Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007465.t1 | XP_003625578.2 | 98.9 | 806 | 9 | 0 | 1 | 806 | 1 | 806 | 0.00E+00 | 1552.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007465.t1 | Q9SF37 | 74.0 | 768 | 193 | 3 | 39 | 805 | 40 | 801 | 0.0e+00 | 1107.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007465.t1 | G7L1Q5 | 98.9 | 806 | 9 | 0 | 1 | 806 | 1 | 806 | 0.0e+00 | 1552.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene007465 | MS.gene57751 | PPI |
MS.gene023147 | MS.gene007465 | PPI |
MS.gene007465 | MS.gene028307 | PPI |
MS.gene22500 | MS.gene007465 | PPI |
MS.gene007465 | MS.gene07051 | PPI |
MS.gene007465 | MS.gene36485 | PPI |
MS.gene041425 | MS.gene007465 | PPI |
MS.gene007465 | MS.gene28807 | PPI |
MS.gene007465 | MS.gene35150 | PPI |
MS.gene007465 | MS.gene072702 | PPI |
MS.gene007465 | MS.gene58754 | PPI |
MS.gene007465 | MS.gene58234 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007465.t1 | MTR_7g100680 | 98.883 | 806 | 9 | 0 | 1 | 806 | 1 | 806 | 0.0 | 1653 |
MS.gene007465.t1 | MTR_7g061220 | 98.611 | 216 | 3 | 0 | 576 | 791 | 403 | 618 | 2.81e-144 | 438 |
MS.gene007465.t1 | MTR_2g437540 | 30.575 | 713 | 372 | 23 | 27 | 705 | 25 | 648 | 4.30e-93 | 310 |
MS.gene007465.t1 | MTR_4g071090 | 33.441 | 619 | 336 | 17 | 113 | 718 | 202 | 757 | 6.67e-92 | 307 |
MS.gene007465.t1 | MTR_8g090000 | 31.086 | 608 | 328 | 15 | 129 | 705 | 106 | 653 | 5.86e-90 | 302 |
MS.gene007465.t1 | MTR_4g096700 | 34.570 | 593 | 312 | 17 | 144 | 712 | 109 | 649 | 7.26e-90 | 300 |
MS.gene007465.t1 | MTR_4g122270 | 29.955 | 661 | 373 | 21 | 67 | 705 | 231 | 823 | 9.14e-87 | 295 |
MS.gene007465.t1 | MTR_4g116870 | 32.724 | 602 | 319 | 16 | 124 | 707 | 118 | 651 | 1.65e-81 | 276 |
MS.gene007465.t1 | MTR_7g109480 | 32.815 | 579 | 303 | 15 | 143 | 712 | 145 | 646 | 4.73e-81 | 275 |
MS.gene007465.t1 | MTR_2g009190 | 31.155 | 658 | 330 | 23 | 87 | 705 | 42 | 615 | 2.08e-73 | 253 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene007465.t1 | AT3G09660 | 73.316 | 757 | 192 | 3 | 37 | 792 | 38 | 785 | 0.0 | 1150 |
MS.gene007465.t1 | AT3G09660 | 73.316 | 757 | 195 | 3 | 37 | 792 | 38 | 788 | 0.0 | 1150 |
MS.gene007465.t1 | AT3G09660 | 72.803 | 717 | 188 | 3 | 37 | 752 | 38 | 748 | 0.0 | 1078 |
MS.gene007465.t1 | AT2G16440 | 34.385 | 602 | 321 | 16 | 129 | 718 | 223 | 762 | 4.61e-94 | 313 |
MS.gene007465.t1 | AT5G44635 | 32.295 | 610 | 319 | 16 | 129 | 705 | 107 | 655 | 4.34e-92 | 307 |
MS.gene007465.t1 | AT5G44635 | 32.295 | 610 | 319 | 16 | 129 | 705 | 107 | 655 | 5.69e-92 | 308 |
MS.gene007465.t1 | AT1G44900 | 30.594 | 657 | 376 | 19 | 67 | 705 | 233 | 827 | 8.83e-90 | 303 |
MS.gene007465.t1 | AT1G44900 | 30.594 | 657 | 376 | 19 | 67 | 705 | 231 | 825 | 9.55e-90 | 303 |
MS.gene007465.t1 | AT5G46280 | 33.220 | 590 | 328 | 14 | 140 | 712 | 101 | 641 | 4.89e-87 | 290 |
MS.gene007465.t1 | AT5G46280 | 33.220 | 590 | 328 | 14 | 140 | 712 | 101 | 641 | 3.05e-86 | 290 |
MS.gene007465.t1 | AT5G46280 | 33.627 | 568 | 311 | 14 | 140 | 690 | 101 | 619 | 2.41e-84 | 281 |
MS.gene007465.t1 | AT4G02060 | 31.918 | 636 | 321 | 19 | 143 | 749 | 143 | 695 | 1.40e-83 | 282 |
MS.gene007465.t1 | AT4G02060 | 31.918 | 636 | 321 | 19 | 143 | 749 | 143 | 695 | 1.40e-83 | 282 |
MS.gene007465.t1 | AT2G07690 | 33.333 | 588 | 303 | 15 | 138 | 707 | 129 | 645 | 1.84e-82 | 279 |
MS.gene007465.t1 | AT2G07690 | 33.449 | 577 | 295 | 15 | 149 | 707 | 138 | 643 | 7.16e-81 | 275 |
MS.gene007465.t1 | AT2G14050 | 32.363 | 584 | 307 | 17 | 133 | 705 | 110 | 616 | 5.50e-77 | 262 |
MS.gene007465.t1 | AT2G14050 | 32.363 | 584 | 307 | 17 | 133 | 705 | 110 | 616 | 9.58e-77 | 261 |
MS.gene007465.t1 | AT5G46280 | 32.879 | 514 | 282 | 12 | 140 | 639 | 101 | 565 | 5.31e-73 | 249 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGAATTCATTCGAGTTAA+TGG | 0.108793 | 7.2:+11489338 | MS.gene007465:CDS |
CCAGCTCCGATTGCTTATTA+AGG | 0.193745 | 7.2:-11496181 | None:intergenic |
TTCAGTGCAATCATGGTTTC+AGG | 0.209947 | 7.2:-11490111 | None:intergenic |
GGGATAACTCTATCATTATT+TGG | 0.224721 | 7.2:+11492264 | MS.gene007465:CDS |
GAGCATGGGGTTGTTGATTT+TGG | 0.227811 | 7.2:+11496107 | MS.gene007465:CDS |
TCCAGCTGCCTTGCTGTTAT+AGG | 0.258403 | 7.2:-11495227 | None:intergenic |
TTCCTTGAAAGTACCTGATA+TGG | 0.261728 | 7.2:+11496339 | MS.gene007465:CDS |
GGAGATGTGGTGACGGTTAC+TGG | 0.270140 | 7.2:+11490709 | MS.gene007465:CDS |
TCTATATGCCCTTCCATCTA+TGG | 0.290785 | 7.2:+11491727 | MS.gene007465:CDS |
GGACAAGCCTGATGAACTTT+TGG | 0.293696 | 7.2:+11493964 | MS.gene007465:CDS |
TATGGACATGAGCTTGTTAA+AGG | 0.300590 | 7.2:+11491745 | MS.gene007465:CDS |
TCTAACTATACAGGCTTTAC+TGG | 0.311193 | 7.2:+11493390 | MS.gene007465:intron |
TTGCAGCTTCATGCTGGGTC+CGG | 0.318435 | 7.2:+11494702 | MS.gene007465:intron |
ATTAACAATTACATGGATAT+TGG | 0.321083 | 7.2:+11490745 | MS.gene007465:CDS |
CTCGTTGATTCATGCATTCC+TGG | 0.334719 | 7.2:+11490688 | MS.gene007465:CDS |
GAATGTTGAAGGCGTAGATT+TGG | 0.343931 | 7.2:+11494898 | MS.gene007465:CDS |
TATGATATCTGCCGCGGGCT+TGG | 0.355308 | 7.2:-11495153 | None:intergenic |
AGCTACTGTGAGGCCAGCTT+TGG | 0.357574 | 7.2:-11492621 | None:intergenic |
CAGCTCCGATTGCTTATTAA+GGG | 0.360222 | 7.2:-11496180 | None:intergenic |
CTGTGACTTTGAATTCACTA+TGG | 0.363793 | 7.2:-11491557 | None:intergenic |
CATCGCACCTGGTATGTCTT+TGG | 0.366580 | 7.2:-11496412 | None:intergenic |
GCATTCTATGGATCAGAATA+AGG | 0.366762 | 7.2:+11492299 | MS.gene007465:CDS |
TGTTTCTTGCAGCTTCATGC+TGG | 0.368557 | 7.2:+11494696 | MS.gene007465:intron |
TCGATGAAAGTATCCATATC+AGG | 0.376038 | 7.2:-11496352 | None:intergenic |
CATTAACTCGAATGAATTCA+TGG | 0.376829 | 7.2:-11489337 | None:intergenic |
TACTTATAATGACCACCAAC+AGG | 0.377981 | 7.2:-11493502 | None:intergenic |
CCATTCAAATTGCAAGTTGA+TGG | 0.379274 | 7.2:-11490413 | None:intergenic |
CGCTTGTCCAAAAGTTCATC+AGG | 0.385535 | 7.2:-11493971 | None:intergenic |
ATACCTGAGAAACGATGTTT+TGG | 0.390987 | 7.2:-11489452 | None:intergenic |
CATCAATATATTTATCATAC+AGG | 0.392077 | 7.2:-11496085 | None:intergenic |
TTACAGGTGAGAAATGAATA+TGG | 0.393052 | 7.2:+11489811 | MS.gene007465:intron |
CCTGACGGTGCTGGCTTTCA+CGG | 0.395426 | 7.2:-11490306 | None:intergenic |
AGCCGAAGCTCGAGCTCGGC+TGG | 0.401333 | 7.2:+11495265 | MS.gene007465:CDS |
GATCTGGTTCTTTAATTTCA+AGG | 0.402786 | 7.2:+11494927 | MS.gene007465:CDS |
CGGCGTACGGAGGCATTCTA+TGG | 0.403727 | 7.2:+11492287 | MS.gene007465:CDS |
GTAGATTTGGGTGTAGGATC+TGG | 0.408575 | 7.2:+11494911 | MS.gene007465:CDS |
TGCAGCTTCATGCTGGGTCC+GGG | 0.413367 | 7.2:+11494703 | MS.gene007465:intron |
ACAGAGCAGAGGATCCGATA+TGG | 0.414379 | 7.2:+11489300 | MS.gene007465:CDS |
CGAAGAAGTTGACCAGGTAA+TGG | 0.417048 | 7.2:-11494986 | None:intergenic |
AACAAGCTCATGTCCATAGA+TGG | 0.417259 | 7.2:-11491740 | None:intergenic |
AGAAGAAGTGAGGTTGAGCC+AGG | 0.418029 | 7.2:-11489400 | None:intergenic |
CAGCTCAGTTGGTCTAGCTT+TGG | 0.426463 | 7.2:-11491611 | None:intergenic |
TAAAATGACCTCAGAGCATC+AGG | 0.427495 | 7.2:+11493295 | MS.gene007465:CDS |
GATATTCATGTCATAGTTGT+AGG | 0.436924 | 7.2:+11492336 | MS.gene007465:CDS |
AAATATACAGTCTGGCTGAT+AGG | 0.441346 | 7.2:+11496314 | MS.gene007465:CDS |
CTGCTGCTGCTTGTAACAAC+TGG | 0.441826 | 7.2:-11492556 | None:intergenic |
AGGATTTGGCGAAATAAATC+TGG | 0.443322 | 7.2:-11491700 | None:intergenic |
AATGTTGAAGGCGTAGATTT+GGG | 0.445445 | 7.2:+11494899 | MS.gene007465:CDS |
AAAGCATAGTCATTTGTCAT+AGG | 0.449736 | 7.2:-11492656 | None:intergenic |
CCATCAACTTGCAATTTGAA+TGG | 0.452389 | 7.2:+11490413 | MS.gene007465:CDS |
GGCATATAGAGTGAAGGATT+TGG | 0.454611 | 7.2:-11491714 | None:intergenic |
CATTCAAATTGCAAGTTGAT+GGG | 0.455098 | 7.2:-11490412 | None:intergenic |
TCCTATAACAGCAAGGCAGC+TGG | 0.455519 | 7.2:+11495226 | MS.gene007465:CDS |
TATGAAAATTAAATCAAAAC+GGG | 0.458966 | 7.2:-11493936 | None:intergenic |
TGAATTCATGGAAAGTGATT+CGG | 0.459805 | 7.2:-11489325 | None:intergenic |
GTTTCTTGCAGCTTCATGCT+GGG | 0.461288 | 7.2:+11494697 | MS.gene007465:intron |
TTTCTAGGTGATCCTGGTCT+AGG | 0.462228 | 7.2:+11492527 | MS.gene007465:intron |
TAAATTCTTCAGTGCAATCA+TGG | 0.466389 | 7.2:-11490118 | None:intergenic |
TTCTATTGCAAAGGCGGGAT+TGG | 0.467185 | 7.2:+11493435 | MS.gene007465:CDS |
AGGCCAAAACATCGTTTCTC+AGG | 0.468798 | 7.2:+11489449 | MS.gene007465:CDS |
CCGTGAAAGCCAGCACCGTC+AGG | 0.472216 | 7.2:+11490306 | MS.gene007465:CDS |
CACAAGAGGCCTGACGGTGC+TGG | 0.474149 | 7.2:-11490315 | None:intergenic |
TATCATTATTTGGCGGCGTA+CGG | 0.481378 | 7.2:+11492274 | MS.gene007465:CDS |
CCTGATAGGTGCTATGGTGC+TGG | 0.483705 | 7.2:+11493238 | MS.gene007465:intron |
ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 7.2:+11496370 | MS.gene007465:CDS |
ATATGAAAATTAAATCAAAA+CGG | 0.484820 | 7.2:-11493937 | None:intergenic |
GATACAAATAGTAAAATCCT+TGG | 0.485029 | 7.2:-11491522 | None:intergenic |
GATAAATATATTGATGAGCA+TGG | 0.490221 | 7.2:+11496092 | MS.gene007465:CDS |
TGAGAGTCTTGTGAATCATC+AGG | 0.495946 | 7.2:-11491586 | None:intergenic |
TCTGCATCACAGAATGTTGA+AGG | 0.496444 | 7.2:+11494887 | MS.gene007465:CDS |
TGGTTTCAGGACAGTTATGA+AGG | 0.500816 | 7.2:-11490098 | None:intergenic |
ATCCATATCAGGTACTTTCA+AGG | 0.502711 | 7.2:-11496341 | None:intergenic |
ACGGTTACTGGAATTATTAG+AGG | 0.502723 | 7.2:+11490721 | MS.gene007465:CDS |
ATAAATATATTGATGAGCAT+GGG | 0.502837 | 7.2:+11496093 | MS.gene007465:CDS |
GTCTTGTGAATCATCAGGTA+TGG | 0.506063 | 7.2:-11491581 | None:intergenic |
AAATGCCCTTAATAAGCAAT+CGG | 0.507539 | 7.2:+11496175 | MS.gene007465:CDS |
TAGAGGAATTAACAATTACA+TGG | 0.507609 | 7.2:+11490738 | MS.gene007465:CDS |
GAGCCAGTCGTCTAGGTCAA+GGG | 0.508608 | 7.2:+11496634 | MS.gene007465:CDS |
AACAAATCAAACAGCTCAGT+TGG | 0.515399 | 7.2:-11491622 | None:intergenic |
AACAATTACATGGATATTGG+AGG | 0.515600 | 7.2:+11490748 | MS.gene007465:CDS |
CCTTAATAAGCAATCGGAGC+TGG | 0.515942 | 7.2:+11496181 | MS.gene007465:CDS |
GCCTATGGAAGAAGAAAAGA+AGG | 0.516013 | 7.2:-11489430 | None:intergenic |
TGGGTCCGGGCAACACTCAC+AGG | 0.519091 | 7.2:+11494716 | MS.gene007465:CDS |
GGTAACGCCACAACCAAAGC+TGG | 0.525016 | 7.2:+11492608 | MS.gene007465:CDS |
GCATTTCCTGATAGGTGCTA+TGG | 0.525346 | 7.2:+11493232 | MS.gene007465:intron |
GAGAGTAGAAATAACGGCTC+AGG | 0.525362 | 7.2:+11495292 | MS.gene007465:CDS |
AGATGCCTGTGAGTGTTGCC+CGG | 0.525723 | 7.2:-11494721 | None:intergenic |
GTCCAGCCGAGCTCGAGCTT+CGG | 0.526288 | 7.2:-11495267 | None:intergenic |
TGTGAGGCCAGCTTTGGTTG+TGG | 0.530730 | 7.2:-11492615 | None:intergenic |
AAACTCATTTCTACCACAAG+AGG | 0.532373 | 7.2:-11490329 | None:intergenic |
GATCACAATGTTTCTGCTGA+TGG | 0.533641 | 7.2:+11495200 | MS.gene007465:CDS |
GGAGCCAGTCGTCTAGGTCA+AGG | 0.534034 | 7.2:+11496633 | MS.gene007465:CDS |
CATGAGTGTTGCCGTTCATA+CGG | 0.534956 | 7.2:+11489936 | MS.gene007465:CDS |
GGCAGCTGGAAAGTCTAGTA+AGG | 0.538296 | 7.2:+11495240 | MS.gene007465:CDS |
GAAGGCGTAGATTTGGGTGT+AGG | 0.539828 | 7.2:+11494905 | MS.gene007465:CDS |
AGGACGAGTGCCTCGAACAG+TGG | 0.539875 | 7.2:+11490645 | MS.gene007465:CDS |
GTGAAATTTGCAGAGGAGCA+CGG | 0.541354 | 7.2:+11491676 | MS.gene007465:CDS |
TGTGTTTCTATTGCAAAGGC+GGG | 0.541611 | 7.2:+11493430 | MS.gene007465:CDS |
CAAGGAGTTATGTCTTTCCC+AGG | 0.542533 | 7.2:+11495026 | MS.gene007465:CDS |
AGCTGCTAAGACTGAAGTAC+GGG | 0.545727 | 7.2:-11493473 | None:intergenic |
AAAGTGATTCGGAACCATAT+CGG | 0.550726 | 7.2:-11489314 | None:intergenic |
CAGCTGCTAAGACTGAAGTA+CGG | 0.551603 | 7.2:-11493474 | None:intergenic |
GCAGCTGCAAACCCTGTTGG+TGG | 0.552385 | 7.2:+11493490 | MS.gene007465:CDS |
ACAGGCTTTACTGGAGGCAA+TGG | 0.560762 | 7.2:+11493399 | MS.gene007465:intron |
GCAAATACATTGCTTATGCA+AGG | 0.561719 | 7.2:+11495008 | MS.gene007465:CDS |
GGCTAGCCGAAGCTCGAGCT+CGG | 0.562239 | 7.2:+11495261 | MS.gene007465:CDS |
AGTTCACATTCCACTGTTCG+AGG | 0.562723 | 7.2:-11490655 | None:intergenic |
GTAACCGTCACCACATCTCC+AGG | 0.563167 | 7.2:-11490706 | None:intergenic |
TCTTCACTGTTGAACAAACC+TGG | 0.565363 | 7.2:+11489382 | MS.gene007465:CDS |
TCAACAGTGAAGAGTTGTTG+AGG | 0.566173 | 7.2:-11489372 | None:intergenic |
TCAGAATAAGGTTCCTGTGA+GGG | 0.567443 | 7.2:+11492311 | MS.gene007465:CDS |
AGCTCATGTCCATAGATGGA+AGG | 0.568333 | 7.2:-11491736 | None:intergenic |
ACTCACGGAGCCAGTCGTCT+AGG | 0.568472 | 7.2:+11496627 | MS.gene007465:CDS |
CATTATTTGGCGGCGTACGG+AGG | 0.568523 | 7.2:+11492277 | MS.gene007465:CDS |
ATTCAAATTGCAAGTTGATG+GGG | 0.568890 | 7.2:-11490411 | None:intergenic |
AATTTAAAAGCAGCTTACAT+TGG | 0.570272 | 7.2:+11490135 | MS.gene007465:CDS |
AGCCCCTTGACCTAGACGAC+TGG | 0.570287 | 7.2:-11496637 | None:intergenic |
ATAACTCTATCATTATTTGG+CGG | 0.578321 | 7.2:+11492267 | MS.gene007465:CDS |
CAGAATAAGGTTCCTGTGAG+GGG | 0.579252 | 7.2:+11492312 | MS.gene007465:CDS |
TATTATCCTCTTCGTACTCA+CGG | 0.583721 | 7.2:+11496612 | MS.gene007465:CDS |
ACAGTGTGTTTCTATTGCAA+AGG | 0.584931 | 7.2:+11493426 | MS.gene007465:CDS |
TTCAAATTGCAAGTTGATGG+GGG | 0.585102 | 7.2:-11490410 | None:intergenic |
GCTATGGTGCTGGCTGACAG+TGG | 0.585494 | 7.2:+11493248 | MS.gene007465:CDS |
CGAAAACGGAATGCACGGAA+CGG | 0.587242 | 7.2:+11489266 | None:intergenic |
TTAGCAGCTGCAAACCCTGT+TGG | 0.589249 | 7.2:+11493487 | MS.gene007465:CDS |
ATCAATATATTTATCATACA+GGG | 0.591073 | 7.2:-11496084 | None:intergenic |
GTGTGTTTCTATTGCAAAGG+CGG | 0.592077 | 7.2:+11493429 | MS.gene007465:CDS |
GGACTTGAGAGTAGAAATAA+CGG | 0.594417 | 7.2:+11495286 | MS.gene007465:CDS |
TGGAAGGGCATATAGAGTGA+AGG | 0.595503 | 7.2:-11491720 | None:intergenic |
AACTATACAGGCTTTACTGG+AGG | 0.596813 | 7.2:+11493393 | MS.gene007465:intron |
TTCTACCACAAGAGGCCTGA+CGG | 0.602191 | 7.2:-11490321 | None:intergenic |
ACATGAATATCTCCCCTCAC+AGG | 0.603165 | 7.2:-11492324 | None:intergenic |
AATTACATGGATATTGGAGG+AGG | 0.603394 | 7.2:+11490751 | MS.gene007465:CDS |
GCTCATGTCCATAGATGGAA+GGG | 0.603395 | 7.2:-11491735 | None:intergenic |
CTTCAAACATACCGTATGAA+CGG | 0.606375 | 7.2:-11489947 | None:intergenic |
GTTTGAGCAGTAGATCGCAA+TGG | 0.610784 | 7.2:-11490458 | None:intergenic |
ATTTGTTGTGAAATTTGCAG+AGG | 0.612399 | 7.2:+11491669 | MS.gene007465:CDS |
TAAATGGGAGAGTGACAAGC+CGG | 0.613315 | 7.2:+11490050 | MS.gene007465:CDS |
AACTGGCTCTTACCTAGACC+AGG | 0.613927 | 7.2:-11492539 | None:intergenic |
AAACGGAATGCACGGAACGG+CGG | 0.614979 | 7.2:+11489269 | None:intergenic |
GCAGAAGCTCTTGAATCAGA+AGG | 0.616635 | 7.2:-11494869 | None:intergenic |
AAACATGAAGATCACGAGGA+AGG | 0.616650 | 7.2:+11490625 | MS.gene007465:CDS |
AGCCAGTCGTCTAGGTCAAG+GGG | 0.618083 | 7.2:+11496635 | MS.gene007465:CDS |
CCTCACAGTAGCTGTAGTGA+AGG | 0.619903 | 7.2:+11492631 | MS.gene007465:CDS |
CAGCACCGTCAGGCCTCTTG+TGG | 0.622158 | 7.2:+11490316 | MS.gene007465:CDS |
GACAAGCTTGTCTCAGTGCG+TGG | 0.626282 | 7.2:+11490278 | MS.gene007465:intron |
ATTACACGTATATTTCCCGA+TGG | 0.635140 | 7.2:+11490377 | MS.gene007465:CDS |
AATAACGGCTCAGGATGCAA+TGG | 0.635142 | 7.2:+11495301 | MS.gene007465:CDS |
TAAGCCGAAAACGGAATGCA+CGG | 0.635569 | 7.2:+11489261 | None:intergenic |
TTCATGCATTCCTGGAGATG+TGG | 0.637385 | 7.2:+11490696 | MS.gene007465:CDS |
AATAAGGATGTCCAAGCCCG+CGG | 0.637718 | 7.2:+11495142 | MS.gene007465:intron |
CCACGTGGTATCTATGTCTG+TGG | 0.638262 | 7.2:+11492587 | MS.gene007465:CDS |
GGATGTCGTTGAAATCATGA+AGG | 0.640932 | 7.2:+11496058 | MS.gene007465:intron |
TATTTGCGAAGAAGTTGACC+AGG | 0.643129 | 7.2:-11494992 | None:intergenic |
AAGTCAAAGAACAGAAACCA+AGG | 0.649686 | 7.2:+11491505 | MS.gene007465:CDS |
ACTTATAATGACCACCAACA+GGG | 0.656491 | 7.2:-11493501 | None:intergenic |
CGGAAGAGATGACAGAGCAG+AGG | 0.656552 | 7.2:+11489289 | MS.gene007465:CDS |
GAAGCTCTTGAATCAGAAGG+TGG | 0.658101 | 7.2:-11494866 | None:intergenic |
ATGGTACTCCTATAACAGCA+AGG | 0.669181 | 7.2:+11495219 | MS.gene007465:CDS |
AGAACAAACCTGATGCTCTG+AGG | 0.677307 | 7.2:-11493303 | None:intergenic |
TAAATATATTGATGAGCATG+GGG | 0.677887 | 7.2:+11496094 | MS.gene007465:CDS |
CTGGCTCCGTGAGTACGAAG+AGG | 0.680237 | 7.2:-11496618 | None:intergenic |
AAAAGGACCAAAGACATACC+AGG | 0.683042 | 7.2:+11496405 | MS.gene007465:CDS |
ATCAGAATAAGGTTCCTGTG+AGG | 0.686718 | 7.2:+11492310 | MS.gene007465:CDS |
CATTCCTGGAGATGTGGTGA+CGG | 0.688405 | 7.2:+11490702 | MS.gene007465:CDS |
GCAGCAGCTGTTTCTCCACG+TGG | 0.713879 | 7.2:+11492572 | MS.gene007465:CDS |
CCACAGACATAGATACCACG+TGG | 0.717137 | 7.2:-11492587 | None:intergenic |
ATTAAAACATGAAGATCACG+AGG | 0.723521 | 7.2:+11490621 | MS.gene007465:CDS |
CCTTCACTACAGCTACTGTG+AGG | 0.742828 | 7.2:-11492631 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 11489276 | 11496661 | 11489276 | ID=MS.gene007465 |
chr7.2 | mRNA | 11489276 | 11496661 | 11489276 | ID=MS.gene007465.t1;Parent=MS.gene007465 |
chr7.2 | exon | 11489276 | 11489470 | 11489276 | ID=MS.gene007465.t1.exon1;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11489276 | 11489470 | 11489276 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11489817 | 11489957 | 11489817 | ID=MS.gene007465.t1.exon2;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11489817 | 11489957 | 11489817 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11490039 | 11490156 | 11490039 | ID=MS.gene007465.t1.exon3;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11490039 | 11490156 | 11490039 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11490279 | 11490501 | 11490279 | ID=MS.gene007465.t1.exon4;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11490279 | 11490501 | 11490279 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11490609 | 11490772 | 11490609 | ID=MS.gene007465.t1.exon5;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11490609 | 11490772 | 11490609 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11491503 | 11491766 | 11491503 | ID=MS.gene007465.t1.exon6;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11491503 | 11491766 | 11491503 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11492262 | 11492357 | 11492262 | ID=MS.gene007465.t1.exon7;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11492262 | 11492357 | 11492262 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11492534 | 11492686 | 11492534 | ID=MS.gene007465.t1.exon8;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11492534 | 11492686 | 11492534 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11493246 | 11493316 | 11493246 | ID=MS.gene007465.t1.exon9;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11493246 | 11493316 | 11493246 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11493403 | 11493521 | 11493403 | ID=MS.gene007465.t1.exon10;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11493403 | 11493521 | 11493403 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11493886 | 11494015 | 11493886 | ID=MS.gene007465.t1.exon11;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11493886 | 11494015 | 11493886 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11494708 | 11494759 | 11494708 | ID=MS.gene007465.t1.exon12;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11494708 | 11494759 | 11494708 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11494864 | 11495047 | 11494864 | ID=MS.gene007465.t1.exon13;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11494864 | 11495047 | 11494864 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11495148 | 11495322 | 11495148 | ID=MS.gene007465.t1.exon14;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11495148 | 11495322 | 11495148 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11496059 | 11496229 | 11496059 | ID=MS.gene007465.t1.exon15;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11496059 | 11496229 | 11496059 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11496313 | 11496426 | 11496313 | ID=MS.gene007465.t1.exon16;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11496313 | 11496426 | 11496313 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
chr7.2 | exon | 11496611 | 11496661 | 11496611 | ID=MS.gene007465.t1.exon17;Parent=MS.gene007465.t1 |
chr7.2 | CDS | 11496611 | 11496661 | 11496611 | ID=cds.MS.gene007465.t1;Parent=MS.gene007465.t1 |
Gene Sequence |
Protein sequence |