Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36485.t1 | XP_003608493.1 | 99.1 | 773 | 7 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1436 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36485.t1 | Q9FL33 | 76.0 | 786 | 165 | 9 | 1 | 772 | 1 | 776 | 0.0e+00 | 1089.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36485.t1 | G7JDY9 | 99.1 | 773 | 7 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1436.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene36485 | 0.879593 | 1.10E-69 | -1.69E-46 |
| MS.gene049596 | MS.gene36485 | 0.830523 | 2.80E-55 | -1.69E-46 |
| MS.gene049622 | MS.gene36485 | 0.818775 | 1.64E-52 | -1.69E-46 |
| MS.gene049660 | MS.gene36485 | 0.815321 | 9.82E-52 | -1.69E-46 |
| MS.gene04985 | MS.gene36485 | 0.844423 | 7.63E-59 | -1.69E-46 |
| MS.gene049989 | MS.gene36485 | 0.911105 | 8.86E-83 | -1.69E-46 |
| MS.gene050297 | MS.gene36485 | 0.886217 | 4.14E-72 | -1.69E-46 |
| MS.gene05054 | MS.gene36485 | 0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene050648 | MS.gene36485 | 0.857389 | 1.69E-62 | -1.69E-46 |
| MS.gene051067 | MS.gene36485 | 0.804722 | 1.88E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene36485 | 0.834574 | 2.77E-56 | -1.69E-46 |
| MS.gene05124 | MS.gene36485 | 0.824937 | 6.16E-54 | -1.69E-46 |
| MS.gene051263 | MS.gene36485 | 0.837008 | 6.69E-57 | -1.69E-46 |
| MS.gene051423 | MS.gene36485 | 0.836561 | 8.70E-57 | -1.69E-46 |
| MS.gene051629 | MS.gene36485 | 0.84994 | 2.34E-60 | -1.69E-46 |
| MS.gene051742 | MS.gene36485 | 0.824156 | 9.40E-54 | -1.69E-46 |
| MS.gene051816 | MS.gene36485 | 0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene051955 | MS.gene36485 | 0.833774 | 4.40E-56 | -1.69E-46 |
| MS.gene052143 | MS.gene36485 | 0.829039 | 6.43E-55 | -1.69E-46 |
| MS.gene052308 | MS.gene36485 | 0.844342 | 8.02E-59 | -1.69E-46 |
| MS.gene052367 | MS.gene36485 | 0.893593 | 5.44E-75 | -1.69E-46 |
| MS.gene053173 | MS.gene36485 | 0.879771 | 9.49E-70 | -1.69E-46 |
| MS.gene053348 | MS.gene36485 | 0.884624 | 1.64E-71 | -1.69E-46 |
| MS.gene053416 | MS.gene36485 | 0.895462 | 9.37E-76 | -1.69E-46 |
| MS.gene053417 | MS.gene36485 | 0.893227 | 7.65E-75 | -1.69E-46 |
| MS.gene05369 | MS.gene36485 | 0.841257 | 5.30E-58 | -1.69E-46 |
| MS.gene053929 | MS.gene36485 | 0.825986 | 3.48E-54 | -1.69E-46 |
| MS.gene054551 | MS.gene36485 | 0.88131 | 2.67E-70 | -1.69E-46 |
| MS.gene054552 | MS.gene36485 | 0.830601 | 2.68E-55 | -1.69E-46 |
| MS.gene054593 | MS.gene36485 | 0.866671 | 2.40E-65 | -1.69E-46 |
| MS.gene054643 | MS.gene36485 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene36485 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene055308 | MS.gene36485 | 0.891033 | 5.75E-74 | -1.69E-46 |
| MS.gene055411 | MS.gene36485 | 0.835137 | 2.00E-56 | -1.69E-46 |
| MS.gene055578 | MS.gene36485 | 0.874502 | 6.42E-68 | -1.69E-46 |
| MS.gene055579 | MS.gene36485 | 0.814157 | 1.78E-51 | -1.69E-46 |
| MS.gene055957 | MS.gene36485 | 0.892052 | 2.26E-74 | -1.69E-46 |
| MS.gene056041 | MS.gene36485 | 0.918623 | 1.24E-86 | -1.69E-46 |
| MS.gene056042 | MS.gene36485 | 0.846766 | 1.77E-59 | -1.69E-46 |
| MS.gene056228 | MS.gene36485 | 0.807546 | 4.80E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene36485 | 0.884824 | 1.38E-71 | -1.69E-46 |
| MS.gene056520 | MS.gene36485 | 0.816757 | 4.69E-52 | -1.69E-46 |
| MS.gene056526 | MS.gene36485 | 0.883646 | 3.76E-71 | -1.69E-46 |
| MS.gene056528 | MS.gene36485 | 0.835052 | 2.10E-56 | -1.69E-46 |
| MS.gene05732 | MS.gene36485 | 0.801668 | 8.08E-49 | -1.69E-46 |
| MS.gene057357 | MS.gene36485 | 0.800833 | 1.20E-48 | -1.69E-46 |
| MS.gene057358 | MS.gene36485 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene36485 | 0.868837 | 4.85E-66 | -1.69E-46 |
| MS.gene057483 | MS.gene36485 | 0.827939 | 1.19E-54 | -1.69E-46 |
| MS.gene058128 | MS.gene36485 | 0.821087 | 4.86E-53 | -1.69E-46 |
| MS.gene058196 | MS.gene36485 | 0.863833 | 1.88E-64 | -1.69E-46 |
| MS.gene058197 | MS.gene36485 | 0.853612 | 2.13E-61 | -1.69E-46 |
| MS.gene058198 | MS.gene36485 | 0.852986 | 3.22E-61 | -1.69E-46 |
| MS.gene058478 | MS.gene36485 | 0.813191 | 2.90E-51 | -1.69E-46 |
| MS.gene058818 | MS.gene36485 | 0.839188 | 1.84E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene36485 | 0.8494 | 3.31E-60 | -1.69E-46 |
| MS.gene058828 | MS.gene36485 | 0.820417 | 6.94E-53 | -1.69E-46 |
| MS.gene058844 | MS.gene36485 | 0.823746 | 1.17E-53 | -1.69E-46 |
| MS.gene058849 | MS.gene36485 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene36485 | 0.844755 | 6.21E-59 | -1.69E-46 |
| MS.gene059300 | MS.gene36485 | 0.881657 | 2.00E-70 | -1.69E-46 |
| MS.gene059553 | MS.gene36485 | 0.877801 | 4.69E-69 | -1.69E-46 |
| MS.gene060473 | MS.gene36485 | 0.909112 | 8.16E-82 | -1.69E-46 |
| MS.gene060565 | MS.gene36485 | 0.9044 | 1.28E-79 | -1.69E-46 |
| MS.gene06057 | MS.gene36485 | 0.867803 | 1.05E-65 | -1.69E-46 |
| MS.gene06064 | MS.gene36485 | 0.802781 | 4.77E-49 | -1.69E-46 |
| MS.gene06093 | MS.gene36485 | 0.902815 | 6.59E-79 | -1.69E-46 |
| MS.gene061099 | MS.gene36485 | 0.859931 | 2.94E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene36485 | 0.926903 | 2.47E-91 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36485.t1 | MTR_4g096700 | 99.483 | 773 | 4 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1583 |
| MS.gene36485.t1 | MTR_7g109480 | 35.103 | 678 | 351 | 13 | 9 | 643 | 12 | 643 | 2.76e-116 | 368 |
| MS.gene36485.t1 | MTR_4g071090 | 33.538 | 650 | 355 | 12 | 28 | 653 | 155 | 751 | 1.13e-108 | 351 |
| MS.gene36485.t1 | MTR_4g122270 | 34.837 | 643 | 377 | 12 | 5 | 638 | 210 | 819 | 4.25e-101 | 333 |
| MS.gene36485.t1 | MTR_8g090000 | 31.072 | 737 | 391 | 17 | 28 | 707 | 37 | 713 | 3.48e-99 | 326 |
| MS.gene36485.t1 | MTR_4g116870 | 34.331 | 635 | 339 | 15 | 38 | 641 | 61 | 648 | 2.06e-96 | 316 |
| MS.gene36485.t1 | MTR_2g437540 | 30.055 | 722 | 392 | 15 | 14 | 679 | 20 | 684 | 8.62e-95 | 313 |
| MS.gene36485.t1 | MTR_7g100680 | 34.401 | 593 | 313 | 17 | 109 | 649 | 144 | 712 | 6.96e-90 | 300 |
| MS.gene36485.t1 | MTR_2g009190 | 32.386 | 528 | 301 | 11 | 117 | 635 | 128 | 608 | 7.83e-70 | 242 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36485.t1 | AT5G46280 | 74.427 | 786 | 177 | 9 | 1 | 772 | 1 | 776 | 0.0 | 1179 |
| MS.gene36485.t1 | AT5G46280 | 81.498 | 654 | 109 | 6 | 1 | 652 | 1 | 644 | 0.0 | 1099 |
| MS.gene36485.t1 | AT5G46280 | 81.876 | 629 | 102 | 6 | 1 | 627 | 1 | 619 | 0.0 | 1058 |
| MS.gene36485.t1 | AT5G46280 | 81.724 | 580 | 94 | 6 | 1 | 578 | 1 | 570 | 0.0 | 977 |
| MS.gene36485.t1 | AT4G02060 | 36.527 | 668 | 331 | 14 | 17 | 641 | 19 | 636 | 3.44e-121 | 380 |
| MS.gene36485.t1 | AT4G02060 | 36.527 | 668 | 331 | 14 | 17 | 641 | 19 | 636 | 3.44e-121 | 380 |
| MS.gene36485.t1 | AT2G16440 | 34.709 | 654 | 357 | 10 | 11 | 642 | 143 | 748 | 8.53e-111 | 357 |
| MS.gene36485.t1 | AT2G07690 | 35.994 | 639 | 326 | 16 | 33 | 639 | 53 | 640 | 8.01e-105 | 338 |
| MS.gene36485.t1 | AT2G07690 | 35.950 | 637 | 327 | 16 | 33 | 639 | 53 | 638 | 5.66e-104 | 335 |
| MS.gene36485.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 210 | 823 | 6.90e-104 | 341 |
| MS.gene36485.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 208 | 821 | 7.44e-104 | 340 |
| MS.gene36485.t1 | AT5G44635 | 31.016 | 748 | 389 | 16 | 19 | 701 | 29 | 714 | 2.92e-97 | 320 |
| MS.gene36485.t1 | AT5G44635 | 31.016 | 748 | 389 | 16 | 19 | 701 | 29 | 714 | 7.83e-97 | 320 |
| MS.gene36485.t1 | AT3G09660 | 33.219 | 584 | 332 | 11 | 106 | 649 | 143 | 708 | 4.09e-91 | 302 |
| MS.gene36485.t1 | AT3G09660 | 33.048 | 584 | 330 | 12 | 106 | 649 | 143 | 705 | 4.35e-91 | 303 |
| MS.gene36485.t1 | AT3G09660 | 33.219 | 584 | 332 | 11 | 106 | 649 | 143 | 708 | 1.21e-90 | 302 |
| MS.gene36485.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.61e-64 | 228 |
| MS.gene36485.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.88e-64 | 227 |
Find 180 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCGACATTACATCTAATT+TGG | 0.103330 | 4.1:-18356987 | MS.gene36485:CDS |
| ACTACTGGTCGGGGTTCTTC+TGG | 0.126682 | 4.1:-18356072 | MS.gene36485:CDS |
| GATCTTCTTTCTGAATTTAT+AGG | 0.193496 | 4.1:-18358286 | MS.gene36485:CDS |
| GAAGCATTCAATTCCCTATT+TGG | 0.198726 | 4.1:-18353564 | MS.gene36485:CDS |
| GCAGGACGTGCTCTGATATT+TGG | 0.229377 | 4.1:+18355493 | None:intergenic |
| TTCTGAATTTATAGGTTCTA+TGG | 0.247965 | 4.1:-18358278 | MS.gene36485:CDS |
| CTTTCTGCTCAACTTCAATT+TGG | 0.261333 | 4.1:+18354738 | None:intergenic |
| CTACTGGTCGGGGTTCTTCT+GGG | 0.266254 | 4.1:-18356071 | MS.gene36485:CDS |
| CTTCTATACATGGCCATTCT+TGG | 0.268321 | 4.1:-18356395 | MS.gene36485:CDS |
| GCCACTTACAGTTCCATATA+TGG | 0.269512 | 4.1:+18355733 | None:intergenic |
| TCAAATGAGTTCCATTCTTT+AGG | 0.279773 | 4.1:+18356325 | None:intergenic |
| TCTAAAGTTCTGGCAGTTAT+TGG | 0.289117 | 4.1:+18354790 | None:intergenic |
| TGGCAGTTGAAAGACCTTTC+AGG | 0.304074 | 4.1:+18353679 | None:intergenic |
| CGCGACATTACATCTAATTT+GGG | 0.314962 | 4.1:-18356986 | MS.gene36485:CDS |
| AGCGCATATGCTGACCAAAT+AGG | 0.328388 | 4.1:+18353550 | None:intergenic |
| TATTATAGTTTCTAAAGTTC+TGG | 0.340428 | 4.1:+18354780 | None:intergenic |
| GCTATGATATCCACTGTTCT+TGG | 0.342887 | 4.1:+18356746 | None:intergenic |
| GCAGCTGCAAATCCCATATA+TGG | 0.344979 | 4.1:-18355746 | MS.gene36485:CDS |
| AACTTGCTTGTGACCGAGTA+TGG | 0.352631 | 4.1:-18356842 | MS.gene36485:CDS |
| AGAAGAGAGGGAAAGGGAAC+TGG | 0.357571 | 4.1:-18354076 | MS.gene36485:CDS |
| GAATCCTATGCTTAGCATAA+TGG | 0.359551 | 4.1:+18355200 | None:intergenic |
| TCCCCTTCCTTCAAATACTT+TGG | 0.360134 | 4.1:+18358364 | None:intergenic |
| CGATTAAGCGGCGGCGTTTG+TGG | 0.368234 | 4.1:+18358585 | None:intergenic |
| CGATTTCGTTCTGCCATTGA+TGG | 0.369492 | 4.1:-18355462 | MS.gene36485:CDS |
| GATATTTGGCGATCAATATC+AGG | 0.372045 | 4.1:+18355507 | None:intergenic |
| AGATGTATTGCTCCTGTTAG+AGG | 0.373970 | 4.1:-18353448 | MS.gene36485:intron |
| GGCGATCGTGTAGCTATTGT+TGG | 0.378452 | 4.1:-18356692 | MS.gene36485:CDS |
| CTCGTTGATTCTTGCAAGCC+TGG | 0.380513 | 4.1:-18356713 | MS.gene36485:CDS |
| CAAGTTCTCGTTGGATTTGA+AGG | 0.381551 | 4.1:-18358340 | MS.gene36485:CDS |
| TGATCTGTTGTTTATTGTGT+TGG | 0.388371 | 4.1:-18355541 | MS.gene36485:CDS |
| CTGCTTTCTTTATCCAAGAA+TGG | 0.398574 | 4.1:+18356382 | None:intergenic |
| CTATGATATCCACTGTTCTT+GGG | 0.402129 | 4.1:+18356747 | None:intergenic |
| GGGATATATAAGGCTCTTCC+AGG | 0.405737 | 4.1:-18356671 | MS.gene36485:CDS |
| TCAAAAGATGTACCTCTAAC+AGG | 0.409245 | 4.1:+18353436 | None:intergenic |
| CATGATGGGAGTGCAAGATA+TGG | 0.410032 | 4.1:-18355349 | MS.gene36485:CDS |
| ACCCCGACCAGTAGTTGATA+TGG | 0.413616 | 4.1:+18356080 | None:intergenic |
| GCTTGTGAAGCTTCCGGTGG+TGG | 0.414230 | 4.1:+18357018 | None:intergenic |
| CAAGAATGGCCATGTATAGA+AGG | 0.416117 | 4.1:+18356396 | None:intergenic |
| GCAGTGTGAATGGTGTATTC+AGG | 0.418297 | 4.1:-18356637 | MS.gene36485:intron |
| GCATCCTCTATGTCTGCAAT+AGG | 0.418566 | 4.1:+18353507 | None:intergenic |
| CTTGTGAAGCTTCCGGTGGT+GGG | 0.424475 | 4.1:+18357019 | None:intergenic |
| TCTAATTTGGGTTTGCCCAC+AGG | 0.425040 | 4.1:-18356974 | MS.gene36485:CDS |
| GTTTATTGTGTTGGACCAAA+TGG | 0.429107 | 4.1:-18355532 | MS.gene36485:CDS |
| GCGCATATGCTGACCAAATA+GGG | 0.430181 | 4.1:+18353551 | None:intergenic |
| AGGTCTTCAGGGCTGTAGAT+TGG | 0.430461 | 4.1:+18356483 | None:intergenic |
| AGCCATATCAACTACTGGTC+GGG | 0.431922 | 4.1:-18356082 | MS.gene36485:CDS |
| AGTGAGACCAACAGCAGGTT+GGG | 0.432976 | 4.1:+18353702 | None:intergenic |
| CCACTTACAGTTCCATATAT+GGG | 0.434161 | 4.1:+18355734 | None:intergenic |
| GTTACTTCAGATCAAGAAAC+AGG | 0.437032 | 4.1:-18356030 | MS.gene36485:intron |
| TCATAAAGAACTGACAGAAA+TGG | 0.437741 | 4.1:-18354109 | MS.gene36485:CDS |
| GTTGAGAAGAGATACATTGT+TGG | 0.438233 | 4.1:+18356521 | None:intergenic |
| GCATATGCGCTCCAACCGTT+TGG | 0.444476 | 4.1:-18353538 | MS.gene36485:CDS |
| CTCCACAACTTCCGCGACTT+AGG | 0.449467 | 4.1:-18358548 | MS.gene36485:CDS |
| ACTGTTCTTGGGAGCTGACC+AGG | 0.451812 | 4.1:+18356758 | None:intergenic |
| GGTTCTATGGTTTGTGTCGA+GGG | 0.452369 | 4.1:-18358265 | MS.gene36485:CDS |
| GGTCGGGGTTCTTCTGGGGT+TGG | 0.454303 | 4.1:-18356066 | MS.gene36485:CDS |
| ATCGCGGCTTGTGAAGCTTC+CGG | 0.460196 | 4.1:+18357012 | None:intergenic |
| AGCGTGAAGAAGAGAGGGAA+AGG | 0.461495 | 4.1:-18354083 | MS.gene36485:CDS |
| ACCGTAACTATTGCTAAAGC+TGG | 0.461797 | 4.1:-18355806 | MS.gene36485:CDS |
| GTAATATCACCTCGTCGGTC+AGG | 0.470980 | 4.1:+18355170 | None:intergenic |
| ATCACCTCGTCGGTCAGGTC+AGG | 0.472355 | 4.1:+18355175 | None:intergenic |
| AGCTATTGTTGGGATATATA+AGG | 0.475943 | 4.1:-18356681 | MS.gene36485:CDS |
| CACTCATAGGTTCTCTCGTA+AGG | 0.476726 | 4.1:-18357072 | MS.gene36485:intron |
| CCGCAGCATACGCTGAGCTC+AGG | 0.478922 | 4.1:-18354935 | MS.gene36485:CDS |
| GCAGGTGAGGCGGCACATGA+TGG | 0.487147 | 4.1:-18355364 | MS.gene36485:intron |
| ACTTCCGCGACTTAGGAAAC+AGG | 0.488263 | 4.1:-18358541 | MS.gene36485:intron |
| GATCAATATCAGGATCCATT+TGG | 0.488984 | 4.1:+18355517 | None:intergenic |
| GAGAAAGAAGGTTAGAAGCT+GGG | 0.489696 | 4.1:-18355928 | MS.gene36485:CDS |
| AAGAATGGAACTCATTTGAG+AGG | 0.490629 | 4.1:-18356321 | MS.gene36485:CDS |
| CCCTTAGCCATATCAACTAC+TGG | 0.490846 | 4.1:-18356087 | MS.gene36485:CDS |
| GGAGAAAGAAGGTTAGAAGC+TGG | 0.494652 | 4.1:-18355929 | MS.gene36485:CDS |
| ATAGAGGATGCTATCAATAG+AGG | 0.500047 | 4.1:-18353495 | MS.gene36485:CDS |
| TGCTTATCTACCTCCATCAA+TGG | 0.500206 | 4.1:+18355449 | None:intergenic |
| TGGATGAGCGTGAAGAAGAG+AGG | 0.506377 | 4.1:-18354089 | MS.gene36485:CDS |
| ATCCAAAGTATTTGAAGGAA+GGG | 0.508850 | 4.1:-18358366 | MS.gene36485:CDS |
| TACTGGTCGGGGTTCTTCTG+GGG | 0.512239 | 4.1:-18356070 | MS.gene36485:CDS |
| ACCAGTAGTTGATATGGCTA+AGG | 0.512348 | 4.1:+18356086 | None:intergenic |
| CCCAGCTTTAGCAATAGTTA+CGG | 0.512480 | 4.1:+18355805 | None:intergenic |
| TTCCTAAGTCGCGGAAGTTG+TGG | 0.513194 | 4.1:+18358546 | None:intergenic |
| CAATAGGTATTTGATCCAAA+CGG | 0.513204 | 4.1:+18353523 | None:intergenic |
| TAGTGACATTAATATGATGA+TGG | 0.514077 | 4.1:-18356166 | MS.gene36485:CDS |
| AAAAGCAAAGGCAGTGTGAA+TGG | 0.514455 | 4.1:-18356647 | MS.gene36485:CDS |
| AGGTTCTATGGTTTGTGTCG+AGG | 0.516449 | 4.1:-18358266 | MS.gene36485:CDS |
| AGCTGATGGAATAGTGCATA+TGG | 0.519463 | 4.1:-18353118 | MS.gene36485:CDS |
| GATGCTATCAATAGAGGGGC+AGG | 0.523084 | 4.1:-18353489 | MS.gene36485:CDS |
| GATCCAAAGTATTTGAAGGA+AGG | 0.524402 | 4.1:-18358367 | MS.gene36485:CDS |
| CTGTTGGTCTCACTCCTGAA+AGG | 0.524781 | 4.1:-18353693 | MS.gene36485:intron |
| GTGGAGAAGAACCTAAAGAA+TGG | 0.527656 | 4.1:-18356336 | MS.gene36485:CDS |
| TACATCTGCAGAGCTGTAAG+TGG | 0.528161 | 4.1:+18353464 | None:intergenic |
| GTTCATTTCTGCCCCACCAC+CGG | 0.530449 | 4.1:-18357031 | MS.gene36485:CDS |
| GTAACTCGGCGAGAAACAAA+AGG | 0.531202 | 4.1:+18358316 | None:intergenic |
| GCGATCGTGTAGCTATTGTT+GGG | 0.531638 | 4.1:-18356691 | MS.gene36485:CDS |
| TCACTTGCACCTTCTATACA+TGG | 0.532357 | 4.1:-18356405 | MS.gene36485:CDS |
| GATCTTGTGATTACCCTTGT+GGG | 0.532708 | 4.1:+18356941 | None:intergenic |
| GTATTTGCACATTCCATACT+CGG | 0.534916 | 4.1:+18356829 | None:intergenic |
| TCATCAAACCTTGTCCATGC+AGG | 0.536771 | 4.1:-18356801 | MS.gene36485:CDS |
| AGTTGAGACTTGGCAACAGA+TGG | 0.538574 | 4.1:+18356135 | None:intergenic |
| TAGAGGATGCTATCAATAGA+GGG | 0.539121 | 4.1:-18353494 | MS.gene36485:CDS |
| TAGTGATCCAAAGTATTTGA+AGG | 0.539186 | 4.1:-18358371 | MS.gene36485:CDS |
| TTTATTGATGCTTGGTGGAG+TGG | 0.540439 | 4.1:-18356355 | MS.gene36485:CDS |
| GTCGCGGAAGTTGTGGAGAT+CGG | 0.540703 | 4.1:+18358553 | None:intergenic |
| TGCAAGATATGGAAGAGAAG+AGG | 0.544193 | 4.1:-18355338 | MS.gene36485:CDS |
| TGCTCTCAAGAGTTGAGACT+TGG | 0.546404 | 4.1:+18356125 | None:intergenic |
| GGATGAGCGTGAAGAAGAGA+GGG | 0.547538 | 4.1:-18354088 | MS.gene36485:CDS |
| AAATATAACAGAATGCTACA+TGG | 0.553194 | 4.1:-18355286 | MS.gene36485:CDS |
| CAGGTGAGGCGGCACATGAT+GGG | 0.554148 | 4.1:-18355363 | MS.gene36485:CDS |
| GCGGTTACCGAAGTTGTTCG+TGG | 0.554563 | 4.1:-18358394 | MS.gene36485:CDS |
| ACAATAGCTACACGATCGCC+AGG | 0.554581 | 4.1:+18356695 | None:intergenic |
| AGGAACTTCCTGCATGGACA+AGG | 0.555183 | 4.1:+18356793 | None:intergenic |
| AGAGGGAAAGGGAACTGGAG+AGG | 0.555234 | 4.1:-18354071 | MS.gene36485:CDS |
| AGAAAGAAGGTTAGAAGCTG+GGG | 0.555415 | 4.1:-18355927 | MS.gene36485:CDS |
| CAAATTGAAGTTGAGCAGAA+AGG | 0.555939 | 4.1:-18354737 | MS.gene36485:intron |
| AACAGCAGGTTGGGCTTCTG+AGG | 0.561016 | 4.1:+18353711 | None:intergenic |
| AATAGATTAATGATAGCTGA+TGG | 0.561185 | 4.1:-18353132 | MS.gene36485:CDS |
| TGTTTATTGCAGGATGAAAG+TGG | 0.562229 | 4.1:-18356866 | MS.gene36485:intron |
| GAAGATCCCTCGGCGTAACT+CGG | 0.562743 | 4.1:+18358302 | None:intergenic |
| GAAGGGGAACAAGTTCTCGT+TGG | 0.563161 | 4.1:-18358349 | MS.gene36485:CDS |
| TGTAGCTATACACGAAGTAA+TGG | 0.564849 | 4.1:-18355837 | MS.gene36485:CDS |
| CAGGATCTGTTTATCCCACA+AGG | 0.565225 | 4.1:-18356955 | MS.gene36485:CDS |
| AATACCTATTGCAGACATAG+AGG | 0.567260 | 4.1:-18353511 | MS.gene36485:CDS |
| GCTGGCTTTGTGCAGACTGG+AGG | 0.568451 | 4.1:-18354820 | MS.gene36485:intron |
| AATGATTGCATATACTCACT+TGG | 0.571052 | 4.1:+18358424 | None:intergenic |
| TAGCTCAACATCAGATGCCA+TGG | 0.571126 | 4.1:-18353746 | MS.gene36485:CDS |
| TGAGGTATCGTCTACTTCCA+TGG | 0.571458 | 4.1:+18353729 | None:intergenic |
| GTTCCTGAAAATTCTGCACC+TGG | 0.572249 | 4.1:-18356776 | MS.gene36485:CDS |
| AATCGAGAAAGCAAAGAGTC+CGG | 0.573316 | 4.1:+18355564 | None:intergenic |
| GTATGGAATGTGCAAATACA+AGG | 0.573655 | 4.1:-18356825 | MS.gene36485:CDS |
| AGGGCTGACGGTGAAAATGA+TGG | 0.574482 | 4.1:-18354042 | MS.gene36485:CDS |
| GCGTGAAGAAGAGAGGGAAA+GGG | 0.575235 | 4.1:-18354082 | MS.gene36485:CDS |
| GCCATATCAACTACTGGTCG+GGG | 0.576917 | 4.1:-18356081 | MS.gene36485:CDS |
| TCCAAAGTATTTGAAGGAAG+GGG | 0.578778 | 4.1:-18358365 | MS.gene36485:CDS |
| AAGGTTAGAAGCTGGGGCAA+TGG | 0.578812 | 4.1:-18355921 | MS.gene36485:CDS |
| GACATTAATATGATGATGGT+TGG | 0.581184 | 4.1:-18356162 | MS.gene36485:CDS |
| ATCACTACCACGAACAACTT+CGG | 0.581462 | 4.1:+18358387 | None:intergenic |
| GGGAACTGGAGAGGAAGCGT+AGG | 0.584238 | 4.1:-18354062 | MS.gene36485:CDS |
| GAGAGGAAGCGTAGGGCTGA+CGG | 0.585761 | 4.1:-18354054 | MS.gene36485:CDS |
| AGGTATTTGATCCAAACGGT+TGG | 0.589006 | 4.1:+18353527 | None:intergenic |
| AACGAAATCGATGCATACGC+AGG | 0.589498 | 4.1:+18355475 | None:intergenic |
| TCAGAAGCCCAACCTGCTGT+TGG | 0.593759 | 4.1:-18353709 | MS.gene36485:CDS |
| TAGCCATATCAACTACTGGT+CGG | 0.594899 | 4.1:-18356083 | MS.gene36485:CDS |
| CCGTAACTATTGCTAAAGCT+GGG | 0.595027 | 4.1:-18355805 | MS.gene36485:CDS |
| TTTCGTTCTGCCATTGATGG+AGG | 0.597336 | 4.1:-18355459 | MS.gene36485:intron |
| AATTCAGAAAGAAGATCCCT+CGG | 0.598017 | 4.1:+18358292 | None:intergenic |
| CCAGTAGTTGATATGGCTAA+GGG | 0.599324 | 4.1:+18356087 | None:intergenic |
| TTGTGAAGCTTCCGGTGGTG+GGG | 0.601653 | 4.1:+18357020 | None:intergenic |
| GGATCTTGTGATTACCCTTG+TGG | 0.602488 | 4.1:+18356940 | None:intergenic |
| AGAATGGAACTCATTTGAGA+GGG | 0.605684 | 4.1:-18356320 | MS.gene36485:intron |
| GATGATACATTTGATCTGCT+CGG | 0.610870 | 4.1:-18356432 | MS.gene36485:CDS |
| TGTATCTCTTCTCAACAAAG+AGG | 0.611474 | 4.1:-18356514 | MS.gene36485:CDS |
| ATATCCATTATGCTAAGCAT+AGG | 0.611548 | 4.1:-18355204 | MS.gene36485:CDS |
| AGGTTCTCTCGTAAGGCCAA+AGG | 0.615602 | 4.1:-18357065 | MS.gene36485:CDS |
| GAGTGAGACCAACAGCAGGT+TGG | 0.616359 | 4.1:+18353701 | None:intergenic |
| TTCTCGCCGAGTTACGCCGA+GGG | 0.617425 | 4.1:-18358308 | MS.gene36485:CDS |
| TCAGGAGTGAGACCAACAGC+AGG | 0.620390 | 4.1:+18353697 | None:intergenic |
| AACAGTGGATATCATAGCAG+AGG | 0.624532 | 4.1:-18356741 | MS.gene36485:CDS |
| GAATGCAAAGTCAAATGCGA+AGG | 0.628643 | 4.1:-18354913 | MS.gene36485:intron |
| GGAACTGGAGAGGAAGCGTA+GGG | 0.634871 | 4.1:-18354061 | MS.gene36485:CDS |
| TGTGGGATAAACAGATCCTG+TGG | 0.635018 | 4.1:+18356958 | None:intergenic |
| TAATGCTCGTTGCAGTGTGG+TGG | 0.636953 | 4.1:-18355768 | MS.gene36485:CDS |
| CGAACCTGTTTCCTAAGTCG+CGG | 0.638069 | 4.1:+18358537 | None:intergenic |
| AACGAGCATTAAGTGAGGCA+TGG | 0.639848 | 4.1:+18355780 | None:intergenic |
| TATTAGTAATATCACCTCGT+CGG | 0.642234 | 4.1:+18355165 | None:intergenic |
| CGGAGATGTTGACGATTAAG+CGG | 0.642528 | 4.1:+18358573 | None:intergenic |
| ACTTATCAATGCAGGTGAGG+CGG | 0.643335 | 4.1:-18355374 | MS.gene36485:intron |
| ATGTAATGTCGCGATAATCG+CGG | 0.653688 | 4.1:+18356996 | None:intergenic |
| GCAATGGTTCTTGCTGACAG+AGG | 0.666936 | 4.1:-18355905 | MS.gene36485:CDS |
| GTGGGATAAACAGATCCTGT+GGG | 0.670399 | 4.1:+18356959 | None:intergenic |
| GCGGCTTGTGAAGCTTCCGG+TGG | 0.672913 | 4.1:+18357015 | None:intergenic |
| TGGTCAGCTCCCAAGAACAG+TGG | 0.674225 | 4.1:-18356756 | MS.gene36485:CDS |
| GAAAATGATGGTCCTGACCA+TGG | 0.674466 | 4.1:-18354030 | MS.gene36485:CDS |
| TTTCTCGCCGAGTTACGCCG+AGG | 0.678265 | 4.1:-18358309 | MS.gene36485:CDS |
| CCTGAGCTCAGCGTATGCTG+CGG | 0.682238 | 4.1:+18354935 | None:intergenic |
| AGATGTTGACGATTAAGCGG+CGG | 0.690438 | 4.1:+18358576 | None:intergenic |
| AGAGGATGCTATCAATAGAG+GGG | 0.695629 | 4.1:-18353493 | MS.gene36485:CDS |
| ACTTAATGCTCGTTGCAGTG+TGG | 0.710896 | 4.1:-18355771 | MS.gene36485:CDS |
| AGGATCTGTTTATCCCACAA+GGG | 0.714764 | 4.1:-18356954 | MS.gene36485:intron |
| TCAACCTGACCTGACCGACG+AGG | 0.718365 | 4.1:-18355179 | MS.gene36485:intron |
| CATGGAAAGAAAACTGACAG+AGG | 0.723703 | 4.1:-18355268 | MS.gene36485:CDS |
| ACTGCAACGAGCATTAAGTG+AGG | 0.755012 | 4.1:+18355775 | None:intergenic |
| CAGGCTTGCAAGAATCAACG+AGG | 0.764400 | 4.1:+18356714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTGTAATATATAAGA+GGG | + | chr4.1:18356797-18356816 | None:intergenic | 10.0% |
| !! | GAAAAATTTAATTGATATAA+GGG | + | chr4.1:18356926-18356945 | None:intergenic | 10.0% |
| !! | TCAAAAATCAATTATTATAA+CGG | + | chr4.1:18353734-18353753 | None:intergenic | 10.0% |
| !! | GATAAATTGTAATATATAAG+AGG | + | chr4.1:18356798-18356817 | None:intergenic | 15.0% |
| !! | GGAAAAATTTAATTGATATA+AGG | + | chr4.1:18356927-18356946 | None:intergenic | 15.0% |
| !!! | AATTATAATTTCTTTTTGTC+AGG | - | chr4.1:18355952-18355971 | MS.gene36485:intron | 15.0% |
| !!! | ACTGAAAAATTAATTTGAAA+TGG | + | chr4.1:18357292-18357311 | None:intergenic | 15.0% |
| !!! | ATTATATCACTCAATTTTTT+TGG | - | chr4.1:18355626-18355645 | MS.gene36485:intron | 15.0% |
| !!! | CTATCTTTTTAATGTTTTTA+AGG | + | chr4.1:18355442-18355461 | None:intergenic | 15.0% |
| !!! | TATATCTTAATTTTTACCAT+AGG | - | chr4.1:18357975-18357994 | MS.gene36485:intron | 15.0% |
| !! | AAAAATAATGCTAGAAATGA+AGG | + | chr4.1:18354986-18355005 | None:intergenic | 20.0% |
| !! | ATATTAATGTCACTAAAAGA+AGG | + | chr4.1:18355731-18355750 | None:intergenic | 20.0% |
| !! | ATTACAATTTATCTGTTGTA+AGG | - | chr4.1:18356805-18356824 | MS.gene36485:CDS | 20.0% |
| !! | ATTTAATTGATATAAGGGAT+TGG | + | chr4.1:18356921-18356940 | None:intergenic | 20.0% |
| !! | CTAAATAAGTTTAAGAAATC+AGG | + | chr4.1:18358103-18358122 | None:intergenic | 20.0% |
| !! | TAAGAAAACAAAGTTATAAG+AGG | + | chr4.1:18358257-18358276 | None:intergenic | 20.0% |
| !! | TATAACACAAGATAAGATAA+AGG | - | chr4.1:18353895-18353914 | MS.gene36485:intron | 20.0% |
| !! | TTGAGTGATATAATGATATA+TGG | + | chr4.1:18355620-18355639 | None:intergenic | 20.0% |
| !!! | AAATATTTTAATGTGTCCTT+GGG | - | chr4.1:18354622-18354641 | MS.gene36485:intron | 20.0% |
| !!! | AAATCAATAGTTCTACATAT+CGG | - | chr4.1:18357042-18357061 | MS.gene36485:CDS | 20.0% |
| !!! | AAATTAGTTTATGCTATCTT+TGG | - | chr4.1:18357921-18357940 | MS.gene36485:intron | 20.0% |
| !!! | AATTAGTTTATGCTATCTTT+GGG | - | chr4.1:18357922-18357941 | MS.gene36485:intron | 20.0% |
| !!! | AGCATTATTTTTATTACGAA+AGG | - | chr4.1:18354994-18355013 | MS.gene36485:intron | 20.0% |
| !!! | ATAATTGATTTTTGATTCCT+AGG | - | chr4.1:18353739-18353758 | MS.gene36485:CDS | 20.0% |
| !!! | ATTTTTATTATAAGCTCTCT+AGG | + | chr4.1:18353963-18353982 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTTGAATCAGAT+CGG | - | chr4.1:18353255-18353274 | MS.gene36485:intron | 20.0% |
| !!! | TAAATATTTTAATGTGTCCT+TGG | - | chr4.1:18354621-18354640 | MS.gene36485:intron | 20.0% |
| !!! | TAATTGATTTTTGATTCCTA+GGG | - | chr4.1:18353740-18353759 | MS.gene36485:CDS | 20.0% |
| !!! | TATCAATTAAATTTTTCCAC+AGG | - | chr4.1:18356929-18356948 | MS.gene36485:intron | 20.0% |
| !!! | TATTATAGTTTCTAAAGTTC+TGG | + | chr4.1:18357125-18357144 | None:intergenic | 20.0% |
| !!! | TTATACTTTACCTTTTGTTT+TGG | - | chr4.1:18354165-18354184 | MS.gene36485:CDS | 20.0% |
| ! | AAAAGACAAGACAATGTAAT+TGG | + | chr4.1:18358723-18358742 | None:intergenic | 25.0% |
| ! | AAACAGGTAAATATTCTTCA+AGG | - | chr4.1:18355888-18355907 | MS.gene36485:CDS | 25.0% |
| ! | AAATATAACAGAATGCTACA+TGG | - | chr4.1:18356616-18356635 | MS.gene36485:intron | 25.0% |
| ! | AACTAAAAATATTGGACTAC+CGG | - | chr4.1:18356319-18356338 | MS.gene36485:intron | 25.0% |
| ! | AAGATTAGATGCTTTATAAC+CGG | + | chr4.1:18354697-18354716 | None:intergenic | 25.0% |
| ! | AATAGATTAATGATAGCTGA+TGG | - | chr4.1:18358770-18358789 | MS.gene36485:CDS | 25.0% |
| ! | AATGTTCTGTAATTAGGATT+TGG | + | chr4.1:18354313-18354332 | None:intergenic | 25.0% |
| ! | ACATTAAAAAGATAGCTGAA+AGG | - | chr4.1:18355447-18355466 | MS.gene36485:intron | 25.0% |
| ! | ACCCAAAAGAATCAAATAAA+CGG | + | chr4.1:18354578-18354597 | None:intergenic | 25.0% |
| ! | ATACATTGATACCATGTTAA+TGG | - | chr4.1:18358062-18358081 | MS.gene36485:intron | 25.0% |
| ! | ATTAACATACTTATCAATGC+AGG | - | chr4.1:18356520-18356539 | MS.gene36485:CDS | 25.0% |
| ! | ATTACTCCTTGATTATGATT+AGG | - | chr4.1:18353813-18353832 | MS.gene36485:intron | 25.0% |
| ! | CATTAAAAAGATAGCTGAAA+GGG | - | chr4.1:18355448-18355467 | MS.gene36485:intron | 25.0% |
| ! | GATCTTCTTTCTGAATTTAT+AGG | - | chr4.1:18353616-18353635 | MS.gene36485:intron | 25.0% |
| ! | GTGGAAATGATTAAGATTAT+AGG | + | chr4.1:18354493-18354512 | None:intergenic | 25.0% |
| ! | TAGTATGATTCATGAGAAAA+CGG | - | chr4.1:18353701-18353720 | MS.gene36485:CDS | 25.0% |
| ! | TAGTGACATTAATATGATGA+TGG | - | chr4.1:18355736-18355755 | MS.gene36485:intron | 25.0% |
| ! | TATCATTTCCTAAAACTCAA+TGG | + | chr4.1:18354603-18354622 | None:intergenic | 25.0% |
| ! | TGTTACGAATATCTAAAAGT+TGG | + | chr4.1:18357206-18357225 | None:intergenic | 25.0% |
| ! | TTAAAGAGAAGTGAAGAATT+AGG | + | chr4.1:18353183-18353202 | None:intergenic | 25.0% |
| ! | TTAATCATTTCCACCAAATT+TGG | - | chr4.1:18354499-18354518 | MS.gene36485:intron | 25.0% |
| ! | TTCTGAATTTATAGGTTCTA+TGG | - | chr4.1:18353624-18353643 | MS.gene36485:intron | 25.0% |
| ! | TTCTGTTTCATACAGATTAT+GGG | - | chr4.1:18354775-18354794 | MS.gene36485:CDS | 25.0% |
| ! | TTTCTGTTTCATACAGATTA+TGG | - | chr4.1:18354774-18354793 | MS.gene36485:CDS | 25.0% |
| !! | AACAAGAGCATAAAAATCAT+CGG | + | chr4.1:18356898-18356917 | None:intergenic | 25.0% |
| !! | AACAGATTATTACGTTTTTC+AGG | - | chr4.1:18353443-18353462 | MS.gene36485:intron | 25.0% |
| !! | AACGATGTTAATTTAGTTTC+TGG | + | chr4.1:18358019-18358038 | None:intergenic | 25.0% |
| !! | AATTAATTTGAAATGGACTC+TGG | + | chr4.1:18357285-18357304 | None:intergenic | 25.0% |
| !! | ATTAGTTTATGCTATCTTTG+GGG | - | chr4.1:18357923-18357942 | MS.gene36485:intron | 25.0% |
| !! | CACATTTAGAATTACAAAGA+CGG | + | chr4.1:18358677-18358696 | None:intergenic | 25.0% |
| !! | GGTAATACAACTATTCATTT+TGG | + | chr4.1:18357474-18357493 | None:intergenic | 25.0% |
| !! | GTTAATTTAGTTTCTGGAAA+CGG | + | chr4.1:18358013-18358032 | None:intergenic | 25.0% |
| !! | TTAATTTAGTTTCTGGAAAC+GGG | + | chr4.1:18358012-18358031 | None:intergenic | 25.0% |
| !! | TTTGCCTAAAAGTAATTTTC+TGG | + | chr4.1:18357505-18357524 | None:intergenic | 25.0% |
| !!! | AAAAGTAATTTTCTGGCATT+TGG | + | chr4.1:18357498-18357517 | None:intergenic | 25.0% |
| !!! | AAAGTGATAAAACCACTTTT+GGG | + | chr4.1:18357384-18357403 | None:intergenic | 25.0% |
| !!! | AACTTGTTAATTTCACTCAT+AGG | - | chr4.1:18354817-18354836 | MS.gene36485:intron | 25.0% |
| !!! | AATGCCAGAAAATTACTTTT+AGG | - | chr4.1:18357498-18357517 | MS.gene36485:intron | 25.0% |
| !!! | CATAATGGATATACTTTTTC+AGG | + | chr4.1:18356690-18356709 | None:intergenic | 25.0% |
| !!! | GTAGAACTATTGATTTGTTT+CGG | + | chr4.1:18357038-18357057 | None:intergenic | 25.0% |
| !!! | TAATGTTTTTAAGGTCTTCA+GGG | + | chr4.1:18355433-18355452 | None:intergenic | 25.0% |
| !!! | TAGAACTATTGATTTGTTTC+GGG | + | chr4.1:18357037-18357056 | None:intergenic | 25.0% |
| !!! | TTAATGTTTTTAAGGTCTTC+AGG | + | chr4.1:18355434-18355453 | None:intergenic | 25.0% |
| !!! | TTCTTTTACTTTTAGAACCA+TGG | + | chr4.1:18357892-18357911 | None:intergenic | 25.0% |
| AAAGAGAGAAACTGAAAGAA+AGG | + | chr4.1:18358650-18358669 | None:intergenic | 30.0% | |
| AACAAAATCGAATTCTACAG+TGG | + | chr4.1:18353415-18353434 | None:intergenic | 30.0% | |
| AAGAAAAATTGTAGCCAATG+AGG | + | chr4.1:18357619-18357638 | None:intergenic | 30.0% | |
| AAGAGAGAAACTGAAAGAAA+GGG | + | chr4.1:18358649-18358668 | None:intergenic | 30.0% | |
| AATGATTGCATATACTCACT+TGG | + | chr4.1:18353481-18353500 | None:intergenic | 30.0% | |
| ACTGACTAAATGTTTATTGC+AGG | - | chr4.1:18355026-18355045 | MS.gene36485:intron | 30.0% | |
| AGAAAAATTGTAGCCAATGA+GGG | + | chr4.1:18357618-18357637 | None:intergenic | 30.0% | |
| AGCTATTGTTGGGATATATA+AGG | - | chr4.1:18355221-18355240 | MS.gene36485:CDS | 30.0% | |
| AGTCTTTCTTTAGTTACACT+TGG | - | chr4.1:18357309-18357328 | MS.gene36485:intron | 30.0% | |
| AGTTATAAGAGGCTAAAGAT+TGG | + | chr4.1:18358246-18358265 | None:intergenic | 30.0% | |
| AGTTTCTGTTCAATAAAGCA+AGG | + | chr4.1:18355325-18355344 | None:intergenic | 30.0% | |
| ATATCCATTATGCTAAGCAT+AGG | - | chr4.1:18356698-18356717 | MS.gene36485:CDS | 30.0% | |
| CAAAAATGTCACCATTAACA+TGG | + | chr4.1:18358076-18358095 | None:intergenic | 30.0% | |
| CAATAATTACCGACCAAATT+TGG | + | chr4.1:18354515-18354534 | None:intergenic | 30.0% | |
| CAATAGGTATTTGATCCAAA+CGG | + | chr4.1:18358382-18358401 | None:intergenic | 30.0% | |
| CAATTGCTCAAATATGCATT+TGG | - | chr4.1:18357590-18357609 | MS.gene36485:intron | 30.0% | |
| CATTGAGTTATCATAATGTC+TGG | - | chr4.1:18358611-18358630 | MS.gene36485:CDS | 30.0% | |
| CCCAAAAGAATCAAATAAAC+GGG | + | chr4.1:18354577-18354596 | None:intergenic | 30.0% | |
| CTGACTCCAACTAAAAATAT+TGG | - | chr4.1:18356311-18356330 | MS.gene36485:intron | 30.0% | |
| GAGCTAGTAAAAAGAAAAAC+AGG | + | chr4.1:18358142-18358161 | None:intergenic | 30.0% | |
| GATAAATGTCAAGAATGTGT+TGG | + | chr4.1:18355671-18355690 | None:intergenic | 30.0% | |
| GTCTGTAATGTTCTGTAATT+AGG | + | chr4.1:18354319-18354338 | None:intergenic | 30.0% | |
| GTTTCTGTTCAATAAAGCAA+GGG | + | chr4.1:18355324-18355343 | None:intergenic | 30.0% | |
| GTTTGCAAAAGTTGTAATAC+TGG | - | chr4.1:18355701-18355720 | MS.gene36485:intron | 30.0% | |
| TATTAGTAATATCACCTCGT+CGG | + | chr4.1:18356740-18356759 | None:intergenic | 30.0% | |
| TCAAATGAGTTCCATTCTTT+AGG | + | chr4.1:18355580-18355599 | None:intergenic | 30.0% | |
| TCATAAAGAACTGACAGAAA+TGG | - | chr4.1:18357793-18357812 | MS.gene36485:intron | 30.0% | |
| TTTAGTTACACTTGGACATT+TGG | - | chr4.1:18357317-18357336 | MS.gene36485:intron | 30.0% | |
| ! | ACCCGTTTATTTGATTCTTT+TGG | - | chr4.1:18354573-18354592 | MS.gene36485:intron | 30.0% |
| ! | ATCCAAAGTATTTGAAGGAA+GGG | - | chr4.1:18353536-18353555 | MS.gene36485:CDS | 30.0% |
| ! | ATCTGTTGTAAGGAACTTTT+GGG | - | chr4.1:18356815-18356834 | MS.gene36485:CDS | 30.0% |
| ! | CAAGTTGTAAAAGTACAACA+AGG | + | chr4.1:18357671-18357690 | None:intergenic | 30.0% |
| ! | CCCGTTTATTTGATTCTTTT+GGG | - | chr4.1:18354574-18354593 | MS.gene36485:intron | 30.0% |
| ! | GAAAGTGATAAAACCACTTT+TGG | + | chr4.1:18357385-18357404 | None:intergenic | 30.0% |
| ! | TAGTGATCCAAAGTATTTGA+AGG | - | chr4.1:18353531-18353550 | MS.gene36485:CDS | 30.0% |
| ! | TATCTGTTGTAAGGAACTTT+TGG | - | chr4.1:18356814-18356833 | MS.gene36485:CDS | 30.0% |
| ! | TATGCAATCATTTTGTGATG+CGG | - | chr4.1:18353489-18353508 | MS.gene36485:CDS | 30.0% |
| ! | TGAACACTTTTAACAACCTT+TGG | + | chr4.1:18354856-18354875 | None:intergenic | 30.0% |
| ! | TGATCTGTTGTTTATTGTGT+TGG | - | chr4.1:18356361-18356380 | MS.gene36485:CDS | 30.0% |
| !! | GACATTAATATGATGATGGT+TGG | - | chr4.1:18355740-18355759 | MS.gene36485:intron | 30.0% |
| !! | TGGTAATAAGAGTCATTTTC+CGG | - | chr4.1:18354675-18354694 | MS.gene36485:intron | 30.0% |
| !!! | CACTCAATTTTTTTGGAAGA+TGG | - | chr4.1:18355633-18355652 | MS.gene36485:intron | 30.0% |
| !!! | CTGTTTATTTTGAAGTTGCT+GGG | - | chr4.1:18354116-18354135 | MS.gene36485:CDS | 30.0% |
| !!! | GGTAGTCCAATATTTTTAGT+TGG | + | chr4.1:18356320-18356339 | None:intergenic | 30.0% |
| !!! | TCTGTTTATTTTGAAGTTGC+TGG | - | chr4.1:18354115-18354134 | MS.gene36485:CDS | 30.0% |
| !!! | TTACCTTTTGTTTTGGTCAA+TGG | - | chr4.1:18354172-18354191 | MS.gene36485:intron | 30.0% |
| AAAAGCCACAAAGTCAAGTT+TGG | + | chr4.1:18356262-18356281 | None:intergenic | 35.0% | |
| AAACAGGCAGAGTTCAATAA+TGG | + | chr4.1:18358126-18358145 | None:intergenic | 35.0% | |
| AAACAGTTTACATCCGAAAC+AGG | + | chr4.1:18358299-18358318 | None:intergenic | 35.0% | |
| AAGAATGGAACTCATTTGAG+AGG | - | chr4.1:18355581-18355600 | MS.gene36485:CDS | 35.0% | |
| AATACCTATTGCAGACATAG+AGG | - | chr4.1:18358391-18358410 | MS.gene36485:CDS | 35.0% | |
| AATCTCAACTCTACCTGTTT+CGG | - | chr4.1:18358283-18358302 | MS.gene36485:CDS | 35.0% | |
| AATTCAGAAAGAAGATCCCT+CGG | + | chr4.1:18353613-18353632 | None:intergenic | 35.0% | |
| ACAGTGCCTAATCATAATCA+AGG | + | chr4.1:18353822-18353841 | None:intergenic | 35.0% | |
| ACGGGAAATAAATGAACCTA+TGG | + | chr4.1:18357994-18358013 | None:intergenic | 35.0% | |
| ACGTAATAGACATGTTATGC+AGG | - | chr4.1:18354441-18354460 | MS.gene36485:intron | 35.0% | |
| AGAAACTTGATTGATTGCTG+TGG | - | chr4.1:18355338-18355357 | MS.gene36485:CDS | 35.0% | |
| AGAATGGAACTCATTTGAGA+GGG | - | chr4.1:18355582-18355601 | MS.gene36485:CDS | 35.0% | |
| AGAGAATGTGATACTATTCC+TGG | + | chr4.1:18358535-18358554 | None:intergenic | 35.0% | |
| AGAGAGAAACTGAAAGAAAG+GGG | + | chr4.1:18358648-18358667 | None:intergenic | 35.0% | |
| ATAGAGGATGCTATCAATAG+AGG | - | chr4.1:18358407-18358426 | MS.gene36485:CDS | 35.0% | |
| CAAATTGAAGTTGAGCAGAA+AGG | - | chr4.1:18357165-18357184 | MS.gene36485:intron | 35.0% | |
| CATGTTATGCATTATGCTAG+AGG | - | chr4.1:18354648-18354667 | MS.gene36485:intron | 35.0% | |
| CCAAAAGATAACACCAATTG+CGG | + | chr4.1:18354729-18354748 | None:intergenic | 35.0% | |
| CCACTTACAGTTCCATATAT+GGG | + | chr4.1:18356171-18356190 | None:intergenic | 35.0% | |
| CGCGACATTACATCTAATTT+GGG | - | chr4.1:18354916-18354935 | MS.gene36485:CDS | 35.0% | |
| CTATGATATCCACTGTTCTT+GGG | + | chr4.1:18355158-18355177 | None:intergenic | 35.0% | |
| CTGCTTTCTTTATCCAAGAA+TGG | + | chr4.1:18355523-18355542 | None:intergenic | 35.0% | |
| CTTTCTGCTCAACTTCAATT+TGG | + | chr4.1:18357167-18357186 | None:intergenic | 35.0% | |
| GAATCCTATGCTTAGCATAA+TGG | + | chr4.1:18356705-18356724 | None:intergenic | 35.0% | |
| GACAATGTAATTGGAGTTTG+TGG | + | chr4.1:18358714-18358733 | None:intergenic | 35.0% | |
| GATATTTGGCGATCAATATC+AGG | + | chr4.1:18356398-18356417 | None:intergenic | 35.0% | |
| GATCAATATCAGGATCCATT+TGG | + | chr4.1:18356388-18356407 | None:intergenic | 35.0% | |
| GATGATACATTTGATCTGCT+CGG | - | chr4.1:18355470-18355489 | MS.gene36485:CDS | 35.0% | |
| GGAAAGAGTAAAGGTAAAAG+CGG | + | chr4.1:18353394-18353413 | None:intergenic | 35.0% | |
| GTATGGAATGTGCAAATACA+AGG | - | chr4.1:18355077-18355096 | MS.gene36485:intron | 35.0% | |
| GTATTTGCACATTCCATACT+CGG | + | chr4.1:18355076-18355095 | None:intergenic | 35.0% | |
| GTCAAGTTTGGAAGAGTTAA+AGG | + | chr4.1:18356250-18356269 | None:intergenic | 35.0% | |
| GTTACTTCAGATCAAGAAAC+AGG | - | chr4.1:18355872-18355891 | MS.gene36485:CDS | 35.0% | |
| GTTGAGAAGAGATACATTGT+TGG | + | chr4.1:18355384-18355403 | None:intergenic | 35.0% | |
| GTTTATTGTGTTGGACCAAA+TGG | - | chr4.1:18356370-18356389 | MS.gene36485:CDS | 35.0% | |
| TAATTACCGACCAAATTTGG+TGG | + | chr4.1:18354512-18354531 | None:intergenic | 35.0% | |
| TAGAGGATGCTATCAATAGA+GGG | - | chr4.1:18358408-18358427 | MS.gene36485:CDS | 35.0% | |
| TCAAAAGATGTACCTCTAAC+AGG | + | chr4.1:18358469-18358488 | None:intergenic | 35.0% | |
| TCATTTCCACCAAATTTGGT+CGG | - | chr4.1:18354503-18354522 | MS.gene36485:intron | 35.0% | |
| TCGCGACATTACATCTAATT+TGG | - | chr4.1:18354915-18354934 | MS.gene36485:CDS | 35.0% | |
| TGACCATTGACCAAAACAAA+AGG | + | chr4.1:18354178-18354197 | None:intergenic | 35.0% | |
| TGTAGCTATACACGAAGTAA+TGG | - | chr4.1:18356065-18356084 | MS.gene36485:CDS | 35.0% | |
| TGTATCTCTTCTCAACAAAG+AGG | - | chr4.1:18355388-18355407 | MS.gene36485:intron | 35.0% | |
| TGTTTATTGCAGGATGAAAG+TGG | - | chr4.1:18355036-18355055 | MS.gene36485:intron | 35.0% | |
| TTCTACAGTGGAAAGAGTAA+AGG | + | chr4.1:18353403-18353422 | None:intergenic | 35.0% | |
| TTGAATTCTCTAGTGTATGC+AGG | + | chr4.1:18356500-18356519 | None:intergenic | 35.0% | |
| ! | ACCCTTCCAACTTTTCTTAT+GGG | - | chr4.1:18357342-18357361 | MS.gene36485:intron | 35.0% |
| ! | GAAGCATTCAATTCCCTATT+TGG | - | chr4.1:18358338-18358357 | MS.gene36485:CDS | 35.0% |
| ! | GATCCAAAGTATTTGAAGGA+AGG | - | chr4.1:18353535-18353554 | MS.gene36485:CDS | 35.0% |
| ! | GATTATGATTAGGCACTGTT+TGG | - | chr4.1:18353823-18353842 | MS.gene36485:intron | 35.0% |
| ! | GCAGTGATTTTATTGATGCT+TGG | - | chr4.1:18355539-18355558 | MS.gene36485:CDS | 35.0% |
| ! | GTGATTTTATTGATGCTTGG+TGG | - | chr4.1:18355542-18355561 | MS.gene36485:CDS | 35.0% |
| ! | TACCCTTCCAACTTTTCTTA+TGG | - | chr4.1:18357341-18357360 | MS.gene36485:intron | 35.0% |
| ! | TCCAAAGTATTTGAAGGAAG+GGG | - | chr4.1:18353537-18353556 | MS.gene36485:CDS | 35.0% |
| ! | TCTAAAGTTCTGGCAGTTAT+TGG | + | chr4.1:18357115-18357134 | None:intergenic | 35.0% |
| ! | TCTTTTTGTCAGGAGAAAGA+AGG | - | chr4.1:18355962-18355981 | MS.gene36485:intron | 35.0% |
| ! | TTGGGTATCCATTGAGTTTT+AGG | - | chr4.1:18354592-18354611 | MS.gene36485:intron | 35.0% |
| !! | AGTAATTTTCTGGCATTTGG+CGG | + | chr4.1:18357495-18357514 | None:intergenic | 35.0% |
| !! | GATCGGAAAAAGCATTTACA+TGG | - | chr4.1:18353272-18353291 | MS.gene36485:intron | 35.0% |
| !! | GTTTTGTATTGATATCCTGC+TGG | - | chr4.1:18357064-18357083 | MS.gene36485:CDS | 35.0% |
| !! | TGTTAGAGGTACATCTTTTG+AGG | - | chr4.1:18358468-18358487 | MS.gene36485:intron | 35.0% |
| !!! | TATTTTAATGTGTCCTTGGG+TGG | - | chr4.1:18354625-18354644 | MS.gene36485:intron | 35.0% |
| !!! | TCTTTTTTACAAGCCGCAAT+TGG | - | chr4.1:18354713-18354732 | MS.gene36485:intron | 35.0% |
| !!! | TTACTTTTAGAACCATGGTC+AGG | + | chr4.1:18357887-18357906 | None:intergenic | 35.0% |
| AAAAGCAAAGGCAGTGTGAA+TGG | - | chr4.1:18355255-18355274 | MS.gene36485:CDS | 40.0% | |
| AAACAGGCTATCAGTAGCTT+TGG | - | chr4.1:18354068-18354087 | MS.gene36485:CDS | 40.0% | |
| AAAGCTACTGATAGCCTGTT+TGG | + | chr4.1:18354069-18354088 | None:intergenic | 40.0% | |
| AACAGGCTATCAGTAGCTTT+GGG | - | chr4.1:18354069-18354088 | MS.gene36485:CDS | 40.0% | |
| AACAGTGGATATCATAGCAG+AGG | - | chr4.1:18355161-18355180 | MS.gene36485:intron | 40.0% | |
| AATCGAGAAAGCAAAGAGTC+CGG | + | chr4.1:18356341-18356360 | None:intergenic | 40.0% | |
| AATGGTCAATGATCTGGAAG+TGG | - | chr4.1:18354190-18354209 | MS.gene36485:intron | 40.0% | |
| ACAAGTTCAAGAGAAACCCT+AGG | + | chr4.1:18353759-18353778 | None:intergenic | 40.0% | |
| ACCGTAACTATTGCTAAAGC+TGG | - | chr4.1:18356096-18356115 | MS.gene36485:CDS | 40.0% | |
| AGAAAGAAGGTTAGAAGCTG+GGG | - | chr4.1:18355975-18355994 | MS.gene36485:intron | 40.0% | |
| AGACTTCACAATAGCCATTC+AGG | + | chr4.1:18356867-18356886 | None:intergenic | 40.0% | |
| AGAGGATGCTATCAATAGAG+GGG | - | chr4.1:18358409-18358428 | MS.gene36485:CDS | 40.0% | |
| AGATGTATTGCTCCTGTTAG+AGG | - | chr4.1:18358454-18358473 | MS.gene36485:intron | 40.0% | |
| AGCTGATGGAATAGTGCATA+TGG | - | chr4.1:18358784-18358803 | MS.gene36485:CDS | 40.0% | |
| AGGATCTGTTTATCCCACAA+GGG | - | chr4.1:18354948-18354967 | MS.gene36485:CDS | 40.0% | |
| AGGTATTTGATCCAAACGGT+TGG | + | chr4.1:18358378-18358397 | None:intergenic | 40.0% | |
| ATCACTACCACGAACAACTT+CGG | + | chr4.1:18353518-18353537 | None:intergenic | 40.0% | |
| ATGTAATGTCGCGATAATCG+CGG | + | chr4.1:18354909-18354928 | None:intergenic | 40.0% | |
| ATGTAATTGGAGTTTGTGGC+TGG | + | chr4.1:18358710-18358729 | None:intergenic | 40.0% | |
| ATTTACCAACCAAGTGAGTC+TGG | + | chr4.1:18354551-18354570 | None:intergenic | 40.0% | |
| CAAGAATGGCCATGTATAGA+AGG | + | chr4.1:18355509-18355528 | None:intergenic | 40.0% | |
| CAAGTTCTCGTTGGATTTGA+AGG | - | chr4.1:18353562-18353581 | MS.gene36485:CDS | 40.0% | |
| CATACTTATCAATGCAGGTG+AGG | - | chr4.1:18356525-18356544 | MS.gene36485:CDS | 40.0% | |
| CATGGAAAGAAAACTGACAG+AGG | - | chr4.1:18356634-18356653 | MS.gene36485:intron | 40.0% | |
| CCCATATATGGAACTGTAAG+TGG | - | chr4.1:18356168-18356187 | MS.gene36485:intron | 40.0% | |
| CCCCATAAGAAAAGTTGGAA+GGG | + | chr4.1:18357346-18357365 | None:intergenic | 40.0% | |
| CCGTAACTATTGCTAAAGCT+GGG | - | chr4.1:18356097-18356116 | MS.gene36485:CDS | 40.0% | |
| CTCTTCCAAACTTGACTTTG+TGG | - | chr4.1:18356254-18356273 | MS.gene36485:intron | 40.0% | |
| CTTCTATACATGGCCATTCT+TGG | - | chr4.1:18355507-18355526 | MS.gene36485:CDS | 40.0% | |
| GAATGCAAAGTCAAATGCGA+AGG | - | chr4.1:18356989-18357008 | MS.gene36485:CDS | 40.0% | |
| GAGAAAGAAGGTTAGAAGCT+GGG | - | chr4.1:18355974-18355993 | MS.gene36485:intron | 40.0% | |
| GATCTTGTGATTACCCTTGT+GGG | + | chr4.1:18354964-18354983 | None:intergenic | 40.0% | |
| GATTATGGGTTCATTCATGC+TGG | - | chr4.1:18354789-18354808 | MS.gene36485:CDS | 40.0% | |
| GCCACTTACAGTTCCATATA+TGG | + | chr4.1:18356172-18356191 | None:intergenic | 40.0% | |
| GCTATGATATCCACTGTTCT+TGG | + | chr4.1:18355159-18355178 | None:intergenic | 40.0% | |
| GCTTCAATTCTGCATGTCAA+TGG | + | chr4.1:18358323-18358342 | None:intergenic | 40.0% | |
| GGATACTAGTGTAGCGAATA+CGG | + | chr4.1:18358514-18358533 | None:intergenic | 40.0% | |
| GTGCGGGTTCTTATGTTTAA+GGG | - | chr4.1:18354141-18354160 | MS.gene36485:CDS | 40.0% | |
| GTGGAGAAGAACCTAAAGAA+TGG | - | chr4.1:18355566-18355585 | MS.gene36485:CDS | 40.0% | |
| TACTGATAGCCTGTTTGGAT+TGG | + | chr4.1:18354064-18354083 | None:intergenic | 40.0% | |
| TAGCCATATCAACTACTGGT+CGG | - | chr4.1:18355819-18355838 | MS.gene36485:CDS | 40.0% | |
| TATTCGCTACACTAGTATCC+AGG | - | chr4.1:18358514-18358533 | MS.gene36485:intron | 40.0% | |
| TCACTTGCACCTTCTATACA+TGG | - | chr4.1:18355497-18355516 | MS.gene36485:CDS | 40.0% | |
| TCCCCTTCCTTCAAATACTT+TGG | + | chr4.1:18353541-18353560 | None:intergenic | 40.0% | |
| TCGAATAAGCCAATCCAAAC+AGG | - | chr4.1:18354052-18354071 | MS.gene36485:CDS | 40.0% | |
| TGCAAGATATGGAAGAGAAG+AGG | - | chr4.1:18356564-18356583 | MS.gene36485:intron | 40.0% | |
| TGCATTATGCTAGAGGATAG+TGG | - | chr4.1:18354655-18354674 | MS.gene36485:intron | 40.0% | |
| TGCTTATCTACCTCCATCAA+TGG | + | chr4.1:18356456-18356475 | None:intergenic | 40.0% | |
| TGTGCGGGTTCTTATGTTTA+AGG | - | chr4.1:18354140-18354159 | MS.gene36485:CDS | 40.0% | |
| TGTTTGTATCCAGACTCACT+TGG | - | chr4.1:18354539-18354558 | MS.gene36485:intron | 40.0% | |
| TTGAAACCTGGAAGGACAAA+TGG | + | chr4.1:18357727-18357746 | None:intergenic | 40.0% | |
| TTGAGCCCCATAAGAAAAGT+TGG | + | chr4.1:18357351-18357370 | None:intergenic | 40.0% | |
| TTGGTCAATGGTCAATGATC+TGG | - | chr4.1:18354184-18354203 | MS.gene36485:intron | 40.0% | |
| ! | ACCAGTAGTTGATATGGCTA+AGG | + | chr4.1:18355819-18355838 | None:intergenic | 40.0% |
| ! | CCAGTAGTTGATATGGCTAA+GGG | + | chr4.1:18355818-18355837 | None:intergenic | 40.0% |
| ! | CCCAGCTTTAGCAATAGTTA+CGG | + | chr4.1:18356100-18356119 | None:intergenic | 40.0% |
| ! | CCCTTCCAACTTTTCTTATG+GGG | - | chr4.1:18357343-18357362 | MS.gene36485:intron | 40.0% |
| ! | TTTATTGATGCTTGGTGGAG+TGG | - | chr4.1:18355547-18355566 | MS.gene36485:CDS | 40.0% |
| !! | ATCAGACTTTGAAACCTGGA+AGG | + | chr4.1:18357735-18357754 | None:intergenic | 40.0% |
| !! | ATTTTCAGGAACTTCCTGCA+TGG | + | chr4.1:18355118-18355137 | None:intergenic | 40.0% |
| !! | CAACATCAGACTTTGAAACC+TGG | + | chr4.1:18357739-18357758 | None:intergenic | 40.0% |
| !!! | CCGCAATTGGTGTTATCTTT+TGG | - | chr4.1:18354726-18354745 | MS.gene36485:intron | 40.0% |
| AACGAAATCGATGCATACGC+AGG | + | chr4.1:18356430-18356449 | None:intergenic | 45.0% | |
| AACGAGCATTAAGTGAGGCA+TGG | + | chr4.1:18356125-18356144 | None:intergenic | 45.0% | |
| AATGCATAACATGCCACCCA+AGG | + | chr4.1:18354641-18354660 | None:intergenic | 45.0% | |
| ACTAGTGTAGCGAATACGGA+TGG | + | chr4.1:18358510-18358529 | None:intergenic | 45.0% | |
| ACTGCAACGAGCATTAAGTG+AGG | + | chr4.1:18356130-18356149 | None:intergenic | 45.0% | |
| ACTTAATGCTCGTTGCAGTG+TGG | - | chr4.1:18356131-18356150 | MS.gene36485:CDS | 45.0% | |
| ACTTATCAATGCAGGTGAGG+CGG | - | chr4.1:18356528-18356547 | MS.gene36485:CDS | 45.0% | |
| AGATGTTGACGATTAAGCGG+CGG | + | chr4.1:18353329-18353348 | None:intergenic | 45.0% | |
| AGCCATATCAACTACTGGTC+GGG | - | chr4.1:18355820-18355839 | MS.gene36485:CDS | 45.0% | |
| AGCGCATATGCTGACCAAAT+AGG | + | chr4.1:18358355-18358374 | None:intergenic | 45.0% | |
| AGTTGAGACTTGGCAACAGA+TGG | + | chr4.1:18355770-18355789 | None:intergenic | 45.0% | |
| ATGTTATGCAGGCAGAGGTA+AGG | - | chr4.1:18354452-18354471 | MS.gene36485:intron | 45.0% | |
| CACTAGCTAGCAACACTGTT+TGG | + | chr4.1:18354013-18354032 | None:intergenic | 45.0% | |
| CACTCATAGGTTCTCTCGTA+AGG | - | chr4.1:18354830-18354849 | MS.gene36485:intron | 45.0% | |
| CAGGATCTGTTTATCCCACA+AGG | - | chr4.1:18354947-18354966 | MS.gene36485:CDS | 45.0% | |
| CCCTTAGCCATATCAACTAC+TGG | - | chr4.1:18355815-18355834 | MS.gene36485:CDS | 45.0% | |
| CGATTTCGTTCTGCCATTGA+TGG | - | chr4.1:18356440-18356459 | MS.gene36485:CDS | 45.0% | |
| CGGAGATGTTGACGATTAAG+CGG | + | chr4.1:18353332-18353351 | None:intergenic | 45.0% | |
| GAAAATGATGGTCCTGACCA+TGG | - | chr4.1:18357872-18357891 | MS.gene36485:intron | 45.0% | |
| GAATCTCCATTTGTCCTTCC+AGG | - | chr4.1:18357718-18357737 | MS.gene36485:intron | 45.0% | |
| GCAGCTGCAAATCCCATATA+TGG | - | chr4.1:18356156-18356175 | MS.gene36485:CDS | 45.0% | |
| GCAGTGTGAATGGTGTATTC+AGG | - | chr4.1:18355265-18355284 | MS.gene36485:CDS | 45.0% | |
| GCATCCTCTATGTCTGCAAT+AGG | + | chr4.1:18358398-18358417 | None:intergenic | 45.0% | |
| GCCCCATAAGAAAAGTTGGA+AGG | + | chr4.1:18357347-18357366 | None:intergenic | 45.0% | |
| GCGATCGTGTAGCTATTGTT+GGG | - | chr4.1:18355211-18355230 | MS.gene36485:CDS | 45.0% | |
| GCGCATATGCTGACCAAATA+GGG | + | chr4.1:18358354-18358373 | None:intergenic | 45.0% | |
| GCTCTTCCAGGAAAAAGCAA+AGG | - | chr4.1:18355243-18355262 | MS.gene36485:CDS | 45.0% | |
| GGAGAAAGAAGGTTAGAAGC+TGG | - | chr4.1:18355973-18355992 | MS.gene36485:intron | 45.0% | |
| GGATCTTGTGATTACCCTTG+TGG | + | chr4.1:18354965-18354984 | None:intergenic | 45.0% | |
| GGGATATATAAGGCTCTTCC+AGG | - | chr4.1:18355231-18355250 | MS.gene36485:CDS | 45.0% | |
| GTAACTCGGCGAGAAACAAA+AGG | + | chr4.1:18353589-18353608 | None:intergenic | 45.0% | |
| GTGGGATAAACAGATCCTGT+GGG | + | chr4.1:18354946-18354965 | None:intergenic | 45.0% | |
| GTTCAATAAAGCAAGGGCAG+AGG | + | chr4.1:18355318-18355337 | None:intergenic | 45.0% | |
| GTTCCTGAAAATTCTGCACC+TGG | - | chr4.1:18355126-18355145 | MS.gene36485:intron | 45.0% | |
| TACATCTGCAGAGCTGTAAG+TGG | + | chr4.1:18358441-18358460 | None:intergenic | 45.0% | |
| TAGACATGTTATGCAGGCAG+AGG | - | chr4.1:18354447-18354466 | MS.gene36485:intron | 45.0% | |
| TAGCTCAACATCAGATGCCA+TGG | - | chr4.1:18358156-18358175 | MS.gene36485:intron | 45.0% | |
| TATGCATTTGGCACCCTCAT+TGG | - | chr4.1:18357602-18357621 | MS.gene36485:intron | 45.0% | |
| TCACAATAGCCATTCAGGTG+TGG | + | chr4.1:18356862-18356881 | None:intergenic | 45.0% | |
| TCAGGTGTGGCAATAGCAAA+AGG | + | chr4.1:18356849-18356868 | None:intergenic | 45.0% | |
| TCATCAAACCTTGTCCATGC+AGG | - | chr4.1:18355101-18355120 | MS.gene36485:intron | 45.0% | |
| TGATTGATTGCTGTGGATGC+AGG | - | chr4.1:18355345-18355364 | MS.gene36485:CDS | 45.0% | |
| TGCTCTCAAGAGTTGAGACT+TGG | + | chr4.1:18355780-18355799 | None:intergenic | 45.0% | |
| TGGCAGTTGAAAGACCTTTC+AGG | + | chr4.1:18358226-18358245 | None:intergenic | 45.0% | |
| TGTATCCAGACTCACTTGGT+TGG | - | chr4.1:18354543-18354562 | MS.gene36485:intron | 45.0% | |
| TGTGGGATAAACAGATCCTG+TGG | + | chr4.1:18354947-18354966 | None:intergenic | 45.0% | |
| TTTCGTTCTGCCATTGATGG+AGG | - | chr4.1:18356443-18356462 | MS.gene36485:CDS | 45.0% | |
| ! | AACGTTTTGCAGCCCAAAAG+TGG | - | chr4.1:18357369-18357388 | MS.gene36485:intron | 45.0% |
| ! | AACTTGCTTGTGACCGAGTA+TGG | - | chr4.1:18355060-18355079 | MS.gene36485:intron | 45.0% |
| ! | AGGTTCTATGGTTTGTGTCG+AGG | - | chr4.1:18353636-18353655 | MS.gene36485:intron | 45.0% |
| ! | CATGATGGGAGTGCAAGATA+TGG | - | chr4.1:18356553-18356572 | MS.gene36485:intron | 45.0% |
| ! | GGTTCTATGGTTTGTGTCGA+GGG | - | chr4.1:18353637-18353656 | MS.gene36485:intron | 45.0% |
| ! | TCTAATTTGGGTTTGCCCAC+AGG | - | chr4.1:18354928-18354947 | MS.gene36485:CDS | 45.0% |
| ! | TGACCAGGTGCAGAATTTTC+AGG | + | chr4.1:18355132-18355151 | None:intergenic | 45.0% |
| ! | TTGCTATTGCCACACCTGAA+TGG | - | chr4.1:18356850-18356869 | MS.gene36485:CDS | 45.0% |
| ! | TTTGAAGTTGCTGGGATGTG+CGG | - | chr4.1:18354124-18354143 | MS.gene36485:CDS | 45.0% |
| !! | GAGCAGAAAGGTACTGTACT+TGG | - | chr4.1:18357177-18357196 | MS.gene36485:intron | 45.0% |
| !! | TGAGGTATCGTCTACTTCCA+TGG | + | chr4.1:18358176-18358195 | None:intergenic | 45.0% |
| !!! | ACACTGCCTTTGCTTTTTCC+TGG | + | chr4.1:18355252-18355271 | None:intergenic | 45.0% |
| !!! | ATATTTGATAATTTAAATTT+GGG | + | chr4.1:18354417-18354436 | None:intergenic | 5.0% |
| !!! | TATATTTGATAATTTAAATT+TGG | + | chr4.1:18354418-18354437 | None:intergenic | 5.0% |
| AAGGTTAGAAGCTGGGGCAA+TGG | - | chr4.1:18355981-18356000 | MS.gene36485:intron | 50.0% | |
| ACAATAGCTACACGATCGCC+AGG | + | chr4.1:18355210-18355229 | None:intergenic | 50.0% | |
| ACTTCCGCGACTTAGGAAAC+AGG | - | chr4.1:18353361-18353380 | MS.gene36485:intron | 50.0% | |
| AGAAGAGAGGGAAAGGGAAC+TGG | - | chr4.1:18357826-18357845 | MS.gene36485:intron | 50.0% | |
| AGCGTGAAGAAGAGAGGGAA+AGG | - | chr4.1:18357819-18357838 | MS.gene36485:intron | 50.0% | |
| AGGAACTTCCTGCATGGACA+AGG | + | chr4.1:18355112-18355131 | None:intergenic | 50.0% | |
| AGGGCTGACGGTGAAAATGA+TGG | - | chr4.1:18357860-18357879 | MS.gene36485:intron | 50.0% | |
| AGGTCTTCAGGGCTGTAGAT+TGG | + | chr4.1:18355422-18355441 | None:intergenic | 50.0% | |
| AGGTTCTCTCGTAAGGCCAA+AGG | - | chr4.1:18354837-18354856 | MS.gene36485:intron | 50.0% | |
| AGTGAGACCAACAGCAGGTT+GGG | + | chr4.1:18358203-18358222 | None:intergenic | 50.0% | |
| CAGGCTTGCAAGAATCAACG+AGG | + | chr4.1:18355191-18355210 | None:intergenic | 50.0% | |
| CGAACCTGTTTCCTAAGTCG+CGG | + | chr4.1:18353368-18353387 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCA+AGG | - | chr4.1:18358561-18358580 | MS.gene36485:CDS | 50.0% | |
| GAAGGGGAACAAGTTCTCGT+TGG | - | chr4.1:18353553-18353572 | MS.gene36485:CDS | 50.0% | |
| GATGCTATCAATAGAGGGGC+AGG | - | chr4.1:18358413-18358432 | MS.gene36485:CDS | 50.0% | |
| GCAATGGTTCTTGCTGACAG+AGG | - | chr4.1:18355997-18356016 | MS.gene36485:intron | 50.0% | |
| GCAGGACGTGCTCTGATATT+TGG | + | chr4.1:18356412-18356431 | None:intergenic | 50.0% | |
| GCCATATCAACTACTGGTCG+GGG | - | chr4.1:18355821-18355840 | MS.gene36485:CDS | 50.0% | |
| GCGTGAAGAAGAGAGGGAAA+GGG | - | chr4.1:18357820-18357839 | MS.gene36485:intron | 50.0% | |
| GGATGAGCGTGAAGAAGAGA+GGG | - | chr4.1:18357814-18357833 | MS.gene36485:intron | 50.0% | |
| GGCGATCGTGTAGCTATTGT+TGG | - | chr4.1:18355210-18355229 | MS.gene36485:CDS | 50.0% | |
| GTAATATCACCTCGTCGGTC+AGG | + | chr4.1:18356735-18356754 | None:intergenic | 50.0% | |
| GTGATTGTGTTCAGCACTCG+TGG | - | chr4.1:18357690-18357709 | MS.gene36485:intron | 50.0% | |
| TAATGCTCGTTGCAGTGTGG+TGG | - | chr4.1:18356134-18356153 | MS.gene36485:CDS | 50.0% | |
| TGGATGAGCGTGAAGAAGAG+AGG | - | chr4.1:18357813-18357832 | MS.gene36485:intron | 50.0% | |
| TTCCTAAGTCGCGGAAGTTG+TGG | + | chr4.1:18353359-18353378 | None:intergenic | 50.0% | |
| TTGAAGTTGCTGGGATGTGC+GGG | - | chr4.1:18354125-18354144 | MS.gene36485:CDS | 50.0% | |
| ! | ACCCCGACCAGTAGTTGATA+TGG | + | chr4.1:18355825-18355844 | None:intergenic | 50.0% |
| ! | CTGTTGGTCTCACTCCTGAA+AGG | - | chr4.1:18358209-18358228 | MS.gene36485:intron | 50.0% |
| !! | CTCGTTGATTCTTGCAAGCC+TGG | - | chr4.1:18355189-18355208 | MS.gene36485:CDS | 50.0% |
| ACTACTGGTCGGGGTTCTTC+TGG | - | chr4.1:18355830-18355849 | MS.gene36485:CDS | 55.0% | |
| ACTGTTCTTGGGAGCTGACC+AGG | + | chr4.1:18355147-18355166 | None:intergenic | 55.0% | |
| AGAGGGAAAGGGAACTGGAG+AGG | - | chr4.1:18357831-18357850 | MS.gene36485:intron | 55.0% | |
| ATCGCGGCTTGTGAAGCTTC+CGG | + | chr4.1:18354893-18354912 | None:intergenic | 55.0% | |
| CTACTGGTCGGGGTTCTTCT+GGG | - | chr4.1:18355831-18355850 | MS.gene36485:CDS | 55.0% | |
| CTCCACAACTTCCGCGACTT+AGG | - | chr4.1:18353354-18353373 | MS.gene36485:intron | 55.0% | |
| CTTGTGAAGCTTCCGGTGGT+GGG | + | chr4.1:18354886-18354905 | None:intergenic | 55.0% | |
| GAAGATCCCTCGGCGTAACT+CGG | + | chr4.1:18353603-18353622 | None:intergenic | 55.0% | |
| GAGTGAGACCAACAGCAGGT+TGG | + | chr4.1:18358204-18358223 | None:intergenic | 55.0% | |
| GCAATCTGCTCAGATGCCTG+TGG | + | chr4.1:18356948-18356967 | None:intergenic | 55.0% | |
| GCATATGCGCTCCAACCGTT+TGG | - | chr4.1:18358364-18358383 | MS.gene36485:CDS | 55.0% | |
| GCGGTTACCGAAGTTGTTCG+TGG | - | chr4.1:18353508-18353527 | MS.gene36485:CDS | 55.0% | |
| GTCGCGGAAGTTGTGGAGAT+CGG | + | chr4.1:18353352-18353371 | None:intergenic | 55.0% | |
| GTTCATTTCTGCCCCACCAC+CGG | - | chr4.1:18354871-18354890 | MS.gene36485:intron | 55.0% | |
| TACTGGTCGGGGTTCTTCTG+GGG | - | chr4.1:18355832-18355851 | MS.gene36485:CDS | 55.0% | |
| TCAGAAGCCCAACCTGCTGT+TGG | - | chr4.1:18358193-18358212 | MS.gene36485:intron | 55.0% | |
| TCAGGAGTGAGACCAACAGC+AGG | + | chr4.1:18358208-18358227 | None:intergenic | 55.0% | |
| TGGTCAGCTCCCAAGAACAG+TGG | - | chr4.1:18355146-18355165 | MS.gene36485:intron | 55.0% | |
| TTGTGAAGCTTCCGGTGGTG+GGG | + | chr4.1:18354885-18354904 | None:intergenic | 55.0% | |
| ! | AACAGCAGGTTGGGCTTCTG+AGG | + | chr4.1:18358194-18358213 | None:intergenic | 55.0% |
| ! | GGAACTGGAGAGGAAGCGTA+GGG | - | chr4.1:18357841-18357860 | MS.gene36485:intron | 55.0% |
| ATCACCTCGTCGGTCAGGTC+AGG | + | chr4.1:18356730-18356749 | None:intergenic | 60.0% | |
| CAGGTGAGGCGGCACATGAT+GGG | - | chr4.1:18356539-18356558 | MS.gene36485:intron | 60.0% | |
| CCAGTCTGCACAAAGCCAGC+AGG | + | chr4.1:18357082-18357101 | None:intergenic | 60.0% | |
| CCTGAGCTCAGCGTATGCTG+CGG | + | chr4.1:18356970-18356989 | None:intergenic | 60.0% | |
| CGATTAAGCGGCGGCGTTTG+TGG | + | chr4.1:18353320-18353339 | None:intergenic | 60.0% | |
| GCTTGTGAAGCTTCCGGTGG+TGG | + | chr4.1:18354887-18354906 | None:intergenic | 60.0% | |
| TCAACCTGACCTGACCGACG+AGG | - | chr4.1:18356723-18356742 | MS.gene36485:CDS | 60.0% | |
| TTCTCGCCGAGTTACGCCGA+GGG | - | chr4.1:18353594-18353613 | MS.gene36485:intron | 60.0% | |
| TTTCTCGCCGAGTTACGCCG+AGG | - | chr4.1:18353593-18353612 | MS.gene36485:intron | 60.0% | |
| ! | GAGAGGAAGCGTAGGGCTGA+CGG | - | chr4.1:18357848-18357867 | MS.gene36485:intron | 60.0% |
| ! | GGGAACTGGAGAGGAAGCGT+AGG | - | chr4.1:18357840-18357859 | MS.gene36485:intron | 60.0% |
| !! | CCTGCTGGCTTTGTGCAGAC+TGG | - | chr4.1:18357079-18357098 | MS.gene36485:intron | 60.0% |
| !! | GCTGGCTTTGTGCAGACTGG+AGG | - | chr4.1:18357082-18357101 | MS.gene36485:intron | 60.0% |
| CCGCAGCATACGCTGAGCTC+AGG | - | chr4.1:18356967-18356986 | MS.gene36485:CDS | 65.0% | |
| GCAGGTGAGGCGGCACATGA+TGG | - | chr4.1:18356538-18356557 | MS.gene36485:CDS | 65.0% | |
| GCGGCTTGTGAAGCTTCCGG+TGG | + | chr4.1:18354890-18354909 | None:intergenic | 65.0% | |
| !! | GGTCGGGGTTCTTCTGGGGT+TGG | - | chr4.1:18355836-18355855 | MS.gene36485:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18353110 | 18358814 | 18353110 | ID=MS.gene36485 |
| chr4.1 | mRNA | 18353110 | 18358814 | 18353110 | ID=MS.gene36485.t1;Parent=MS.gene36485 |
| chr4.1 | exon | 18358749 | 18358814 | 18358749 | ID=MS.gene36485.t1.exon1;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18358749 | 18358814 | 18358749 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18358542 | 18358651 | 18358542 | ID=MS.gene36485.t1.exon2;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18358542 | 18358651 | 18358542 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18358251 | 18358459 | 18358251 | ID=MS.gene36485.t1.exon3;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18358251 | 18358459 | 18358251 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18356955 | 18357085 | 18356955 | ID=MS.gene36485.t1.exon4;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18356955 | 18357085 | 18356955 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18356638 | 18356876 | 18356638 | ID=MS.gene36485.t1.exon5;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18356638 | 18356876 | 18356638 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18356321 | 18356557 | 18356321 | ID=MS.gene36485.t1.exon6;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18356321 | 18356557 | 18356321 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18356031 | 18356185 | 18356031 | ID=MS.gene36485.t1.exon7;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18356031 | 18356185 | 18356031 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18355742 | 18355950 | 18355742 | ID=MS.gene36485.t1.exon8;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18355742 | 18355950 | 18355742 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18355460 | 18355625 | 18355460 | ID=MS.gene36485.t1.exon9;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18355460 | 18355625 | 18355460 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18355180 | 18355382 | 18355180 | ID=MS.gene36485.t1.exon10;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18355180 | 18355382 | 18355180 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18354914 | 18354973 | 18354914 | ID=MS.gene36485.t1.exon11;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18354914 | 18354973 | 18354914 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18354738 | 18354827 | 18354738 | ID=MS.gene36485.t1.exon12;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18354738 | 18354827 | 18354738 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18354012 | 18354184 | 18354012 | ID=MS.gene36485.t1.exon13;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18354012 | 18354184 | 18354012 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18353694 | 18353765 | 18353694 | ID=MS.gene36485.t1.exon14;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18353694 | 18353765 | 18353694 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18353449 | 18353590 | 18353449 | ID=MS.gene36485.t1.exon15;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18353449 | 18353590 | 18353449 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| chr4.1 | exon | 18353110 | 18353169 | 18353110 | ID=MS.gene36485.t1.exon16;Parent=MS.gene36485.t1 |
| chr4.1 | CDS | 18353110 | 18353169 | 18353110 | ID=cds.MS.gene36485.t1;Parent=MS.gene36485.t1 |
| Gene Sequence |
| Protein sequence |