Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006930.t1 | XP_003607905.1 | 93.7 | 621 | 21 | 1 | 1 | 603 | 1 | 621 | 0.00E+00 | 1156 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006930.t1 | Q88BD4 | 27.7 | 429 | 268 | 12 | 91 | 501 | 17 | 421 | 4.0e-33 | 144.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006930.t1 | G7JJZ2 | 93.7 | 621 | 21 | 1 | 1 | 603 | 1 | 621 | 0.0e+00 | 1156.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006930 | MS.gene49437 | PPI |
| MS.gene34039 | MS.gene006930 | PPI |
| MS.gene006930 | MS.gene005970 | PPI |
| MS.gene006930 | MS.gene54796 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006930.t1 | MTR_4g084270 | 93.720 | 621 | 21 | 1 | 1 | 603 | 1 | 621 | 0.0 | 1194 |
| MS.gene006930.t1 | MTR_1g094980 | 40.395 | 557 | 269 | 13 | 71 | 597 | 18 | 541 | 1.53e-119 | 365 |
| MS.gene006930.t1 | MTR_1g094980 | 40.395 | 557 | 269 | 13 | 71 | 597 | 90 | 613 | 1.50e-118 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006930.t1 | AT1G70820 | 71.036 | 618 | 151 | 6 | 1 | 597 | 1 | 611 | 0.0 | 895 |
| MS.gene006930.t1 | AT1G70820 | 71.692 | 597 | 141 | 6 | 1 | 576 | 1 | 590 | 0.0 | 872 |
| MS.gene006930.t1 | AT5G17530 | 40.987 | 527 | 252 | 11 | 73 | 570 | 20 | 516 | 2.73e-117 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.011 | 534 | 254 | 12 | 68 | 570 | 52 | 555 | 1.42e-116 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.011 | 534 | 254 | 12 | 68 | 570 | 52 | 555 | 1.42e-116 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.011 | 534 | 254 | 12 | 68 | 570 | 52 | 555 | 1.42e-116 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.011 | 534 | 254 | 12 | 68 | 570 | 52 | 555 | 1.42e-116 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.011 | 534 | 254 | 12 | 68 | 570 | 85 | 588 | 3.21e-116 | 359 |
| MS.gene006930.t1 | AT5G17530 | 41.794 | 524 | 244 | 12 | 68 | 560 | 85 | 578 | 2.17e-115 | 358 |
Find 144 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACACTTATTACAGATTTA+TGG | 0.135060 | 4.3:+27524707 | None:intergenic |
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4.3:-27521478 | MS.gene006930:CDS |
| AACTCCACTTAAGGGATTTC+AGG | 0.200454 | 4.3:-27523962 | MS.gene006930:intron |
| TCTCCTTGATGATTTCTCTT+AGG | 0.241263 | 4.3:+27524010 | None:intergenic |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4.3:+27522937 | None:intergenic |
| GATATCCTGTTGAGAATGTT+AGG | 0.282778 | 4.3:-27524480 | MS.gene006930:CDS |
| AACAATGAACATGGACAATA+TGG | 0.295037 | 4.3:-27521753 | MS.gene006930:CDS |
| GAGGCAATATCAGAGAGTTT+TGG | 0.300966 | 4.3:-27524538 | MS.gene006930:CDS |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4.3:+27522782 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4.3:+27521699 | None:intergenic |
| CATATTGTAAATCAGGCTAA+TGG | 0.323981 | 4.3:+27521454 | None:intergenic |
| AATGGTTTAGAGAAGGAAAA+AGG | 0.330346 | 4.3:-27524502 | MS.gene006930:CDS |
| GCATTATGAAACTCCACTTA+AGG | 0.337071 | 4.3:-27523971 | MS.gene006930:CDS |
| TGTCTATGATGCTTCGATAA+TGG | 0.339955 | 4.3:-27524311 | MS.gene006930:CDS |
| TGCTTTAGCATTTCGAGGTT+CGG | 0.347623 | 4.3:+27522410 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4.3:-27523015 | MS.gene006930:CDS |
| TGGTTGTATGGTGTTCGATA+TGG | 0.364157 | 4.3:-27524383 | MS.gene006930:CDS |
| CATTATGAAACTCCACTTAA+GGG | 0.365922 | 4.3:-27523970 | MS.gene006930:CDS |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4.3:-27523180 | MS.gene006930:CDS |
| TGTACGAGCATCGGTTACTA+TGG | 0.390617 | 4.3:+27522870 | None:intergenic |
| AGAAGATGAGAAACCAAGTT+TGG | 0.394739 | 4.3:+27524738 | None:intergenic |
| GTAATAAGTGTGAAATGTTA+TGG | 0.397911 | 4.3:-27524697 | MS.gene006930:CDS |
| ATGAAGAACTGGACAAGATT+AGG | 0.401197 | 4.3:-27524645 | MS.gene006930:CDS |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4.3:+27521700 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4.3:-27522691 | MS.gene006930:intron |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4.3:-27522074 | MS.gene006930:CDS |
| TTTGGGGAGTGGGTTATCAA+TGG | 0.408829 | 4.3:-27524520 | MS.gene006930:CDS |
| TGACAAACTCATTGCTCTAA+TGG | 0.414650 | 4.3:-27522926 | MS.gene006930:CDS |
| TTGAGTGTTGCAGTGTTTGC+CGG | 0.424973 | 4.3:-27524418 | MS.gene006930:CDS |
| TCTTGCCCGTGCTGGTTGTA+TGG | 0.435743 | 4.3:-27524395 | MS.gene006930:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4.3:+27523075 | None:intergenic |
| ATACAGGAAGGGAGGCTTGA+AGG | 0.440640 | 4.3:-27522105 | MS.gene006930:intron |
| CAGAATGGTTCGGATGTTAG+AGG | 0.441225 | 4.3:-27524616 | MS.gene006930:CDS |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4.3:-27523129 | MS.gene006930:CDS |
| ATATTGTAAATCAGGCTAAT+GGG | 0.446537 | 4.3:+27521455 | None:intergenic |
| AATGGCTGCCATTGTGTTGA+AGG | 0.447307 | 4.3:-27522908 | MS.gene006930:CDS |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4.3:+27522686 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4.3:+27522447 | None:intergenic |
| ACACACTGTCATTCTTTGCT+AGG | 0.461028 | 4.3:-27524781 | MS.gene006930:CDS |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4.3:+27522880 | None:intergenic |
| CAAACCTGAAATCCCTTAAG+TGG | 0.467227 | 4.3:+27523958 | None:intergenic |
| GGACGCGACCCTCGAGTCAC+AGG | 0.474920 | 4.3:-27524448 | MS.gene006930:CDS |
| TACAGGAAGGGAGGCTTGAA+GGG | 0.476653 | 4.3:-27522104 | MS.gene006930:intron |
| GACACCCTAACATTCTCAAC+AGG | 0.478256 | 4.3:+27524475 | None:intergenic |
| GTTGCATTGGAAGGCGAGAA+AGG | 0.478585 | 4.3:-27524592 | MS.gene006930:CDS |
| TCGAAAATATGCAAATAGAT+TGG | 0.479157 | 4.3:-27524100 | MS.gene006930:CDS |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4.3:-27522949 | MS.gene006930:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4.3:+27523090 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4.3:-27522073 | MS.gene006930:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4.3:-27522730 | MS.gene006930:CDS |
| CCTCGAAATGCTAAAGCAAA+AGG | 0.489207 | 4.3:-27522405 | MS.gene006930:CDS |
| CTTATTACAGATTTATGGAA+TGG | 0.490807 | 4.3:+27524712 | None:intergenic |
| CCTCCACGGCAGGAGGAGTA+AGG | 0.491033 | 4.3:+27524557 | None:intergenic |
| TTTGCCGGTCTTGCCCGTGC+TGG | 0.491242 | 4.3:-27524403 | MS.gene006930:CDS |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4.3:-27522532 | MS.gene006930:CDS |
| TCTGATATTGCCTCCACGGC+AGG | 0.494254 | 4.3:+27524547 | None:intergenic |
| ACTAAGTTTATAACTGATAG+AGG | 0.494437 | 4.3:-27522835 | MS.gene006930:CDS |
| GGTTGTATGGTGTTCGATAT+GGG | 0.494885 | 4.3:-27524382 | MS.gene006930:CDS |
| CTTATGAATCAGTAGAACTT+AGG | 0.496088 | 4.3:-27522446 | MS.gene006930:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4.3:+27521494 | None:intergenic |
| ACAACCAGCACGGGCAAGAC+CGG | 0.498948 | 4.3:+27524399 | None:intergenic |
| TAGGAGGCTTCAGAATGGTT+CGG | 0.500282 | 4.3:-27524626 | MS.gene006930:CDS |
| ATGAACATGGACAATATGGT+TGG | 0.503010 | 4.3:-27521749 | MS.gene006930:CDS |
| GGAAGGGAGGCTTGAAGGGT+GGG | 0.505364 | 4.3:-27522100 | MS.gene006930:CDS |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4.3:-27522062 | MS.gene006930:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4.3:-27521667 | MS.gene006930:CDS |
| CACCATTGTTTATACCGTGT+TGG | 0.512861 | 4.3:-27522808 | MS.gene006930:CDS |
| AGTAGTGGTGGATGAAGAAC+TGG | 0.516808 | 4.3:-27524656 | MS.gene006930:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4.3:-27522501 | MS.gene006930:CDS |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4.3:-27523192 | MS.gene006930:intron |
| ATCGAAGCATCATAGACAAA+TGG | 0.522028 | 4.3:+27524316 | None:intergenic |
| ATATAATCAAGGGGCCTACA+TGG | 0.522429 | 4.3:-27522556 | MS.gene006930:intron |
| ATATTGATGCTCAAATGTAC+AGG | 0.524473 | 4.3:-27522008 | MS.gene006930:intron |
| TTTGAGCATCAATATGAGCC+GGG | 0.527926 | 4.3:+27522016 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4.3:-27522063 | MS.gene006930:CDS |
| GGAGTTCAGCTTAACAAGGA+TGG | 0.534906 | 4.3:-27522763 | MS.gene006930:CDS |
| TGAACATGGACAATATGGTT+GGG | 0.537649 | 4.3:-27521748 | MS.gene006930:CDS |
| GAGAATGTTAGGGTGTCTCT+TGG | 0.540583 | 4.3:-27524469 | MS.gene006930:CDS |
| ATTTGAGCATCAATATGAGC+CGG | 0.540769 | 4.3:+27522015 | None:intergenic |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4.3:-27523186 | MS.gene006930:CDS |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4.3:+27523113 | None:intergenic |
| AGGAAGGGAGGCTTGAAGGG+TGG | 0.556344 | 4.3:-27522101 | MS.gene006930:CDS |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.559396 | 4.3:-27522767 | MS.gene006930:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4.3:+27522680 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4.3:-27522495 | MS.gene006930:CDS |
| CGACCTTACTCCTCCTGCCG+TGG | 0.566388 | 4.3:-27524560 | MS.gene006930:CDS |
| GGTTATCAATGGTTTAGAGA+AGG | 0.568136 | 4.3:-27524509 | MS.gene006930:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4.3:-27523144 | MS.gene006930:CDS |
| ATATCCTGTTGAGAATGTTA+GGG | 0.574389 | 4.3:-27524479 | MS.gene006930:CDS |
| GATACCGATGTGGACAGAAG+CGG | 0.574799 | 4.3:-27522982 | MS.gene006930:CDS |
| GGATGTTAGAGGAGTTGCAT+TGG | 0.576031 | 4.3:-27524605 | MS.gene006930:CDS |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4.3:-27522963 | MS.gene006930:CDS |
| ATTTAGACCCTGTGACTCGA+GGG | 0.578792 | 4.3:+27524440 | None:intergenic |
| CCTTACTCCTCCTGCCGTGG+AGG | 0.582653 | 4.3:-27524557 | MS.gene006930:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4.3:-27521684 | MS.gene006930:CDS |
| GTTAGAGGAGTTGCATTGGA+AGG | 0.585950 | 4.3:-27524601 | MS.gene006930:CDS |
| TATGATGCTTCGATAATGGT+AGG | 0.591163 | 4.3:-27524307 | MS.gene006930:intron |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4.3:-27523105 | MS.gene006930:CDS |
| AGTGGAGTTTCATAATGCAA+AGG | 0.592830 | 4.3:+27523976 | None:intergenic |
| GAACACCATACAACCAGCAC+GGG | 0.593242 | 4.3:+27524390 | None:intergenic |
| GATATTGCCTCCACGGCAGG+AGG | 0.597822 | 4.3:+27524550 | None:intergenic |
| AAGATTAGGAGGCTTCAGAA+TGG | 0.602089 | 4.3:-27524631 | MS.gene006930:CDS |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4.3:-27522513 | MS.gene006930:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4.3:-27522516 | MS.gene006930:CDS |
| ACTCTCTGATATTGCCTCCA+CGG | 0.605057 | 4.3:+27524543 | None:intergenic |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4.3:-27523058 | MS.gene006930:CDS |
| GACGCGACCCTCGAGTCACA+GGG | 0.611240 | 4.3:-27524447 | MS.gene006930:CDS |
| AAGAACTGGACAAGATTAGG+AGG | 0.612386 | 4.3:-27524642 | MS.gene006930:CDS |
| AATTTAGACCCTGTGACTCG+AGG | 0.613432 | 4.3:+27524439 | None:intergenic |
| TTGTTGCTATACAGGAAGGG+AGG | 0.615684 | 4.3:-27522113 | MS.gene006930:intron |
| AAATGCTAAAGCAAAAGGAT+CGG | 0.620165 | 4.3:-27522400 | MS.gene006930:CDS |
| TGCTAAAGCAAAAGGATCGG+AGG | 0.622933 | 4.3:-27522397 | MS.gene006930:CDS |
| GAAGCATCATAGACAAATGG+AGG | 0.623916 | 4.3:+27524319 | None:intergenic |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4.3:-27522964 | MS.gene006930:CDS |
| TGACATACTTGTACGAGCAT+CGG | 0.628100 | 4.3:+27522861 | None:intergenic |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4.3:-27522500 | MS.gene006930:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4.3:-27523177 | MS.gene006930:CDS |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4.3:-27522784 | MS.gene006930:CDS |
| CATGAAACAAGCTGGTGTGG+TGG | 0.638242 | 4.3:+27524354 | None:intergenic |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4.3:-27522724 | MS.gene006930:CDS |
| TGCAAAGTATGATGAAGTAG+TGG | 0.641435 | 4.3:-27524671 | MS.gene006930:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4.3:-27521762 | MS.gene006930:CDS |
| GCACCTAAGAGAAATCATCA+AGG | 0.645515 | 4.3:-27524013 | MS.gene006930:CDS |
| AACCAACACGGTATAAACAA+TGG | 0.645851 | 4.3:+27522806 | None:intergenic |
| AATATGGTTGGGTACACATG+AGG | 0.650839 | 4.3:-27521737 | MS.gene006930:CDS |
| CGAACACCATACAACCAGCA+CGG | 0.651126 | 4.3:+27524389 | None:intergenic |
| ATTGTGTTGAAGGAAAATCC+AGG | 0.652908 | 4.3:-27522898 | MS.gene006930:CDS |
| AATGTGCTCATGAAACAAGC+TGG | 0.662216 | 4.3:+27524346 | None:intergenic |
| GGGTGTCATTTGTATCAACA+AGG | 0.663565 | 4.3:+27522037 | None:intergenic |
| TTGAGCATCAATATGAGCCG+GGG | 0.674597 | 4.3:+27522017 | None:intergenic |
| CGATGTGGACAGAAGCGGCG+TGG | 0.675951 | 4.3:-27522977 | MS.gene006930:CDS |
| TGACATTTCGGTAACCAACA+CGG | 0.676059 | 4.3:+27522794 | None:intergenic |
| AATAGTCTTTGATACCGATG+TGG | 0.676237 | 4.3:-27522992 | MS.gene006930:CDS |
| GCTCATGAAACAAGCTGGTG+TGG | 0.679906 | 4.3:+27524351 | None:intergenic |
| TAATCAAGGGGCCTACATGG+TGG | 0.680927 | 4.3:-27522553 | MS.gene006930:intron |
| TGTTGATACAAATGACACCC+CGG | 0.681662 | 4.3:-27522034 | MS.gene006930:CDS |
| AAAGTATGATGAAGTAGTGG+TGG | 0.692926 | 4.3:-27524668 | MS.gene006930:CDS |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4.3:-27523073 | MS.gene006930:CDS |
| AGAAGAAGTATGTGACAAAG+CGG | 0.700368 | 4.3:-27524124 | MS.gene006930:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4.3:-27522832 | MS.gene006930:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4.3:-27521681 | MS.gene006930:CDS |
| GGGTGGGAGTTAGACTCATG+TGG | 0.714856 | 4.3:-27522084 | MS.gene006930:CDS |
| CACGCCGCTTCTGTCCACAT+CGG | 0.732883 | 4.3:+27522978 | None:intergenic |
| AACATTTCGAAACTACATCG+AGG | 0.756295 | 4.3:-27522367 | MS.gene006930:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATCTTAATATATTGAAT+AGG | + | chr4.3:27522451-27522470 | None:intergenic | 15.0% |
| !! | AGATCTTAATATATTGAATA+GGG | + | chr4.3:27522450-27522469 | None:intergenic | 15.0% |
| !! | ATTCAATATATTAAGATCTT+AGG | - | chr4.3:27522451-27522470 | MS.gene006930:CDS | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | + | chr4.3:27524758-27524777 | None:intergenic | 15.0% |
| !!! | AAATTTTCAAAGAAAATAGA+GGG | + | chr4.3:27523058-27523077 | None:intergenic | 15.0% |
| !!! | CTGTATTTTTATATAATCAA+GGG | - | chr4.3:27523737-27523756 | MS.gene006930:intron | 15.0% |
| !!! | TAAATTTTCAAAGAAAATAG+AGG | + | chr4.3:27523059-27523078 | None:intergenic | 15.0% |
| !!! | TCTGTATTTTTATATAATCA+AGG | - | chr4.3:27523736-27523755 | MS.gene006930:intron | 15.0% |
| !!! | TGTATTTTTATATAATCAAG+GGG | - | chr4.3:27523738-27523757 | MS.gene006930:intron | 15.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | - | chr4.3:27524382-27524401 | MS.gene006930:CDS | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | - | chr4.3:27523771-27523790 | MS.gene006930:intron | 20.0% |
| !! | TGAAAAAGTCCTTATATTTA+AGG | + | chr4.3:27524394-27524413 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | - | chr4.3:27524825-27524844 | MS.gene006930:CDS | 20.0% |
| !!! | GCGTTTATTTTTTACAAAAA+GGG | - | chr4.3:27524425-27524444 | MS.gene006930:CDS | 20.0% |
| !!! | TGAAATTTTTTACAAAGAGA+GGG | - | chr4.3:27522136-27522155 | MS.gene006930:intron | 20.0% |
| !!! | TTATTTTTTACAAAAAGGGA+CGG | - | chr4.3:27524429-27524448 | MS.gene006930:CDS | 20.0% |
| !!! | TTGAAATTTTTTACAAAGAG+AGG | - | chr4.3:27522135-27522154 | MS.gene006930:intron | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | + | chr4.3:27524697-27524716 | None:intergenic | 20.0% |
| ! | AATATATTGAATAGGGCATA+AGG | + | chr4.3:27522443-27522462 | None:intergenic | 25.0% |
| ! | AATTGCATTTAGACTTAGTT+TGG | + | chr4.3:27522979-27522998 | None:intergenic | 25.0% |
| ! | ACAATGTGTTCAAAATATGT+AGG | + | chr4.3:27524144-27524163 | None:intergenic | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | - | chr4.3:27523468-27523487 | MS.gene006930:intron | 25.0% |
| ! | ACTAGTTAAACTGTTCAATT+CGG | + | chr4.3:27522509-27522528 | None:intergenic | 25.0% |
| ! | ATTTAGAAGATACCAAATAC+AGG | + | chr4.3:27522412-27522431 | None:intergenic | 25.0% |
| ! | CACGTACATAAAAAAAATTG+TGG | + | chr4.3:27524057-27524076 | None:intergenic | 25.0% |
| ! | CTTATTACAGATTTATGGAA+TGG | + | chr4.3:27521594-27521613 | None:intergenic | 25.0% |
| ! | GTAATAAGTGTGAAATGTTA+TGG | - | chr4.3:27521606-27521625 | MS.gene006930:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | + | chr4.3:27524734-27524753 | None:intergenic | 25.0% |
| ! | TATTAAGATCTTAGGAACTA+CGG | - | chr4.3:27522459-27522478 | MS.gene006930:CDS | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | - | chr4.3:27524719-27524738 | MS.gene006930:CDS | 25.0% |
| ! | TCACACTTATTACAGATTTA+TGG | + | chr4.3:27521599-27521618 | None:intergenic | 25.0% |
| ! | TCGAAAATATGCAAATAGAT+TGG | - | chr4.3:27522203-27522222 | MS.gene006930:intron | 25.0% |
| ! | TTAATTTAAACATGACCTAG+AGG | - | chr4.3:27522715-27522734 | MS.gene006930:CDS | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | - | chr4.3:27524541-27524560 | MS.gene006930:CDS | 25.0% |
| !! | ATTTAGACTTAGTTTGGATT+AGG | + | chr4.3:27522973-27522992 | None:intergenic | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | - | chr4.3:27524505-27524524 | MS.gene006930:CDS | 25.0% |
| !! | TCTATTTATAAGCACGTTTT+GGG | - | chr4.3:27524356-27524375 | MS.gene006930:CDS | 25.0% |
| !!! | AAATTTTTTACAAAGAGAGG+GGG | - | chr4.3:27522138-27522157 | MS.gene006930:intron | 25.0% |
| !!! | ATATTTTTGCAAACCAAACT+TGG | - | chr4.3:27521552-27521571 | MS.gene006930:intron | 25.0% |
| !!! | CGCGTTTATTTTTTACAAAA+AGG | - | chr4.3:27524424-27524443 | MS.gene006930:CDS | 25.0% |
| !!! | GAAATTTTTTACAAAGAGAG+GGG | - | chr4.3:27522137-27522156 | MS.gene006930:intron | 25.0% |
| !!! | TACATATTTTGAACACATTG+TGG | - | chr4.3:27524143-27524162 | MS.gene006930:CDS | 25.0% |
| AAAGCTAGTTGAAGTTTAGT+GGG | + | chr4.3:27523983-27524002 | None:intergenic | 30.0% | |
| AAATAACTGAACCGTAAACA+GGG | + | chr4.3:27522662-27522681 | None:intergenic | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | - | chr4.3:27523903-27523922 | MS.gene006930:intron | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | - | chr4.3:27523354-27523373 | MS.gene006930:intron | 30.0% | |
| AACAATGAACATGGACAATA+TGG | - | chr4.3:27524550-27524569 | MS.gene006930:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | - | chr4.3:27523471-27523490 | MS.gene006930:intron | 30.0% | |
| AATGGTTTAGAGAAGGAAAA+AGG | - | chr4.3:27521801-27521820 | MS.gene006930:intron | 30.0% | |
| ACTTTATTGAGGCAAATCAA+GGG | - | chr4.3:27524516-27524535 | MS.gene006930:CDS | 30.0% | |
| AGGTGATAGAGAGTAAATTA+AGG | - | chr4.3:27524013-27524032 | MS.gene006930:CDS | 30.0% | |
| ATAATAGTGAATGCTGGAAA+CGG | - | chr4.3:27523117-27523136 | MS.gene006930:CDS | 30.0% | |
| ATATCCTGTTGAGAATGTTA+GGG | - | chr4.3:27521824-27521843 | MS.gene006930:intron | 30.0% | |
| ATATTGATGCTCAAATGTAC+AGG | - | chr4.3:27524295-27524314 | MS.gene006930:intron | 30.0% | |
| CAAAACGTGCTTATAAATAG+AGG | + | chr4.3:27524357-27524376 | None:intergenic | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | - | chr4.3:27523573-27523592 | MS.gene006930:intron | 30.0% | |
| CATTATGAAACTCCACTTAA+GGG | - | chr4.3:27522333-27522352 | MS.gene006930:intron | 30.0% | |
| CTTATGAATCAGTAGAACTT+AGG | - | chr4.3:27523857-27523876 | MS.gene006930:intron | 30.0% | |
| GGTGATAGAGAGTAAATTAA+GGG | - | chr4.3:27524014-27524033 | MS.gene006930:CDS | 30.0% | |
| GTTGTTTATTCAACAGATGA+CGG | - | chr4.3:27522083-27522102 | MS.gene006930:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | + | chr4.3:27523626-27523645 | None:intergenic | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | + | chr4.3:27524812-27524831 | None:intergenic | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | - | chr4.3:27523288-27523307 | MS.gene006930:intron | 30.0% | |
| TTGTTACATATGCCTGTATT+TGG | - | chr4.3:27522397-27522416 | MS.gene006930:CDS | 30.0% | |
| ! | CTATTTATAAGCACGTTTTG+GGG | - | chr4.3:27524357-27524376 | MS.gene006930:CDS | 30.0% |
| ! | CTCATGAAATCAACTTTTGT+TGG | + | chr4.3:27522258-27522277 | None:intergenic | 30.0% |
| ! | CTCTATTTATAAGCACGTTT+TGG | - | chr4.3:27524355-27524374 | MS.gene006930:CDS | 30.0% |
| ! | TATAATTTTCACCACCATGT+AGG | + | chr4.3:27523764-27523783 | None:intergenic | 30.0% |
| ! | TTTTTGTTGCTATACAGGAA+GGG | - | chr4.3:27524187-27524206 | MS.gene006930:intron | 30.0% |
| !! | AACTAGCTTTGGTTTCTTTA+AGG | - | chr4.3:27523993-27524012 | MS.gene006930:CDS | 30.0% |
| !! | CTAAATGCAATTTTGAAGAG+AGG | - | chr4.3:27522987-27523006 | MS.gene006930:CDS | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | + | chr4.3:27523859-27523878 | None:intergenic | 30.0% |
| !!! | AATTTTTTACAAAGAGAGGG+GGG | - | chr4.3:27522139-27522158 | MS.gene006930:intron | 30.0% |
| !!! | GTGTTTTTTTGTTGCTATAC+AGG | - | chr4.3:27524182-27524201 | MS.gene006930:intron | 30.0% |
| !!! | TTTTTTGTTGCTATACAGGA+AGG | - | chr4.3:27524186-27524205 | MS.gene006930:intron | 30.0% |
| AAAGTATGATGAAGTAGTGG+TGG | - | chr4.3:27521635-27521654 | MS.gene006930:intron | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | - | chr4.3:27523936-27523955 | MS.gene006930:intron | 35.0% | |
| AACCAACACGGTATAAACAA+TGG | + | chr4.3:27523500-27523519 | None:intergenic | 35.0% | |
| AATAGTCTTTGATACCGATG+TGG | - | chr4.3:27523311-27523330 | MS.gene006930:intron | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | + | chr4.3:27523620-27523639 | None:intergenic | 35.0% | |
| AGAAGATGAGAAACCAAGTT+TGG | + | chr4.3:27521568-27521587 | None:intergenic | 35.0% | |
| AGTGGAGTTTCATAATGCAA+AGG | + | chr4.3:27522330-27522349 | None:intergenic | 35.0% | |
| ATGAACATGGACAATATGGT+TGG | - | chr4.3:27524554-27524573 | MS.gene006930:CDS | 35.0% | |
| ATGAAGAACTGGACAAGATT+AGG | - | chr4.3:27521658-27521677 | MS.gene006930:CDS | 35.0% | |
| ATGAGTTTGTCACCGTTTAT+TGG | + | chr4.3:27523369-27523388 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | - | chr4.3:27523579-27523598 | MS.gene006930:intron | 35.0% | |
| ATGCCAGCTTATGAGTTAAA+AGG | + | chr4.3:27522934-27522953 | None:intergenic | 35.0% | |
| ATTGTGTTGAAGGAAAATCC+AGG | - | chr4.3:27523405-27523424 | MS.gene006930:intron | 35.0% | |
| ATTTGAATACAGCGCATTAC+AGG | + | chr4.3:27523024-27523043 | None:intergenic | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | + | chr4.3:27524291-27524310 | None:intergenic | 35.0% | |
| CAAAGCTAGTTGAAGTTTAG+TGG | + | chr4.3:27523984-27524003 | None:intergenic | 35.0% | |
| CAAATAACTGAACCGTAAAC+AGG | + | chr4.3:27522663-27522682 | None:intergenic | 35.0% | |
| CTACAGATAATAGTGAATGC+TGG | - | chr4.3:27523111-27523130 | MS.gene006930:CDS | 35.0% | |
| CTATGGTTATTTGAGTGGTT+CGG | - | chr4.3:27522555-27522574 | MS.gene006930:intron | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | + | chr4.3:27523524-27523543 | None:intergenic | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | - | chr4.3:27523612-27523631 | MS.gene006930:intron | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | - | chr4.3:27523787-27523806 | MS.gene006930:intron | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | - | chr4.3:27524515-27524534 | MS.gene006930:CDS | 35.0% | |
| GATATCCTGTTGAGAATGTT+AGG | - | chr4.3:27521823-27521842 | MS.gene006930:intron | 35.0% | |
| GCATTATGAAACTCCACTTA+AGG | - | chr4.3:27522332-27522351 | MS.gene006930:intron | 35.0% | |
| GGTTATCAATGGTTTAGAGA+AGG | - | chr4.3:27521794-27521813 | MS.gene006930:intron | 35.0% | |
| TAAATGAGAGAGCTTCTCAA+AGG | + | chr4.3:27522907-27522926 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | - | chr4.3:27523519-27523538 | MS.gene006930:intron | 35.0% | |
| TGAACATGGACAATATGGTT+GGG | - | chr4.3:27524555-27524574 | MS.gene006930:CDS | 35.0% | |
| TGACAAACTCATTGCTCTAA+TGG | - | chr4.3:27523377-27523396 | MS.gene006930:intron | 35.0% | |
| TGCAAAGTATGATGAAGTAG+TGG | - | chr4.3:27521632-27521651 | MS.gene006930:intron | 35.0% | |
| TGCTTATAAATAGAGGCGAA+GGG | + | chr4.3:27524350-27524369 | None:intergenic | 35.0% | |
| TGTCTATGATGCTTCGATAA+TGG | - | chr4.3:27521992-27522011 | MS.gene006930:intron | 35.0% | |
| ! | AGAAGAAGTATGTGACAAAG+CGG | - | chr4.3:27522179-27522198 | MS.gene006930:intron | 35.0% |
| ! | AGGCAATATCAGAGAGTTTT+GGG | - | chr4.3:27521766-27521785 | MS.gene006930:CDS | 35.0% |
| ! | ATCGAAGCATCATAGACAAA+TGG | + | chr4.3:27521990-27522009 | None:intergenic | 35.0% |
| ! | CACTAAACTTCAACTAGCTT+TGG | - | chr4.3:27523982-27524001 | MS.gene006930:CDS | 35.0% |
| ! | TATGATGCTTCGATAATGGT+AGG | - | chr4.3:27521996-27522015 | MS.gene006930:intron | 35.0% |
| ! | TCTCCTTGATGATTTCTCTT+AGG | + | chr4.3:27522296-27522315 | None:intergenic | 35.0% |
| ! | TGGATTTTCCTTCAACACAA+TGG | + | chr4.3:27523406-27523425 | None:intergenic | 35.0% |
| ! | TTTTTACAAAAAGGGACGGA+GGG | - | chr4.3:27524433-27524452 | MS.gene006930:CDS | 35.0% |
| !! | CTTCCTTTTAACTCATAAGC+TGG | - | chr4.3:27522928-27522947 | MS.gene006930:CDS | 35.0% |
| !!! | TTTTTTACAAAAAGGGACGG+AGG | - | chr4.3:27524432-27524451 | MS.gene006930:CDS | 35.0% |
| AACTCCACTTAAGGGATTTC+AGG | - | chr4.3:27522341-27522360 | MS.gene006930:intron | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | - | chr4.3:27524619-27524638 | MS.gene006930:CDS | 40.0% | |
| AAGAACTGGACAAGATTAGG+AGG | - | chr4.3:27521661-27521680 | MS.gene006930:CDS | 40.0% | |
| AAGATTAGGAGGCTTCAGAA+TGG | - | chr4.3:27521672-27521691 | MS.gene006930:CDS | 40.0% | |
| AATATGGTTGGGTACACATG+AGG | - | chr4.3:27524566-27524585 | MS.gene006930:CDS | 40.0% | |
| AATGTGCTCATGAAACAAGC+TGG | + | chr4.3:27521960-27521979 | None:intergenic | 40.0% | |
| AATTAGCAATGCCTGCACTA+TGG | - | chr4.3:27522538-27522557 | MS.gene006930:CDS | 40.0% | |
| ACACACTGTCATTCTTTGCT+AGG | - | chr4.3:27521522-27521541 | MS.gene006930:CDS | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | - | chr4.3:27524230-27524249 | MS.gene006930:intron | 40.0% | |
| ATATAATCAAGGGGCCTACA+TGG | - | chr4.3:27523747-27523766 | MS.gene006930:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | - | chr4.3:27523790-27523809 | MS.gene006930:intron | 40.0% | |
| ATTGAATAGGGCATAAGGCA+AGG | + | chr4.3:27522438-27522457 | None:intergenic | 40.0% | |
| CAAACCTGAAATCCCTTAAG+TGG | + | chr4.3:27522348-27522367 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | - | chr4.3:27523536-27523555 | MS.gene006930:intron | 40.0% | |
| CACCATTGTTTATACCGTGT+TGG | - | chr4.3:27523495-27523514 | MS.gene006930:intron | 40.0% | |
| CACTCAAATAACCATAGTGC+AGG | + | chr4.3:27522552-27522571 | None:intergenic | 40.0% | |
| CAGTTTAACCATGACTCAGA+CGG | - | chr4.3:27522611-27522630 | MS.gene006930:intron | 40.0% | |
| CATAAGCTGGCATAAAGCAT+AGG | - | chr4.3:27522941-27522960 | MS.gene006930:CDS | 40.0% | |
| CCATGAATTGACCCTGTTTA+CGG | - | chr4.3:27522648-27522667 | MS.gene006930:intron | 40.0% | |
| CCTCGAAATGCTAAAGCAAA+AGG | - | chr4.3:27523898-27523917 | MS.gene006930:intron | 40.0% | |
| CTGCACTATGGTTATTTGAG+TGG | - | chr4.3:27522550-27522569 | MS.gene006930:intron | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | + | chr4.3:27524606-27524625 | None:intergenic | 40.0% | |
| GCACCTAAGAGAAATCATCA+AGG | - | chr4.3:27522290-27522309 | MS.gene006930:intron | 40.0% | |
| GGAACTACGGCATTTATGAT+AGG | - | chr4.3:27522472-27522491 | MS.gene006930:CDS | 40.0% | |
| GGTTGTATGGTGTTCGATAT+GGG | - | chr4.3:27521921-27521940 | MS.gene006930:intron | 40.0% | |
| GTGCTTATAAATAGAGGCGA+AGG | + | chr4.3:27524351-27524370 | None:intergenic | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | - | chr4.3:27523159-27523178 | MS.gene006930:CDS | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | - | chr4.3:27524229-27524248 | MS.gene006930:intron | 40.0% | |
| TGACATACTTGTACGAGCAT+CGG | + | chr4.3:27523445-27523464 | None:intergenic | 40.0% | |
| TGACATTTCGGTAACCAACA+CGG | + | chr4.3:27523512-27523531 | None:intergenic | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | + | chr4.3:27523216-27523235 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | + | chr4.3:27524607-27524626 | None:intergenic | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | + | chr4.3:27523896-27523915 | None:intergenic | 40.0% | |
| TGGTTGTATGGTGTTCGATA+TGG | - | chr4.3:27521920-27521939 | MS.gene006930:intron | 40.0% | |
| TGTTGATACAAATGACACCC+CGG | - | chr4.3:27524269-27524288 | MS.gene006930:intron | 40.0% | |
| TTCAAACCATTACGCGTGTA+AGG | + | chr4.3:27522120-27522139 | None:intergenic | 40.0% | |
| TTGAATAGGGCATAAGGCAA+GGG | + | chr4.3:27522437-27522456 | None:intergenic | 40.0% | |
| TTTCCTTCTCTATGAGTGAG+TGG | + | chr4.3:27522803-27522822 | None:intergenic | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | + | chr4.3:27524290-27524309 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | + | chr4.3:27523901-27523920 | None:intergenic | 40.0% |
| ! | CTGCTTTAAACCACTAGAAC+CGG | + | chr4.3:27522594-27522613 | None:intergenic | 40.0% |
| ! | GAAGCATCATAGACAAATGG+AGG | + | chr4.3:27521987-27522006 | None:intergenic | 40.0% |
| ! | GAGGCAATATCAGAGAGTTT+TGG | - | chr4.3:27521765-27521784 | MS.gene006930:CDS | 40.0% |
| ! | GGCAATATCAGAGAGTTTTG+GGG | - | chr4.3:27521767-27521786 | MS.gene006930:CDS | 40.0% |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | - | chr4.3:27524774-27524793 | MS.gene006930:CDS | 40.0% |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | + | chr4.3:27523265-27523284 | None:intergenic | 40.0% |
| !! | GGGTGTCATTTGTATCAACA+AGG | + | chr4.3:27524269-27524288 | None:intergenic | 40.0% |
| !!! | TTTATAAGCACGTTTTGGGG+AGG | - | chr4.3:27524360-27524379 | MS.gene006930:CDS | 40.0% |
| AATGGCTGCCATTGTGTTGA+AGG | - | chr4.3:27523395-27523414 | MS.gene006930:intron | 45.0% | |
| AATTTAGACCCTGTGACTCG+AGG | + | chr4.3:27521867-27521886 | None:intergenic | 45.0% | |
| ACATGACCTAGAGGTCTCAT+TGG | - | chr4.3:27522724-27522743 | MS.gene006930:CDS | 45.0% | |
| ACTCTCTGATATTGCCTCCA+CGG | + | chr4.3:27521763-27521782 | None:intergenic | 45.0% | |
| ATCCAACCAATGAGACCTCT+AGG | + | chr4.3:27522733-27522752 | None:intergenic | 45.0% | |
| ATTTAGACCCTGTGACTCGA+GGG | + | chr4.3:27521866-27521885 | None:intergenic | 45.0% | |
| CATGACTCAGACGGTTCAAT+CGG | - | chr4.3:27522620-27522639 | MS.gene006930:intron | 45.0% | |
| CATTTGCCTTACACGCGTAA+TGG | - | chr4.3:27522111-27522130 | MS.gene006930:intron | 45.0% | |
| CCGTAAACAGGGTCAATTCA+TGG | + | chr4.3:27522651-27522670 | None:intergenic | 45.0% | |
| GACACCCTAACATTCTCAAC+AGG | + | chr4.3:27521831-27521850 | None:intergenic | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+TGG | - | chr4.3:27523540-27523559 | MS.gene006930:intron | 45.0% | |
| GGATGTTAGAGGAGTTGCAT+TGG | - | chr4.3:27521698-27521717 | MS.gene006930:CDS | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | - | chr4.3:27524241-27524260 | MS.gene006930:intron | 45.0% | |
| GTTAGAGGAGTTGCATTGGA+AGG | - | chr4.3:27521702-27521721 | MS.gene006930:CDS | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | - | chr4.3:27523230-27523249 | MS.gene006930:intron | 45.0% | |
| TAGGAGGCTTCAGAATGGTT+CGG | - | chr4.3:27521677-27521696 | MS.gene006930:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | - | chr4.3:27524636-27524655 | MS.gene006930:CDS | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | + | chr4.3:27523231-27523250 | None:intergenic | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | + | chr4.3:27523426-27523445 | None:intergenic | 45.0% | |
| TCTCCACTCACTCATAGAGA+AGG | - | chr4.3:27522797-27522816 | MS.gene006930:CDS | 45.0% | |
| TCTCTGCATCTCAAACCTGA+TGG | - | chr4.3:27523198-27523217 | MS.gene006930:intron | 45.0% | |
| TGCTAAAGCAAAAGGATCGG+AGG | - | chr4.3:27523906-27523925 | MS.gene006930:intron | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | + | chr4.3:27524289-27524308 | None:intergenic | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | - | chr4.3:27524622-27524641 | MS.gene006930:CDS | 45.0% | |
| TTGTTGCTATACAGGAAGGG+AGG | - | chr4.3:27524190-27524209 | MS.gene006930:intron | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | - | chr4.3:27523802-27523821 | MS.gene006930:intron | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | - | chr4.3:27523803-27523822 | MS.gene006930:intron | 45.0% |
| ! | CAGAATGGTTCGGATGTTAG+AGG | - | chr4.3:27521687-27521706 | MS.gene006930:CDS | 45.0% |
| ! | GAGAATGTTAGGGTGTCTCT+TGG | - | chr4.3:27521834-27521853 | MS.gene006930:intron | 45.0% |
| ! | GAGCGATCACAGTTTCGTTT+TGG | - | chr4.3:27522682-27522701 | MS.gene006930:intron | 45.0% |
| ! | GCAATTTTGTCCTCGGGATT+GGG | + | chr4.3:27523243-27523262 | None:intergenic | 45.0% |
| ! | GGTCTCATTGGTTGGATGTT+CGG | - | chr4.3:27522736-27522755 | MS.gene006930:CDS | 45.0% |
| ! | GTGCAGGCATTGCTAATTCA+TGG | + | chr4.3:27522536-27522555 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | + | chr4.3:27523250-27523269 | None:intergenic | 45.0% |
| ! | TTGAGTGTTGCAGTGTTTGC+CGG | - | chr4.3:27521885-27521904 | MS.gene006930:intron | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | + | chr4.3:27523193-27523212 | None:intergenic | 45.0% |
| !! | AAGCTTGGTGCAGATACCTT+TGG | - | chr4.3:27523174-27523193 | MS.gene006930:CDS | 45.0% |
| !! | AGTAGTGGTGGATGAAGAAC+TGG | - | chr4.3:27521647-27521666 | MS.gene006930:intron | 45.0% |
| !! | TGTACGAGCATCGGTTACTA+TGG | + | chr4.3:27523436-27523455 | None:intergenic | 45.0% |
| !! | TTTGGGGAGTGGGTTATCAA+TGG | - | chr4.3:27521783-27521802 | MS.gene006930:intron | 45.0% |
| !!! | ATCAGAGAGTTTTGGGGAGT+GGG | - | chr4.3:27521773-27521792 | MS.gene006930:intron | 45.0% |
| !!! | TATCAGAGAGTTTTGGGGAG+TGG | - | chr4.3:27521772-27521791 | MS.gene006930:intron | 45.0% |
| AATGCTGGAAACGGTTCAGG+AGG | - | chr4.3:27523126-27523145 | MS.gene006930:CDS | 50.0% | |
| ATACAGGAAGGGAGGCTTGA+AGG | - | chr4.3:27524198-27524217 | MS.gene006930:intron | 50.0% | |
| CATGAAACAAGCTGGTGTGG+TGG | + | chr4.3:27521952-27521971 | None:intergenic | 50.0% | |
| CGAACACCATACAACCAGCA+CGG | + | chr4.3:27521917-27521936 | None:intergenic | 50.0% | |
| CGATTGAACCGTCTGAGTCA+TGG | + | chr4.3:27522622-27522641 | None:intergenic | 50.0% | |
| GAACACCATACAACCAGCAC+GGG | + | chr4.3:27521916-27521935 | None:intergenic | 50.0% | |
| GACCTAGAGGTCTCATTGGT+TGG | - | chr4.3:27522728-27522747 | MS.gene006930:CDS | 50.0% | |
| GATACCGATGTGGACAGAAG+CGG | - | chr4.3:27523321-27523340 | MS.gene006930:intron | 50.0% | |
| GCTCATGAAACAAGCTGGTG+TGG | + | chr4.3:27521955-27521974 | None:intergenic | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | - | chr4.3:27524240-27524259 | MS.gene006930:intron | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | - | chr4.3:27523808-27523827 | MS.gene006930:intron | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | - | chr4.3:27523123-27523142 | MS.gene006930:CDS | 50.0% | |
| GTTGCATTGGAAGGCGAGAA+AGG | - | chr4.3:27521711-27521730 | MS.gene006930:CDS | 50.0% | |
| TAATCAAGGGGCCTACATGG+TGG | - | chr4.3:27523750-27523769 | MS.gene006930:intron | 50.0% | |
| TACAGGAAGGGAGGCTTGAA+GGG | - | chr4.3:27524199-27524218 | MS.gene006930:intron | 50.0% | |
| TCCCGAGGACAAAATTGCCA+TGG | - | chr4.3:27523245-27523264 | MS.gene006930:intron | 50.0% | |
| ! | CACTTTCGTTCCGGTTCTAG+TGG | - | chr4.3:27522581-27522600 | MS.gene006930:intron | 50.0% |
| ! | GCCATGGCAATTTTGTCCTC+GGG | + | chr4.3:27523249-27523268 | None:intergenic | 50.0% |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | + | chr4.3:27523244-27523263 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | - | chr4.3:27523339-27523358 | MS.gene006930:intron | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | - | chr4.3:27523340-27523359 | MS.gene006930:intron | 50.0% |
| GGGTGGGAGTTAGACTCATG+TGG | - | chr4.3:27524219-27524238 | MS.gene006930:intron | 55.0% | |
| GTTCGGTCGCACTTTCGTTC+CGG | - | chr4.3:27522572-27522591 | MS.gene006930:intron | 55.0% | |
| TCTGATATTGCCTCCACGGC+AGG | + | chr4.3:27521759-27521778 | None:intergenic | 55.0% | |
| !! | AGGGACGGAGGGAGTATTCT+AGG | - | chr4.3:27524444-27524463 | MS.gene006930:CDS | 55.0% |
| !! | TCTTGCCCGTGCTGGTTGTA+TGG | - | chr4.3:27521908-27521927 | MS.gene006930:intron | 55.0% |
| ACAACCAGCACGGGCAAGAC+CGG | + | chr4.3:27521907-27521926 | None:intergenic | 60.0% | |
| AGGAAGGGAGGCTTGAAGGG+TGG | - | chr4.3:27524202-27524221 | MS.gene006930:intron | 60.0% | |
| CACGCCGCTTCTGTCCACAT+CGG | + | chr4.3:27523328-27523347 | None:intergenic | 60.0% | |
| GATATTGCCTCCACGGCAGG+AGG | + | chr4.3:27521756-27521775 | None:intergenic | 60.0% | |
| GGAAGGGAGGCTTGAAGGGT+GGG | - | chr4.3:27524203-27524222 | MS.gene006930:intron | 60.0% | |
| CCTCCACGGCAGGAGGAGTA+AGG | + | chr4.3:27521749-27521768 | None:intergenic | 65.0% | |
| CCTTACTCCTCCTGCCGTGG+AGG | - | chr4.3:27521746-27521765 | MS.gene006930:CDS | 65.0% | |
| CGACCTTACTCCTCCTGCCG+TGG | - | chr4.3:27521743-27521762 | MS.gene006930:CDS | 65.0% | |
| CGATGTGGACAGAAGCGGCG+TGG | - | chr4.3:27523326-27523345 | MS.gene006930:intron | 65.0% | |
| GACGCGACCCTCGAGTCACA+GGG | - | chr4.3:27521856-27521875 | MS.gene006930:intron | 65.0% | |
| TTTGCCGGTCTTGCCCGTGC+TGG | - | chr4.3:27521900-27521919 | MS.gene006930:intron | 65.0% | |
| ! | AGGGGGGCTGACTTCACTGG+CGG | - | chr4.3:27522155-27522174 | MS.gene006930:intron | 65.0% |
| ! | GAGAGGGGGGCTGACTTCAC+TGG | - | chr4.3:27522152-27522171 | MS.gene006930:intron | 65.0% |
| GGACGCGACCCTCGAGTCAC+AGG | - | chr4.3:27521855-27521874 | MS.gene006930:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 27521465 | 27524860 | 27521465 | ID=MS.gene006930 |
| chr4.3 | mRNA | 27521465 | 27524860 | 27521465 | ID=MS.gene006930.t1;Parent=MS.gene006930 |
| chr4.3 | exon | 27524308 | 27524860 | 27524308 | ID=MS.gene006930.t1.exon1;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27524308 | 27524860 | 27524308 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27523963 | 27524168 | 27523963 | ID=MS.gene006930.t1.exon2;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27523963 | 27524168 | 27523963 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27522692 | 27523208 | 27522692 | ID=MS.gene006930.t1.exon3;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27522692 | 27523208 | 27522692 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27522368 | 27522567 | 27522368 | ID=MS.gene006930.t1.exon4;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27522368 | 27522567 | 27522368 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27522009 | 27522121 | 27522009 | ID=MS.gene006930.t1.exon5;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27522009 | 27522121 | 27522009 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27521648 | 27521788 | 27521648 | ID=MS.gene006930.t1.exon6;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27521648 | 27521788 | 27521648 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| chr4.3 | exon | 27521465 | 27521546 | 27521465 | ID=MS.gene006930.t1.exon7;Parent=MS.gene006930.t1 |
| chr4.3 | CDS | 27521465 | 27521546 | 27521465 | ID=cds.MS.gene006930.t1;Parent=MS.gene006930.t1 |
| Gene Sequence |
| Protein sequence |
