Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005970.t1 | XP_003591897.1 | 98 | 615 | 12 | 0 | 1 | 615 | 1 | 615 | 0.00E+00 | 1191.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005970.t1 | P40390 | 27.8 | 486 | 284 | 17 | 98 | 581 | 13 | 433 | 2.2e-34 | 148.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005970.t1 | G7I385 | 98.0 | 615 | 12 | 0 | 1 | 615 | 1 | 615 | 0.0e+00 | 1191.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059512 | MS.gene005970 | PPI |
| MS.gene071520 | MS.gene005970 | PPI |
| MS.gene56074 | MS.gene005970 | PPI |
| MS.gene071517 | MS.gene005970 | PPI |
| MS.gene006930 | MS.gene005970 | PPI |
| MS.gene56402 | MS.gene005970 | PPI |
| MS.gene56072 | MS.gene005970 | PPI |
| MS.gene56403 | MS.gene005970 | PPI |
| MS.gene56071 | MS.gene005970 | PPI |
| MS.gene071519 | MS.gene005970 | PPI |
| MS.gene071518 | MS.gene005970 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005970.t1 | MTR_1g094980 | 98.049 | 615 | 12 | 0 | 1 | 615 | 1 | 615 | 0.0 | 1233 |
| MS.gene005970.t1 | MTR_1g094980 | 98.706 | 541 | 7 | 0 | 75 | 615 | 3 | 543 | 0.0 | 1080 |
| MS.gene005970.t1 | MTR_4g084270 | 41.256 | 589 | 298 | 14 | 59 | 613 | 41 | 615 | 1.67e-130 | 397 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005970.t1 | AT5G17530 | 73.573 | 613 | 157 | 4 | 6 | 615 | 3 | 613 | 0.0 | 908 |
| MS.gene005970.t1 | AT5G17530 | 70.801 | 637 | 157 | 5 | 6 | 615 | 3 | 637 | 0.0 | 896 |
| MS.gene005970.t1 | AT5G17530 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| MS.gene005970.t1 | AT5G17530 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| MS.gene005970.t1 | AT5G17530 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| MS.gene005970.t1 | AT5G17530 | 75.601 | 582 | 140 | 2 | 34 | 615 | 1 | 580 | 0.0 | 892 |
| MS.gene005970.t1 | AT5G17530 | 78.558 | 541 | 114 | 2 | 75 | 615 | 3 | 541 | 0.0 | 867 |
| MS.gene005970.t1 | AT1G70820 | 43.726 | 526 | 250 | 11 | 86 | 581 | 66 | 575 | 4.61e-132 | 400 |
| MS.gene005970.t1 | AT1G70820 | 41.844 | 564 | 276 | 12 | 86 | 614 | 66 | 612 | 1.22e-131 | 399 |
Find 157 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCAGATAAGAGTTTC+TGG | 0.182408 | 1.3:-66211242 | MS.gene005970:intron |
| CTTTAAGATCTTGATGGTTT+TGG | 0.199444 | 1.3:+66211680 | None:intergenic |
| CTGTATCTTTCAGATCTTTC+CGG | 0.217191 | 1.3:-66211575 | MS.gene005970:intron |
| TGTCCTCGGGATTGGGGATA+TGG | 0.229075 | 1.3:+66213211 | None:intergenic |
| CTTGCTTCTGCAAGAGCTTC+TGG | 0.256356 | 1.3:-66211790 | MS.gene005970:CDS |
| GCTGTCTTGTCCTCGGGATT+GGG | 0.263026 | 1.3:+66213204 | None:intergenic |
| TGCTGTCTTGTCCTCGGGAT+TGG | 0.272046 | 1.3:+66213203 | None:intergenic |
| GAGCTCTTAAGGAGAATAAT+TGG | 0.279187 | 1.3:-66212062 | MS.gene005970:CDS |
| GGAAGCGAGTTGCGCATATA+AGG | 0.282315 | 1.3:+66216671 | None:intergenic |
| TTCAGATCTTTCCGGGAGTA+TGG | 0.288519 | 1.3:-66211567 | MS.gene005970:intron |
| TTCACCAATGCTGGTGGTCT+TGG | 0.294398 | 1.3:-66214398 | MS.gene005970:CDS |
| AATTTAGACCTGTAGCAATT+TGG | 0.300999 | 1.3:+66215813 | None:intergenic |
| AACTCGCTTCCCTCTCCTTC+AGG | 0.309258 | 1.3:-66216659 | MS.gene005970:CDS |
| CAAAACCATCAAGATCTTAA+AGG | 0.316228 | 1.3:-66211679 | MS.gene005970:CDS |
| CATACCCCTTCATAGTTTAC+AGG | 0.325411 | 1.3:+66211483 | None:intergenic |
| GCGATTTCTCGAGGTCTTGC+TGG | 0.334136 | 1.3:-66215336 | MS.gene005970:CDS |
| TCCCTGCATCAACAACTATA+TGG | 0.338345 | 1.3:+66213741 | None:intergenic |
| ACCCTCCTTTAAGATCTTGA+TGG | 0.345920 | 1.3:+66211674 | None:intergenic |
| CAAGATCAGCTTTGTTATCA+AGG | 0.346861 | 1.3:+66213157 | None:intergenic |
| GCTCCTATTGCTTCAGCAAC+AGG | 0.355574 | 1.3:+66215925 | None:intergenic |
| GTAGCAATTTGGCGGATATC+CGG | 0.369612 | 1.3:+66215824 | None:intergenic |
| CATCTGCCTTTCAACAGAAA+TGG | 0.370069 | 1.3:-66214431 | MS.gene005970:CDS |
| TTTCTATTGGCCATGATTCC+CGG | 0.370362 | 1.3:-66215843 | MS.gene005970:CDS |
| GCAGCTGTAAAGGAGTTTGC+AGG | 0.375282 | 1.3:-66211020 | MS.gene005970:CDS |
| CTTGATAACAAAGCTGATCT+TGG | 0.375462 | 1.3:-66213156 | MS.gene005970:CDS |
| CTGCAGCAAAAGCTGGTTCC+TGG | 0.381781 | 1.3:+66211722 | None:intergenic |
| TCACCAATGCTGGTGGTCTT+GGG | 0.385644 | 1.3:-66214397 | MS.gene005970:CDS |
| GAATCGTTTGATCGCCTTGA+TGG | 0.385794 | 1.3:-66212998 | MS.gene005970:CDS |
| ACCCATAGTGGACAACTTCT+AGG | 0.386131 | 1.3:+66215307 | None:intergenic |
| TGTATCTTTCAGATCTTTCC+GGG | 0.387466 | 1.3:-66211574 | MS.gene005970:intron |
| GGCCTAGAAGTTGTCCACTA+TGG | 0.388207 | 1.3:-66215309 | MS.gene005970:CDS |
| CAAAGGTGCTGGAACCTCTT+GGG | 0.392597 | 1.3:-66213361 | MS.gene005970:CDS |
| TTTCATTGCTGTCTTGTCCT+CGG | 0.401263 | 1.3:+66213197 | None:intergenic |
| GAGTGGACATGGAGCTCTTA+AGG | 0.402258 | 1.3:-66212073 | MS.gene005970:CDS |
| TTCCATATAGTTGTTGATGC+AGG | 0.410833 | 1.3:-66213743 | MS.gene005970:CDS |
| TTCATTGCTGTCTTGTCCTC+GGG | 0.416993 | 1.3:+66213198 | None:intergenic |
| TCGGGATTGGGGATATGGTT+TGG | 0.417838 | 1.3:+66213216 | None:intergenic |
| CAGCATTTGAGAGTTTCTAT+TGG | 0.418225 | 1.3:-66215856 | MS.gene005970:CDS |
| TATTGCTGACAGAACTCTAT+TGG | 0.418859 | 1.3:-66212123 | MS.gene005970:intron |
| GAAGCGAGTTGCGCATATAA+GGG | 0.421286 | 1.3:+66216672 | None:intergenic |
| CCTCTTGGGGCAATAACTTC+TGG | 0.422876 | 1.3:-66213347 | MS.gene005970:CDS |
| TCACTGGCCGTGAGTTCAAC+CGG | 0.426822 | 1.3:-66213020 | MS.gene005970:CDS |
| TCTTGATGGTGTCGAGGGAG+AGG | 0.430042 | 1.3:-66215965 | MS.gene005970:CDS |
| GACGGGTCTATTATGATAAC+AGG | 0.433152 | 1.3:-66214742 | MS.gene005970:intron |
| GAACCTGTTGCTGAAGCAAT+AGG | 0.435275 | 1.3:-66215928 | MS.gene005970:CDS |
| TGATCCGACAAATTTGTTCA+AGG | 0.437587 | 1.3:+66210983 | None:intergenic |
| CCGGGAAGTAAAATCGTTCA+AGG | 0.440436 | 1.3:+66216583 | None:intergenic |
| TCTAAGATATCTTTGATGTC+AGG | 0.441688 | 1.3:+66214371 | None:intergenic |
| AAGTCAGTCATGTCAAGATA+TGG | 0.443959 | 1.3:+66216237 | None:intergenic |
| CTTGATGGTGTCGAGGGAGA+GGG | 0.444076 | 1.3:-66215964 | MS.gene005970:CDS |
| TCAAGGCGATCAAACGATTC+CGG | 0.449493 | 1.3:+66213001 | None:intergenic |
| CTCAGTTCTGCAGCAAAAGC+TGG | 0.450071 | 1.3:+66211715 | None:intergenic |
| GCAATAGGAGCTGCTTTCGC+TGG | 0.450521 | 1.3:-66215913 | MS.gene005970:CDS |
| GCAAAGGTGCTGGAACCTCT+TGG | 0.455133 | 1.3:-66213362 | MS.gene005970:CDS |
| AACGAAGATGCTGTGAAGCT+TGG | 0.455757 | 1.3:-66211056 | MS.gene005970:CDS |
| GCCTAGAAGTTGTCCACTAT+GGG | 0.459618 | 1.3:-66215308 | MS.gene005970:intron |
| ATACGTGGTGTGGCTCTTGA+TGG | 0.460624 | 1.3:-66215979 | MS.gene005970:CDS |
| CATTGCAGAGAATATTTCTC+CGG | 0.466369 | 1.3:+66216564 | None:intergenic |
| AGAAACTGTGCTGAAACATT+TGG | 0.467221 | 1.3:-66211544 | MS.gene005970:CDS |
| GACTCAACTGTCTATTCTGT+TGG | 0.467339 | 1.3:+66216711 | None:intergenic |
| TTCTAAAGCTTCAAAACGGC+AGG | 0.471232 | 1.3:-66216215 | MS.gene005970:intron |
| ATCATAATAGACCCGTCAAC+AGG | 0.471820 | 1.3:+66214748 | None:intergenic |
| TATCATTCTGCCTAGCATCC+TGG | 0.472339 | 1.3:-66212874 | MS.gene005970:intron |
| AACGATTCCGGTTGAACTCA+CGG | 0.472416 | 1.3:+66213013 | None:intergenic |
| TTGAATCCATTTCTGTTGAA+AGG | 0.472893 | 1.3:+66214425 | None:intergenic |
| TGTTGTGCTTGCAGCTGTAA+AGG | 0.473841 | 1.3:-66211030 | MS.gene005970:CDS |
| AAAGCAGTTCGCAAAGCAGC+TGG | 0.477285 | 1.3:-66214230 | MS.gene005970:CDS |
| ACTCGCTTCCCTCTCCTTCA+GGG | 0.477507 | 1.3:-66216658 | MS.gene005970:CDS |
| TGCTTTCGCTGGATGGTTGG+TGG | 0.478863 | 1.3:-66215902 | MS.gene005970:CDS |
| TAGCAATTTGGCGGATATCC+GGG | 0.479076 | 1.3:+66215825 | None:intergenic |
| CTCCTTCAGGGAAGTTGACA+TGG | 0.480523 | 1.3:-66216646 | MS.gene005970:CDS |
| TCTCGAGGTCTTGCTGGTGC+CGG | 0.481744 | 1.3:-66215330 | MS.gene005970:CDS |
| AGCTGCTTTCGCTGGATGGT+TGG | 0.482899 | 1.3:-66215905 | MS.gene005970:CDS |
| CTCTGATCCAAACCTGCAAA+AGG | 0.483664 | 1.3:-66211508 | MS.gene005970:CDS |
| TCTCAGGTGGCAAACATCAC+CGG | 0.486810 | 1.3:-66212635 | MS.gene005970:intron |
| GATTGATGAAGCTATTCGTT+TGG | 0.490091 | 1.3:-66212589 | MS.gene005970:intron |
| AAGGCTCCTGTAAACTATGA+AGG | 0.491458 | 1.3:-66211489 | MS.gene005970:CDS |
| ACATTTATTGAAAAGAAACT+TGG | 0.493165 | 1.3:-66212808 | MS.gene005970:intron |
| TAGGAGCTGCTTTCGCTGGA+TGG | 0.498666 | 1.3:-66215909 | MS.gene005970:CDS |
| CAGATAAGAGTTTCTGGCTA+TGG | 0.500953 | 1.3:-66211236 | MS.gene005970:CDS |
| TCTGCAAGAGCTTCTGGTGT+AGG | 0.505537 | 1.3:-66211784 | MS.gene005970:CDS |
| TTTGTTATCAAGGACTGCCT+TGG | 0.505639 | 1.3:+66213167 | None:intergenic |
| TCTGTGACAATAGTTGTTCC+AGG | 0.506883 | 1.3:+66212856 | None:intergenic |
| CTGTCTTGTCCTCGGGATTG+GGG | 0.509666 | 1.3:+66213205 | None:intergenic |
| TTAGACCTGTAGCAATTTGG+CGG | 0.514455 | 1.3:+66215816 | None:intergenic |
| TCAGCCTTGAACAAATTTGT+CGG | 0.515210 | 1.3:-66210987 | MS.gene005970:CDS |
| AGGCTCCTGTAAACTATGAA+GGG | 0.516647 | 1.3:-66211488 | MS.gene005970:CDS |
| TGAATAATAGGCAAAGGTGC+TGG | 0.516726 | 1.3:-66213372 | MS.gene005970:intron |
| TTTCATCACATCCACATGGC+AGG | 0.519002 | 1.3:-66217414 | None:intergenic |
| GCACAGTTTCTCCATACTCC+CGG | 0.519881 | 1.3:+66211556 | None:intergenic |
| TCCATATAGTTGTTGATGCA+GGG | 0.521303 | 1.3:-66213742 | MS.gene005970:CDS |
| TCCGCTGCTGTGGATTTCAC+TGG | 0.522447 | 1.3:-66213036 | MS.gene005970:CDS |
| GCAAGAGCTTCTGGTGTAGG+TGG | 0.525871 | 1.3:-66211781 | MS.gene005970:CDS |
| GACTTTCTAAAGCTTCAAAA+CGG | 0.526949 | 1.3:-66216219 | MS.gene005970:CDS |
| GCAATTGAAACGAGTGGACA+TGG | 0.527794 | 1.3:-66212084 | MS.gene005970:CDS |
| TGGCGGATATCCGGGAATCA+TGG | 0.527906 | 1.3:+66215833 | None:intergenic |
| ATAGTTGTTGATGCAGGGAA+TGG | 0.529461 | 1.3:-66213737 | MS.gene005970:CDS |
| TTGATGGTGTCGAGGGAGAG+GGG | 0.533354 | 1.3:-66215963 | MS.gene005970:CDS |
| GATATCCGCCAAATTGCTAC+AGG | 0.533406 | 1.3:-66215821 | MS.gene005970:intron |
| ATAAGAGTTTCTGGCTATGG+TGG | 0.535196 | 1.3:-66211233 | MS.gene005970:CDS |
| AAGAGCAATAGCTGCCATCA+AGG | 0.536219 | 1.3:+66212984 | None:intergenic |
| TGGTCTAATAGAAGGACTCC+AGG | 0.537063 | 1.3:-66211740 | MS.gene005970:CDS |
| AAAGGTGCTGGAACCTCTTG+GGG | 0.537634 | 1.3:-66213360 | MS.gene005970:CDS |
| TAAGAGGAAGTACAGGATCA+TGG | 0.537973 | 1.3:+66211186 | None:intergenic |
| TCAGGGAAGTTGACATGGAC+TGG | 0.538210 | 1.3:-66216641 | MS.gene005970:CDS |
| TGTACTTCCTCTTAACATTG+AGG | 0.540776 | 1.3:-66211177 | MS.gene005970:intron |
| CTTCCCAAGACCACCAGCAT+TGG | 0.546188 | 1.3:+66214394 | None:intergenic |
| TAAATGTCACCCACCCATAG+TGG | 0.548370 | 1.3:+66215295 | None:intergenic |
| TTCTTCTAGATCCGCTGCTG+TGG | 0.548690 | 1.3:-66213046 | MS.gene005970:intron |
| GAGTTTCTGGCTATGGTGGG+TGG | 0.550099 | 1.3:-66211229 | MS.gene005970:CDS |
| TGATGATGGTGCATACCTAA+TGG | 0.551834 | 1.3:-66212037 | MS.gene005970:intron |
| TCTTTGATACTGATGTGGAC+AGG | 0.554506 | 1.3:-66213128 | MS.gene005970:intron |
| GAGAATAATTGGCTTGATGA+TGG | 0.555579 | 1.3:-66212051 | MS.gene005970:CDS |
| CGCAAAGCAGCTGGAAACAT+AGG | 0.559931 | 1.3:-66214221 | MS.gene005970:intron |
| AGCAATGAAAGCTATAACCA+AGG | 0.561872 | 1.3:-66213184 | MS.gene005970:CDS |
| AGAGCTTCTGGTGTAGGTGG+AGG | 0.563805 | 1.3:-66211778 | MS.gene005970:CDS |
| CGGAGAAATATTCTCTGCAA+TGG | 0.566331 | 1.3:-66216563 | MS.gene005970:intron |
| TCAATGTTAAGAGGAAGTAC+AGG | 0.567339 | 1.3:+66211179 | None:intergenic |
| AGAATAGACAGTTGAGTCGA+AGG | 0.577680 | 1.3:-66216706 | MS.gene005970:CDS |
| CATGGAGTGATAGTCTAAGA+AGG | 0.578399 | 1.3:+66211204 | None:intergenic |
| AACCATCAAGATCTTAAAGG+AGG | 0.579963 | 1.3:-66211676 | MS.gene005970:CDS |
| ACAGACAGTGTGACTTCTGA+TGG | 0.586550 | 1.3:-66212838 | MS.gene005970:CDS |
| GTCAACTTCCCTGAAGGAGA+GGG | 0.588017 | 1.3:+66216650 | None:intergenic |
| AATTATCTTTGATACTGATG+TGG | 0.589127 | 1.3:-66213133 | MS.gene005970:CDS |
| TGACAATGTGCGCAATTGCA+TGG | 0.590504 | 1.3:+66216610 | None:intergenic |
| GTCCATGTCAACTTCCCTGA+AGG | 0.592079 | 1.3:+66216644 | None:intergenic |
| ATTGCAGAGAATATTTCTCC+GGG | 0.592981 | 1.3:+66216565 | None:intergenic |
| TGATGGTGTCGAGGGAGAGG+GGG | 0.593434 | 1.3:-66215962 | MS.gene005970:CDS |
| GGCTCCTGTAAACTATGAAG+GGG | 0.595976 | 1.3:-66211487 | MS.gene005970:intron |
| CGGGAAGTAAAATCGTTCAA+GGG | 0.597552 | 1.3:+66216584 | None:intergenic |
| GAATAGACAGTTGAGTCGAA+GGG | 0.597897 | 1.3:-66216705 | MS.gene005970:CDS |
| AGTGTGCTATTGAACATAGC+TGG | 0.600868 | 1.3:+66214796 | None:intergenic |
| ATAGTGGACAACTTCTAGGC+CGG | 0.601912 | 1.3:+66215311 | None:intergenic |
| ACCATCAAGATCTTAAAGGA+GGG | 0.602735 | 1.3:-66211675 | MS.gene005970:intron |
| GTTGATGCAGGGAATGGAGC+AGG | 0.602757 | 1.3:-66213731 | MS.gene005970:CDS |
| TTTCAGAATGCGATTTCTCG+AGG | 0.606158 | 1.3:-66215345 | MS.gene005970:intron |
| TGTCAACTTCCCTGAAGGAG+AGG | 0.608366 | 1.3:+66216649 | None:intergenic |
| AAGCGAGTTGCGCATATAAG+GGG | 0.616061 | 1.3:+66216673 | None:intergenic |
| TAAGAGTTTCTGGCTATGGT+GGG | 0.619840 | 1.3:-66211232 | MS.gene005970:CDS |
| ATTCTGTTGGCAGCATTGTG+AGG | 0.620771 | 1.3:+66216724 | None:intergenic |
| CCCACAGAGAAACCATTGGA+GGG | 0.622390 | 1.3:-66213767 | MS.gene005970:intron |
| CCAGAAGTTATTGCCCCAAG+AGG | 0.622873 | 1.3:+66213347 | None:intergenic |
| GTGGCTCTTGATGGTGTCGA+GGG | 0.623636 | 1.3:-66215970 | MS.gene005970:CDS |
| GCCCACAGAGAAACCATTGG+AGG | 0.624310 | 1.3:-66213768 | MS.gene005970:intron |
| TCTGCCCACAGAGAAACCAT+TGG | 0.625485 | 1.3:-66213771 | MS.gene005970:intron |
| ACTATATGGAAACCCTCCAA+TGG | 0.625727 | 1.3:+66213755 | None:intergenic |
| TGTGGCTCTTGATGGTGTCG+AGG | 0.626077 | 1.3:-66215971 | MS.gene005970:CDS |
| AAACATCACCGGTTCAAGAG+AGG | 0.631146 | 1.3:-66212624 | MS.gene005970:CDS |
| GCCAGTGAAATCCACAGCAG+CGG | 0.639450 | 1.3:+66213035 | None:intergenic |
| ATATAGTGACATACGTGGTG+TGG | 0.642176 | 1.3:-66215989 | MS.gene005970:intron |
| CATCTAGCAATTGAAACGAG+TGG | 0.654527 | 1.3:-66212090 | MS.gene005970:CDS |
| CTGACAGAACTCTATTGGTG+AGG | 0.662737 | 1.3:-66212118 | MS.gene005970:intron |
| CTTCAGCAACAGGTTCAGTG+AGG | 0.677929 | 1.3:+66215935 | None:intergenic |
| GTTCAATAGCACACTCACAA+AGG | 0.678351 | 1.3:-66214788 | MS.gene005970:CDS |
| GATGCAGGGAATGGAGCAGG+TGG | 0.686283 | 1.3:-66213728 | MS.gene005970:CDS |
| AAACCATATCCCCAATCCCG+AGG | 0.688417 | 1.3:-66213214 | MS.gene005970:CDS |
| AATTTATATAGTGACATACG+TGG | 0.728348 | 1.3:-66215994 | MS.gene005970:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAGTAAAATAG+GGG | - | chr1.3:66213402-66213421 | MS.gene005970:intron | 10.0% |
| !! | AAATAGTTAGAATAATAATA+AGG | + | chr1.3:66213511-66213530 | None:intergenic | 10.0% |
| !! | AATAAAAAAAATAAGCAAAT+GGG | + | chr1.3:66214275-66214294 | None:intergenic | 10.0% |
| !! | ATGAAAGATAAATAAAATAA+TGG | + | chr1.3:66213121-66213140 | None:intergenic | 10.0% |
| !! | TAATAAAAAAAATAAGCAAA+TGG | + | chr1.3:66214276-66214295 | None:intergenic | 10.0% |
| !!! | TATTATTCTAACTATTTTAA+TGG | - | chr1.3:66213514-66213533 | MS.gene005970:intron | 10.0% |
| !! | AAATAAAAAAGTAAAATAGG+GGG | - | chr1.3:66213403-66213422 | MS.gene005970:intron | 15.0% |
| !! | AACTTATATATTATCTACAA+TGG | - | chr1.3:66211884-66211903 | MS.gene005970:intron | 15.0% |
| !! | ATCAGAAAAAAAATATATAC+TGG | - | chr1.3:66214797-66214816 | MS.gene005970:CDS | 15.0% |
| !! | TAAATAAAGTAGATGAATAA+TGG | - | chr1.3:66214487-66214506 | MS.gene005970:intron | 15.0% |
| !! | TAACAGAGAAATATTAATTT+GGG | + | chr1.3:66216408-66216427 | None:intergenic | 15.0% |
| !! | TACTAAATATTTAAATATGG+AGG | - | chr1.3:66216230-66216249 | MS.gene005970:CDS | 15.0% |
| !! | TTAACAGAGAAATATTAATT+TGG | + | chr1.3:66216409-66216428 | None:intergenic | 15.0% |
| !!! | AATTTTAGTAGAGTTTAAAA+GGG | - | chr1.3:66211348-66211367 | MS.gene005970:intron | 15.0% |
| !!! | TATAGAGAGTATAATTAATT+GGG | - | chr1.3:66214937-66214956 | MS.gene005970:intron | 15.0% |
| !!! | TTAACATTTTTGTTTTCTAA+TGG | - | chr1.3:66212062-66212081 | MS.gene005970:CDS | 15.0% |
| !!! | TTTATTTTTACTTTCATCTT+CGG | - | chr1.3:66212825-66212844 | MS.gene005970:CDS | 15.0% |
| !!! | TTTTATTTTTTTCCTGAATT+TGG | + | chr1.3:66213391-66213410 | None:intergenic | 15.0% |
| !! | AAAGCTTATGATAAAATCTA+AGG | + | chr1.3:66215645-66215664 | None:intergenic | 20.0% |
| !! | AAATAGAAATGAAAACTGAA+AGG | - | chr1.3:66216106-66216125 | MS.gene005970:intron | 20.0% |
| !! | AAGCTTATGATAAAATCTAA+GGG | + | chr1.3:66215644-66215663 | None:intergenic | 20.0% |
| !! | AATAGAAATGAAAACTGAAA+GGG | - | chr1.3:66216107-66216126 | MS.gene005970:intron | 20.0% |
| !! | AATGTATCAGTATTTGTATA+AGG | - | chr1.3:66211981-66212000 | MS.gene005970:intron | 20.0% |
| !! | AATTGAGAAATTGAATGAAA+TGG | + | chr1.3:66211010-66211029 | None:intergenic | 20.0% |
| !! | AATTTCTAATATGCAATGAT+TGG | - | chr1.3:66217054-66217073 | MS.gene005970:intron | 20.0% |
| !! | ACATTTATTGAAAAGAAACT+TGG | - | chr1.3:66215571-66215590 | MS.gene005970:intron | 20.0% |
| !! | ATGTATCAGTATTTGTATAA+GGG | - | chr1.3:66211982-66212001 | MS.gene005970:intron | 20.0% |
| !! | ATTGAGAAATTGAATGAAAT+GGG | + | chr1.3:66211009-66211028 | None:intergenic | 20.0% |
| !! | TAATTGGTAAAATAAGTCTT+GGG | + | chr1.3:66216530-66216549 | None:intergenic | 20.0% |
| !!! | AAACCTTCAAAATATTTTGA+AGG | + | chr1.3:66212623-66212642 | None:intergenic | 20.0% |
| !!! | AAAGATCCGAATTTTAAAAT+AGG | - | chr1.3:66213429-66213448 | MS.gene005970:intron | 20.0% |
| !!! | AAGATCCGAATTTTAAAATA+GGG | - | chr1.3:66213430-66213449 | MS.gene005970:intron | 20.0% |
| !!! | AAGTTTCTTTTCAATAAATG+TGG | + | chr1.3:66215572-66215591 | None:intergenic | 20.0% |
| !!! | AATATATACTGGTTTTTCTT+TGG | - | chr1.3:66214808-66214827 | MS.gene005970:CDS | 20.0% |
| !!! | ATATATACTGGTTTTTCTTT+GGG | - | chr1.3:66214809-66214828 | MS.gene005970:CDS | 20.0% |
| !!! | ATTCATTGATACTGATTTTT+AGG | - | chr1.3:66213215-66213234 | MS.gene005970:CDS | 20.0% |
| !!! | ATTTTCTGATATATGAAAGA+TGG | - | chr1.3:66212704-66212723 | MS.gene005970:intron | 20.0% |
| !!! | ATTTTGGAATTGAAAGTATT+GGG | - | chr1.3:66211376-66211395 | MS.gene005970:intron | 20.0% |
| !!! | CTATAGAGAGTATAATTAAT+TGG | - | chr1.3:66214936-66214955 | MS.gene005970:intron | 20.0% |
| !!! | GAATTTTAGTAGAGTTTAAA+AGG | - | chr1.3:66211347-66211366 | MS.gene005970:intron | 20.0% |
| !!! | GATTGTGTCAAATTTTATAA+TGG | - | chr1.3:66212647-66212666 | MS.gene005970:intron | 20.0% |
| !!! | GTATTCTAAAATCTAAATAG+TGG | + | chr1.3:66212309-66212328 | None:intergenic | 20.0% |
| !!! | GTTAAATGTTATTTTTTCTC+AGG | - | chr1.3:66215728-66215747 | MS.gene005970:intron | 20.0% |
| !!! | TACTTTTGATAGTATGTATA+TGG | - | chr1.3:66212955-66212974 | MS.gene005970:intron | 20.0% |
| !!! | TGATTTTTAGGATATATTCT+AGG | - | chr1.3:66213227-66213246 | MS.gene005970:CDS | 20.0% |
| !!! | TGCATAAATTTGTTGTAAAT+GGG | - | chr1.3:66215842-66215861 | MS.gene005970:CDS | 20.0% |
| !!! | TTGATTTATTCTTTAGCTTT+TGG | - | chr1.3:66212033-66212052 | MS.gene005970:intron | 20.0% |
| !!! | TTTGAAAAATTCTGAGATAA+TGG | - | chr1.3:66214070-66214089 | MS.gene005970:intron | 20.0% |
| ! | AAATTGAATGAAATGGGAAA+TGG | + | chr1.3:66211003-66211022 | None:intergenic | 25.0% |
| ! | AACTCAACATTAACAACAAA+TGG | + | chr1.3:66216766-66216785 | None:intergenic | 25.0% |
| ! | AAGCATTTATTGTAGACTTA+TGG | - | chr1.3:66216366-66216385 | MS.gene005970:intron | 25.0% |
| ! | AATTATCTTTGATACTGATG+TGG | - | chr1.3:66215246-66215265 | MS.gene005970:intron | 25.0% |
| ! | AATTTATATAGTGACATACG+TGG | - | chr1.3:66212385-66212404 | MS.gene005970:intron | 25.0% |
| ! | ACAAAAAGCAATAAATGCTA+AGG | + | chr1.3:66214707-66214726 | None:intergenic | 25.0% |
| ! | ACAATAAAGTTATTACCATC+AGG | + | chr1.3:66215074-66215093 | None:intergenic | 25.0% |
| ! | ACACATTCATATAAAAAGCT+TGG | + | chr1.3:66211958-66211977 | None:intergenic | 25.0% |
| ! | ACTATTACAGTTCAGTAAAA+AGG | + | chr1.3:66213728-66213747 | None:intergenic | 25.0% |
| ! | AGAGTATAATTAATTGGGAA+TGG | - | chr1.3:66214942-66214961 | MS.gene005970:intron | 25.0% |
| ! | AGCATTTATTGTAGACTTAT+GGG | - | chr1.3:66216367-66216386 | MS.gene005970:intron | 25.0% |
| ! | ATCGATATCTCTCAAATTTA+CGG | + | chr1.3:66211511-66211530 | None:intergenic | 25.0% |
| ! | ATGATAATAAGAGTCTAGAA+CGG | + | chr1.3:66211843-66211862 | None:intergenic | 25.0% |
| ! | ATTATGATAACAGGTATGTT+AGG | - | chr1.3:66213646-66213665 | MS.gene005970:intron | 25.0% |
| ! | CAATTCTGTCAAAAATCAAA+AGG | + | chr1.3:66212016-66212035 | None:intergenic | 25.0% |
| ! | CACATTCATATAAAAAGCTT+GGG | + | chr1.3:66211957-66211976 | None:intergenic | 25.0% |
| ! | CTAATTGGTAAAATAAGTCT+TGG | + | chr1.3:66216531-66216550 | None:intergenic | 25.0% |
| ! | CTTTATTGTGGGAATAATTT+CGG | - | chr1.3:66215085-66215104 | MS.gene005970:intron | 25.0% |
| ! | GAACATTTCTTTCTATGAAA+TGG | - | chr1.3:66213702-66213721 | MS.gene005970:intron | 25.0% |
| ! | GATGGTAATAACTTTATTGT+GGG | - | chr1.3:66215074-66215093 | MS.gene005970:intron | 25.0% |
| ! | GCTGCAAAATAATAACAATA+CGG | + | chr1.3:66211036-66211055 | None:intergenic | 25.0% |
| ! | TACAATAAATGCTTACCATT+AGG | + | chr1.3:66216360-66216379 | None:intergenic | 25.0% |
| ! | TATCGTAAAAGTCAGATAAA+TGG | - | chr1.3:66215869-66215888 | MS.gene005970:CDS | 25.0% |
| ! | TATCTTTCATTATTTGCGTA+AGG | - | chr1.3:66213131-66213150 | MS.gene005970:CDS | 25.0% |
| ! | TATTGAAAAGAAACTTGGTA+TGG | - | chr1.3:66215576-66215595 | MS.gene005970:intron | 25.0% |
| ! | TCATCAAAAAAATGAAGGTT+TGG | + | chr1.3:66213463-66213482 | None:intergenic | 25.0% |
| ! | TGATGGTAATAACTTTATTG+TGG | - | chr1.3:66215073-66215092 | MS.gene005970:intron | 25.0% |
| ! | TGGTATGGACAAATTTAAAT+TGG | - | chr1.3:66215591-66215610 | MS.gene005970:intron | 25.0% |
| ! | TTACAACAAATTTATGCACA+AGG | + | chr1.3:66215840-66215859 | None:intergenic | 25.0% |
| ! | TTACACCTTTATTAGATTTC+TGG | + | chr1.3:66211588-66211607 | None:intergenic | 25.0% |
| !! | ATTAAACTCGCATAACATTT+TGG | - | chr1.3:66213272-66213291 | MS.gene005970:intron | 25.0% |
| !! | ATTGTGAGGTAAAAACATTT+TGG | + | chr1.3:66211644-66211663 | None:intergenic | 25.0% |
| !! | CAAGTATTTTGTGTTAAAAG+AGG | - | chr1.3:66212788-66212807 | MS.gene005970:intron | 25.0% |
| !! | TAGTGACAACAACATTTTAT+TGG | + | chr1.3:66216016-66216035 | None:intergenic | 25.0% |
| !! | TCTTTTCAATAAATGTGGTA+AGG | + | chr1.3:66215567-66215586 | None:intergenic | 25.0% |
| !! | TTATCTGACTTTTACGATAA+GGG | + | chr1.3:66215868-66215887 | None:intergenic | 25.0% |
| !! | TTTATCTGACTTTTACGATA+AGG | + | chr1.3:66215869-66215888 | None:intergenic | 25.0% |
| !!! | AAATGTTATTTTTTCTCAGG+TGG | - | chr1.3:66215731-66215750 | MS.gene005970:intron | 25.0% |
| !!! | ACCTTCATTTTTTTGATGAT+AGG | - | chr1.3:66213464-66213483 | MS.gene005970:intron | 25.0% |
| !!! | AGATCCGAATTTTAAAATAG+GGG | - | chr1.3:66213431-66213450 | MS.gene005970:intron | 25.0% |
| !!! | CCTTCATTTTTTTGATGATA+GGG | - | chr1.3:66213465-66213484 | MS.gene005970:intron | 25.0% |
| !!! | CTTCATTTTTTTGATGATAG+GGG | - | chr1.3:66213466-66213485 | MS.gene005970:intron | 25.0% |
| !!! | GAACCTTCAAAATATTTTGA+AGG | - | chr1.3:66212617-66212636 | MS.gene005970:CDS | 25.0% |
| !!! | GATTTTGGAATTGAAAGTAT+TGG | - | chr1.3:66211375-66211394 | MS.gene005970:intron | 25.0% |
| !!! | GTGCATAAATTTGTTGTAAA+TGG | - | chr1.3:66215841-66215860 | MS.gene005970:CDS | 25.0% |
| !!! | GTTTAAAAGGGTATTGATTT+TGG | - | chr1.3:66211360-66211379 | MS.gene005970:intron | 25.0% |
| !!! | TAAGATACTTTGGCTTTTTT+TGG | - | chr1.3:66215927-66215946 | MS.gene005970:CDS | 25.0% |
| !!! | TTCATTTTTTTGATGATAGG+GGG | - | chr1.3:66213467-66213486 | MS.gene005970:intron | 25.0% |
| AAAACATGAGCAATGATATG+AGG | + | chr1.3:66212595-66212614 | None:intergenic | 30.0% | |
| AAACCAGTGTTGTCAAATAT+TGG | + | chr1.3:66214441-66214460 | None:intergenic | 30.0% | |
| AACAACGTGCAATATGAAAA+TGG | + | chr1.3:66213809-66213828 | None:intergenic | 30.0% | |
| AATCCTTCACAAATTAGCTA+TGG | - | chr1.3:66214378-66214397 | MS.gene005970:CDS | 30.0% | |
| AATGACACAAAAATCAGATG+AGG | - | chr1.3:66213363-66213382 | MS.gene005970:CDS | 30.0% | |
| AATTCCTCCATAAAATGCAA+TGG | - | chr1.3:66214349-66214368 | MS.gene005970:CDS | 30.0% | |
| AATTTAGACCTGTAGCAATT+TGG | + | chr1.3:66212569-66212588 | None:intergenic | 30.0% | |
| AATTTGAGAGATATCGATGA+TGG | - | chr1.3:66211513-66211532 | MS.gene005970:CDS | 30.0% | |
| ACGACTTTGCTGAAATAAAA+TGG | - | chr1.3:66214182-66214201 | MS.gene005970:intron | 30.0% | |
| AGCGTGCATATTCTAATATT+TGG | + | chr1.3:66214889-66214908 | None:intergenic | 30.0% | |
| ATGACACAAAAATCAGATGA+GGG | - | chr1.3:66213364-66213383 | MS.gene005970:CDS | 30.0% | |
| CAAAACCATCAAGATCTTAA+AGG | - | chr1.3:66216700-66216719 | MS.gene005970:CDS | 30.0% | |
| CCCTATCATCAAAAAAATGA+AGG | + | chr1.3:66213468-66213487 | None:intergenic | 30.0% | |
| CTAGACTCTTATTATCATAC+AGG | - | chr1.3:66211845-66211864 | MS.gene005970:intron | 30.0% | |
| CTTATGATAAAATCTAAGGG+AGG | + | chr1.3:66215641-66215660 | None:intergenic | 30.0% | |
| GAAATAAAATGGTAACTTGG+TGG | - | chr1.3:66214193-66214212 | MS.gene005970:intron | 30.0% | |
| GAAGTATACAGAGAATTGTA+AGG | + | chr1.3:66215468-66215487 | None:intergenic | 30.0% | |
| GCATTTATTGTAGACTTATG+GGG | - | chr1.3:66216368-66216387 | MS.gene005970:intron | 30.0% | |
| GCTGAAATAAAATGGTAACT+TGG | - | chr1.3:66214190-66214209 | MS.gene005970:intron | 30.0% | |
| TAACACAAAATACTTGCAAG+TGG | + | chr1.3:66212784-66212803 | None:intergenic | 30.0% | |
| TAACCAATATTTGACAACAC+TGG | - | chr1.3:66214435-66214454 | MS.gene005970:CDS | 30.0% | |
| TAAGTTGTTGTGAACTCTAA+TGG | - | chr1.3:66213164-66213183 | MS.gene005970:CDS | 30.0% | |
| TATTAAGGGCTTGTATGAAT+TGG | + | chr1.3:66211306-66211325 | None:intergenic | 30.0% | |
| TCAATGAATAAGAATCTGCT+TGG | + | chr1.3:66213204-66213223 | None:intergenic | 30.0% | |
| TGAGACCAGAAATCTAATAA+AGG | - | chr1.3:66211580-66211599 | MS.gene005970:intron | 30.0% | |
| TGCTACAAATCTTGATATTG+CGG | - | chr1.3:66212219-66212238 | MS.gene005970:intron | 30.0% | |
| TTCAATCAGATAAGAGTTTC+TGG | - | chr1.3:66217137-66217156 | MS.gene005970:intron | 30.0% | |
| TTCATATAAAAAGCTTGGGA+AGG | + | chr1.3:66211953-66211972 | None:intergenic | 30.0% | |
| TTGAATCCATTTCTGTTGAA+AGG | + | chr1.3:66213957-66213976 | None:intergenic | 30.0% | |
| ! | AACTTCTGGTAGTCAATTTT+TGG | - | chr1.3:66215046-66215065 | MS.gene005970:intron | 30.0% |
| ! | AATATTTGACAACACTGGTT+TGG | - | chr1.3:66214440-66214459 | MS.gene005970:intron | 30.0% |
| ! | ATAAGGCTTAAATGCACTTT+TGG | + | chr1.3:66213494-66213513 | None:intergenic | 30.0% |
| ! | ATGAACATACTTGTTACTGT+AGG | - | chr1.3:66217292-66217311 | MS.gene005970:intron | 30.0% |
| ! | CATTTTACCTCAATGTTAAG+AGG | + | chr1.3:66217212-66217231 | None:intergenic | 30.0% |
| ! | CTGCATTCTAACATTTTTAC+AGG | + | chr1.3:66216042-66216061 | None:intergenic | 30.0% |
| ! | GCTTTTAATCTCTATCTTCA+AGG | - | chr1.3:66215660-66215679 | MS.gene005970:intron | 30.0% |
| ! | GTGTTGTCAAATATTGGTTA+TGG | + | chr1.3:66214435-66214454 | None:intergenic | 30.0% |
| ! | TCTAAGATATCTTTGATGTC+AGG | + | chr1.3:66214011-66214030 | None:intergenic | 30.0% |
| ! | TTCAAATTTTTCACCAATGC+TGG | - | chr1.3:66213972-66213991 | MS.gene005970:intron | 30.0% |
| ! | TTTTGGTGAATAATAGGCAA+AGG | - | chr1.3:66215001-66215020 | MS.gene005970:intron | 30.0% |
| !! | ATGACTCAGTTTGTTATTGT+AGG | - | chr1.3:66214529-66214548 | MS.gene005970:intron | 30.0% |
| !! | GACTTTCTAAAGCTTCAAAA+CGG | - | chr1.3:66212160-66212179 | MS.gene005970:intron | 30.0% |
| !! | TTTTATTTGCAGCAACATCA+GGG | - | chr1.3:66211610-66211629 | MS.gene005970:intron | 30.0% |
| !! | TTTTCGTTTGTTAATGTCCA+CGG | - | chr1.3:66213844-66213863 | MS.gene005970:intron | 30.0% |
| !! | TTTTTATTTGCAGCAACATC+AGG | - | chr1.3:66211609-66211628 | MS.gene005970:intron | 30.0% |
| !!! | AATGGTTTTGAAGAGAATTC+TGG | - | chr1.3:66212665-66212684 | MS.gene005970:intron | 30.0% |
| !!! | ATCCGAATTTTAAAATAGGG+GGG | - | chr1.3:66213433-66213452 | MS.gene005970:intron | 30.0% |
| !!! | ATGGTTTTAAATTGCAACTG+CGG | - | chr1.3:66212193-66212212 | MS.gene005970:intron | 30.0% |
| !!! | CTTTAAGATCTTGATGGTTT+TGG | + | chr1.3:66216702-66216721 | None:intergenic | 30.0% |
| !!! | GATCCGAATTTTAAAATAGG+GGG | - | chr1.3:66213432-66213451 | MS.gene005970:intron | 30.0% |
| !!! | GTTGCTTTTTGGTGAATAAT+AGG | - | chr1.3:66214995-66215014 | MS.gene005970:intron | 30.0% |
| !!! | GTTTTAACTGGTCTAATAGA+AGG | - | chr1.3:66216631-66216650 | MS.gene005970:CDS | 30.0% |
| !!! | TGATATTCACTGTTGCTTTT+TGG | - | chr1.3:66214984-66215003 | MS.gene005970:intron | 30.0% |
| !!! | TTGTGTCATTTTTGTCATTG+TGG | + | chr1.3:66213353-66213372 | None:intergenic | 30.0% |
| AACAAATGGATGCATGCTAA+CGG | + | chr1.3:66216752-66216771 | None:intergenic | 35.0% | |
| AACCATCAAGATCTTAAAGG+AGG | - | chr1.3:66216703-66216722 | MS.gene005970:CDS | 35.0% | |
| AAGTCAGTCATGTCAAGATA+TGG | + | chr1.3:66212145-66212164 | None:intergenic | 35.0% | |
| ACAGCTTAAACTTATAGCTG+AGG | + | chr1.3:66216479-66216498 | None:intergenic | 35.0% | |
| ACCATCAAGATCTTAAAGGA+GGG | - | chr1.3:66216704-66216723 | MS.gene005970:CDS | 35.0% | |
| AGAAACTGTGCTGAAACATT+TGG | - | chr1.3:66216835-66216854 | MS.gene005970:intron | 35.0% | |
| AGCAATGAAAGCTATAACCA+AGG | - | chr1.3:66215195-66215214 | MS.gene005970:intron | 35.0% | |
| ATAGAAGCTAAAGACGTCTT+TGG | + | chr1.3:66216143-66216162 | None:intergenic | 35.0% | |
| ATGGTCCACCATCAATAAAA+CGG | + | chr1.3:66214319-66214338 | None:intergenic | 35.0% | |
| ATTGCAGAGAATATTTCTCC+GGG | + | chr1.3:66211817-66211836 | None:intergenic | 35.0% | |
| CAGCATTTGAGAGTTTCTAT+TGG | - | chr1.3:66212523-66212542 | MS.gene005970:intron | 35.0% | |
| CAGCTTAAACTTATAGCTGA+GGG | + | chr1.3:66216478-66216497 | None:intergenic | 35.0% | |
| CATTGCAGAGAATATTTCTC+CGG | + | chr1.3:66211818-66211837 | None:intergenic | 35.0% | |
| CTCAAATTTACGGACATCTA+GGG | + | chr1.3:66211501-66211520 | None:intergenic | 35.0% | |
| CTGTATCTTTCAGATCTTTC+CGG | - | chr1.3:66216804-66216823 | MS.gene005970:intron | 35.0% | |
| GACCTCTTAAATTGCATTTG+TGG | - | chr1.3:66212282-66212301 | MS.gene005970:intron | 35.0% | |
| GAGCTCTTAAGGAGAATAAT+TGG | - | chr1.3:66216317-66216336 | MS.gene005970:intron | 35.0% | |
| GATATATTCTAGGCTAGCAT+AGG | - | chr1.3:66213237-66213256 | MS.gene005970:intron | 35.0% | |
| GATTGATGAAGCTATTCGTT+TGG | - | chr1.3:66215790-66215809 | MS.gene005970:intron | 35.0% | |
| GCATATGGTTTACAAATCTG+CGG | - | chr1.3:66214859-66214878 | MS.gene005970:intron | 35.0% | |
| GGTTTGGAGATACAAATACT+GGG | - | chr1.3:66214456-66214475 | MS.gene005970:intron | 35.0% | |
| GTCCACAAATGCAATTTAAG+AGG | + | chr1.3:66212287-66212306 | None:intergenic | 35.0% | |
| TAACAATGGCTTCTGTATAC+AGG | - | chr1.3:66215133-66215152 | MS.gene005970:intron | 35.0% | |
| TAAGGTTGAAAAACTACCAG+AGG | + | chr1.3:66215450-66215469 | None:intergenic | 35.0% | |
| TATAAAAAGCTTGGGAAGGA+AGG | + | chr1.3:66211949-66211968 | None:intergenic | 35.0% | |
| TATTGCTGACAGAACTCTAT+TGG | - | chr1.3:66216256-66216275 | MS.gene005970:CDS | 35.0% | |
| TCAGCCTTGAACAAATTTGT+CGG | - | chr1.3:66217392-66217411 | MS.gene005970:intron | 35.0% | |
| TCCATATAGTTGTTGATGCA+GGG | - | chr1.3:66214637-66214656 | MS.gene005970:intron | 35.0% | |
| TCTCAAATTTACGGACATCT+AGG | + | chr1.3:66211502-66211521 | None:intergenic | 35.0% | |
| TGAACTGTAATAGTGAGTTG+TGG | - | chr1.3:66213734-66213753 | MS.gene005970:CDS | 35.0% | |
| TGATAGAGAGGAAACAGATT+AGG | + | chr1.3:66215490-66215509 | None:intergenic | 35.0% | |
| TGGCATATTCATTTATGACG+TGG | + | chr1.3:66213333-66213352 | None:intergenic | 35.0% | |
| TGGCTAAGCTTAATTGTGAA+TGG | + | chr1.3:66213789-66213808 | None:intergenic | 35.0% | |
| TGTACTTCCTCTTAACATTG+AGG | - | chr1.3:66217202-66217221 | MS.gene005970:intron | 35.0% | |
| TGTATCTTTCAGATCTTTCC+GGG | - | chr1.3:66216805-66216824 | MS.gene005970:intron | 35.0% | |
| TTCATTATTTGCGTAAGGAC+TGG | - | chr1.3:66213136-66213155 | MS.gene005970:CDS | 35.0% | |
| TTCCATATAGTTGTTGATGC+AGG | - | chr1.3:66214636-66214655 | MS.gene005970:intron | 35.0% | |
| ! | AAATTTTTCACCAATGCTGG+TGG | - | chr1.3:66213975-66213994 | MS.gene005970:intron | 35.0% |
| ! | CATTTTTATGTCCTGTTGAC+GGG | - | chr1.3:66213620-66213639 | MS.gene005970:intron | 35.0% |
| ! | CTTGATAACAAAGCTGATCT+TGG | - | chr1.3:66215223-66215242 | MS.gene005970:intron | 35.0% |
| ! | GCATTTTTATGTCCTGTTGA+CGG | - | chr1.3:66213619-66213638 | MS.gene005970:intron | 35.0% |
| ! | GCTCTTTTATGCAAAGCATA+TGG | - | chr1.3:66214844-66214863 | MS.gene005970:intron | 35.0% |
| ! | GGATGTTTGTTTCTTCCATT+TGG | - | chr1.3:66212083-66212102 | MS.gene005970:CDS | 35.0% |
| ! | TCAATGTTAAGAGGAAGTAC+AGG | + | chr1.3:66217203-66217222 | None:intergenic | 35.0% |
| ! | TGATCCGACAAATTTGTTCA+AGG | + | chr1.3:66217399-66217418 | None:intergenic | 35.0% |
| ! | TGGTTTGGAGATACAAATAC+TGG | - | chr1.3:66214455-66214474 | MS.gene005970:intron | 35.0% |
| ! | TTTCGTTTGTTAATGTCCAC+GGG | - | chr1.3:66213845-66213864 | MS.gene005970:intron | 35.0% |
| ! | TTTTACAGCTTCTGATATGG+CGG | - | chr1.3:66214216-66214235 | MS.gene005970:intron | 35.0% |
| !! | ATTTGGAGCCGTTTTATTGA+TGG | - | chr1.3:66214308-66214327 | MS.gene005970:CDS | 35.0% |
| !! | CAAGATCAGCTTTGTTATCA+AGG | + | chr1.3:66215225-66215244 | None:intergenic | 35.0% |
| !! | CAATGTGTGGTAGTTCTAAT+TGG | + | chr1.3:66216546-66216565 | None:intergenic | 35.0% |
| !! | GAGAAATCGCATTCTGAAAT+TGG | + | chr1.3:66213033-66213052 | None:intergenic | 35.0% |
| !! | GAGAATAATTGGCTTGATGA+TGG | - | chr1.3:66216328-66216347 | MS.gene005970:intron | 35.0% |
| !! | TGGAATTGAAAGTATTGGGT+TGG | - | chr1.3:66211380-66211399 | MS.gene005970:intron | 35.0% |
| !! | TGGTTTTACAGCTTCTGATA+TGG | - | chr1.3:66214213-66214232 | MS.gene005970:intron | 35.0% |
| !!! | TCCGAATTTTAAAATAGGGG+GGG | - | chr1.3:66213434-66213453 | MS.gene005970:intron | 35.0% |
| !!! | TTTTATTGCTAGCTTTCCTC+TGG | - | chr1.3:66215431-66215450 | MS.gene005970:intron | 35.0% |
| AAATGCTAAGGAGACTTTCG+AGG | + | chr1.3:66214695-66214714 | None:intergenic | 40.0% | |
| AAGGCTCCTGTAAACTATGA+AGG | - | chr1.3:66216890-66216909 | MS.gene005970:intron | 40.0% | |
| AATAGTTGTTCCAGGATGCT+AGG | + | chr1.3:66215518-66215537 | None:intergenic | 40.0% | |
| AATGTTGAGTTCACCGACAT+AGG | - | chr1.3:66216775-66216794 | MS.gene005970:intron | 40.0% | |
| ACTATATGGAAACCCTCCAA+TGG | + | chr1.3:66214627-66214646 | None:intergenic | 40.0% | |
| ACTATCACATGTTCCAGAGT+TGG | - | chr1.3:66217000-66217019 | MS.gene005970:intron | 40.0% | |
| ACTTGGACTTCGAGTAACAA+TGG | - | chr1.3:66215119-66215138 | MS.gene005970:intron | 40.0% | |
| AGAATAGACAGTTGAGTCGA+AGG | - | chr1.3:66211673-66211692 | MS.gene005970:intron | 40.0% | |
| AGGCTCCTGTAAACTATGAA+GGG | - | chr1.3:66216891-66216910 | MS.gene005970:intron | 40.0% | |
| ATAGTTGTTGATGCAGGGAA+TGG | - | chr1.3:66214642-66214661 | MS.gene005970:intron | 40.0% | |
| ATATAGTGACATACGTGGTG+TGG | - | chr1.3:66212390-66212409 | MS.gene005970:intron | 40.0% | |
| ATCATAATAGACCCGTCAAC+AGG | + | chr1.3:66213634-66213653 | None:intergenic | 40.0% | |
| ATGGTTTACAAATCTGCGGT+AGG | - | chr1.3:66214863-66214882 | MS.gene005970:intron | 40.0% | |
| ATGTTGAGTTCACCGACATA+GGG | - | chr1.3:66216776-66216795 | MS.gene005970:intron | 40.0% | |
| CATACCCCTTCATAGTTTAC+AGG | + | chr1.3:66216899-66216918 | None:intergenic | 40.0% | |
| CATCTAGCAATTGAAACGAG+TGG | - | chr1.3:66216289-66216308 | MS.gene005970:intron | 40.0% | |
| CATCTGCCTTTCAACAGAAA+TGG | - | chr1.3:66213948-66213967 | MS.gene005970:intron | 40.0% | |
| CATGGAGTGATAGTCTAAGA+AGG | + | chr1.3:66217178-66217197 | None:intergenic | 40.0% | |
| CGGAGAAATATTCTCTGCAA+TGG | - | chr1.3:66211816-66211835 | MS.gene005970:intron | 40.0% | |
| CGGGAAGTAAAATCGTTCAA+GGG | + | chr1.3:66211798-66211817 | None:intergenic | 40.0% | |
| CTATGCACGCTAAGATACTT+TGG | - | chr1.3:66215917-66215936 | MS.gene005970:CDS | 40.0% | |
| CTTGATATTGCGGCAAAATG+AGG | - | chr1.3:66212229-66212248 | MS.gene005970:intron | 40.0% | |
| GAATAGACAGTTGAGTCGAA+GGG | - | chr1.3:66211674-66211693 | MS.gene005970:intron | 40.0% | |
| GACGGGTCTATTATGATAAC+AGG | - | chr1.3:66213637-66213656 | MS.gene005970:intron | 40.0% | |
| GACTCAACTGTCTATTCTGT+TGG | + | chr1.3:66211671-66211690 | None:intergenic | 40.0% | |
| GAGACTTTCGAGGAAACTTA+CGG | + | chr1.3:66214685-66214704 | None:intergenic | 40.0% | |
| GATCTTAAAGGAGGGTAAGT+TGG | - | chr1.3:66216712-66216731 | MS.gene005970:CDS | 40.0% | |
| GTTCAATAGCACACTCACAA+AGG | - | chr1.3:66213591-66213610 | MS.gene005970:intron | 40.0% | |
| TCAAAACGGCAGGTTAGTAA+TGG | - | chr1.3:66212174-66212193 | MS.gene005970:intron | 40.0% | |
| TCCCTGCATCAACAACTATA+TGG | + | chr1.3:66214641-66214660 | None:intergenic | 40.0% | |
| TCTGTGACAATAGTTGTTCC+AGG | + | chr1.3:66215526-66215545 | None:intergenic | 40.0% | |
| TCTTTGATACTGATGTGGAC+AGG | - | chr1.3:66215251-66215270 | MS.gene005970:intron | 40.0% | |
| TGTGGAGAATATCTCCAGTT+GGG | - | chr1.3:66213752-66213771 | MS.gene005970:CDS | 40.0% | |
| TTAGACCTGTAGCAATTTGG+CGG | + | chr1.3:66212566-66212585 | None:intergenic | 40.0% | |
| TTGGTTATGGCAGATTACAG+TGG | + | chr1.3:66214422-66214441 | None:intergenic | 40.0% | |
| TTGTGGAGAATATCTCCAGT+TGG | - | chr1.3:66213751-66213770 | MS.gene005970:CDS | 40.0% | |
| TTGTGGGAATAATTTCGGCT+AGG | - | chr1.3:66215090-66215109 | MS.gene005970:intron | 40.0% | |
| TTTACAGCTTCTGATATGGC+GGG | - | chr1.3:66214217-66214236 | MS.gene005970:intron | 40.0% | |
| TTTCAGAATGCGATTTCTCG+AGG | - | chr1.3:66213034-66213053 | MS.gene005970:CDS | 40.0% | |
| TTTCATTGCTGTCTTGTCCT+CGG | + | chr1.3:66215185-66215204 | None:intergenic | 40.0% | |
| TTTCTATTGGCCATGATTCC+CGG | - | chr1.3:66212536-66212555 | MS.gene005970:intron | 40.0% | |
| ! | AGTGTGCTATTGAACATAGC+TGG | + | chr1.3:66213586-66213605 | None:intergenic | 40.0% |
| ! | CCTTGAACGATTTTACTTCC+CGG | - | chr1.3:66211796-66211815 | MS.gene005970:CDS | 40.0% |
| ! | CTGCCATAGCTAATTTGTGA+AGG | + | chr1.3:66214384-66214403 | None:intergenic | 40.0% |
| ! | GACACCATTGCATTTTATGG+AGG | + | chr1.3:66214356-66214375 | None:intergenic | 40.0% |
| ! | GTTGTGAACTCTAATGGATG+CGG | - | chr1.3:66213170-66213189 | MS.gene005970:CDS | 40.0% |
| ! | GTTTTTCTTTGGGTGAGTGT+TGG | - | chr1.3:66214819-66214838 | MS.gene005970:intron | 40.0% |
| ! | TAAGAGGAAGTACAGGATCA+TGG | + | chr1.3:66217196-66217215 | None:intergenic | 40.0% |
| ! | TGAATAATAGGCAAAGGTGC+TGG | - | chr1.3:66215007-66215026 | MS.gene005970:intron | 40.0% |
| ! | TGCGACACCATTGCATTTTA+TGG | + | chr1.3:66214359-66214378 | None:intergenic | 40.0% |
| ! | TTTGTTATCAAGGACTGCCT+TGG | + | chr1.3:66215215-66215234 | None:intergenic | 40.0% |
| ! | TTTTGTAGCCTCTCTTGAAC+CGG | + | chr1.3:66215766-66215785 | None:intergenic | 40.0% |
| !! | ACCCTCCTTTAAGATCTTGA+TGG | + | chr1.3:66216708-66216727 | None:intergenic | 40.0% |
| !! | AGCTGTTTTCATAGCTACTG+TGG | - | chr1.3:66211160-66211179 | MS.gene005970:intron | 40.0% |
| !! | ATAAGAGTTTCTGGCTATGG+TGG | - | chr1.3:66217146-66217165 | MS.gene005970:intron | 40.0% |
| !! | CAGATAAGAGTTTCTGGCTA+TGG | - | chr1.3:66217143-66217162 | MS.gene005970:intron | 40.0% |
| !! | GAGGGTAAGTTGGTGTATAA+AGG | - | chr1.3:66216722-66216741 | MS.gene005970:CDS | 40.0% |
| !! | TAAGAGTTTCTGGCTATGGT+GGG | - | chr1.3:66217147-66217166 | MS.gene005970:intron | 40.0% |
| !! | TGATGATGGTGCATACCTAA+TGG | - | chr1.3:66216342-66216361 | MS.gene005970:intron | 40.0% |
| !! | TTCTAAAGCTTCAAAACGGC+AGG | - | chr1.3:66212164-66212183 | MS.gene005970:intron | 40.0% |
| !! | TTTATTGATGGTGGACCATG+TGG | - | chr1.3:66214320-66214339 | MS.gene005970:CDS | 40.0% |
| !!! | AGTCAATTTTTGGAGCCTGA+TGG | - | chr1.3:66215056-66215075 | MS.gene005970:intron | 40.0% |
| !!! | CCCCCCCCTATTTTAAAATT+CGG | + | chr1.3:66213438-66213457 | None:intergenic | 40.0% |
| !!! | CCGAATTTTAAAATAGGGGG+GGG | - | chr1.3:66213435-66213454 | MS.gene005970:intron | 40.0% |
| !!! | CGAATTTTAAAATAGGGGGG+GGG | - | chr1.3:66213436-66213455 | MS.gene005970:intron | 40.0% |
| !!! | GGAGGAAGCAATGTTTTAAC+TGG | - | chr1.3:66216619-66216638 | MS.gene005970:CDS | 40.0% |
| AAAAAGCTTGGGAAGGAAGG+TGG | + | chr1.3:66211946-66211965 | None:intergenic | 45.0% | |
| AAATTGCCATTCACTACCCG+TGG | + | chr1.3:66213864-66213883 | None:intergenic | 45.0% | |
| AACGAAGATGCTGTGAAGCT+TGG | - | chr1.3:66217323-66217342 | MS.gene005970:intron | 45.0% | |
| AACGATTCCGGTTGAACTCA+CGG | + | chr1.3:66215369-66215388 | None:intergenic | 45.0% | |
| AAGAGCAATAGCTGCCATCA+AGG | + | chr1.3:66215398-66215417 | None:intergenic | 45.0% | |
| AAGCGAGTTGCGCATATAAG+GGG | + | chr1.3:66211709-66211728 | None:intergenic | 45.0% | |
| AATGCCTTAGCAGCTTGTGT+TGG | - | chr1.3:66217228-66217247 | MS.gene005970:intron | 45.0% | |
| ACAGACAGTGTGACTTCTGA+TGG | - | chr1.3:66215541-66215560 | MS.gene005970:intron | 45.0% | |
| AGAACTACCACACATTGTGC+AGG | - | chr1.3:66216549-66216568 | MS.gene005970:intron | 45.0% | |
| AGAAGTTGTCCACTATGGGT+GGG | - | chr1.3:66213075-66213094 | MS.gene005970:intron | 45.0% | |
| AGCTGCAACAGAAGTCCAAA+TGG | + | chr1.3:66212101-66212120 | None:intergenic | 45.0% | |
| AGTTCCAACACAAGCTGCTA+AGG | + | chr1.3:66217235-66217254 | None:intergenic | 45.0% | |
| ATCTTGACCTGCACAATGTG+TGG | + | chr1.3:66216559-66216578 | None:intergenic | 45.0% | |
| ATTCTGTTGGCAGCATTGTG+AGG | + | chr1.3:66211658-66211677 | None:intergenic | 45.0% | |
| CCGGGAAGTAAAATCGTTCA+AGG | + | chr1.3:66211799-66211818 | None:intergenic | 45.0% | |
| CTCTGATCCAAACCTGCAAA+AGG | - | chr1.3:66216871-66216890 | MS.gene005970:intron | 45.0% | |
| CTGACAGAACTCTATTGGTG+AGG | - | chr1.3:66216261-66216280 | MS.gene005970:CDS | 45.0% | |
| GAACCTGTTGCTGAAGCAAT+AGG | - | chr1.3:66212451-66212470 | MS.gene005970:intron | 45.0% | |
| GAAGCGAGTTGCGCATATAA+GGG | + | chr1.3:66211710-66211729 | None:intergenic | 45.0% | |
| GAATAAGAATCTGCTTGGCC+AGG | + | chr1.3:66213199-66213218 | None:intergenic | 45.0% | |
| GAATCGTTTGATCGCCTTGA+TGG | - | chr1.3:66215381-66215400 | MS.gene005970:intron | 45.0% | |
| GAGGACGAGAGATAGACTAA+CGG | + | chr1.3:66215622-66215641 | None:intergenic | 45.0% | |
| GATACAGCATGTCCCTATGT+CGG | + | chr1.3:66216791-66216810 | None:intergenic | 45.0% | |
| GATACTGATGTGGACAGGTA+AGG | - | chr1.3:66215256-66215275 | MS.gene005970:intron | 45.0% | |
| GATATCCGCCAAATTGCTAC+AGG | - | chr1.3:66212558-66212577 | MS.gene005970:intron | 45.0% | |
| GCAAAATGAGGCTGCATTTG+TGG | - | chr1.3:66212241-66212260 | MS.gene005970:intron | 45.0% | |
| GCAATTGAAACGAGTGGACA+TGG | - | chr1.3:66216295-66216314 | MS.gene005970:intron | 45.0% | |
| GCCTAGAAGTTGTCCACTAT+GGG | - | chr1.3:66213071-66213090 | MS.gene005970:intron | 45.0% | |
| GGAGGAATTGTCTTTCCACA+TGG | + | chr1.3:66214338-66214357 | None:intergenic | 45.0% | |
| GGCTCCTGTAAACTATGAAG+GGG | - | chr1.3:66216892-66216911 | MS.gene005970:intron | 45.0% | |
| GTGCATAAGCATACGTATGC+AGG | + | chr1.3:66211264-66211283 | None:intergenic | 45.0% | |
| GTTATGGCAGATTACAGTGG+CGG | + | chr1.3:66214419-66214438 | None:intergenic | 45.0% | |
| TAAATGTCACCCACCCATAG+TGG | + | chr1.3:66213087-66213106 | None:intergenic | 45.0% | |
| TAATGTCCACGGGTAGTGAA+TGG | - | chr1.3:66213855-66213874 | MS.gene005970:intron | 45.0% | |
| TAGAAGTTGTCCACTATGGG+TGG | - | chr1.3:66213074-66213093 | MS.gene005970:intron | 45.0% | |
| TAGCTACTGTGGAGAGCTTA+TGG | - | chr1.3:66211171-66211190 | MS.gene005970:intron | 45.0% | |
| TATCATTCTGCCTAGCATCC+TGG | - | chr1.3:66215505-66215524 | MS.gene005970:intron | 45.0% | |
| TCAAGGCGATCAAACGATTC+CGG | + | chr1.3:66215381-66215400 | None:intergenic | 45.0% | |
| TCAGATGAGGGACCAAATTC+AGG | - | chr1.3:66213376-66213395 | MS.gene005970:intron | 45.0% | |
| TGACAATGTGCGCAATTGCA+TGG | + | chr1.3:66211772-66211791 | None:intergenic | 45.0% | |
| TGCTAGGCAGAATGATAGAG+AGG | + | chr1.3:66215502-66215521 | None:intergenic | 45.0% | |
| TGGTCTAATAGAAGGACTCC+AGG | - | chr1.3:66216639-66216658 | MS.gene005970:CDS | 45.0% | |
| TGGTTGTGTATGATCCCAAC+TGG | + | chr1.3:66213769-66213788 | None:intergenic | 45.0% | |
| TGTTGTGCTTGCAGCTGTAA+AGG | - | chr1.3:66217349-66217368 | MS.gene005970:intron | 45.0% | |
| TTCAGATCTTTCCGGGAGTA+TGG | - | chr1.3:66216812-66216831 | MS.gene005970:intron | 45.0% | |
| TTCATTGCTGTCTTGTCCTC+GGG | + | chr1.3:66215184-66215203 | None:intergenic | 45.0% | |
| ! | AGTTTACAGGAGCCTTTTGC+AGG | + | chr1.3:66216886-66216905 | None:intergenic | 45.0% |
| ! | GTAGCAATTTGGCGGATATC+CGG | + | chr1.3:66212558-66212577 | None:intergenic | 45.0% |
| ! | GTGTATGCTACTTCCAACTC+TGG | + | chr1.3:66217016-66217035 | None:intergenic | 45.0% |
| ! | TAGCAATTTGGCGGATATCC+GGG | + | chr1.3:66212557-66212576 | None:intergenic | 45.0% |
| !! | AAACATCACCGGTTCAAGAG+AGG | - | chr1.3:66215755-66215774 | MS.gene005970:intron | 45.0% |
| !! | ACCCATAGTGGACAACTTCT+AGG | + | chr1.3:66213075-66213094 | None:intergenic | 45.0% |
| !! | ATAGTGGACAACTTCTAGGC+CGG | + | chr1.3:66213071-66213090 | None:intergenic | 45.0% |
| !! | ATGACTTGCTGTTCACAGAC+AGG | + | chr1.3:66213931-66213950 | None:intergenic | 45.0% |
| !! | TGACTTGCTGTTCACAGACA+GGG | + | chr1.3:66213930-66213949 | None:intergenic | 45.0% |
| !! | TGGAGCCGTTTTATTGATGG+TGG | - | chr1.3:66214311-66214330 | MS.gene005970:CDS | 45.0% |
| !! | AAAAAATAAAAAAGTAAAAT+AGG | - | chr1.3:66213400-66213419 | MS.gene005970:intron | 5.0% |
| !! | AAAAATAAAAAAGTAAAATA+GGG | - | chr1.3:66213401-66213420 | MS.gene005970:intron | 5.0% |
| !! | AAAATAAAATTCAAATATTA+AGG | + | chr1.3:66211321-66211340 | None:intergenic | 5.0% |
| !! | AAATAAAATTCAAATATTAA+GGG | + | chr1.3:66211320-66211339 | None:intergenic | 5.0% |
| !! | ATATACTAAATATTTAAATA+TGG | - | chr1.3:66216227-66216246 | MS.gene005970:CDS | 5.0% |
| !! | TAATGATTAATAATTTATAA+TGG | + | chr1.3:66217098-66217117 | None:intergenic | 5.0% |
| !! | TATTAAACAATTAAAATATT+TGG | - | chr1.3:66214291-66214310 | MS.gene005970:CDS | 5.0% |
| !!! | ATTTTTTTCTATATAAAAAA+AGG | + | chr1.3:66214763-66214782 | None:intergenic | 5.0% |
| AAACCATATCCCCAATCCCG+AGG | - | chr1.3:66215165-66215184 | MS.gene005970:intron | 50.0% | |
| AAAGCAGTTCGCAAAGCAGC+TGG | - | chr1.3:66214149-66214168 | MS.gene005970:intron | 50.0% | |
| AAGGGTCAAACCCAATCTGG+TGG | - | chr1.3:66214247-66214266 | MS.gene005970:CDS | 50.0% | |
| ACCCTCCAATGGTTTCTCTG+TGG | + | chr1.3:66214616-66214635 | None:intergenic | 50.0% | |
| AGGGTCAAACCCAATCTGGT+GGG | - | chr1.3:66214248-66214267 | MS.gene005970:CDS | 50.0% | |
| ATACGTGGTGTGGCTCTTGA+TGG | - | chr1.3:66212400-66212419 | MS.gene005970:intron | 50.0% | |
| CAAATGGGTCCCACCAGATT+GGG | + | chr1.3:66214260-66214279 | None:intergenic | 50.0% | |
| CCAGAAGTTATTGCCCCAAG+AGG | + | chr1.3:66215035-66215054 | None:intergenic | 50.0% | |
| CCCACAGAGAAACCATTGGA+GGG | - | chr1.3:66214612-66214631 | MS.gene005970:intron | 50.0% | |
| CCCTCCAATGGTTTCTCTGT+GGG | + | chr1.3:66214615-66214634 | None:intergenic | 50.0% | |
| CCTCTTGGGGCAATAACTTC+TGG | - | chr1.3:66215032-66215051 | MS.gene005970:intron | 50.0% | |
| CGAAAGGGTCAAACCCAATC+TGG | - | chr1.3:66214244-66214263 | MS.gene005970:CDS | 50.0% | |
| CGCAAAGCAGCTGGAAACAT+AGG | - | chr1.3:66214158-66214177 | MS.gene005970:intron | 50.0% | |
| CTCAGTTCTGCAGCAAAAGC+TGG | + | chr1.3:66216667-66216686 | None:intergenic | 50.0% | |
| CTCCTTCAGGGAAGTTGACA+TGG | - | chr1.3:66211733-66211752 | MS.gene005970:CDS | 50.0% | |
| CTTCAGCAACAGGTTCAGTG+AGG | + | chr1.3:66212447-66212466 | None:intergenic | 50.0% | |
| CTTGCTTCTGCAAGAGCTTC+TGG | - | chr1.3:66216589-66216608 | MS.gene005970:CDS | 50.0% | |
| GAGTGGACATGGAGCTCTTA+AGG | - | chr1.3:66216306-66216325 | MS.gene005970:intron | 50.0% | |
| GATTGGGTTTGACCCTTTCG+TGG | + | chr1.3:66214244-66214263 | None:intergenic | 50.0% | |
| GCACAGTTTCTCCATACTCC+CGG | + | chr1.3:66216826-66216845 | None:intergenic | 50.0% | |
| GCAGCTGTAAAGGAGTTTGC+AGG | - | chr1.3:66217359-66217378 | MS.gene005970:intron | 50.0% | |
| GCTCCTATTGCTTCAGCAAC+AGG | + | chr1.3:66212457-66212476 | None:intergenic | 50.0% | |
| GGAAGCGAGTTGCGCATATA+AGG | + | chr1.3:66211711-66211730 | None:intergenic | 50.0% | |
| GGCCTAGAAGTTGTCCACTA+TGG | - | chr1.3:66213070-66213089 | MS.gene005970:intron | 50.0% | |
| GTCAACTTCCCTGAAGGAGA+GGG | + | chr1.3:66211732-66211751 | None:intergenic | 50.0% | |
| GTCCATGTCAACTTCCCTGA+AGG | + | chr1.3:66211738-66211757 | None:intergenic | 50.0% | |
| TCACCAATGCTGGTGGTCTT+GGG | - | chr1.3:66213982-66214001 | MS.gene005970:intron | 50.0% | |
| TCAGGGAAGTTGACATGGAC+TGG | - | chr1.3:66211738-66211757 | MS.gene005970:CDS | 50.0% | |
| TCGGGATTGGGGATATGGTT+TGG | + | chr1.3:66215166-66215185 | None:intergenic | 50.0% | |
| TCTCAGGTGGCAAACATCAC+CGG | - | chr1.3:66215744-66215763 | MS.gene005970:intron | 50.0% | |
| TCTGCAAGAGCTTCTGGTGT+AGG | - | chr1.3:66216595-66216614 | MS.gene005970:CDS | 50.0% | |
| TCTGCCCACAGAGAAACCAT+TGG | - | chr1.3:66214608-66214627 | MS.gene005970:intron | 50.0% | |
| TGTCAACTTCCCTGAAGGAG+AGG | + | chr1.3:66211733-66211752 | None:intergenic | 50.0% | |
| TTCACCAATGCTGGTGGTCT+TGG | - | chr1.3:66213981-66214000 | MS.gene005970:intron | 50.0% | |
| TTCTTCTAGATCCGCTGCTG+TGG | - | chr1.3:66215333-66215352 | MS.gene005970:CDS | 50.0% | |
| ! | ACAGGAGCCTTTTGCAGGTT+TGG | + | chr1.3:66216881-66216900 | None:intergenic | 50.0% |
| ! | TTTCGGCTAGGCATTGCACT+TGG | - | chr1.3:66215102-66215121 | MS.gene005970:intron | 50.0% |
| !! | AAAGGTGCTGGAACCTCTTG+GGG | - | chr1.3:66215019-66215038 | MS.gene005970:intron | 50.0% |
| !! | CAAAGGTGCTGGAACCTCTT+GGG | - | chr1.3:66215018-66215037 | MS.gene005970:intron | 50.0% |
| AACTCGCTTCCCTCTCCTTC+AGG | - | chr1.3:66211720-66211739 | MS.gene005970:CDS | 55.0% | |
| ACTCGCTTCCCTCTCCTTCA+GGG | - | chr1.3:66211721-66211740 | MS.gene005970:CDS | 55.0% | |
| AGAGCTTCTGGTGTAGGTGG+AGG | - | chr1.3:66216601-66216620 | MS.gene005970:CDS | 55.0% | |
| CTGTCTTGTCCTCGGGATTG+GGG | + | chr1.3:66215177-66215196 | None:intergenic | 55.0% | |
| CTTCCCAAGACCACCAGCAT+TGG | + | chr1.3:66213988-66214007 | None:intergenic | 55.0% | |
| GCAAATGGGTCCCACCAGAT+TGG | + | chr1.3:66214261-66214280 | None:intergenic | 55.0% | |
| GCAAGAGCTTCTGGTGTAGG+TGG | - | chr1.3:66216598-66216617 | MS.gene005970:CDS | 55.0% | |
| GCCAGTGAAATCCACAGCAG+CGG | + | chr1.3:66215347-66215366 | None:intergenic | 55.0% | |
| GCCCACAGAGAAACCATTGG+AGG | - | chr1.3:66214611-66214630 | MS.gene005970:intron | 55.0% | |
| GCGATTTCTCGAGGTCTTGC+TGG | - | chr1.3:66213043-66213062 | MS.gene005970:intron | 55.0% | |
| GCTGTCTTGTCCTCGGGATT+GGG | + | chr1.3:66215178-66215197 | None:intergenic | 55.0% | |
| GTTGATGCAGGGAATGGAGC+AGG | - | chr1.3:66214648-66214667 | MS.gene005970:intron | 55.0% | |
| TCACTGGCCGTGAGTTCAAC+CGG | - | chr1.3:66215359-66215378 | MS.gene005970:intron | 55.0% | |
| TCCGCTGCTGTGGATTTCAC+TGG | - | chr1.3:66215343-66215362 | MS.gene005970:intron | 55.0% | |
| TGCTGTCTTGTCCTCGGGAT+TGG | + | chr1.3:66215179-66215198 | None:intergenic | 55.0% | |
| TGCTTTCGCTGGATGGTTGG+TGG | - | chr1.3:66212477-66212496 | MS.gene005970:intron | 55.0% | |
| TGTCCTCGGGATTGGGGATA+TGG | + | chr1.3:66215171-66215190 | None:intergenic | 55.0% | |
| ! | AGCTGCTTTCGCTGGATGGT+TGG | - | chr1.3:66212474-66212493 | MS.gene005970:intron | 55.0% |
| ! | CTCTAATGGATGCGGTTGCC+TGG | - | chr1.3:66213178-66213197 | MS.gene005970:CDS | 55.0% |
| ! | CTGCAGCAAAAGCTGGTTCC+TGG | + | chr1.3:66216660-66216679 | None:intergenic | 55.0% |
| ! | GCAATAGGAGCTGCTTTCGC+TGG | - | chr1.3:66212466-66212485 | MS.gene005970:intron | 55.0% |
| ! | TAGGAGCTGCTTTCGCTGGA+TGG | - | chr1.3:66212470-66212489 | MS.gene005970:intron | 55.0% |
| ! | TGGCGGATATCCGGGAATCA+TGG | + | chr1.3:66212549-66212568 | None:intergenic | 55.0% |
| !! | CTTGATGGTGTCGAGGGAGA+GGG | - | chr1.3:66212415-66212434 | MS.gene005970:intron | 55.0% |
| !! | GAGTTTCTGGCTATGGTGGG+TGG | - | chr1.3:66217150-66217169 | MS.gene005970:intron | 55.0% |
| !! | GATATGGCGGGTCCACGAAA+GGG | - | chr1.3:66214229-66214248 | MS.gene005970:CDS | 55.0% |
| !! | GCAAAGGTGCTGGAACCTCT+TGG | - | chr1.3:66215017-66215036 | MS.gene005970:intron | 55.0% |
| !! | GTGGCTCTTGATGGTGTCGA+GGG | - | chr1.3:66212409-66212428 | MS.gene005970:intron | 55.0% |
| !! | TCTTGATGGTGTCGAGGGAG+AGG | - | chr1.3:66212414-66212433 | MS.gene005970:intron | 55.0% |
| !! | TGATATGGCGGGTCCACGAA+AGG | - | chr1.3:66214228-66214247 | MS.gene005970:CDS | 55.0% |
| !! | TGTGGCTCTTGATGGTGTCG+AGG | - | chr1.3:66212408-66212427 | MS.gene005970:intron | 55.0% |
| !! | TTGATGGTGTCGAGGGAGAG+GGG | - | chr1.3:66212416-66212435 | MS.gene005970:intron | 55.0% |
| GATGCAGGGAATGGAGCAGG+TGG | - | chr1.3:66214651-66214670 | MS.gene005970:intron | 60.0% | |
| TCTCGAGGTCTTGCTGGTGC+CGG | - | chr1.3:66213049-66213068 | MS.gene005970:intron | 60.0% | |
| ! | TGATGGTGTCGAGGGAGAGG+GGG | - | chr1.3:66212417-66212436 | MS.gene005970:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 66210980 | 66217421 | 66210980 | ID=MS.gene005970 |
| chr1.3 | mRNA | 66210980 | 66217421 | 66210980 | ID=MS.gene005970.t1;Parent=MS.gene005970 |
| chr1.3 | exon | 66217415 | 66217421 | 66217415 | ID=MS.gene005970.t1.exon1;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66217415 | 66217421 | 66217415 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66216564 | 66216779 | 66216564 | ID=MS.gene005970.t1.exon2;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66216564 | 66216779 | 66216564 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66216216 | 66216282 | 66216216 | ID=MS.gene005970.t1.exon3;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66216216 | 66216282 | 66216216 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66215822 | 66216005 | 66215822 | ID=MS.gene005970.t1.exon4;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66215822 | 66216005 | 66215822 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66215309 | 66215361 | 66215309 | ID=MS.gene005970.t1.exon5;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66215309 | 66215361 | 66215309 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66214743 | 66214831 | 66214743 | ID=MS.gene005970.t1.exon6;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66214743 | 66214831 | 66214743 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66214222 | 66214458 | 66214222 | ID=MS.gene005970.t1.exon7;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66214222 | 66214458 | 66214222 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66213718 | 66213782 | 66213718 | ID=MS.gene005970.t1.exon8;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66213718 | 66213782 | 66213718 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66213324 | 66213384 | 66213324 | ID=MS.gene005970.t1.exon9;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66213324 | 66213384 | 66213324 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66213129 | 66213246 | 66213129 | ID=MS.gene005970.t1.exon10;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66213129 | 66213246 | 66213129 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66212978 | 66213059 | 66212978 | ID=MS.gene005970.t1.exon11;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66212978 | 66213059 | 66212978 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66212809 | 66212881 | 66212809 | ID=MS.gene005970.t1.exon12;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66212809 | 66212881 | 66212809 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66212590 | 66212651 | 66212590 | ID=MS.gene005970.t1.exon13;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66212590 | 66212651 | 66212590 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66212038 | 66212133 | 66212038 | ID=MS.gene005970.t1.exon14;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66212038 | 66212133 | 66212038 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66211676 | 66211830 | 66211676 | ID=MS.gene005970.t1.exon15;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66211676 | 66211830 | 66211676 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66211488 | 66211584 | 66211488 | ID=MS.gene005970.t1.exon16;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66211488 | 66211584 | 66211488 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66211178 | 66211255 | 66211178 | ID=MS.gene005970.t1.exon17;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66211178 | 66211255 | 66211178 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| chr1.3 | exon | 66210980 | 66211087 | 66210980 | ID=MS.gene005970.t1.exon18;Parent=MS.gene005970.t1 |
| chr1.3 | CDS | 66210980 | 66211087 | 66210980 | ID=cds.MS.gene005970.t1;Parent=MS.gene005970.t1 |
| Gene Sequence |
| Protein sequence |
