | 55.0% |
| ATCCACCAGTTCACGGGGCT+AGG | + | chr1.3:8766964-8766983 | MS.gene33167:CDS | 60.0% | |
| ATCCTAGCCCCGTGAACTGG+TGG | - | chr1.3:8766969-8766988 | None:intergenic | 60.0% | |
| CACGGGCTTGAACAAGAGCC+AGG | + | chr1.3:8767163-8767182 | MS.gene33167:CDS | 60.0% | |
| GGCCAACGACAATCCTGCCA+GGG | - | chr1.3:8767396-8767415 | None:intergenic | 60.0% | |
| TGGCCAACGACAATCCTGCC+AGG | - | chr1.3:8767397-8767416 | None:intergenic | 60.0% | |
| ! | TGACCCCAAGACGGTTGGCT+TGG | + | chr1.3:8765732-8765751 | MS.gene33167:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 8763720 | 8767469 | 8763720 | ID=MS.gene33167 |
| chr1.3 | mRNA | 8763720 | 8767469 | 8763720 | ID=MS.gene33167.t1;Parent=MS.gene33167 |
| chr1.3 | exon | 8763720 | 8763794 | 8763720 | ID=MS.gene33167.t1.exon1;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8763720 | 8763794 | 8763720 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8763881 | 8763952 | 8763881 | ID=MS.gene33167.t1.exon2;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8763881 | 8763952 | 8763881 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8764807 | 8765001 | 8764807 | ID=MS.gene33167.t1.exon3;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8764807 | 8765001 | 8764807 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8765142 | 8765180 | 8765142 | ID=MS.gene33167.t1.exon4;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8765142 | 8765180 | 8765142 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8765269 | 8765358 | 8765269 | ID=MS.gene33167.t1.exon5;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8765269 | 8765358 | 8765269 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8765474 | 8765582 | 8765474 | ID=MS.gene33167.t1.exon6;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8765474 | 8765582 | 8765474 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8765674 | 8765783 | 8765674 | ID=MS.gene33167.t1.exon7;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8765674 | 8765783 | 8765674 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8766033 | 8766176 | 8766033 | ID=MS.gene33167.t1.exon8;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8766033 | 8766176 | 8766033 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8766373 | 8766539 | 8766373 | ID=MS.gene33167.t1.exon9;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8766373 | 8766539 | 8766373 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8766920 | 8767184 | 8766920 | ID=MS.gene33167.t1.exon10;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8766920 | 8767184 | 8766920 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| chr1.3 | exon | 8767338 | 8767469 | 8767338 | ID=MS.gene33167.t1.exon11;Parent=MS.gene33167.t1 |
| chr1.3 | CDS | 8767338 | 8767469 | 8767338 | ID=cds.MS.gene33167.t1;Parent=MS.gene33167.t1 |
| Gene Sequence |
| Protein sequence |
