Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34039.t1 | XP_003591897.1 | 98.6 | 582 | 8 | 0 | 1 | 582 | 34 | 615 | 0.00E+00 | 1129.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34039.t1 | Q88C93 | 28.6 | 496 | 282 | 16 | 65 | 557 | 18 | 444 | 1.1e-35 | 152.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34039.t1 | G7I385 | 98.6 | 582 | 8 | 0 | 1 | 582 | 34 | 615 | 0.0e+00 | 1129.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049382 | MS.gene34039 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene34039 | 0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene052256 | MS.gene34039 | 0.808807 | 2.58E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene34039 | -0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene34039 | 0.806557 | 7.76E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene34039 | 0.81137 | 7.24E-51 | -1.69E-46 |
| MS.gene060619 | MS.gene34039 | 0.810372 | 1.19E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34039 | MS.gene071517 | PPI |
| MS.gene34039 | MS.gene56072 | PPI |
| MS.gene34039 | MS.gene006930 | PPI |
| MS.gene34039 | MS.gene56403 | PPI |
| MS.gene56074 | MS.gene34039 | PPI |
| MS.gene34039 | MS.gene071518 | PPI |
| MS.gene34039 | MS.gene56402 | PPI |
| MS.gene34039 | MS.gene071519 | PPI |
| MS.gene34039 | MS.gene059512 | PPI |
| MS.gene34039 | MS.gene071520 | PPI |
| MS.gene56071 | MS.gene34039 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34039.t1 | MTR_1g094980 | 98.625 | 582 | 8 | 0 | 1 | 582 | 34 | 615 | 0.0 | 1164 |
| MS.gene34039.t1 | MTR_1g094980 | 99.261 | 541 | 4 | 0 | 42 | 582 | 3 | 543 | 0.0 | 1085 |
| MS.gene34039.t1 | MTR_4g084270 | 41.256 | 589 | 298 | 14 | 26 | 580 | 41 | 615 | 7.38e-132 | 399 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34039.t1 | AT5G17530 | 76.289 | 582 | 136 | 2 | 1 | 582 | 34 | 613 | 0.0 | 899 |
| MS.gene34039.t1 | AT5G17530 | 76.289 | 582 | 136 | 2 | 1 | 582 | 1 | 580 | 0.0 | 899 |
| MS.gene34039.t1 | AT5G17530 | 76.289 | 582 | 136 | 2 | 1 | 582 | 1 | 580 | 0.0 | 899 |
| MS.gene34039.t1 | AT5G17530 | 76.289 | 582 | 136 | 2 | 1 | 582 | 1 | 580 | 0.0 | 899 |
| MS.gene34039.t1 | AT5G17530 | 76.289 | 582 | 136 | 2 | 1 | 582 | 1 | 580 | 0.0 | 899 |
| MS.gene34039.t1 | AT5G17530 | 73.267 | 606 | 136 | 3 | 1 | 582 | 34 | 637 | 0.0 | 885 |
| MS.gene34039.t1 | AT5G17530 | 79.298 | 541 | 110 | 2 | 42 | 582 | 3 | 541 | 0.0 | 872 |
| MS.gene34039.t1 | AT1G70820 | 43.726 | 526 | 250 | 11 | 53 | 548 | 66 | 575 | 2.48e-133 | 402 |
| MS.gene34039.t1 | AT1G70820 | 41.637 | 562 | 280 | 11 | 53 | 581 | 66 | 612 | 3.07e-133 | 402 |
Find 156 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCAGATCAGAGTTTC+TGG | 0.171913 | 1.4:-73954617 | MS.gene34039:intron |
| TGTCCTCGGGATTGGGGATA+TGG | 0.229075 | 1.4:+73957312 | None:intergenic |
| CTTTAAGATCTGGATGGTTT+TGG | 0.233736 | 1.4:+73955367 | None:intergenic |
| GCTGTCTTGTCCTCGGGATT+GGG | 0.263026 | 1.4:+73957305 | None:intergenic |
| TGCTGTCTTGTCCTCGGGAT+TGG | 0.272046 | 1.4:+73957304 | None:intergenic |
| CTTGCTTCCGCTAGAGCTTC+TGG | 0.284615 | 1.4:-73955477 | MS.gene34039:CDS |
| TTCACCAATGCTGGTGGTCT+TGG | 0.294398 | 1.4:-73958499 | MS.gene34039:CDS |
| AATTTAGACCTGTAGCAATT+TGG | 0.299537 | 1.4:+73959905 | None:intergenic |
| AACTCGCTTCCCTCTCCTTC+AGG | 0.309258 | 1.4:-73960771 | MS.gene34039:CDS |
| CAAAACCATCCAGATCTTAA+AGG | 0.316228 | 1.4:-73955366 | MS.gene34039:CDS |
| GAATCGTTTGATTGCCTTGA+TGG | 0.332795 | 1.4:-73957096 | MS.gene34039:CDS |
| CAGATCAGAGTTTCTGGTTA+TGG | 0.333588 | 1.4:-73954611 | MS.gene34039:CDS |
| GCGATTTCTCGAGGTCTTGC+TGG | 0.334136 | 1.4:-73959442 | MS.gene34039:CDS |
| TCCCTGCATCAACAACTATA+TGG | 0.338345 | 1.4:+73957842 | None:intergenic |
| CAAGATCAGCTTTGTTATCA+AGG | 0.346861 | 1.4:+73957258 | None:intergenic |
| AACGATTCCGGTTGAATTCA+CGG | 0.354655 | 1.4:+73957111 | None:intergenic |
| CAGTGGGCATGGAGCTCTTA+AGG | 0.356191 | 1.4:-73955931 | MS.gene34039:CDS |
| GTAGCAATTTGGCGGATATC+CGG | 0.369612 | 1.4:+73959916 | None:intergenic |
| CATCTGCCTTTCAACAGAAA+TGG | 0.370069 | 1.4:-73958532 | MS.gene34039:CDS |
| TTTCTATTGGCCATGATTCC+CGG | 0.370362 | 1.4:-73959935 | MS.gene34039:CDS |
| GCAGCTGTAAAGGAGTTTGC+AGG | 0.375282 | 1.4:-73954395 | MS.gene34039:CDS |
| CTTGATAACAAAGCTGATCT+TGG | 0.375462 | 1.4:-73957257 | MS.gene34039:CDS |
| GCTCCTATTGCTTCAGCAAC+GGG | 0.376006 | 1.4:+73960017 | None:intergenic |
| TATTGCTGACAGAACTCTAA+TGG | 0.379223 | 1.4:-73955981 | MS.gene34039:intron |
| TCACCAATGCTGGTGGTCTT+GGG | 0.385644 | 1.4:-73958498 | MS.gene34039:CDS |
| ACCCATAGTGGACAACTTCT+AGG | 0.386131 | 1.4:+73959413 | None:intergenic |
| GGCCTAGAAGTTGTCCACTA+TGG | 0.388207 | 1.4:-73959415 | MS.gene34039:CDS |
| CAAAGGTGCTGGAACCTCTT+GGG | 0.392597 | 1.4:-73957462 | MS.gene34039:CDS |
| ATTGCTGACAGAACTCTAAT+GGG | 0.393588 | 1.4:-73955980 | MS.gene34039:intron |
| TTTCATTGCTGTCTTGTCCT+CGG | 0.401263 | 1.4:+73957298 | None:intergenic |
| TTCCATATAGTTGTTGATGC+AGG | 0.410833 | 1.4:-73957844 | MS.gene34039:CDS |
| TTCATTGCTGTCTTGTCCTC+GGG | 0.416993 | 1.4:+73957299 | None:intergenic |
| TCGGGATTGGGGATATGGTT+TGG | 0.417838 | 1.4:+73957317 | None:intergenic |
| CAGCATTTGAGAGTTTCTAT+TGG | 0.418225 | 1.4:-73959948 | MS.gene34039:CDS |
| CCTCTTGGGGCAATAACTTC+TGG | 0.422876 | 1.4:-73957448 | MS.gene34039:CDS |
| TCTTGATGGTGTCGAGGGAG+AGG | 0.430042 | 1.4:-73960057 | MS.gene34039:CDS |
| TCAAGGCAATCAAACGATTC+CGG | 0.432512 | 1.4:+73957099 | None:intergenic |
| GACGGGTCTATTATGATAAC+AGG | 0.433152 | 1.4:-73958843 | MS.gene34039:intron |
| TATCATTCTGCCTAGCATCC+TGG | 0.436883 | 1.4:-73956973 | MS.gene34039:intron |
| TGATCCGACAAATTTGTTCA+AGG | 0.437587 | 1.4:+73954358 | None:intergenic |
| CTCAGTTCTGCAGCAAAAGC+TGG | 0.439351 | 1.4:+73955402 | None:intergenic |
| CCGGGAAGTAAAATCGTTCA+AGG | 0.440436 | 1.4:+73960695 | None:intergenic |
| TCTAAGATATCTTTGATGTC+AGG | 0.441688 | 1.4:+73958472 | None:intergenic |
| AAGTCAGTCATGTCAAGATA+TGG | 0.443959 | 1.4:+73960349 | None:intergenic |
| CTTGATGGTGTCGAGGGAGA+GGG | 0.444076 | 1.4:-73960056 | MS.gene34039:CDS |
| GAGCTCTTAAGGAAAACAAT+TGG | 0.444681 | 1.4:-73955920 | MS.gene34039:CDS |
| CTGCAGCAAAAGCTGGCTCC+TGG | 0.447472 | 1.4:+73955409 | None:intergenic |
| GCAATAGGAGCTGCTTTCGC+TGG | 0.450521 | 1.4:-73960005 | MS.gene34039:CDS |
| GCAAAGGTGCTGGAACCTCT+TGG | 0.455133 | 1.4:-73957463 | MS.gene34039:CDS |
| GAACCCGTTGCTGAAGCAAT+AGG | 0.457244 | 1.4:-73960020 | MS.gene34039:CDS |
| GCTTACCCTCCTTTAAGATC+TGG | 0.459425 | 1.4:+73955357 | None:intergenic |
| GCCTAGAAGTTGTCCACTAT+GGG | 0.459618 | 1.4:-73959414 | MS.gene34039:intron |
| ATACGTGGTGTGGCTCTTGA+TGG | 0.460624 | 1.4:-73960071 | MS.gene34039:CDS |
| AACGAAGATGCTGTAAAGCT+TGG | 0.462671 | 1.4:-73954431 | MS.gene34039:CDS |
| CATTGCAGAGAATATTTCTC+CGG | 0.466369 | 1.4:+73960676 | None:intergenic |
| AGAAACTGTGCTGAAACATT+TGG | 0.467221 | 1.4:-73955234 | MS.gene34039:CDS |
| TTCTAAAGCTTCAAAACGGC+AGG | 0.471232 | 1.4:-73960327 | MS.gene34039:intron |
| ATCATAATAGACCCGTCAAC+AGG | 0.471820 | 1.4:+73958849 | None:intergenic |
| TTGAATCCATTTCTGTTGAA+AGG | 0.472893 | 1.4:+73958526 | None:intergenic |
| TGTTGTGCTTGCAGCTGTAA+AGG | 0.473841 | 1.4:-73954405 | MS.gene34039:CDS |
| TAATGGGGAGGAGTCTCATC+TGG | 0.475278 | 1.4:-73955964 | MS.gene34039:CDS |
| AAAGCAGTTCGCAAAGCAGC+TGG | 0.477285 | 1.4:-73958331 | MS.gene34039:CDS |
| ACTCGCTTCCCTCTCCTTCA+GGG | 0.477507 | 1.4:-73960770 | MS.gene34039:CDS |
| TGCTTTCGCTGGATGGTTGG+TGG | 0.478863 | 1.4:-73959994 | MS.gene34039:CDS |
| TAGCAATTTGGCGGATATCC+GGG | 0.479076 | 1.4:+73959917 | None:intergenic |
| CTCCTTCAGGGAAGTTGACA+TGG | 0.480523 | 1.4:-73960758 | MS.gene34039:CDS |
| TCTCGAGGTCTTGCTGGTGC+CGG | 0.481744 | 1.4:-73959436 | MS.gene34039:CDS |
| AGCTGCTTTCGCTGGATGGT+TGG | 0.482899 | 1.4:-73959997 | MS.gene34039:CDS |
| CTCTGATCCAAACCTGCAAA+AGG | 0.483664 | 1.4:-73955198 | MS.gene34039:CDS |
| ATCAGAGTTTCTGGTTATGG+TGG | 0.483950 | 1.4:-73954608 | MS.gene34039:CDS |
| CTTAAGAGCTCCATGCCCAC+TGG | 0.486466 | 1.4:+73955932 | None:intergenic |
| CCACTGGCCGTGAATTCAAC+CGG | 0.486623 | 1.4:-73957118 | MS.gene34039:CDS |
| GATTGATGAAGCTATTCGTT+TGG | 0.490091 | 1.4:-73956690 | MS.gene34039:intron |
| GAGTTTCTGGTTATGGTGGG+TGG | 0.496649 | 1.4:-73954604 | MS.gene34039:CDS |
| TAGGAGCTGCTTTCGCTGGA+TGG | 0.498666 | 1.4:-73960001 | MS.gene34039:CDS |
| AGAGCTTCTGGTGTGGGTGG+AGG | 0.503316 | 1.4:-73955465 | MS.gene34039:CDS |
| TCCGCTAGAGCTTCTGGTGT+GGG | 0.505271 | 1.4:-73955471 | MS.gene34039:CDS |
| TTTGTTATCAAGGACTGCCT+TGG | 0.505639 | 1.4:+73957268 | None:intergenic |
| TCTGTGACAATAGTTGTTCC+AGG | 0.506883 | 1.4:+73956955 | None:intergenic |
| AGCTCCTATTGCTTCAGCAA+CGG | 0.507243 | 1.4:+73960016 | None:intergenic |
| CTGTCTTGTCCTCGGGATTG+GGG | 0.509666 | 1.4:+73957306 | None:intergenic |
| GCAATTGAAACCAGTGGGCA+TGG | 0.513594 | 1.4:-73955942 | MS.gene34039:CDS |
| TTAGACCTGTAGCAATTTGG+CGG | 0.514455 | 1.4:+73959908 | None:intergenic |
| TCAGCCTTGAACAAATTTGT+CGG | 0.515210 | 1.4:-73954362 | MS.gene34039:CDS |
| TCCATATAGTTGTTGATGCA+GGG | 0.521303 | 1.4:-73957843 | MS.gene34039:CDS |
| ACATTTATCGAAAAGAAACT+TGG | 0.521337 | 1.4:-73956907 | MS.gene34039:intron |
| AAGAACAATAGCTGCCATCA+AGG | 0.525750 | 1.4:+73957082 | None:intergenic |
| GACTTTCTAAAGCTTCAAAA+CGG | 0.526949 | 1.4:-73960331 | MS.gene34039:CDS |
| TGGCGGATATCCGGGAATCA+TGG | 0.527906 | 1.4:+73959925 | None:intergenic |
| ATAGTTGTTGATGCAGGGAA+TGG | 0.529461 | 1.4:-73957838 | MS.gene34039:CDS |
| TTGATGGTGTCGAGGGAGAG+GGG | 0.533354 | 1.4:-73960055 | MS.gene34039:CDS |
| GATATCCGCCAAATTGCTAC+AGG | 0.533406 | 1.4:-73959913 | MS.gene34039:intron |
| ACCCTCCTTTAAGATCTGGA+TGG | 0.533653 | 1.4:+73955361 | None:intergenic |
| CCGGTTGAATTCACGGCCAG+TGG | 0.534089 | 1.4:+73957118 | None:intergenic |
| AAAGGTGCTGGAACCTCTTG+GGG | 0.537634 | 1.4:-73957461 | MS.gene34039:CDS |
| TCTCAGGTGGCAAACATCAT+CGG | 0.537657 | 1.4:-73956736 | MS.gene34039:intron |
| TAAGAGGAAGTACAGGATCA+TGG | 0.537973 | 1.4:+73954561 | None:intergenic |
| TCAGGGAAGTTGACATGGAC+TGG | 0.538210 | 1.4:-73960753 | MS.gene34039:CDS |
| TCAGAGTTTCTGGTTATGGT+GGG | 0.539366 | 1.4:-73954607 | MS.gene34039:CDS |
| TGTACTTCCTCTTAACATTG+AGG | 0.540776 | 1.4:-73954552 | MS.gene34039:intron |
| CTTCCCAAGACCACCAGCAT+TGG | 0.546188 | 1.4:+73958495 | None:intergenic |
| TGAACAATAGGCAAAGGTGC+TGG | 0.546287 | 1.4:-73957473 | MS.gene34039:intron |
| TAAATGTCACCCACCCATAG+TGG | 0.548370 | 1.4:+73959401 | None:intergenic |
| TGATGATGGTGCATACCTAA+TGG | 0.551834 | 1.4:-73955895 | MS.gene34039:intron |
| TCTTTGATACTGATGTGGAC+AGG | 0.554506 | 1.4:-73957229 | MS.gene34039:intron |
| CATGGAGTGATAATCTAAGA+AGG | 0.555775 | 1.4:+73954579 | None:intergenic |
| CGCAAAGCAGCTGGAAACAT+AGG | 0.559931 | 1.4:-73958322 | MS.gene34039:intron |
| AGCAATGAAAGCTATAACCA+AGG | 0.561872 | 1.4:-73957285 | MS.gene34039:CDS |
| TCTGCCGCTGTGGATTCCAC+TGG | 0.563506 | 1.4:-73957134 | MS.gene34039:CDS |
| CGGAGAAATATTCTCTGCAA+TGG | 0.566331 | 1.4:-73960675 | MS.gene34039:intron |
| ATCTGGCAATTGAAACCAGT+GGG | 0.566894 | 1.4:-73955947 | MS.gene34039:CDS |
| TCAATGTTAAGAGGAAGTAC+AGG | 0.567339 | 1.4:+73954554 | None:intergenic |
| TGGTCTAATAGAAGGACTCC+AGG | 0.567462 | 1.4:-73955427 | MS.gene34039:CDS |
| CATACCCCTTCGTAATTCAC+AGG | 0.567655 | 1.4:+73955173 | None:intergenic |
| GAAAACAATTGGCTTGATGA+TGG | 0.569027 | 1.4:-73955909 | MS.gene34039:CDS |
| TTCTTCTAGATCTGCCGCTG+TGG | 0.569134 | 1.4:-73957144 | MS.gene34039:intron |
| TGTCACAGACAGTGTGACTT+CGG | 0.572988 | 1.4:-73956941 | MS.gene34039:CDS |
| AACCATCCAGATCTTAAAGG+AGG | 0.579963 | 1.4:-73955363 | MS.gene34039:CDS |
| TTCCGCTAGAGCTTCTGGTG+TGG | 0.584850 | 1.4:-73955472 | MS.gene34039:CDS |
| GTCAACTTCCCTGAAGGAGA+GGG | 0.588017 | 1.4:+73960762 | None:intergenic |
| AATTATCTTTGATACTGATG+TGG | 0.589127 | 1.4:-73957234 | MS.gene34039:CDS |
| TGACAATGTGCGCAATTGCA+TGG | 0.590504 | 1.4:+73960722 | None:intergenic |
| GTCCATGTCAACTTCCCTGA+AGG | 0.592079 | 1.4:+73960756 | None:intergenic |
| ATTGCAGAGAATATTTCTCC+GGG | 0.592981 | 1.4:+73960677 | None:intergenic |
| TGATGGTGTCGAGGGAGAGG+GGG | 0.593434 | 1.4:-73960054 | MS.gene34039:CDS |
| GCTAGAGCTTCTGGTGTGGG+TGG | 0.593560 | 1.4:-73955468 | MS.gene34039:CDS |
| CGGGAAGTAAAATCGTTCAA+GGG | 0.597552 | 1.4:+73960696 | None:intergenic |
| ACAGACAGTGTGACTTCGGA+TGG | 0.598658 | 1.4:-73956937 | MS.gene34039:CDS |
| AGTGTGCTATTGAACATAGC+TGG | 0.600868 | 1.4:+73958897 | None:intergenic |
| AGGCTCCTGTGAATTACGAA+GGG | 0.601239 | 1.4:-73955178 | MS.gene34039:CDS |
| ATAGTGGACAACTTCTAGGC+CGG | 0.601912 | 1.4:+73959417 | None:intergenic |
| GTTGATGCAGGGAATGGAGC+AGG | 0.602757 | 1.4:-73957832 | MS.gene34039:CDS |
| ACCATCCAGATCTTAAAGGA+GGG | 0.605031 | 1.4:-73955362 | MS.gene34039:intron |
| TTTCAGAATGCGATTTCTCG+AGG | 0.606158 | 1.4:-73959451 | MS.gene34039:intron |
| TGTCAACTTCCCTGAAGGAG+AGG | 0.608366 | 1.4:+73960761 | None:intergenic |
| ACCCACACCAGAAGCTCTAG+CGG | 0.612694 | 1.4:+73955470 | None:intergenic |
| AAGGCTCCTGTGAATTACGA+AGG | 0.618895 | 1.4:-73955179 | MS.gene34039:CDS |
| CCCACAGAGAAACCATTGGA+GGG | 0.622390 | 1.4:-73957868 | MS.gene34039:intron |
| CCAGAAGTTATTGCCCCAAG+AGG | 0.622873 | 1.4:+73957448 | None:intergenic |
| GTGGCTCTTGATGGTGTCGA+GGG | 0.623636 | 1.4:-73960062 | MS.gene34039:CDS |
| GCCCACAGAGAAACCATTGG+AGG | 0.624310 | 1.4:-73957869 | MS.gene34039:intron |
| TCTGCCCACAGAGAAACCAT+TGG | 0.625485 | 1.4:-73957872 | MS.gene34039:intron |
| ACTATATGGAAACCCTCCAA+TGG | 0.625727 | 1.4:+73957856 | None:intergenic |
| TGTGGCTCTTGATGGTGTCG+AGG | 0.626077 | 1.4:-73960063 | MS.gene34039:CDS |
| AAACATCATCGGTTCAAGAG+AGG | 0.635786 | 1.4:-73956725 | MS.gene34039:CDS |
| ATATAGTGACATACGTGGTG+TGG | 0.642176 | 1.4:-73960081 | MS.gene34039:intron |
| CTGACAGAACTCTAATGGGG+AGG | 0.664819 | 1.4:-73955976 | MS.gene34039:intron |
| CATCTGGCAATTGAAACCAG+TGG | 0.674266 | 1.4:-73955948 | MS.gene34039:CDS |
| GGCTCCTGTGAATTACGAAG+GGG | 0.676375 | 1.4:-73955177 | MS.gene34039:intron |
| CTTCAGCAACGGGTTCAGTG+AGG | 0.677929 | 1.4:+73960027 | None:intergenic |
| GTTCAATAGCACACTCACAA+AGG | 0.678351 | 1.4:-73958889 | MS.gene34039:CDS |
| GATGCAGGGAATGGAGCAGG+TGG | 0.686283 | 1.4:-73957829 | MS.gene34039:CDS |
| AAACCATATCCCCAATCCCG+AGG | 0.688417 | 1.4:-73957315 | MS.gene34039:CDS |
| TTGCTGACAGAACTCTAATG+GGG | 0.695832 | 1.4:-73955979 | MS.gene34039:intron |
| AATTTATATAGTGACATACG+TGG | 0.728348 | 1.4:-73960086 | MS.gene34039:intron |
| ACGGCCAGTGGAATCCACAG+CGG | 0.746892 | 1.4:+73957130 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAAAGTAAAATAG+GGG | - | chr1.4:73956056-73956075 | MS.gene34039:intron | 10.0% |
| !! | AAATAGTTAGAATAATAATA+AGG | + | chr1.4:73956163-73956182 | None:intergenic | 10.0% |
| !! | AATAAAAAAAATAAGCAAAT+GGG | + | chr1.4:73956927-73956946 | None:intergenic | 10.0% |
| !! | AATTAATAAAGAGATTAATT+TGG | + | chr1.4:73959303-73959322 | None:intergenic | 10.0% |
| !! | ATGAAAGATAAATAAAATAA+TGG | + | chr1.4:73955768-73955787 | None:intergenic | 10.0% |
| !! | TAATAAAAAAAATAAGCAAA+TGG | + | chr1.4:73956928-73956947 | None:intergenic | 10.0% |
| !!! | TATTATTCTAACTATTTTAA+TGG | - | chr1.4:73956166-73956185 | MS.gene34039:intron | 10.0% |
| !! | AAATAAAAAAGTAAAATAGG+GGG | - | chr1.4:73956057-73956076 | MS.gene34039:intron | 15.0% |
| !! | AACTTATATATTATCTACAA+TGG | - | chr1.4:73954525-73954544 | MS.gene34039:intron | 15.0% |
| !! | ATATGCTAAATATTTAACTA+TGG | - | chr1.4:73959122-73959141 | MS.gene34039:intron | 15.0% |
| !! | TAAACAAAAAAAATCATTCA+GGG | + | chr1.4:73959412-73959431 | None:intergenic | 15.0% |
| !! | TAAATAAAGTAGATGAATAA+TGG | - | chr1.4:73957139-73957158 | MS.gene34039:intron | 15.0% |
| !! | TAGGATATAATATATATTCT+AGG | - | chr1.4:73955881-73955900 | MS.gene34039:intron | 15.0% |
| !! | TATCAGAAAAAAATATATAC+TGG | - | chr1.4:73957449-73957468 | MS.gene34039:CDS | 15.0% |
| !!! | TATAGAGAGTATAATTAATT+GGG | - | chr1.4:73957589-73957608 | MS.gene34039:intron | 15.0% |
| !!! | TTAACATTTTTGTTTTCTAA+TGG | - | chr1.4:73954703-73954722 | MS.gene34039:intron | 15.0% |
| !!! | TTTTATTTTTTTCCTGAATT+TGG | + | chr1.4:73956045-73956064 | None:intergenic | 15.0% |
| !! | AATCAAAGAATTAGATCATT+CGG | - | chr1.4:73959555-73959574 | MS.gene34039:intron | 20.0% |
| !! | AATGTATCAGTATTTGTATA+AGG | - | chr1.4:73954622-73954641 | MS.gene34039:intron | 20.0% |
| !! | AATTTCTAATATGCAATGAT+TGG | - | chr1.4:73960432-73960451 | MS.gene34039:intron | 20.0% |
| !! | ATGTATCAGTATTTGTATAA+GGG | - | chr1.4:73954623-73954642 | MS.gene34039:intron | 20.0% |
| !! | GTAAACAAAAAAAATCATTC+AGG | + | chr1.4:73959413-73959432 | None:intergenic | 20.0% |
| !! | TGGTATGGATAAATTTAAAT+TGG | - | chr1.4:73958245-73958264 | MS.gene34039:intron | 20.0% |
| !! | TTAATTGAATTTGTAGTGTT+TGG | - | chr1.4:73960140-73960159 | MS.gene34039:intron | 20.0% |
| !!! | AAACCTTCAAAATATTTTGA+AGG | + | chr1.4:73955270-73955289 | None:intergenic | 20.0% |
| !!! | AAAGATCCGAATTTTAAAAT+AGG | - | chr1.4:73956083-73956102 | MS.gene34039:intron | 20.0% |
| !!! | AAGATCCGAATTTTAAAATA+GGG | - | chr1.4:73956084-73956103 | MS.gene34039:intron | 20.0% |
| !!! | AATATATACTGGTTTTTCTT+TGG | - | chr1.4:73957460-73957479 | MS.gene34039:CDS | 20.0% |
| !!! | ATATATACTGGTTTTTCTTT+GGG | - | chr1.4:73957461-73957480 | MS.gene34039:CDS | 20.0% |
| !!! | ATTCATTGATACTGATTTTT+AGG | - | chr1.4:73955862-73955881 | MS.gene34039:intron | 20.0% |
| !!! | ATTTTCTGATATATGAAAGA+TGG | - | chr1.4:73955351-73955370 | MS.gene34039:intron | 20.0% |
| !!! | CTATAGAGAGTATAATTAAT+TGG | - | chr1.4:73957588-73957607 | MS.gene34039:intron | 20.0% |
| !!! | GATTGTGTCAAATTTTATAA+TGG | - | chr1.4:73955294-73955313 | MS.gene34039:intron | 20.0% |
| !!! | GTATTCTAAAATCTAAATAG+TGG | + | chr1.4:73954970-73954989 | None:intergenic | 20.0% |
| !!! | TACTTTTGATAGTATGTATA+TGG | - | chr1.4:73955602-73955621 | MS.gene34039:intron | 20.0% |
| !!! | TCATTGATTGAATTATACTA+CGG | - | chr1.4:73960040-73960059 | MS.gene34039:CDS | 20.0% |
| !!! | TTGATTTATTCTTTAGCTTT+TGG | - | chr1.4:73954674-73954693 | MS.gene34039:intron | 20.0% |
| !!! | TTTATTTTTACTTTCATCTG+CGG | - | chr1.4:73955472-73955491 | MS.gene34039:CDS | 20.0% |
| !!! | TTTGAAAAATTCTGAGATAA+TGG | - | chr1.4:73956722-73956741 | MS.gene34039:CDS | 20.0% |
| ! | AAAATTAGCGGTAAAATTGT+AGG | - | chr1.4:73960164-73960183 | MS.gene34039:intron | 25.0% |
| ! | AAATTAGCGGTAAAATTGTA+GGG | - | chr1.4:73960165-73960184 | MS.gene34039:intron | 25.0% |
| ! | AAATTTAGTCAAAATGCACA+AGG | + | chr1.4:73958492-73958511 | None:intergenic | 25.0% |
| ! | AACCACTCAATTATAAGTTT+AGG | - | chr1.4:73959365-73959384 | MS.gene34039:intron | 25.0% |
| ! | AAGCTTATGATAAACTTCAA+GGG | + | chr1.4:73958299-73958318 | None:intergenic | 25.0% |
| ! | AATTATCTTTGATACTGATG+TGG | - | chr1.4:73957898-73957917 | MS.gene34039:intron | 25.0% |
| ! | AATTTATATAGTGACATACG+TGG | - | chr1.4:73955046-73955065 | MS.gene34039:intron | 25.0% |
| ! | ACAAAAAGCAATAAATGCTA+AGG | + | chr1.4:73957359-73957378 | None:intergenic | 25.0% |
| ! | ACAATAAAGTTATTACCATC+AGG | + | chr1.4:73957726-73957745 | None:intergenic | 25.0% |
| ! | ACACATTCATATAAAAAGCT+TGG | + | chr1.4:73954599-73954618 | None:intergenic | 25.0% |
| ! | ACATTTATCGAAAAGAAACT+TGG | - | chr1.4:73958225-73958244 | MS.gene34039:intron | 25.0% |
| ! | ACTATTACAGTTCAGTAAAA+AGG | + | chr1.4:73956380-73956399 | None:intergenic | 25.0% |
| ! | AGAGTATAATTAATTGGGAA+TGG | - | chr1.4:73957594-73957613 | MS.gene34039:intron | 25.0% |
| ! | AGCATTTATCGTAGTAATAT+TGG | - | chr1.4:73959262-73959281 | MS.gene34039:intron | 25.0% |
| ! | AGCTAATGATAGTTACTAAA+CGG | - | chr1.4:73960295-73960314 | MS.gene34039:intron | 25.0% |
| ! | ATAGGAAATGAAAACTGAAA+CGG | - | chr1.4:73958762-73958781 | MS.gene34039:intron | 25.0% |
| ! | ATGATAATAAGAGTCTAGAA+CGG | + | chr1.4:73954484-73954503 | None:intergenic | 25.0% |
| ! | ATTATGATAACAGGTATGTT+AGG | - | chr1.4:73956298-73956317 | MS.gene34039:intron | 25.0% |
| ! | CAATTCTGTCAAAAATCAAA+AGG | + | chr1.4:73954657-73954676 | None:intergenic | 25.0% |
| ! | CAATTTATCTGACTTCTATA+AGG | + | chr1.4:73958526-73958545 | None:intergenic | 25.0% |
| ! | CACATTCATATAAAAAGCTT+GGG | + | chr1.4:73954598-73954617 | None:intergenic | 25.0% |
| ! | CTAAAATACTTAGGCTTATT+TGG | - | chr1.4:73958580-73958599 | MS.gene34039:intron | 25.0% |
| ! | CTTTATTGTGGGAATAATTT+CGG | - | chr1.4:73957737-73957756 | MS.gene34039:intron | 25.0% |
| ! | GAACATTTCTTTCTATGAAA+TGG | - | chr1.4:73956354-73956373 | MS.gene34039:intron | 25.0% |
| ! | GATGGTAATAACTTTATTGT+GGG | - | chr1.4:73957726-73957745 | MS.gene34039:intron | 25.0% |
| ! | GCATTTATCGTAGTAATATT+GGG | - | chr1.4:73959263-73959282 | MS.gene34039:intron | 25.0% |
| ! | GTGAACTTAACATTAACATA+TGG | + | chr1.4:73959832-73959851 | None:intergenic | 25.0% |
| ! | TATCTTTCATTATTTGCGTA+AGG | - | chr1.4:73955778-73955797 | MS.gene34039:intron | 25.0% |
| ! | TCATCAAAAAAATGAAGGTT+TGG | + | chr1.4:73956115-73956134 | None:intergenic | 25.0% |
| ! | TCGTAACTAAAAGTAGATAT+AGG | - | chr1.4:73958744-73958763 | MS.gene34039:intron | 25.0% |
| ! | TGATGGTAATAACTTTATTG+TGG | - | chr1.4:73957725-73957744 | MS.gene34039:intron | 25.0% |
| ! | TGCTAAATATTTAACTATGG+AGG | - | chr1.4:73959125-73959144 | MS.gene34039:intron | 25.0% |
| ! | TGGATAAATTTAAATTGGCA+TGG | - | chr1.4:73958250-73958269 | MS.gene34039:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr1.4:73958925-73958944 | MS.gene34039:intron | 25.0% |
| !! | AAGTTTCTTTTCGATAAATG+TGG | + | chr1.4:73958226-73958245 | None:intergenic | 25.0% |
| !! | AGAAGTAAGACTTTTATTGT+TGG | - | chr1.4:73958075-73958094 | MS.gene34039:intron | 25.0% |
| !! | ATTAAACTCGCATAACATTT+TGG | - | chr1.4:73955926-73955945 | MS.gene34039:CDS | 25.0% |
| !! | CAAGTATTTTGTGTTAAAAG+AGG | - | chr1.4:73955435-73955454 | MS.gene34039:CDS | 25.0% |
| !! | TGTTAATGCTAATTTTTCTC+AGG | - | chr1.4:73958380-73958399 | MS.gene34039:CDS | 25.0% |
| !!! | ACCTTCATTTTTTTGATGAT+AGG | - | chr1.4:73956116-73956135 | MS.gene34039:intron | 25.0% |
| !!! | AGATCCGAATTTTAAAATAG+GGG | - | chr1.4:73956085-73956104 | MS.gene34039:intron | 25.0% |
| !!! | CCTTCATTTTTTTGATGATA+GGG | - | chr1.4:73956117-73956136 | MS.gene34039:intron | 25.0% |
| !!! | CTTCATTTTTTTGATGATAG+GGG | - | chr1.4:73956118-73956137 | MS.gene34039:intron | 25.0% |
| !!! | GAACCTTCAAAATATTTTGA+AGG | - | chr1.4:73955264-73955283 | MS.gene34039:intron | 25.0% |
| !!! | TTCATTTTTTTGATGATAGG+GGG | - | chr1.4:73956119-73956138 | MS.gene34039:intron | 25.0% |
| AAACCAGTGTTGTCAAATAT+TGG | + | chr1.4:73957093-73957112 | None:intergenic | 30.0% | |
| AACAACGTGCAATATGAAAA+TGG | + | chr1.4:73956461-73956480 | None:intergenic | 30.0% | |
| AATCCTTCACAAATTAGCTA+TGG | - | chr1.4:73957030-73957049 | MS.gene34039:intron | 30.0% | |
| AATGACACAAAAATCAGATG+AGG | - | chr1.4:73956017-73956036 | MS.gene34039:intron | 30.0% | |
| AATTAGCGGTAAAATTGTAG+GGG | - | chr1.4:73960166-73960185 | MS.gene34039:intron | 30.0% | |
| AATTCCTCCATAAAATGCAA+TGG | - | chr1.4:73957001-73957020 | MS.gene34039:intron | 30.0% | |
| AATTTAGACCTGTAGCAATT+TGG | + | chr1.4:73955230-73955249 | None:intergenic | 30.0% | |
| ACGACTTTGCTGAAATAAAA+TGG | - | chr1.4:73956834-73956853 | MS.gene34039:intron | 30.0% | |
| AGCCTAAACTTATAATTGAG+TGG | + | chr1.4:73959370-73959389 | None:intergenic | 30.0% | |
| AGCGTGCATATTCTAATATT+TGG | + | chr1.4:73957541-73957560 | None:intergenic | 30.0% | |
| ATGACACAAAAATCAGATGA+GGG | - | chr1.4:73956018-73956037 | MS.gene34039:intron | 30.0% | |
| CCCTATCATCAAAAAAATGA+AGG | + | chr1.4:73956120-73956139 | None:intergenic | 30.0% | |
| CTAGACTCTTATTATCATAC+AGG | - | chr1.4:73954486-73954505 | MS.gene34039:intron | 30.0% | |
| CTATGCATGCTAAAATACTT+AGG | - | chr1.4:73958571-73958590 | MS.gene34039:intron | 30.0% | |
| GAAATAAAATGGTAACTTGG+TGG | - | chr1.4:73956845-73956864 | MS.gene34039:intron | 30.0% | |
| GAAGCTTATGATAAACTTCA+AGG | + | chr1.4:73958300-73958319 | None:intergenic | 30.0% | |
| GCTAATGATAGTTACTAAAC+GGG | - | chr1.4:73960296-73960315 | MS.gene34039:intron | 30.0% | |
| GCTGAAATAAAATGGTAACT+TGG | - | chr1.4:73956842-73956861 | MS.gene34039:intron | 30.0% | |
| GTAGTGTTTGGTAAAATTAG+CGG | - | chr1.4:73960152-73960171 | MS.gene34039:intron | 30.0% | |
| TAACACAAAATACTTGCAAG+TGG | + | chr1.4:73955431-73955450 | None:intergenic | 30.0% | |
| TAACCAATATTTGACAACAC+TGG | - | chr1.4:73957087-73957106 | MS.gene34039:CDS | 30.0% | |
| TAAGTTGTTGTGAACTCTAA+TGG | - | chr1.4:73955811-73955830 | MS.gene34039:intron | 30.0% | |
| TACGATAAATGCTTACCATT+AGG | + | chr1.4:73959255-73959274 | None:intergenic | 30.0% | |
| TATATATTCTAGGCTAGCAT+AGG | - | chr1.4:73955891-73955910 | MS.gene34039:intron | 30.0% | |
| TATCGAAAAGAAACTTGGTA+TGG | - | chr1.4:73958230-73958249 | MS.gene34039:intron | 30.0% | |
| TCAATGAATAAGAATCTGCT+TGG | + | chr1.4:73955851-73955870 | None:intergenic | 30.0% | |
| TGCTACAAATCTTGATATTG+CGG | - | chr1.4:73954860-73954879 | MS.gene34039:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr1.4:73958896-73958915 | None:intergenic | 30.0% | |
| TTCATATAAAAAGCTTGGGA+AGG | + | chr1.4:73954594-73954613 | None:intergenic | 30.0% | |
| TTGAATCCATTTCTGTTGAA+AGG | + | chr1.4:73956609-73956628 | None:intergenic | 30.0% | |
| ! | AACTTCTGGTAGTCAATTTT+TGG | - | chr1.4:73957698-73957717 | MS.gene34039:intron | 30.0% |
| ! | AATATTTGACAACACTGGTT+TGG | - | chr1.4:73957092-73957111 | MS.gene34039:CDS | 30.0% |
| ! | ATAAGGCTTAAATGCACTTT+TGG | + | chr1.4:73956146-73956165 | None:intergenic | 30.0% |
| ! | ATGAACATACTTGTTACTGT+AGG | - | chr1.4:73960670-73960689 | MS.gene34039:intron | 30.0% |
| ! | CAAATCTTTCAGATCTTTTC+GGG | - | chr1.4:73959868-73959887 | MS.gene34039:intron | 30.0% |
| ! | CATTTTACCTCAATGTTAAG+AGG | + | chr1.4:73960590-73960609 | None:intergenic | 30.0% |
| ! | CCAAATCTTTCAGATCTTTT+CGG | - | chr1.4:73959867-73959886 | MS.gene34039:intron | 30.0% |
| ! | GATCTTTTATGCAAAGCATA+TGG | - | chr1.4:73957496-73957515 | MS.gene34039:intron | 30.0% |
| ! | GTGTTGTCAAATATTGGTTA+TGG | + | chr1.4:73957087-73957106 | None:intergenic | 30.0% |
| ! | TAATGCTAATTTTTCTCAGG+TGG | - | chr1.4:73958383-73958402 | MS.gene34039:CDS | 30.0% |
| ! | TCTAAGATATCTTTGATGTC+AGG | + | chr1.4:73956663-73956682 | None:intergenic | 30.0% |
| ! | TCTTTTCGATAAATGTGGTA+AGG | + | chr1.4:73958221-73958240 | None:intergenic | 30.0% |
| ! | TTCAAATTTTTCACCAATGC+TGG | - | chr1.4:73956624-73956643 | MS.gene34039:intron | 30.0% |
| !! | ATGACTCAGTTTGTTATTGT+AGG | - | chr1.4:73957181-73957200 | MS.gene34039:intron | 30.0% |
| !! | CTTTTATTGTTGGCTATATC+TGG | - | chr1.4:73958085-73958104 | MS.gene34039:intron | 30.0% |
| !! | GACTTTCTAAAGCTTCAAAA+CGG | - | chr1.4:73954801-73954820 | MS.gene34039:intron | 30.0% |
| !! | TTTTCGTTTGTTAATGTCCA+CGG | - | chr1.4:73956496-73956515 | MS.gene34039:intron | 30.0% |
| !!! | AATGGTTTTGAAGAGAATTC+TGG | - | chr1.4:73955312-73955331 | MS.gene34039:intron | 30.0% |
| !!! | ATCCGAATTTTAAAATAGGG+GGG | - | chr1.4:73956087-73956106 | MS.gene34039:intron | 30.0% |
| !!! | ATGGTTTTAAATTGCAACTG+CGG | - | chr1.4:73954834-73954853 | MS.gene34039:intron | 30.0% |
| !!! | GATCCGAATTTTAAAATAGG+GGG | - | chr1.4:73956086-73956105 | MS.gene34039:intron | 30.0% |
| !!! | TGATATTCACTGTTGCTTTT+TGG | - | chr1.4:73957636-73957655 | MS.gene34039:intron | 30.0% |
| !!! | TTGTGTCATTTTTGTCATTG+TGG | + | chr1.4:73956007-73956026 | None:intergenic | 30.0% |
| AAGTCAGTCATGTCAAGATA+TGG | + | chr1.4:73954786-73954805 | None:intergenic | 35.0% | |
| ACAAGGTAGAGTCAAGTTAA+AGG | + | chr1.4:73959505-73959524 | None:intergenic | 35.0% | |
| AGAAACTGTGCTGAAACATT+TGG | - | chr1.4:73959898-73959917 | MS.gene34039:intron | 35.0% | |
| AGCAATGAAAGCTATAACCA+AGG | - | chr1.4:73957847-73957866 | MS.gene34039:CDS | 35.0% | |
| ATGGTCCACCATCAATAAAA+CGG | + | chr1.4:73956971-73956990 | None:intergenic | 35.0% | |
| ATTGCAGAGAATATTTCTCC+GGG | + | chr1.4:73954458-73954477 | None:intergenic | 35.0% | |
| ATTGCTGACAGAACTCTAAT+GGG | - | chr1.4:73959152-73959171 | MS.gene34039:intron | 35.0% | |
| ATTTCGTATAAAGCAGAGGT+GGG | + | chr1.4:73959480-73959499 | None:intergenic | 35.0% | |
| CAAAACCATCCAGATCTTAA+AGG | - | chr1.4:73959766-73959785 | MS.gene34039:intron | 35.0% | |
| CAGCATTTGAGAGTTTCTAT+TGG | - | chr1.4:73955184-73955203 | MS.gene34039:CDS | 35.0% | |
| CATGGAGTGATAATCTAAGA+AGG | + | chr1.4:73960556-73960575 | None:intergenic | 35.0% | |
| CATTGCAGAGAATATTTCTC+CGG | + | chr1.4:73954459-73954478 | None:intergenic | 35.0% | |
| CCGAAAAGATCTGAAAGATT+TGG | + | chr1.4:73959870-73959889 | None:intergenic | 35.0% | |
| CTTATGATAAACTTCAAGGG+AGG | + | chr1.4:73958296-73958315 | None:intergenic | 35.0% | |
| GAGCTCTTAAGGAAAACAAT+TGG | - | chr1.4:73959212-73959231 | MS.gene34039:intron | 35.0% | |
| GATTGATGAAGCTATTCGTT+TGG | - | chr1.4:73958442-73958461 | MS.gene34039:CDS | 35.0% | |
| GCATATGGTTTACAAATCTG+CGG | - | chr1.4:73957511-73957530 | MS.gene34039:intron | 35.0% | |
| GGTTTGGAGATACAAATACT+GGG | - | chr1.4:73957108-73957127 | MS.gene34039:CDS | 35.0% | |
| TAACAATGGCTTCTGTATAC+AGG | - | chr1.4:73957785-73957804 | MS.gene34039:intron | 35.0% | |
| TATAAAAAGCTTGGGAAGGA+AGG | + | chr1.4:73954590-73954609 | None:intergenic | 35.0% | |
| TATTGCTGACAGAACTCTAA+TGG | - | chr1.4:73959151-73959170 | MS.gene34039:intron | 35.0% | |
| TCAGCCTTGAACAAATTTGT+CGG | - | chr1.4:73960770-73960789 | MS.gene34039:CDS | 35.0% | |
| TCCATATAGTTGTTGATGCA+GGG | - | chr1.4:73957289-73957308 | MS.gene34039:CDS | 35.0% | |
| TGAACTGTAATAGTGAGTTG+TGG | - | chr1.4:73956386-73956405 | MS.gene34039:intron | 35.0% | |
| TGGCATATTCATTTATGACG+TGG | + | chr1.4:73955987-73956006 | None:intergenic | 35.0% | |
| TGGCTAAGCTTAATTGTGAA+TGG | + | chr1.4:73956441-73956460 | None:intergenic | 35.0% | |
| TGTACTTCCTCTTAACATTG+AGG | - | chr1.4:73960580-73960599 | MS.gene34039:intron | 35.0% | |
| TTAGCGATTACTATGAAGCA+CGG | - | chr1.4:73958807-73958826 | MS.gene34039:intron | 35.0% | |
| TTCAATCAGATCAGAGTTTC+TGG | - | chr1.4:73960515-73960534 | MS.gene34039:intron | 35.0% | |
| TTCATTATTTGCGTAAGGAC+TGG | - | chr1.4:73955783-73955802 | MS.gene34039:intron | 35.0% | |
| TTCCATATAGTTGTTGATGC+AGG | - | chr1.4:73957288-73957307 | MS.gene34039:CDS | 35.0% | |
| ! | AAATTTTTCACCAATGCTGG+TGG | - | chr1.4:73956627-73956646 | MS.gene34039:intron | 35.0% |
| ! | AGCTAGTTTATAGCTGATAG+AGG | - | chr1.4:73960108-73960127 | MS.gene34039:intron | 35.0% |
| ! | CATTTTTATGTCCTGTTGAC+GGG | - | chr1.4:73956272-73956291 | MS.gene34039:intron | 35.0% |
| ! | CTTGATAACAAAGCTGATCT+TGG | - | chr1.4:73957875-73957894 | MS.gene34039:intron | 35.0% |
| ! | GAAGTATACAGAGAAGTGTA+AGG | + | chr1.4:73958122-73958141 | None:intergenic | 35.0% |
| ! | GCATTTTTATGTCCTGTTGA+CGG | - | chr1.4:73956271-73956290 | MS.gene34039:intron | 35.0% |
| ! | GGATGTTTGTTTCTTCCATT+TGG | - | chr1.4:73954724-73954743 | MS.gene34039:intron | 35.0% |
| ! | TCAATGTTAAGAGGAAGTAC+AGG | + | chr1.4:73960581-73960600 | None:intergenic | 35.0% |
| ! | TGATCCGACAAATTTGTTCA+AGG | + | chr1.4:73960777-73960796 | None:intergenic | 35.0% |
| ! | TGGTTTGGAGATACAAATAC+TGG | - | chr1.4:73957107-73957126 | MS.gene34039:CDS | 35.0% |
| ! | TTTCGTTTGTTAATGTCCAC+GGG | - | chr1.4:73956497-73956516 | MS.gene34039:intron | 35.0% |
| ! | TTTTACAGCTTCTGATATGG+CGG | - | chr1.4:73956868-73956887 | MS.gene34039:intron | 35.0% |
| ! | TTTTGGTGAACAATAGGCAA+AGG | - | chr1.4:73957653-73957672 | MS.gene34039:intron | 35.0% |
| !! | ATTTGGAGCCGTTTTATTGA+TGG | - | chr1.4:73956960-73956979 | MS.gene34039:CDS | 35.0% |
| !! | CAAGATCAGCTTTGTTATCA+AGG | + | chr1.4:73957877-73957896 | None:intergenic | 35.0% |
| !! | GAAAACAATTGGCTTGATGA+TGG | - | chr1.4:73959223-73959242 | MS.gene34039:intron | 35.0% |
| !! | GAGAAATCGCATTCTGAAAT+TGG | + | chr1.4:73955680-73955699 | None:intergenic | 35.0% |
| !! | TGGTTTTACAGCTTCTGATA+TGG | - | chr1.4:73956865-73956884 | MS.gene34039:intron | 35.0% |
| !!! | CTTTAAGATCTGGATGGTTT+TGG | + | chr1.4:73959768-73959787 | None:intergenic | 35.0% |
| !!! | GTTGCTTTTTGGTGAACAAT+AGG | - | chr1.4:73957647-73957666 | MS.gene34039:intron | 35.0% |
| !!! | GTTTTGACTGGTCTAATAGA+AGG | - | chr1.4:73959697-73959716 | MS.gene34039:intron | 35.0% |
| !!! | TCCCCCCCTATTTTAAAATT+CGG | + | chr1.4:73956092-73956111 | None:intergenic | 35.0% |
| !!! | TCCGAATTTTAAAATAGGGG+GGG | - | chr1.4:73956088-73956107 | MS.gene34039:intron | 35.0% |
| AAATGCTAAGGAGACTTTCG+AGG | + | chr1.4:73957347-73957366 | None:intergenic | 40.0% | |
| AACCATCCAGATCTTAAAGG+AGG | - | chr1.4:73959769-73959788 | MS.gene34039:intron | 40.0% | |
| AACGAAGATGCTGTAAAGCT+TGG | - | chr1.4:73960701-73960720 | MS.gene34039:CDS | 40.0% | |
| AACGATTCCGGTTGAATTCA+CGG | + | chr1.4:73958024-73958043 | None:intergenic | 40.0% | |
| AAGAACAATAGCTGCCATCA+AGG | + | chr1.4:73958053-73958072 | None:intergenic | 40.0% | |
| AAGTGATAGTTGGGTCTGTT+TGG | + | chr1.4:73960373-73960392 | None:intergenic | 40.0% | |
| AATAGTTGTTCCAGGATGCT+AGG | + | chr1.4:73958172-73958191 | None:intergenic | 40.0% | |
| AATTATACTACGGCCCTGTT+GGG | - | chr1.4:73960050-73960069 | MS.gene34039:CDS | 40.0% | |
| AATTCCAACACAAGCTGCTA+AGG | + | chr1.4:73960613-73960632 | None:intergenic | 40.0% | |
| ACCATCCAGATCTTAAAGGA+GGG | - | chr1.4:73959770-73959789 | MS.gene34039:intron | 40.0% | |
| ACCTTGTGTTAGAACGTGAT+AGG | - | chr1.4:73959518-73959537 | MS.gene34039:intron | 40.0% | |
| ACTATATGGAAACCCTCCAA+TGG | + | chr1.4:73957279-73957298 | None:intergenic | 40.0% | |
| ACTTGGACTTCGAGTAACAA+TGG | - | chr1.4:73957771-73957790 | MS.gene34039:intron | 40.0% | |
| ATAGTTGTTGATGCAGGGAA+TGG | - | chr1.4:73957294-73957313 | MS.gene34039:CDS | 40.0% | |
| ATATAGTGACATACGTGGTG+TGG | - | chr1.4:73955051-73955070 | MS.gene34039:intron | 40.0% | |
| ATCATAATAGACCCGTCAAC+AGG | + | chr1.4:73956286-73956305 | None:intergenic | 40.0% | |
| ATCTGGCAATTGAAACCAGT+GGG | - | chr1.4:73959185-73959204 | MS.gene34039:intron | 40.0% | |
| ATGATAAACTTCAAGGGAGG+AGG | + | chr1.4:73958293-73958312 | None:intergenic | 40.0% | |
| ATGGTTTACAAATCTGCGGT+AGG | - | chr1.4:73957515-73957534 | MS.gene34039:intron | 40.0% | |
| CAATAGTGTCCACAACACAA+GGG | + | chr1.4:73954937-73954956 | None:intergenic | 40.0% | |
| CACCTCTGCTTTATACGAAA+TGG | - | chr1.4:73959479-73959498 | MS.gene34039:intron | 40.0% | |
| CATCTGCCTTTCAACAGAAA+TGG | - | chr1.4:73956600-73956619 | MS.gene34039:intron | 40.0% | |
| CATTTCGTATAAAGCAGAGG+TGG | + | chr1.4:73959481-73959500 | None:intergenic | 40.0% | |
| CCTTGTGTTAGAACGTGATA+GGG | - | chr1.4:73959519-73959538 | MS.gene34039:intron | 40.0% | |
| CGGAGAAATATTCTCTGCAA+TGG | - | chr1.4:73954457-73954476 | MS.gene34039:intron | 40.0% | |
| CGGGAAGTAAAATCGTTCAA+GGG | + | chr1.4:73954439-73954458 | None:intergenic | 40.0% | |
| CTTGATATTGCGGCAAAATG+AGG | - | chr1.4:73954870-73954889 | MS.gene34039:intron | 40.0% | |
| GAATCGTTTGATTGCCTTGA+TGG | - | chr1.4:73958036-73958055 | MS.gene34039:intron | 40.0% | |
| GACGGGTCTATTATGATAAC+AGG | - | chr1.4:73956289-73956308 | MS.gene34039:intron | 40.0% | |
| GAGACTTTCGAGGAAACTTA+CGG | + | chr1.4:73957337-73957356 | None:intergenic | 40.0% | |
| GTAATCGCTAAAGACCTCTT+TGG | + | chr1.4:73958798-73958817 | None:intergenic | 40.0% | |
| GTTCAATAGCACACTCACAA+AGG | - | chr1.4:73956243-73956262 | MS.gene34039:intron | 40.0% | |
| TAGAAATGAAGCACAGACAC+CGG | + | chr1.4:73958973-73958992 | None:intergenic | 40.0% | |
| TCAAAACGGCAGGTTAGTAA+TGG | - | chr1.4:73954815-73954834 | MS.gene34039:intron | 40.0% | |
| TCAAGGCAATCAAACGATTC+CGG | + | chr1.4:73958036-73958055 | None:intergenic | 40.0% | |
| TCCCTGCATCAACAACTATA+TGG | + | chr1.4:73957293-73957312 | None:intergenic | 40.0% | |
| TCTGTGACAATAGTTGTTCC+AGG | + | chr1.4:73958180-73958199 | None:intergenic | 40.0% | |
| TCTTTGATACTGATGTGGAC+AGG | - | chr1.4:73957903-73957922 | MS.gene34039:intron | 40.0% | |
| TGATAAACTTCAAGGGAGGA+GGG | + | chr1.4:73958292-73958311 | None:intergenic | 40.0% | |
| TGCTCTTCTATGAGGAAACT+CGG | - | chr1.4:73959441-73959460 | MS.gene34039:CDS | 40.0% | |
| TGTGGACACTATTGCATTTG+TGG | - | chr1.4:73954943-73954962 | MS.gene34039:intron | 40.0% | |
| TGTGGAGAATATCTCCAGTT+GGG | - | chr1.4:73956404-73956423 | MS.gene34039:intron | 40.0% | |
| TTAGACCTGTAGCAATTTGG+CGG | + | chr1.4:73955227-73955246 | None:intergenic | 40.0% | |
| TTGCTGACAGAACTCTAATG+GGG | - | chr1.4:73959153-73959172 | MS.gene34039:intron | 40.0% | |
| TTGGTTATGGCAGATTACAG+TGG | + | chr1.4:73957074-73957093 | None:intergenic | 40.0% | |
| TTGTGGAGAATATCTCCAGT+TGG | - | chr1.4:73956403-73956422 | MS.gene34039:intron | 40.0% | |
| TTGTGGGAATAATTTCGGCT+AGG | - | chr1.4:73957742-73957761 | MS.gene34039:intron | 40.0% | |
| TTTACAGCTTCTGATATGGC+GGG | - | chr1.4:73956869-73956888 | MS.gene34039:intron | 40.0% | |
| TTTCAGAATGCGATTTCTCG+AGG | - | chr1.4:73955681-73955700 | MS.gene34039:intron | 40.0% | |
| TTTCATTGCTGTCTTGTCCT+CGG | + | chr1.4:73957837-73957856 | None:intergenic | 40.0% | |
| TTTCTATTGGCCATGATTCC+CGG | - | chr1.4:73955197-73955216 | MS.gene34039:CDS | 40.0% | |
| ! | ACGGTTTTCTCAAACCAAAG+AGG | - | chr1.4:73958781-73958800 | MS.gene34039:intron | 40.0% |
| ! | AGTGTGCTATTGAACATAGC+TGG | + | chr1.4:73956238-73956257 | None:intergenic | 40.0% |
| ! | CCTTGAACGATTTTACTTCC+CGG | - | chr1.4:73954437-73954456 | MS.gene34039:CDS | 40.0% |
| ! | CTGCCATAGCTAATTTGTGA+AGG | + | chr1.4:73957036-73957055 | None:intergenic | 40.0% |
| ! | GACACCATTGCATTTTATGG+AGG | + | chr1.4:73957008-73957027 | None:intergenic | 40.0% |
| ! | GTTGTGAACTCTAATGGATG+CGG | - | chr1.4:73955817-73955836 | MS.gene34039:intron | 40.0% |
| ! | GTTTTTCTTTGGGTGAGTGT+TGG | - | chr1.4:73957471-73957490 | MS.gene34039:intron | 40.0% |
| ! | TAAGAGGAAGTACAGGATCA+TGG | + | chr1.4:73960574-73960593 | None:intergenic | 40.0% |
| ! | TGCGACACCATTGCATTTTA+TGG | + | chr1.4:73957011-73957030 | None:intergenic | 40.0% |
| ! | TTGTATGCTACTTCCAACTC+CGG | + | chr1.4:73960399-73960418 | None:intergenic | 40.0% |
| ! | TTTGTTATCAAGGACTGCCT+TGG | + | chr1.4:73957867-73957886 | None:intergenic | 40.0% |
| !! | AAACATCATCGGTTCAAGAG+AGG | - | chr1.4:73958407-73958426 | MS.gene34039:CDS | 40.0% |
| !! | ATCAGAGTTTCTGGTTATGG+TGG | - | chr1.4:73960524-73960543 | MS.gene34039:intron | 40.0% |
| !! | CAGATCAGAGTTTCTGGTTA+TGG | - | chr1.4:73960521-73960540 | MS.gene34039:intron | 40.0% |
| !! | TCAGAGTTTCTGGTTATGGT+GGG | - | chr1.4:73960525-73960544 | MS.gene34039:intron | 40.0% |
| !! | TGATGATGGTGCATACCTAA+TGG | - | chr1.4:73959237-73959256 | MS.gene34039:intron | 40.0% |
| !! | TTCAGATCTTTTCGGGAGTA+TGG | - | chr1.4:73959875-73959894 | MS.gene34039:intron | 40.0% |
| !! | TTCTAAAGCTTCAAAACGGC+AGG | - | chr1.4:73954805-73954824 | MS.gene34039:intron | 40.0% |
| !! | TTTATTGATGGTGGACCATG+TGG | - | chr1.4:73956972-73956991 | MS.gene34039:intron | 40.0% |
| !!! | AGTCAATTTTTGGAGCCTGA+TGG | - | chr1.4:73957708-73957727 | MS.gene34039:intron | 40.0% |
| AAAAAGCTTGGGAAGGAAGG+TGG | + | chr1.4:73954587-73954606 | None:intergenic | 45.0% | |
| AAATTGCCATTCACTACCCG+TGG | + | chr1.4:73956516-73956535 | None:intergenic | 45.0% | |
| AAGGCTCCTGTGAATTACGA+AGG | - | chr1.4:73959953-73959972 | MS.gene34039:CDS | 45.0% | |
| AATGCCTTAGCAGCTTGTGT+TGG | - | chr1.4:73960606-73960625 | MS.gene34039:intron | 45.0% | |
| ACTATCACTTGTTCCGGAGT+TGG | - | chr1.4:73960383-73960402 | MS.gene34039:intron | 45.0% | |
| ACTCCGGAACAAGTGATAGT+TGG | + | chr1.4:73960383-73960402 | None:intergenic | 45.0% | |
| AGAAGTTGTCCACTATGGGT+GGG | - | chr1.4:73955722-73955741 | MS.gene34039:intron | 45.0% | |
| AGCTCCTATTGCTTCAGCAA+CGG | + | chr1.4:73955119-73955138 | None:intergenic | 45.0% | |
| AGCTGCAACAGAAGTCCAAA+TGG | + | chr1.4:73954742-73954761 | None:intergenic | 45.0% | |
| AGGCTCCTGTGAATTACGAA+GGG | - | chr1.4:73959954-73959973 | MS.gene34039:CDS | 45.0% | |
| ATCTTGACCTGCACAATGTG+TGG | + | chr1.4:73959625-73959644 | None:intergenic | 45.0% | |
| CATACCCCTTCGTAATTCAC+AGG | + | chr1.4:73959962-73959981 | None:intergenic | 45.0% | |
| CATCTGGCAATTGAAACCAG+TGG | - | chr1.4:73959184-73959203 | MS.gene34039:intron | 45.0% | |
| CCACAACACAAGGGTTTAAG+AGG | + | chr1.4:73954928-73954947 | None:intergenic | 45.0% | |
| CCCTATCACGTTCTAACACA+AGG | + | chr1.4:73959522-73959541 | None:intergenic | 45.0% | |
| CCCTGTTGGGTAAAACATAG+CGG | - | chr1.4:73960063-73960082 | MS.gene34039:CDS | 45.0% | |
| CCGGGAAGTAAAATCGTTCA+AGG | + | chr1.4:73954440-73954459 | None:intergenic | 45.0% | |
| CCTCTTAAACCCTTGTGTTG+TGG | - | chr1.4:73954925-73954944 | MS.gene34039:intron | 45.0% | |
| CTCCGGAACAAGTGATAGTT+GGG | + | chr1.4:73960382-73960401 | None:intergenic | 45.0% | |
| CTCTGATCCAAACCTGCAAA+AGG | - | chr1.4:73959934-73959953 | MS.gene34039:CDS | 45.0% | |
| GAATAAGAATCTGCTTGGCC+AGG | + | chr1.4:73955846-73955865 | None:intergenic | 45.0% | |
| GAATTATACTACGGCCCTGT+TGG | - | chr1.4:73960049-73960068 | MS.gene34039:CDS | 45.0% | |
| GACCCAACTATCACTTGTTC+CGG | - | chr1.4:73960377-73960396 | MS.gene34039:intron | 45.0% | |
| GATACTGATGTGGACAGGTA+AGG | - | chr1.4:73957908-73957927 | MS.gene34039:intron | 45.0% | |
| GATATCCGCCAAATTGCTAC+AGG | - | chr1.4:73955219-73955238 | MS.gene34039:CDS | 45.0% | |
| GATCTTAAAGGAGGGTAAGC+TGG | - | chr1.4:73959778-73959797 | MS.gene34039:intron | 45.0% | |
| GCAAAATGAGGCTGCATTTG+TGG | - | chr1.4:73954882-73954901 | MS.gene34039:intron | 45.0% | |
| GCAATAGTGTCCACAACACA+AGG | + | chr1.4:73954938-73954957 | None:intergenic | 45.0% | |
| GCCTAGAAGTTGTCCACTAT+GGG | - | chr1.4:73955718-73955737 | MS.gene34039:intron | 45.0% | |
| GGAGGAATTGTCTTTCCACA+TGG | + | chr1.4:73956990-73957009 | None:intergenic | 45.0% | |
| GGCCATTTCGTATAAAGCAG+AGG | + | chr1.4:73959484-73959503 | None:intergenic | 45.0% | |
| GTTATGGCAGATTACAGTGG+CGG | + | chr1.4:73957071-73957090 | None:intergenic | 45.0% | |
| TAAATGTCACCCACCCATAG+TGG | + | chr1.4:73955734-73955753 | None:intergenic | 45.0% | |
| TAATGTCCACGGGTAGTGAA+TGG | - | chr1.4:73956507-73956526 | MS.gene34039:intron | 45.0% | |
| TAGAAGTTGTCCACTATGGG+TGG | - | chr1.4:73955721-73955740 | MS.gene34039:intron | 45.0% | |
| TATCATTCTGCCTAGCATCC+TGG | - | chr1.4:73958159-73958178 | MS.gene34039:intron | 45.0% | |
| TCAGATGAGGGACCAAATTC+AGG | - | chr1.4:73956030-73956049 | MS.gene34039:intron | 45.0% | |
| TCTCAGGTGGCAAACATCAT+CGG | - | chr1.4:73958396-73958415 | MS.gene34039:CDS | 45.0% | |
| TGACAATGTGCGCAATTGCA+TGG | + | chr1.4:73954413-73954432 | None:intergenic | 45.0% | |
| TGGTCTAATAGAAGGACTCC+AGG | - | chr1.4:73959705-73959724 | MS.gene34039:intron | 45.0% | |
| TGGTTGTGTATGATCCCAAC+TGG | + | chr1.4:73956421-73956440 | None:intergenic | 45.0% | |
| TGTCACAGACAGTGTGACTT+CGG | - | chr1.4:73958191-73958210 | MS.gene34039:intron | 45.0% | |
| TGTTGTGCTTGCAGCTGTAA+AGG | - | chr1.4:73960727-73960746 | MS.gene34039:CDS | 45.0% | |
| TTCATTGCTGTCTTGTCCTC+GGG | + | chr1.4:73957836-73957855 | None:intergenic | 45.0% | |
| ! | AATTCACAGGAGCCTTTTGC+AGG | + | chr1.4:73959949-73959968 | None:intergenic | 45.0% |
| ! | CCGCTATGTTTTACCCAACA+GGG | + | chr1.4:73960066-73960085 | None:intergenic | 45.0% |
| ! | GTAGCAATTTGGCGGATATC+CGG | + | chr1.4:73955219-73955238 | None:intergenic | 45.0% |
| ! | TAGCAATTTGGCGGATATCC+GGG | + | chr1.4:73955218-73955237 | None:intergenic | 45.0% |
| ! | TCCGCTATGTTTTACCCAAC+AGG | + | chr1.4:73960067-73960086 | None:intergenic | 45.0% |
| ! | TGAACAATAGGCAAAGGTGC+TGG | - | chr1.4:73957659-73957678 | MS.gene34039:intron | 45.0% |
| ! | TTTCGGCTAGGCATTGTACT+TGG | - | chr1.4:73957754-73957773 | MS.gene34039:intron | 45.0% |
| !! | ACCCATAGTGGACAACTTCT+AGG | + | chr1.4:73955722-73955741 | None:intergenic | 45.0% |
| !! | ACCCTCCTTTAAGATCTGGA+TGG | + | chr1.4:73959774-73959793 | None:intergenic | 45.0% |
| !! | ATAGTGGACAACTTCTAGGC+CGG | + | chr1.4:73955718-73955737 | None:intergenic | 45.0% |
| !! | ATGACTTGCTGTTCACAGAC+AGG | + | chr1.4:73956583-73956602 | None:intergenic | 45.0% |
| !! | GCTTACCCTCCTTTAAGATC+TGG | + | chr1.4:73959778-73959797 | None:intergenic | 45.0% |
| !! | GGGTAAAACATAGCGGATAG+CGG | - | chr1.4:73960070-73960089 | MS.gene34039:CDS | 45.0% |
| !! | TGACTTGCTGTTCACAGACA+GGG | + | chr1.4:73956582-73956601 | None:intergenic | 45.0% |
| !! | TGGAGCCGTTTTATTGATGG+TGG | - | chr1.4:73956963-73956982 | MS.gene34039:intron | 45.0% |
| !!! | GGAGGAAGCAATGTTTTGAC+TGG | - | chr1.4:73959685-73959704 | MS.gene34039:intron | 45.0% |
| !! | AAAAAATAAAAAAGTAAAAT+AGG | - | chr1.4:73956054-73956073 | MS.gene34039:intron | 5.0% |
| !! | AAAAATAAAAAAGTAAAATA+GGG | - | chr1.4:73956055-73956074 | MS.gene34039:intron | 5.0% |
| !! | TATTAAACAATTAAAATATT+TGG | - | chr1.4:73956943-73956962 | MS.gene34039:CDS | 5.0% |
| !!! | TTTTTTTTCTATATAAAAAA+TGG | + | chr1.4:73957415-73957434 | None:intergenic | 5.0% |
| AAACCATATCCCCAATCCCG+AGG | - | chr1.4:73957817-73957836 | MS.gene34039:intron | 50.0% | |
| AAACTTCAAGGGAGGAGGGA+GGG | + | chr1.4:73958288-73958307 | None:intergenic | 50.0% | |
| AAAGCAGTTCGCAAAGCAGC+TGG | - | chr1.4:73956801-73956820 | MS.gene34039:intron | 50.0% | |
| AAGGGTCAAACCCAATCTGG+TGG | - | chr1.4:73956899-73956918 | MS.gene34039:intron | 50.0% | |
| ACAGACAGTGTGACTTCGGA+TGG | - | chr1.4:73958195-73958214 | MS.gene34039:intron | 50.0% | |
| ACCCTCCAATGGTTTCTCTG+TGG | + | chr1.4:73957268-73957287 | None:intergenic | 50.0% | |
| ACGTTGCGTGCTCTTCTATG+AGG | - | chr1.4:73959433-73959452 | MS.gene34039:CDS | 50.0% | |
| AGGGTCAAACCCAATCTGGT+GGG | - | chr1.4:73956900-73956919 | MS.gene34039:intron | 50.0% | |
| ATACGTGGTGTGGCTCTTGA+TGG | - | chr1.4:73955061-73955080 | MS.gene34039:intron | 50.0% | |
| CAAATGGGTCCCACCAGATT+GGG | + | chr1.4:73956912-73956931 | None:intergenic | 50.0% | |
| CAGTGTACCACACATTGTGC+AGG | - | chr1.4:73959615-73959634 | MS.gene34039:intron | 50.0% | |
| CCAGAAGTTATTGCCCCAAG+AGG | + | chr1.4:73957687-73957706 | None:intergenic | 50.0% | |
| CCCACAGAGAAACCATTGGA+GGG | - | chr1.4:73957264-73957283 | MS.gene34039:CDS | 50.0% | |
| CCCTCCAATGGTTTCTCTGT+GGG | + | chr1.4:73957267-73957286 | None:intergenic | 50.0% | |
| CCTCTTGGGGCAATAACTTC+TGG | - | chr1.4:73957684-73957703 | MS.gene34039:intron | 50.0% | |
| CGAAAGGGTCAAACCCAATC+TGG | - | chr1.4:73956896-73956915 | MS.gene34039:intron | 50.0% | |
| CGCAAAGCAGCTGGAAACAT+AGG | - | chr1.4:73956810-73956829 | MS.gene34039:intron | 50.0% | |
| CTCAGTTCTGCAGCAAAAGC+TGG | + | chr1.4:73959733-73959752 | None:intergenic | 50.0% | |
| CTCCTTCAGGGAAGTTGACA+TGG | - | chr1.4:73954374-73954393 | MS.gene34039:CDS | 50.0% | |
| CTGACAGAACTCTAATGGGG+AGG | - | chr1.4:73959156-73959175 | MS.gene34039:intron | 50.0% | |
| CTGCACAATGTGTGGTACAC+TGG | + | chr1.4:73959617-73959636 | None:intergenic | 50.0% | |
| GAACCCGTTGCTGAAGCAAT+AGG | - | chr1.4:73955112-73955131 | MS.gene34039:intron | 50.0% | |
| GATTGGGTTTGACCCTTTCG+TGG | + | chr1.4:73956896-73956915 | None:intergenic | 50.0% | |
| GCAATTGAAACCAGTGGGCA+TGG | - | chr1.4:73959190-73959209 | MS.gene34039:intron | 50.0% | |
| GCAGCTGTAAAGGAGTTTGC+AGG | - | chr1.4:73960737-73960756 | MS.gene34039:CDS | 50.0% | |
| GCTCCTATTGCTTCAGCAAC+GGG | + | chr1.4:73955118-73955137 | None:intergenic | 50.0% | |
| GGCCTAGAAGTTGTCCACTA+TGG | - | chr1.4:73955717-73955736 | MS.gene34039:intron | 50.0% | |
| GGCTCCTGTGAATTACGAAG+GGG | - | chr1.4:73959955-73959974 | MS.gene34039:CDS | 50.0% | |
| GTCAACTTCCCTGAAGGAGA+GGG | + | chr1.4:73954373-73954392 | None:intergenic | 50.0% | |
| GTCCATGTCAACTTCCCTGA+AGG | + | chr1.4:73954379-73954398 | None:intergenic | 50.0% | |
| TAAACTTCAAGGGAGGAGGG+AGG | + | chr1.4:73958289-73958308 | None:intergenic | 50.0% | |
| TAATGGGGAGGAGTCTCATC+TGG | - | chr1.4:73959168-73959187 | MS.gene34039:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr1.4:73958818-73958837 | MS.gene34039:intron | 50.0% | |
| TCACCAATGCTGGTGGTCTT+GGG | - | chr1.4:73956634-73956653 | MS.gene34039:intron | 50.0% | |
| TCAGGGAAGTTGACATGGAC+TGG | - | chr1.4:73954379-73954398 | MS.gene34039:CDS | 50.0% | |
| TCGGGATTGGGGATATGGTT+TGG | + | chr1.4:73957818-73957837 | None:intergenic | 50.0% | |
| TCTGCCCACAGAGAAACCAT+TGG | - | chr1.4:73957260-73957279 | MS.gene34039:CDS | 50.0% | |
| TGTCAACTTCCCTGAAGGAG+AGG | + | chr1.4:73954374-73954393 | None:intergenic | 50.0% | |
| TTCACCAATGCTGGTGGTCT+TGG | - | chr1.4:73956633-73956652 | MS.gene34039:intron | 50.0% | |
| TTCTTCTAGATCTGCCGCTG+TGG | - | chr1.4:73957988-73958007 | MS.gene34039:intron | 50.0% | |
| ! | ACAGGAGCCTTTTGCAGGTT+TGG | + | chr1.4:73959944-73959963 | None:intergenic | 50.0% |
| !! | AAAGGTGCTGGAACCTCTTG+GGG | - | chr1.4:73957671-73957690 | MS.gene34039:intron | 50.0% |
| !! | CAAAGGTGCTGGAACCTCTT+GGG | - | chr1.4:73957670-73957689 | MS.gene34039:intron | 50.0% |
| !! | GAGTTTCTGGTTATGGTGGG+TGG | - | chr1.4:73960528-73960547 | MS.gene34039:intron | 50.0% |
| !! | TACAAGTGTCGGTGTCGTGT+CGG | + | chr1.4:73958885-73958904 | None:intergenic | 50.0% |
| AACTCGCTTCCCTCTCCTTC+AGG | - | chr1.4:73954361-73954380 | MS.gene34039:CDS | 55.0% | |
| ACTCGCTTCCCTCTCCTTCA+GGG | - | chr1.4:73954362-73954381 | MS.gene34039:CDS | 55.0% | |
| CAGTGGGCATGGAGCTCTTA+AGG | - | chr1.4:73959201-73959220 | MS.gene34039:intron | 55.0% | |
| CCACTGGCCGTGAATTCAAC+CGG | - | chr1.4:73958014-73958033 | MS.gene34039:intron | 55.0% | |
| CTGTCTTGTCCTCGGGATTG+GGG | + | chr1.4:73957829-73957848 | None:intergenic | 55.0% | |
| CTTAAGAGCTCCATGCCCAC+TGG | + | chr1.4:73959203-73959222 | None:intergenic | 55.0% | |
| CTTCCCAAGACCACCAGCAT+TGG | + | chr1.4:73956640-73956659 | None:intergenic | 55.0% | |
| CTTGCTTCCGCTAGAGCTTC+TGG | - | chr1.4:73959655-73959674 | MS.gene34039:intron | 55.0% | |
| GCAAATGGGTCCCACCAGAT+TGG | + | chr1.4:73956913-73956932 | None:intergenic | 55.0% | |
| GCCCACAGAGAAACCATTGG+AGG | - | chr1.4:73957263-73957282 | MS.gene34039:CDS | 55.0% | |
| GCGATTTCTCGAGGTCTTGC+TGG | - | chr1.4:73955690-73955709 | MS.gene34039:intron | 55.0% | |
| GCTGTCTTGTCCTCGGGATT+GGG | + | chr1.4:73957830-73957849 | None:intergenic | 55.0% | |
| GTCAATGTCCGTGTCGTGTC+CGG | - | chr1.4:73958951-73958970 | MS.gene34039:intron | 55.0% | |
| GTTGATGCAGGGAATGGAGC+AGG | - | chr1.4:73957300-73957319 | MS.gene34039:CDS | 55.0% | |
| TCCGCTAGAGCTTCTGGTGT+GGG | - | chr1.4:73959661-73959680 | MS.gene34039:intron | 55.0% | |
| TGCTGTCTTGTCCTCGGGAT+TGG | + | chr1.4:73957831-73957850 | None:intergenic | 55.0% | |
| TGCTTTCGCTGGATGGTTGG+TGG | - | chr1.4:73955138-73955157 | MS.gene34039:intron | 55.0% | |
| TGTCCTCGGGATTGGGGATA+TGG | + | chr1.4:73957823-73957842 | None:intergenic | 55.0% | |
| TTCCGCTAGAGCTTCTGGTG+TGG | - | chr1.4:73959660-73959679 | MS.gene34039:intron | 55.0% | |
| ! | ACCCACACCAGAAGCTCTAG+CGG | + | chr1.4:73959665-73959684 | None:intergenic | 55.0% |
| ! | AGCTGCTTTCGCTGGATGGT+TGG | - | chr1.4:73955135-73955154 | MS.gene34039:intron | 55.0% |
| ! | CTCTAATGGATGCGGTTGCC+TGG | - | chr1.4:73955825-73955844 | MS.gene34039:intron | 55.0% |
| ! | CTTCAGCAACGGGTTCAGTG+AGG | + | chr1.4:73955108-73955127 | None:intergenic | 55.0% |
| ! | GATTAGCCGTGTCCTGGTGT+CGG | - | chr1.4:73958840-73958859 | MS.gene34039:intron | 55.0% |
| ! | GCAATAGGAGCTGCTTTCGC+TGG | - | chr1.4:73955127-73955146 | MS.gene34039:intron | 55.0% |
| ! | TAGGAGCTGCTTTCGCTGGA+TGG | - | chr1.4:73955131-73955150 | MS.gene34039:intron | 55.0% |
| ! | TGGCGGATATCCGGGAATCA+TGG | + | chr1.4:73955210-73955229 | None:intergenic | 55.0% |
| !! | CTTGATGGTGTCGAGGGAGA+GGG | - | chr1.4:73955076-73955095 | MS.gene34039:intron | 55.0% |
| !! | GATATGGCGGGTCCACGAAA+GGG | - | chr1.4:73956881-73956900 | MS.gene34039:intron | 55.0% |
| !! | GCAAAGGTGCTGGAACCTCT+TGG | - | chr1.4:73957669-73957688 | MS.gene34039:intron | 55.0% |
| !! | GTGGCTCTTGATGGTGTCGA+GGG | - | chr1.4:73955070-73955089 | MS.gene34039:intron | 55.0% |
| !! | TCTTGATGGTGTCGAGGGAG+AGG | - | chr1.4:73955075-73955094 | MS.gene34039:intron | 55.0% |
| !! | TGATATGGCGGGTCCACGAA+AGG | - | chr1.4:73956880-73956899 | MS.gene34039:intron | 55.0% |
| !! | TGTGGCTCTTGATGGTGTCG+AGG | - | chr1.4:73955069-73955088 | MS.gene34039:intron | 55.0% |
| !! | TTGATGGTGTCGAGGGAGAG+GGG | - | chr1.4:73955077-73955096 | MS.gene34039:intron | 55.0% |
| ACCAGGACACGGCTAATCCG+AGG | + | chr1.4:73958838-73958857 | None:intergenic | 60.0% | |
| ACGGCCAGTGGAATCCACAG+CGG | + | chr1.4:73958005-73958024 | None:intergenic | 60.0% | |
| ACGTGTCCGACACCAGGACA+CGG | + | chr1.4:73958849-73958868 | None:intergenic | 60.0% | |
| AGAGCTTCTGGTGTGGGTGG+AGG | - | chr1.4:73959667-73959686 | MS.gene34039:intron | 60.0% | |
| CACAGACACCGGACACGACA+CGG | + | chr1.4:73958962-73958981 | None:intergenic | 60.0% | |
| CCGGTTGAATTCACGGCCAG+TGG | + | chr1.4:73958017-73958036 | None:intergenic | 60.0% | |
| GATGCAGGGAATGGAGCAGG+TGG | - | chr1.4:73957303-73957322 | MS.gene34039:CDS | 60.0% | |
| GCTAGAGCTTCTGGTGTGGG+TGG | - | chr1.4:73959664-73959683 | MS.gene34039:intron | 60.0% | |
| TCTCGAGGTCTTGCTGGTGC+CGG | - | chr1.4:73955696-73955715 | MS.gene34039:intron | 60.0% | |
| TCTGCCGCTGTGGATTCCAC+TGG | - | chr1.4:73957998-73958017 | MS.gene34039:intron | 60.0% | |
| ! | CTGCAGCAAAAGCTGGCTCC+TGG | + | chr1.4:73959726-73959745 | None:intergenic | 60.0% |
| ! | TGATGGTGTCGAGGGAGAGG+GGG | - | chr1.4:73955078-73955097 | MS.gene34039:intron | 60.0% |
| !! | TCCTCGGATTAGCCGTGTCC+TGG | - | chr1.4:73958834-73958853 | MS.gene34039:intron | 60.0% |
| CACGACACGTGTCCGACACC+AGG | + | chr1.4:73958855-73958874 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 73954355 | 73960799 | 73954355 | ID=MS.gene34039 |
| chr1.4 | mRNA | 73954355 | 73960799 | 73954355 | ID=MS.gene34039.t1;Parent=MS.gene34039 |
| chr1.4 | exon | 73960676 | 73960799 | 73960676 | ID=MS.gene34039.t1.exon1;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73960676 | 73960799 | 73960676 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73960328 | 73960394 | 73960328 | ID=MS.gene34039.t1.exon2;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73960328 | 73960394 | 73960328 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73959914 | 73960097 | 73959914 | ID=MS.gene34039.t1.exon3;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73959914 | 73960097 | 73959914 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73959415 | 73959467 | 73959415 | ID=MS.gene34039.t1.exon4;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73959415 | 73959467 | 73959415 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73958844 | 73958932 | 73958844 | ID=MS.gene34039.t1.exon5;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73958844 | 73958932 | 73958844 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73958323 | 73958559 | 73958323 | ID=MS.gene34039.t1.exon6;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73958323 | 73958559 | 73958323 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73957819 | 73957883 | 73957819 | ID=MS.gene34039.t1.exon7;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73957819 | 73957883 | 73957819 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73957425 | 73957485 | 73957425 | ID=MS.gene34039.t1.exon8;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73957425 | 73957485 | 73957425 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73957230 | 73957347 | 73957230 | ID=MS.gene34039.t1.exon9;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73957230 | 73957347 | 73957230 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73957076 | 73957157 | 73957076 | ID=MS.gene34039.t1.exon10;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73957076 | 73957157 | 73957076 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73956908 | 73956980 | 73956908 | ID=MS.gene34039.t1.exon11;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73956908 | 73956980 | 73956908 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73956691 | 73956752 | 73956691 | ID=MS.gene34039.t1.exon12;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73956691 | 73956752 | 73956691 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73955896 | 73955991 | 73955896 | ID=MS.gene34039.t1.exon13;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73955896 | 73955991 | 73955896 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73955363 | 73955517 | 73955363 | ID=MS.gene34039.t1.exon14;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73955363 | 73955517 | 73955363 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73955178 | 73955274 | 73955178 | ID=MS.gene34039.t1.exon15;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73955178 | 73955274 | 73955178 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73954553 | 73954630 | 73954553 | ID=MS.gene34039.t1.exon16;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73954553 | 73954630 | 73954553 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| chr1.4 | exon | 73954355 | 73954462 | 73954355 | ID=MS.gene34039.t1.exon17;Parent=MS.gene34039.t1 |
| chr1.4 | CDS | 73954355 | 73954462 | 73954355 | ID=cds.MS.gene34039.t1;Parent=MS.gene34039.t1 |
| Gene Sequence |
| Protein sequence |
