Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35150.t1 | XP_003608493.1 | 99.6 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35150.t1 | Q9FL33 | 76.5 | 786 | 161 | 9 | 1 | 772 | 1 | 776 | 0.0e+00 | 1090.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35150.t1 | G7JDY9 | 99.6 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene35150 | 0.8655 | 5.65E-65 | -1.69E-46 |
| MS.gene049596 | MS.gene35150 | 0.819983 | 8.72E-53 | -1.69E-46 |
| MS.gene049622 | MS.gene35150 | 0.823924 | 1.07E-53 | -1.69E-46 |
| MS.gene049660 | MS.gene35150 | 0.805461 | 1.32E-49 | -1.69E-46 |
| MS.gene04985 | MS.gene35150 | 0.847667 | 1.00E-59 | -1.69E-46 |
| MS.gene049989 | MS.gene35150 | 0.910413 | 1.93E-82 | -1.69E-46 |
| MS.gene050297 | MS.gene35150 | 0.869641 | 2.66E-66 | -1.69E-46 |
| MS.gene05054 | MS.gene35150 | 0.813824 | 2.11E-51 | -1.69E-46 |
| MS.gene050648 | MS.gene35150 | 0.844329 | 8.09E-59 | -1.69E-46 |
| MS.gene051087 | MS.gene35150 | 0.801658 | 8.11E-49 | -1.69E-46 |
| MS.gene051094 | MS.gene35150 | 0.82689 | 2.12E-54 | -1.69E-46 |
| MS.gene05124 | MS.gene35150 | 0.826041 | 3.37E-54 | -1.69E-46 |
| MS.gene051263 | MS.gene35150 | 0.822521 | 2.27E-53 | -1.69E-46 |
| MS.gene051339 | MS.gene35150 | 0.806409 | 8.34E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene35150 | 0.834112 | 3.62E-56 | -1.69E-46 |
| MS.gene051629 | MS.gene35150 | 0.839419 | 1.60E-57 | -1.69E-46 |
| MS.gene051742 | MS.gene35150 | 0.823569 | 1.29E-53 | -1.69E-46 |
| MS.gene051816 | MS.gene35150 | 0.86893 | 4.53E-66 | -1.69E-46 |
| MS.gene051896 | MS.gene35150 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene051914 | MS.gene35150 | 0.808824 | 2.56E-50 | -1.69E-46 |
| MS.gene051955 | MS.gene35150 | 0.843505 | 1.34E-58 | -1.69E-46 |
| MS.gene052143 | MS.gene35150 | 0.831999 | 1.21E-55 | -1.69E-46 |
| MS.gene052308 | MS.gene35150 | 0.851008 | 1.17E-60 | -1.69E-46 |
| MS.gene052367 | MS.gene35150 | 0.887145 | 1.85E-72 | -1.69E-46 |
| MS.gene053173 | MS.gene35150 | 0.880656 | 4.58E-70 | -1.69E-46 |
| MS.gene053348 | MS.gene35150 | 0.882875 | 7.22E-71 | -1.69E-46 |
| MS.gene053416 | MS.gene35150 | 0.891785 | 2.89E-74 | -1.69E-46 |
| MS.gene053417 | MS.gene35150 | 0.890723 | 7.61E-74 | -1.69E-46 |
| MS.gene05369 | MS.gene35150 | 0.829258 | 5.69E-55 | -1.69E-46 |
| MS.gene053929 | MS.gene35150 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene054551 | MS.gene35150 | 0.884354 | 2.06E-71 | -1.69E-46 |
| MS.gene054552 | MS.gene35150 | 0.84887 | 4.65E-60 | -1.69E-46 |
| MS.gene054593 | MS.gene35150 | 0.873086 | 1.93E-67 | -1.69E-46 |
| MS.gene054633 | MS.gene35150 | 0.805396 | 1.36E-49 | -1.69E-46 |
| MS.gene054885 | MS.gene35150 | 0.839937 | 1.17E-57 | -1.69E-46 |
| MS.gene055308 | MS.gene35150 | 0.891631 | 3.33E-74 | -1.69E-46 |
| MS.gene055411 | MS.gene35150 | 0.821429 | 4.06E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene35150 | 0.879263 | 1.44E-69 | -1.69E-46 |
| MS.gene055579 | MS.gene35150 | 0.817412 | 3.34E-52 | -1.69E-46 |
| MS.gene055957 | MS.gene35150 | 0.899096 | 2.78E-77 | -1.69E-46 |
| MS.gene056041 | MS.gene35150 | 0.924373 | 7.68E-90 | -1.69E-46 |
| MS.gene056042 | MS.gene35150 | 0.859188 | 4.92E-63 | -1.69E-46 |
| MS.gene056228 | MS.gene35150 | 0.80423 | 2.39E-49 | -1.69E-46 |
| MS.gene05640 | MS.gene35150 | 0.888643 | 4.92E-73 | -1.69E-46 |
| MS.gene056520 | MS.gene35150 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene056526 | MS.gene35150 | 0.883868 | 3.12E-71 | -1.69E-46 |
| MS.gene056528 | MS.gene35150 | 0.84114 | 5.69E-58 | -1.69E-46 |
| MS.gene05652 | MS.gene35150 | 0.802963 | 4.37E-49 | -1.69E-46 |
| MS.gene057358 | MS.gene35150 | 0.809191 | 2.14E-50 | -1.69E-46 |
| MS.gene057367 | MS.gene35150 | 0.803787 | 2.95E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene35150 | 0.874284 | 7.61E-68 | -1.69E-46 |
| MS.gene057483 | MS.gene35150 | 0.814837 | 1.26E-51 | -1.69E-46 |
| MS.gene058128 | MS.gene35150 | 0.837677 | 4.51E-57 | -1.69E-46 |
| MS.gene058196 | MS.gene35150 | 0.857457 | 1.61E-62 | -1.69E-46 |
| MS.gene058197 | MS.gene35150 | 0.848651 | 5.35E-60 | -1.69E-46 |
| MS.gene058198 | MS.gene35150 | 0.850088 | 2.13E-60 | -1.69E-46 |
| MS.gene058478 | MS.gene35150 | 0.812379 | 4.37E-51 | -1.69E-46 |
| MS.gene058818 | MS.gene35150 | 0.822869 | 1.88E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene35150 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene058828 | MS.gene35150 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene058849 | MS.gene35150 | 0.81814 | 2.29E-52 | -1.69E-46 |
| MS.gene058853 | MS.gene35150 | 0.846115 | 2.66E-59 | -1.69E-46 |
| MS.gene059300 | MS.gene35150 | 0.877587 | 5.58E-69 | -1.69E-46 |
| MS.gene059553 | MS.gene35150 | 0.871869 | 4.92E-67 | -1.69E-46 |
| MS.gene060473 | MS.gene35150 | 0.915826 | 3.71E-85 | -1.69E-46 |
| MS.gene060565 | MS.gene35150 | 0.901574 | 2.33E-78 | -1.69E-46 |
| MS.gene06057 | MS.gene35150 | 0.863264 | 2.82E-64 | -1.69E-46 |
| MS.gene06064 | MS.gene35150 | 0.806206 | 9.20E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene35150 | 0.902499 | 9.11E-79 | -1.69E-46 |
| MS.gene061099 | MS.gene35150 | 0.861031 | 1.37E-63 | -1.69E-46 |
| MS.gene061260 | MS.gene35150 | 0.911645 | 4.81E-83 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35150.t1 | MTR_4g096700 | 99.612 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1586 |
| MS.gene35150.t1 | MTR_7g109480 | 34.956 | 678 | 352 | 13 | 9 | 643 | 12 | 643 | 1.36e-115 | 366 |
| MS.gene35150.t1 | MTR_4g071090 | 33.385 | 650 | 356 | 12 | 28 | 653 | 155 | 751 | 9.46e-108 | 348 |
| MS.gene35150.t1 | MTR_4g122270 | 34.837 | 643 | 377 | 12 | 5 | 638 | 210 | 819 | 3.15e-101 | 333 |
| MS.gene35150.t1 | MTR_8g090000 | 30.936 | 737 | 392 | 16 | 28 | 707 | 37 | 713 | 1.50e-98 | 324 |
| MS.gene35150.t1 | MTR_4g116870 | 34.173 | 635 | 340 | 15 | 38 | 641 | 61 | 648 | 7.50e-96 | 314 |
| MS.gene35150.t1 | MTR_2g437540 | 30.055 | 722 | 392 | 15 | 14 | 679 | 20 | 684 | 1.80e-94 | 313 |
| MS.gene35150.t1 | MTR_7g100680 | 34.233 | 593 | 314 | 17 | 109 | 649 | 144 | 712 | 4.62e-89 | 298 |
| MS.gene35150.t1 | MTR_2g009190 | 32.386 | 528 | 301 | 11 | 117 | 635 | 128 | 608 | 3.28e-70 | 243 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35150.t1 | AT5G46280 | 74.589 | 791 | 167 | 11 | 1 | 772 | 1 | 776 | 0.0 | 1179 |
| MS.gene35150.t1 | AT5G46280 | 81.346 | 654 | 110 | 6 | 1 | 652 | 1 | 644 | 0.0 | 1098 |
| MS.gene35150.t1 | AT5G46280 | 81.717 | 629 | 103 | 6 | 1 | 627 | 1 | 619 | 0.0 | 1057 |
| MS.gene35150.t1 | AT5G46280 | 81.552 | 580 | 95 | 6 | 1 | 578 | 1 | 570 | 0.0 | 976 |
| MS.gene35150.t1 | AT4G02060 | 36.377 | 668 | 332 | 14 | 17 | 641 | 19 | 636 | 2.74e-120 | 378 |
| MS.gene35150.t1 | AT4G02060 | 36.377 | 668 | 332 | 14 | 17 | 641 | 19 | 636 | 2.74e-120 | 378 |
| MS.gene35150.t1 | AT2G16440 | 34.557 | 654 | 358 | 10 | 11 | 642 | 143 | 748 | 4.19e-110 | 355 |
| MS.gene35150.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 208 | 821 | 4.08e-104 | 341 |
| MS.gene35150.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 210 | 823 | 4.38e-104 | 341 |
| MS.gene35150.t1 | AT2G07690 | 35.837 | 639 | 327 | 16 | 33 | 639 | 53 | 640 | 4.43e-104 | 336 |
| MS.gene35150.t1 | AT2G07690 | 35.793 | 637 | 328 | 16 | 33 | 639 | 53 | 638 | 2.33e-103 | 334 |
| MS.gene35150.t1 | AT5G44635 | 30.882 | 748 | 390 | 16 | 19 | 701 | 29 | 714 | 1.66e-96 | 318 |
| MS.gene35150.t1 | AT5G44635 | 30.882 | 748 | 390 | 16 | 19 | 701 | 29 | 714 | 3.92e-96 | 318 |
| MS.gene35150.t1 | AT3G09660 | 31.269 | 646 | 380 | 13 | 106 | 711 | 143 | 764 | 1.19e-90 | 302 |
| MS.gene35150.t1 | AT3G09660 | 33.048 | 584 | 333 | 11 | 106 | 649 | 143 | 708 | 1.60e-90 | 301 |
| MS.gene35150.t1 | AT3G09660 | 31.424 | 646 | 382 | 12 | 106 | 711 | 143 | 767 | 2.69e-90 | 301 |
| MS.gene35150.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.00e-64 | 228 |
| MS.gene35150.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.14e-64 | 228 |
Find 181 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCGACATTACATCTAATT+TGG | 0.103330 | 4.4:-19367854 | MS.gene35150:CDS |
| ACTACTGGTCGGGGTTCTTC+TGG | 0.126682 | 4.4:-19366936 | MS.gene35150:CDS |
| GATCTTCTTTCTGAATTTAT+AGG | 0.193496 | 4.4:-19369155 | MS.gene35150:CDS |
| GAAGCATTCAATTCCCTATT+TGG | 0.198726 | 4.4:-19364443 | MS.gene35150:CDS |
| GCAGGACGTGCTCTGATATT+TGG | 0.229377 | 4.4:+19366357 | None:intergenic |
| TTCTGAATTTATAGGTTCTA+TGG | 0.247965 | 4.4:-19369147 | MS.gene35150:CDS |
| CTTTCTGCTCAACTTCAATT+TGG | 0.261333 | 4.4:+19365602 | None:intergenic |
| CTACTGGTCGGGGTTCTTCT+GGG | 0.266254 | 4.4:-19366935 | MS.gene35150:CDS |
| CTTCTATACATGGCCATTCT+TGG | 0.268321 | 4.4:-19367262 | MS.gene35150:CDS |
| GCCACTTACAGTTCCATATA+TGG | 0.269512 | 4.4:+19366597 | None:intergenic |
| TCAAATGAGTTCCATTCTTT+AGG | 0.279773 | 4.4:+19367192 | None:intergenic |
| TCTAAAGTTCTGGCAGTTAT+TGG | 0.289117 | 4.4:+19365654 | None:intergenic |
| TGGCAGTTGAAAGACCTTTC+AGG | 0.304074 | 4.4:+19364558 | None:intergenic |
| CGCGACATTACATCTAATTT+GGG | 0.314962 | 4.4:-19367853 | MS.gene35150:CDS |
| AGCGCATATGCTGACCAAAT+AGG | 0.328388 | 4.4:+19364429 | None:intergenic |
| TATTATAGTTTCTAAAGTTC+TGG | 0.340428 | 4.4:+19365644 | None:intergenic |
| GCTATGATATCCACTGTTCT+TGG | 0.342887 | 4.4:+19367613 | None:intergenic |
| GCAGCTGCAAATCCCATATA+TGG | 0.344979 | 4.4:-19366610 | MS.gene35150:CDS |
| AACTTGCTTGTGACCGAGTA+TGG | 0.352631 | 4.4:-19367709 | MS.gene35150:CDS |
| AGAAGAGAGGGAAAGGGAAC+TGG | 0.357571 | 4.4:-19364955 | MS.gene35150:CDS |
| GAATCCTATGCTTAGCATAA+TGG | 0.359551 | 4.4:+19366064 | None:intergenic |
| TCCCCTTCCTTCAAATACTT+TGG | 0.360134 | 4.4:+19369233 | None:intergenic |
| CGATTTCGTTCGGCCATTGA+TGG | 0.364561 | 4.4:-19366326 | MS.gene35150:CDS |
| CGATTAAGCGGCGGCGTTTG+TGG | 0.368234 | 4.4:+19369454 | None:intergenic |
| GATATTTGGCGATCAATATC+AGG | 0.372045 | 4.4:+19366371 | None:intergenic |
| AGATGTATTGCTCCTGTTAG+AGG | 0.373970 | 4.4:-19364327 | MS.gene35150:intron |
| GGCGATCGTGTAGCTATTGT+TGG | 0.378452 | 4.4:-19367559 | MS.gene35150:CDS |
| CTCGTTGATTCTTGCAAGCC+TGG | 0.380513 | 4.4:-19367580 | MS.gene35150:CDS |
| CAAGTTCTCGTTGGATTTGA+AGG | 0.381551 | 4.4:-19369209 | MS.gene35150:CDS |
| TGATCTGTTGTTTATTGTGT+TGG | 0.388371 | 4.4:-19366405 | MS.gene35150:CDS |
| CTGCTTTCTTTATCCAAGAA+TGG | 0.398574 | 4.4:+19367249 | None:intergenic |
| CTATGATATCCACTGTTCTT+GGG | 0.402129 | 4.4:+19367614 | None:intergenic |
| GGGATATATAAGGCTCTTCC+AGG | 0.405737 | 4.4:-19367538 | MS.gene35150:CDS |
| TCAAAAGATGTACCTCTAAC+AGG | 0.409245 | 4.4:+19364315 | None:intergenic |
| CATGATGGGAGTGCAAGATA+TGG | 0.410032 | 4.4:-19366213 | MS.gene35150:CDS |
| ACCCCGACCAGTAGTTGATA+TGG | 0.413616 | 4.4:+19366944 | None:intergenic |
| GCTTGTGAAGCTTCCGGTGG+TGG | 0.414230 | 4.4:+19367885 | None:intergenic |
| ACATCCTCTATGTCTGCAAT+AGG | 0.414915 | 4.4:+19364386 | None:intergenic |
| CAAGAATGGCCATGTATAGA+AGG | 0.416117 | 4.4:+19367263 | None:intergenic |
| GCAGTGTGAATGGTGTATTC+AGG | 0.418297 | 4.4:-19367504 | MS.gene35150:intron |
| CTTGTGAAGCTTCCGGTGGT+GGG | 0.424475 | 4.4:+19367886 | None:intergenic |
| TCTAATTTGGGTTTGCCCAC+AGG | 0.425040 | 4.4:-19367841 | MS.gene35150:CDS |
| GTTTATTGTGTTGGACCAAA+TGG | 0.429107 | 4.4:-19366396 | MS.gene35150:CDS |
| GCGCATATGCTGACCAAATA+GGG | 0.430181 | 4.4:+19364430 | None:intergenic |
| AGGTCTTCAGGGCTGTAGAT+TGG | 0.430461 | 4.4:+19367350 | None:intergenic |
| AGCCATATCAACTACTGGTC+GGG | 0.431922 | 4.4:-19366946 | MS.gene35150:CDS |
| AGTGAGACCAACAGCAGGTT+GGG | 0.432976 | 4.4:+19364581 | None:intergenic |
| CCACTTACAGTTCCATATAT+GGG | 0.434161 | 4.4:+19366598 | None:intergenic |
| ATAGAGGATGTTATCAATAG+AGG | 0.435851 | 4.4:-19364374 | MS.gene35150:CDS |
| GTTACTTCAGATCAAGAAAC+AGG | 0.437032 | 4.4:-19366894 | MS.gene35150:intron |
| TCATAAAGAACTGACAGAAA+TGG | 0.437741 | 4.4:-19364988 | MS.gene35150:CDS |
| GTTGAGAAGAGATACATTGT+TGG | 0.438233 | 4.4:+19367388 | None:intergenic |
| GCATATGCGCTCCAACCGTT+TGG | 0.444476 | 4.4:-19364417 | MS.gene35150:CDS |
| CTCCACAACTTCCGCGACTT+AGG | 0.449467 | 4.4:-19369417 | MS.gene35150:CDS |
| ACTGTTCTTGGGAGCTGACC+AGG | 0.451812 | 4.4:+19367625 | None:intergenic |
| GGTTCTATGGTTTGTGTCGA+GGG | 0.452369 | 4.4:-19369134 | MS.gene35150:CDS |
| GGTCGGGGTTCTTCTGGGGT+TGG | 0.454303 | 4.4:-19366930 | MS.gene35150:CDS |
| ATCGCGGCTTGTGAAGCTTC+CGG | 0.460196 | 4.4:+19367879 | None:intergenic |
| AGCGTGAAGAAGAGAGGGAA+AGG | 0.461495 | 4.4:-19364962 | MS.gene35150:CDS |
| ACCGTAACTATTGCTAAAGC+TGG | 0.461797 | 4.4:-19366670 | MS.gene35150:CDS |
| GTAATATCACCTCGTCGGTC+AGG | 0.470980 | 4.4:+19366034 | None:intergenic |
| ATCACCTCGTCGGTCAGGTC+AGG | 0.472355 | 4.4:+19366039 | None:intergenic |
| AGCTATTGTTGGGATATATA+AGG | 0.475943 | 4.4:-19367548 | MS.gene35150:CDS |
| CACTCATAGGTTCTCTCGTA+AGG | 0.476726 | 4.4:-19367939 | MS.gene35150:intron |
| CCGCAGCATACGCTGAGCTC+AGG | 0.478922 | 4.4:-19365799 | MS.gene35150:CDS |
| TGTAGCTATACACGAAGTTA+TGG | 0.479537 | 4.4:-19366701 | MS.gene35150:CDS |
| GCAGGTGAGGCGGCACATGA+TGG | 0.487147 | 4.4:-19366228 | MS.gene35150:intron |
| ACTTCCGCGACTTAGGAAAC+AGG | 0.488263 | 4.4:-19369410 | MS.gene35150:intron |
| GATCAATATCAGGATCCATT+TGG | 0.488984 | 4.4:+19366381 | None:intergenic |
| GAGAAAGAAGGTTAGAAGCT+GGG | 0.489696 | 4.4:-19366792 | MS.gene35150:CDS |
| TGCTTATCTACCTCCATCAA+TGG | 0.489979 | 4.4:+19366313 | None:intergenic |
| AAGAATGGAACTCATTTGAG+AGG | 0.490629 | 4.4:-19367188 | MS.gene35150:CDS |
| CCCTTAGCCATATCAACTAC+TGG | 0.490846 | 4.4:-19366951 | MS.gene35150:CDS |
| GCGTATGCATCGATTTCGTT+CGG | 0.491063 | 4.4:-19366336 | MS.gene35150:CDS |
| GGAGAAAGAAGGTTAGAAGC+TGG | 0.494652 | 4.4:-19366793 | MS.gene35150:CDS |
| TGGATGAGCGTGAAGAAGAG+AGG | 0.506377 | 4.4:-19364968 | MS.gene35150:CDS |
| TAGAGGATGTTATCAATAGA+GGG | 0.506627 | 4.4:-19364373 | MS.gene35150:CDS |
| ATCCAAAGTATTTGAAGGAA+GGG | 0.508850 | 4.4:-19369235 | MS.gene35150:CDS |
| TACTGGTCGGGGTTCTTCTG+GGG | 0.512239 | 4.4:-19366934 | MS.gene35150:CDS |
| ACCAGTAGTTGATATGGCTA+AGG | 0.512348 | 4.4:+19366950 | None:intergenic |
| CCCAGCTTTAGCAATAGTTA+CGG | 0.512480 | 4.4:+19366669 | None:intergenic |
| TTCCTAAGTCGCGGAAGTTG+TGG | 0.513194 | 4.4:+19369415 | None:intergenic |
| CAATAGGTATTTGATCCAAA+CGG | 0.513204 | 4.4:+19364402 | None:intergenic |
| TAGTGACATTAATATGATGA+TGG | 0.514077 | 4.4:-19367030 | MS.gene35150:CDS |
| GATGTTATCAATAGAGGGGC+AGG | 0.514272 | 4.4:-19364368 | MS.gene35150:CDS |
| AAAAGCAAAGGCAGTGTGAA+TGG | 0.514455 | 4.4:-19367514 | MS.gene35150:CDS |
| AGGTTCTATGGTTTGTGTCG+AGG | 0.516449 | 4.4:-19369135 | MS.gene35150:CDS |
| AGCTGATGGAATAGTGCATA+TGG | 0.519463 | 4.4:-19363987 | MS.gene35150:CDS |
| GATCCAAAGTATTTGAAGGA+AGG | 0.524402 | 4.4:-19369236 | MS.gene35150:CDS |
| CTGTTGGTCTCACTCCTGAA+AGG | 0.524781 | 4.4:-19364572 | MS.gene35150:intron |
| GTGGAGAAGAACCTAAAGAA+TGG | 0.527656 | 4.4:-19367203 | MS.gene35150:CDS |
| TACATCTGCAGAGCTGTAAG+TGG | 0.528161 | 4.4:+19364343 | None:intergenic |
| GTTCATTTCTGCCCCACCAC+CGG | 0.530449 | 4.4:-19367898 | MS.gene35150:CDS |
| GTAACTCGGCGAGAAACAAA+AGG | 0.531202 | 4.4:+19369185 | None:intergenic |
| GCGATCGTGTAGCTATTGTT+GGG | 0.531638 | 4.4:-19367558 | MS.gene35150:CDS |
| TCACTTGCACCTTCTATACA+TGG | 0.532357 | 4.4:-19367272 | MS.gene35150:CDS |
| GATCTTGTGATTACCCTTGT+GGG | 0.532708 | 4.4:+19367808 | None:intergenic |
| GTATTTGCACATTCCATACT+CGG | 0.534916 | 4.4:+19367696 | None:intergenic |
| TCATCAAACCTTGTCCATGC+AGG | 0.536771 | 4.4:-19367668 | MS.gene35150:CDS |
| AGTTGAGACTTGGCAACAGA+TGG | 0.538574 | 4.4:+19366999 | None:intergenic |
| TAGTGATCCAAAGTATTTGA+AGG | 0.539186 | 4.4:-19369240 | MS.gene35150:CDS |
| TTTATTGATGCTTGGTGGAG+TGG | 0.540439 | 4.4:-19367222 | MS.gene35150:CDS |
| GTCGCGGAAGTTGTGGAGAT+CGG | 0.540703 | 4.4:+19369422 | None:intergenic |
| TGCAAGATATGGAAGAGAAG+AGG | 0.544193 | 4.4:-19366202 | MS.gene35150:CDS |
| TGCTCTCAAGAGTTGAGACT+TGG | 0.546404 | 4.4:+19366989 | None:intergenic |
| GGATGAGCGTGAAGAAGAGA+GGG | 0.547538 | 4.4:-19364967 | MS.gene35150:CDS |
| AAATATAACAGAATGCTACA+TGG | 0.553194 | 4.4:-19366150 | MS.gene35150:CDS |
| CAGGTGAGGCGGCACATGAT+GGG | 0.554148 | 4.4:-19366227 | MS.gene35150:CDS |
| GCGGTTACCGAAGTTGTTCG+TGG | 0.554563 | 4.4:-19369263 | MS.gene35150:CDS |
| ACAATAGCTACACGATCGCC+AGG | 0.554581 | 4.4:+19367562 | None:intergenic |
| AGGAACTTCCTGCATGGACA+AGG | 0.555183 | 4.4:+19367660 | None:intergenic |
| AGAGGGAAAGGGAACTGGAG+AGG | 0.555234 | 4.4:-19364950 | MS.gene35150:CDS |
| AGAAAGAAGGTTAGAAGCTG+GGG | 0.555415 | 4.4:-19366791 | MS.gene35150:CDS |
| CAAATTGAAGTTGAGCAGAA+AGG | 0.555939 | 4.4:-19365601 | MS.gene35150:intron |
| AACAGCAGGTTGGGCTTCTG+AGG | 0.561016 | 4.4:+19364590 | None:intergenic |
| AATAGATTAATGATAGCTGA+TGG | 0.561185 | 4.4:-19364001 | MS.gene35150:CDS |
| TGTTTATTGCAGGATGAAAG+TGG | 0.562229 | 4.4:-19367733 | MS.gene35150:intron |
| GAAGATCCCTCGGCGTAACT+CGG | 0.562743 | 4.4:+19369171 | None:intergenic |
| GAAGGGGAACAAGTTCTCGT+TGG | 0.563161 | 4.4:-19369218 | MS.gene35150:CDS |
| CAGGATCTGTTTATCCCACA+AGG | 0.565225 | 4.4:-19367822 | MS.gene35150:CDS |
| AATACCTATTGCAGACATAG+AGG | 0.567260 | 4.4:-19364390 | MS.gene35150:CDS |
| GCTGGCTTTGTGCAGACTGG+AGG | 0.568451 | 4.4:-19365684 | MS.gene35150:intron |
| AATGATTGCATATACTCACT+TGG | 0.571052 | 4.4:+19369293 | None:intergenic |
| TAGCTCAACATCAGATGCCA+TGG | 0.571126 | 4.4:-19364625 | MS.gene35150:CDS |
| TGAGGTATCGTCTACTTCCA+TGG | 0.571458 | 4.4:+19364608 | None:intergenic |
| GTTCCTGAAAATTCTGCACC+TGG | 0.572249 | 4.4:-19367643 | MS.gene35150:CDS |
| AATCGAGAAAGCAAAGAGTC+CGG | 0.573316 | 4.4:+19366428 | None:intergenic |
| TTTCGTTCGGCCATTGATGG+AGG | 0.573515 | 4.4:-19366323 | MS.gene35150:intron |
| GTATGGAATGTGCAAATACA+AGG | 0.573655 | 4.4:-19367692 | MS.gene35150:CDS |
| AGGGCTGACGGTGAAAATGA+TGG | 0.574482 | 4.4:-19364921 | MS.gene35150:CDS |
| GCGTGAAGAAGAGAGGGAAA+GGG | 0.575235 | 4.4:-19364961 | MS.gene35150:CDS |
| GCCATATCAACTACTGGTCG+GGG | 0.576917 | 4.4:-19366945 | MS.gene35150:CDS |
| TCCAAAGTATTTGAAGGAAG+GGG | 0.578778 | 4.4:-19369234 | MS.gene35150:CDS |
| AAGGTTAGAAGCTGGGGCAA+TGG | 0.578812 | 4.4:-19366785 | MS.gene35150:CDS |
| GACATTAATATGATGATGGT+TGG | 0.581184 | 4.4:-19367026 | MS.gene35150:CDS |
| ATCACTACCACGAACAACTT+CGG | 0.581462 | 4.4:+19369256 | None:intergenic |
| GGGAACTGGAGAGGAAGCGT+AGG | 0.584238 | 4.4:-19364941 | MS.gene35150:CDS |
| GAGAGGAAGCGTAGGGCTGA+CGG | 0.585761 | 4.4:-19364933 | MS.gene35150:CDS |
| AGGTATTTGATCCAAACGGT+TGG | 0.589006 | 4.4:+19364406 | None:intergenic |
| TCAGAAGCCCAACCTGCTGT+TGG | 0.593759 | 4.4:-19364588 | MS.gene35150:CDS |
| TAGCCATATCAACTACTGGT+CGG | 0.594899 | 4.4:-19366947 | MS.gene35150:CDS |
| CCGTAACTATTGCTAAAGCT+GGG | 0.595027 | 4.4:-19366669 | MS.gene35150:CDS |
| AATTCAGAAAGAAGATCCCT+CGG | 0.598017 | 4.4:+19369161 | None:intergenic |
| CCAGTAGTTGATATGGCTAA+GGG | 0.599324 | 4.4:+19366951 | None:intergenic |
| TTGTGAAGCTTCCGGTGGTG+GGG | 0.601653 | 4.4:+19367887 | None:intergenic |
| GGATCTTGTGATTACCCTTG+TGG | 0.602488 | 4.4:+19367807 | None:intergenic |
| AGAATGGAACTCATTTGAGA+GGG | 0.605684 | 4.4:-19367187 | MS.gene35150:intron |
| TGTATCTCTTCTCAACAAAG+AGG | 0.611474 | 4.4:-19367381 | MS.gene35150:CDS |
| ATATCCATTATGCTAAGCAT+AGG | 0.611548 | 4.4:-19366068 | MS.gene35150:CDS |
| AGGTTCTCTCGTAAGGCCAA+AGG | 0.615602 | 4.4:-19367932 | MS.gene35150:CDS |
| GAGTGAGACCAACAGCAGGT+TGG | 0.616359 | 4.4:+19364580 | None:intergenic |
| TTCTCGCCGAGTTACGCCGA+GGG | 0.617425 | 4.4:-19369177 | MS.gene35150:CDS |
| TCAGGAGTGAGACCAACAGC+AGG | 0.620390 | 4.4:+19364576 | None:intergenic |
| AACAGTGGATATCATAGCAG+AGG | 0.624532 | 4.4:-19367608 | MS.gene35150:CDS |
| GATGAGACATTTGATCTGCT+CGG | 0.628002 | 4.4:-19367299 | MS.gene35150:CDS |
| GAATGCAAAGTCAAATGCGA+AGG | 0.628643 | 4.4:-19365777 | MS.gene35150:intron |
| AACGAAATCGATGCATACGC+AGG | 0.631812 | 4.4:+19366339 | None:intergenic |
| GGAACTGGAGAGGAAGCGTA+GGG | 0.634871 | 4.4:-19364940 | MS.gene35150:CDS |
| TGTGGGATAAACAGATCCTG+TGG | 0.635018 | 4.4:+19367825 | None:intergenic |
| TAATGCTCGTTGCAGTGTGG+TGG | 0.636953 | 4.4:-19366632 | MS.gene35150:CDS |
| CGAACCTGTTTCCTAAGTCG+CGG | 0.638069 | 4.4:+19369406 | None:intergenic |
| AACGAGCATTAAGTGAGGCA+TGG | 0.639848 | 4.4:+19366644 | None:intergenic |
| TATTAGTAATATCACCTCGT+CGG | 0.642234 | 4.4:+19366029 | None:intergenic |
| CGGAGATGTTGACGATTAAG+CGG | 0.642528 | 4.4:+19369442 | None:intergenic |
| ACTTATCAATGCAGGTGAGG+CGG | 0.643335 | 4.4:-19366238 | MS.gene35150:intron |
| ATGTAATGTCGCGATAATCG+CGG | 0.653688 | 4.4:+19367863 | None:intergenic |
| GCAATGGTTCTTGCTGACAG+AGG | 0.666936 | 4.4:-19366769 | MS.gene35150:CDS |
| GTGGGATAAACAGATCCTGT+GGG | 0.670399 | 4.4:+19367826 | None:intergenic |
| GCGGCTTGTGAAGCTTCCGG+TGG | 0.672913 | 4.4:+19367882 | None:intergenic |
| TGGTCAGCTCCCAAGAACAG+TGG | 0.674225 | 4.4:-19367623 | MS.gene35150:CDS |
| TTTCTCGCCGAGTTACGCCG+AGG | 0.678265 | 4.4:-19369178 | MS.gene35150:CDS |
| AGAGGATGTTATCAATAGAG+GGG | 0.680220 | 4.4:-19364372 | MS.gene35150:CDS |
| CCTGAGCTCAGCGTATGCTG+CGG | 0.682238 | 4.4:+19365799 | None:intergenic |
| AGATGTTGACGATTAAGCGG+CGG | 0.690438 | 4.4:+19369445 | None:intergenic |
| GAAAATGATGGTCCTGACCG+TGG | 0.700214 | 4.4:-19364909 | MS.gene35150:CDS |
| ACTTAATGCTCGTTGCAGTG+TGG | 0.710896 | 4.4:-19366635 | MS.gene35150:CDS |
| AGGATCTGTTTATCCCACAA+GGG | 0.714764 | 4.4:-19367821 | MS.gene35150:intron |
| TCAACCTGACCTGACCGACG+AGG | 0.718365 | 4.4:-19366043 | MS.gene35150:intron |
| CATGGAAAGAAAACTGACAG+AGG | 0.723703 | 4.4:-19366132 | MS.gene35150:CDS |
| ACTGCAACGAGCATTAAGTG+AGG | 0.755012 | 4.4:+19366639 | None:intergenic |
| CAGGCTTGCAAGAATCAACG+AGG | 0.764400 | 4.4:+19367581 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTGTAATATATAAGA+GGG | + | chr4.4:19367659-19367678 | None:intergenic | 10.0% |
| !! | ATCAAAAATCAATTATTATA+AGG | + | chr4.4:19364592-19364611 | None:intergenic | 10.0% |
| !! | GAAAAATTTAATTGATATAA+GGG | + | chr4.4:19367788-19367807 | None:intergenic | 10.0% |
| !! | TCAAAAATCAATTATTATAA+GGG | + | chr4.4:19364591-19364610 | None:intergenic | 10.0% |
| !! | GATAAATTGTAATATATAAG+AGG | + | chr4.4:19367660-19367679 | None:intergenic | 15.0% |
| !! | GGAAAAATTTAATTGATATA+AGG | + | chr4.4:19367789-19367808 | None:intergenic | 15.0% |
| !!! | AATTATAATTTCTTTTTGTC+AGG | - | chr4.4:19366814-19366833 | MS.gene35150:intron | 15.0% |
| !!! | ACTGAAAAATTAATTTGAAA+TGG | + | chr4.4:19368154-19368173 | None:intergenic | 15.0% |
| !!! | ATTATATCACTCAATTTTTT+TGG | - | chr4.4:19366485-19366504 | MS.gene35150:intron | 15.0% |
| !!! | CTATCTTTTTTATGTTTTTA+AGG | + | chr4.4:19366301-19366320 | None:intergenic | 15.0% |
| !!! | TATATCTTAATTTTTACCAT+AGG | - | chr4.4:19368822-19368841 | MS.gene35150:intron | 15.0% |
| !! | AAAAATAATGCTAGAAATGA+AGG | + | chr4.4:19365845-19365864 | None:intergenic | 20.0% |
| !! | ATTACAATTTATCTGTTGTA+AGG | - | chr4.4:19367667-19367686 | MS.gene35150:CDS | 20.0% |
| !! | ATTTAATTGATATAAGGGAT+TGG | + | chr4.4:19367783-19367802 | None:intergenic | 20.0% |
| !! | CACATTTATAATTACAAAGA+CGG | + | chr4.4:19369534-19369553 | None:intergenic | 20.0% |
| !! | CTAAATAAGTTTAAGAAATC+AGG | + | chr4.4:19368950-19368969 | None:intergenic | 20.0% |
| !! | TAAGAAAACAAAGTTATAAG+AGG | + | chr4.4:19369104-19369123 | None:intergenic | 20.0% |
| !! | TATAACACAAGATAAGATAA+AGG | - | chr4.4:19364752-19364771 | MS.gene35150:intron | 20.0% |
| !! | TTGAGTGATATAATGATATA+TGG | + | chr4.4:19366479-19366498 | None:intergenic | 20.0% |
| !!! | AAATATTTTAATGTGTCCTT+GGG | - | chr4.4:19365481-19365500 | MS.gene35150:intron | 20.0% |
| !!! | AAATCAATAGTTCTACATAT+CGG | - | chr4.4:19367904-19367923 | MS.gene35150:CDS | 20.0% |
| !!! | AAATTAGTTTATGCTATCTT+TGG | - | chr4.4:19368768-19368787 | MS.gene35150:intron | 20.0% |
| !!! | AATTAGTTTATGCTATCTTT+GGG | - | chr4.4:19368769-19368788 | MS.gene35150:intron | 20.0% |
| !!! | AGCATTATTTTTATTACGAA+AGG | - | chr4.4:19365853-19365872 | MS.gene35150:intron | 20.0% |
| !!! | ATAATTGATTTTTGATTCCT+AGG | - | chr4.4:19364596-19364615 | MS.gene35150:CDS | 20.0% |
| !!! | ATTTTTATTATAAGCTCTCT+AGG | + | chr4.4:19364820-19364839 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGTTGAATCAGAT+CGG | - | chr4.4:19364112-19364131 | MS.gene35150:intron | 20.0% |
| !!! | TAAATATTTTAATGTGTCCT+TGG | - | chr4.4:19365480-19365499 | MS.gene35150:intron | 20.0% |
| !!! | TAATTGATTTTTGATTCCTA+GGG | - | chr4.4:19364597-19364616 | MS.gene35150:CDS | 20.0% |
| !!! | TATCAATTAAATTTTTCCAC+AGG | - | chr4.4:19367791-19367810 | MS.gene35150:intron | 20.0% |
| !!! | TATTATAGTTTCTAAAGTTC+TGG | + | chr4.4:19367987-19368006 | None:intergenic | 20.0% |
| !!! | TTATACTTTACCTTTTGTTT+TGG | - | chr4.4:19365022-19365041 | MS.gene35150:CDS | 20.0% |
| ! | AAAAGACAAGACAATGTAAT+TGG | + | chr4.4:19369580-19369599 | None:intergenic | 25.0% |
| ! | AAACAGGTAAATATTCTTCA+AGG | - | chr4.4:19366750-19366769 | MS.gene35150:CDS | 25.0% |
| ! | AAATATAACAGAATGCTACA+TGG | - | chr4.4:19367478-19367497 | MS.gene35150:intron | 25.0% |
| ! | AACTAAAAATATTGGACTAC+CGG | - | chr4.4:19367181-19367200 | MS.gene35150:intron | 25.0% |
| ! | AAGATTAGATGCTTTATAAC+CGG | + | chr4.4:19365556-19365575 | None:intergenic | 25.0% |
| ! | AATAGATTAATGATAGCTGA+TGG | - | chr4.4:19369627-19369646 | MS.gene35150:CDS | 25.0% |
| ! | AATGTTCTGTAATTAGGATT+TGG | + | chr4.4:19365170-19365189 | None:intergenic | 25.0% |
| ! | ACATAAAAAAGATAGCTGAA+AGG | - | chr4.4:19366306-19366325 | MS.gene35150:intron | 25.0% |
| ! | ACCCAAAAGAATCAAATAAA+CGG | + | chr4.4:19365437-19365456 | None:intergenic | 25.0% |
| ! | ATACATTGATACCATGTTAA+TGG | - | chr4.4:19368909-19368928 | MS.gene35150:intron | 25.0% |
| ! | ATTAACATACTTATCAATGC+AGG | - | chr4.4:19367382-19367401 | MS.gene35150:CDS | 25.0% |
| ! | CATAAAAAAGATAGCTGAAA+GGG | - | chr4.4:19366307-19366326 | MS.gene35150:intron | 25.0% |
| ! | GATCTTCTTTCTGAATTTAT+AGG | - | chr4.4:19364473-19364492 | MS.gene35150:intron | 25.0% |
| ! | GTATGTTACGAATATCTAAA+AGG | + | chr4.4:19368071-19368090 | None:intergenic | 25.0% |
| ! | TAGTATGATTCATGAGAAAA+CGG | - | chr4.4:19364558-19364577 | MS.gene35150:intron | 25.0% |
| ! | TAGTGACATTAATATGATGA+TGG | - | chr4.4:19366598-19366617 | MS.gene35150:intron | 25.0% |
| ! | TATATGATTACTCCTTGATT+AGG | - | chr4.4:19364664-19364683 | MS.gene35150:intron | 25.0% |
| ! | TATCATTTCCTAAAACTCAA+TGG | + | chr4.4:19365462-19365481 | None:intergenic | 25.0% |
| ! | TTAAAGAGAAGTGAAGAATT+AGG | + | chr4.4:19364052-19364071 | None:intergenic | 25.0% |
| ! | TTAATGTCACTAAAAGAAGA+AGG | + | chr4.4:19366590-19366609 | None:intergenic | 25.0% |
| ! | TTCTGAATTTATAGGTTCTA+TGG | - | chr4.4:19364481-19364500 | MS.gene35150:intron | 25.0% |
| ! | TTCTGTTTCATACAGATTAT+GGG | - | chr4.4:19365634-19365653 | MS.gene35150:CDS | 25.0% |
| ! | TTTCTGTTTCATACAGATTA+TGG | - | chr4.4:19365633-19365652 | MS.gene35150:CDS | 25.0% |
| !! | AACAAGAGCATAAAAATCAT+CGG | + | chr4.4:19367760-19367779 | None:intergenic | 25.0% |
| !! | AACAGATTTTTACGTTTTTC+AGG | - | chr4.4:19364300-19364319 | MS.gene35150:intron | 25.0% |
| !! | AACGATGTTAATTTAGTTTC+TGG | + | chr4.4:19368866-19368885 | None:intergenic | 25.0% |
| !! | ATTAGTTTATGCTATCTTTG+GGG | - | chr4.4:19368770-19368789 | MS.gene35150:intron | 25.0% |
| !! | GGTAATACAACTATTCATTT+TGG | + | chr4.4:19368336-19368355 | None:intergenic | 25.0% |
| !! | GTTAATTTAGTTTCTGGAAA+CGG | + | chr4.4:19368860-19368879 | None:intergenic | 25.0% |
| !! | TTAATTTAGTTTCTGGAAAC+GGG | + | chr4.4:19368859-19368878 | None:intergenic | 25.0% |
| !! | TTGTATTTTCAAACGTTTTC+TGG | + | chr4.4:19368367-19368386 | None:intergenic | 25.0% |
| !!! | AAAGTGATAAAACCACTTTT+GGG | + | chr4.4:19368246-19368265 | None:intergenic | 25.0% |
| !!! | AACTTGTTAATTTCACTCAT+AGG | - | chr4.4:19365676-19365695 | MS.gene35150:intron | 25.0% |
| !!! | CATAATGGATATACTTTTTC+AGG | + | chr4.4:19367552-19367571 | None:intergenic | 25.0% |
| !!! | GTAGAACTATTGATTTGTTT+CGG | + | chr4.4:19367900-19367919 | None:intergenic | 25.0% |
| !!! | TAGAACTATTGATTTGTTTC+GGG | + | chr4.4:19367899-19367918 | None:intergenic | 25.0% |
| !!! | TTATGTTTTTAAGGTCTTCA+GGG | + | chr4.4:19366292-19366311 | None:intergenic | 25.0% |
| !!! | TTCTTTTACTTTTAGAACCA+CGG | + | chr4.4:19368739-19368758 | None:intergenic | 25.0% |
| !!! | TTTATGTTTTTAAGGTCTTC+AGG | + | chr4.4:19366293-19366312 | None:intergenic | 25.0% |
| AAACAGTTTACATACGAAAC+AGG | + | chr4.4:19369146-19369165 | None:intergenic | 30.0% | |
| AAAGAGAGAAACTGAAAGAA+AGG | + | chr4.4:19369507-19369526 | None:intergenic | 30.0% | |
| AACAAAATCGAATTCTACAG+TGG | + | chr4.4:19364272-19364291 | None:intergenic | 30.0% | |
| AAGAAAAATTGTAGCCAATG+AGG | + | chr4.4:19368466-19368485 | None:intergenic | 30.0% | |
| AAGAGAGAAACTGAAAGAAA+GGG | + | chr4.4:19369506-19369525 | None:intergenic | 30.0% | |
| AATGATTGCATATACTCACT+TGG | + | chr4.4:19364338-19364357 | None:intergenic | 30.0% | |
| ACTGACTAAATGTTTATTGC+AGG | - | chr4.4:19365885-19365904 | MS.gene35150:intron | 30.0% | |
| AGAAAAATTGTAGCCAATGA+GGG | + | chr4.4:19368465-19368484 | None:intergenic | 30.0% | |
| AGCTATTGTTGGGATATATA+AGG | - | chr4.4:19366080-19366099 | MS.gene35150:CDS | 30.0% | |
| AGTCTTTCTTTAGTTACACT+TGG | - | chr4.4:19368171-19368190 | MS.gene35150:intron | 30.0% | |
| AGTTATAAGAGGCTAAAGAT+TGG | + | chr4.4:19369093-19369112 | None:intergenic | 30.0% | |
| AGTTTCTGTTCAATAAAGCA+AGG | + | chr4.4:19366184-19366203 | None:intergenic | 30.0% | |
| ATAGAGGATGTTATCAATAG+AGG | - | chr4.4:19369254-19369273 | MS.gene35150:CDS | 30.0% | |
| ATATCCATTATGCTAAGCAT+AGG | - | chr4.4:19367560-19367579 | MS.gene35150:CDS | 30.0% | |
| ATTACTCCTTGATTAGGATT+AGG | - | chr4.4:19364670-19364689 | MS.gene35150:intron | 30.0% | |
| CAAAAATGTCACCATTAACA+TGG | + | chr4.4:19368923-19368942 | None:intergenic | 30.0% | |
| CAATAATTACCGACCAAATT+TGG | + | chr4.4:19365374-19365393 | None:intergenic | 30.0% | |
| CAATAGGTATTTGATCCAAA+CGG | + | chr4.4:19369229-19369248 | None:intergenic | 30.0% | |
| CAATTGCTCAAATATGCATT+TGG | - | chr4.4:19368437-19368456 | MS.gene35150:intron | 30.0% | |
| CATTGAGTTATCATAATGTC+TGG | - | chr4.4:19369468-19369487 | MS.gene35150:CDS | 30.0% | |
| CCCAAAAGAATCAAATAAAC+GGG | + | chr4.4:19365436-19365455 | None:intergenic | 30.0% | |
| CTGACTCCAACTAAAAATAT+TGG | - | chr4.4:19367173-19367192 | MS.gene35150:intron | 30.0% | |
| GAGCTAGTAAAAAGAAAAAC+AGG | + | chr4.4:19368989-19369008 | None:intergenic | 30.0% | |
| GATAAATGTCAAGAATGTGT+TGG | + | chr4.4:19366530-19366549 | None:intergenic | 30.0% | |
| GTAATCATTTCCACCAAATT+TGG | - | chr4.4:19365358-19365377 | MS.gene35150:intron | 30.0% | |
| GTCTGTAATGTTCTGTAATT+AGG | + | chr4.4:19365176-19365195 | None:intergenic | 30.0% | |
| GTGGAAATGATTACGATTAT+AGG | + | chr4.4:19365352-19365371 | None:intergenic | 30.0% | |
| GTTTCTGTTCAATAAAGCAA+GGG | + | chr4.4:19366183-19366202 | None:intergenic | 30.0% | |
| GTTTGCAAAAGTTGTAATAC+TGG | - | chr4.4:19366560-19366579 | MS.gene35150:intron | 30.0% | |
| TAGAGGATGTTATCAATAGA+GGG | - | chr4.4:19369255-19369274 | MS.gene35150:CDS | 30.0% | |
| TATTAGTAATATCACCTCGT+CGG | + | chr4.4:19367602-19367621 | None:intergenic | 30.0% | |
| TCAAATGAGTTCCATTCTTT+AGG | + | chr4.4:19366439-19366458 | None:intergenic | 30.0% | |
| TCATAAAGAACTGACAGAAA+TGG | - | chr4.4:19368640-19368659 | MS.gene35150:intron | 30.0% | |
| TGTTACGAATATCTAAAAGG+TGG | + | chr4.4:19368068-19368087 | None:intergenic | 30.0% | |
| TTTAGTTACACTTGGACATT+TGG | - | chr4.4:19368179-19368198 | MS.gene35150:intron | 30.0% | |
| ! | AATTAATTTGAAATGGCCTC+TGG | + | chr4.4:19368147-19368166 | None:intergenic | 30.0% |
| ! | ACCCGTTTATTTGATTCTTT+TGG | - | chr4.4:19365432-19365451 | MS.gene35150:intron | 30.0% |
| ! | ATCCAAAGTATTTGAAGGAA+GGG | - | chr4.4:19364393-19364412 | MS.gene35150:CDS | 30.0% |
| ! | ATCTGTTGTAAGGAACTTTT+GGG | - | chr4.4:19367677-19367696 | MS.gene35150:CDS | 30.0% |
| ! | CAAGTTGTAAAAGTACAACA+AGG | + | chr4.4:19368518-19368537 | None:intergenic | 30.0% |
| ! | CCCGTTTATTTGATTCTTTT+GGG | - | chr4.4:19365433-19365452 | MS.gene35150:intron | 30.0% |
| ! | GAAAGTGATAAAACCACTTT+TGG | + | chr4.4:19368247-19368266 | None:intergenic | 30.0% |
| ! | TAGTGATCCAAAGTATTTGA+AGG | - | chr4.4:19364388-19364407 | MS.gene35150:CDS | 30.0% |
| ! | TATCTGTTGTAAGGAACTTT+TGG | - | chr4.4:19367676-19367695 | MS.gene35150:CDS | 30.0% |
| ! | TATGCAATCATTTTGTGATG+CGG | - | chr4.4:19364346-19364365 | MS.gene35150:CDS | 30.0% |
| ! | TGAACACTTTTAACAACCTT+TGG | + | chr4.4:19365715-19365734 | None:intergenic | 30.0% |
| ! | TGATCTGTTGTTTATTGTGT+TGG | - | chr4.4:19367223-19367242 | MS.gene35150:CDS | 30.0% |
| !! | GACATTAATATGATGATGGT+TGG | - | chr4.4:19366602-19366621 | MS.gene35150:intron | 30.0% |
| !! | TGGTAATAAGAGTCATTTTC+CGG | - | chr4.4:19365534-19365553 | MS.gene35150:intron | 30.0% |
| !!! | CACTCAATTTTTTTGGAAGA+TGG | - | chr4.4:19366492-19366511 | MS.gene35150:intron | 30.0% |
| !!! | GGTAGTCCAATATTTTTAGT+TGG | + | chr4.4:19367182-19367201 | None:intergenic | 30.0% |
| !!! | TTACCTTTTGTTTTGGTCAA+TGG | - | chr4.4:19365029-19365048 | MS.gene35150:CDS | 30.0% |
| AAAAGCCACAAAGTCAAGTT+TGG | + | chr4.4:19367124-19367143 | None:intergenic | 35.0% | |
| AAACAGGCAGAGTTCAATAA+TGG | + | chr4.4:19368973-19368992 | None:intergenic | 35.0% | |
| AAGAATGGAACTCATTTGAG+AGG | - | chr4.4:19366440-19366459 | MS.gene35150:CDS | 35.0% | |
| AATACCTATTGCAGACATAG+AGG | - | chr4.4:19369238-19369257 | MS.gene35150:CDS | 35.0% | |
| AATTCAGAAAGAAGATCCCT+CGG | + | chr4.4:19364470-19364489 | None:intergenic | 35.0% | |
| ACGGGAAATAAATGAACCTA+TGG | + | chr4.4:19368841-19368860 | None:intergenic | 35.0% | |
| ACGTAATAGACATGTTATGC+AGG | - | chr4.4:19365300-19365319 | MS.gene35150:intron | 35.0% | |
| AGAAACTTGATTGATTGCTG+TGG | - | chr4.4:19366197-19366216 | MS.gene35150:CDS | 35.0% | |
| AGAATGGAACTCATTTGAGA+GGG | - | chr4.4:19366441-19366460 | MS.gene35150:CDS | 35.0% | |
| AGACTTCACAATAGACATTC+AGG | + | chr4.4:19367729-19367748 | None:intergenic | 35.0% | |
| AGAGAGAAACTGAAAGAAAG+GGG | + | chr4.4:19369505-19369524 | None:intergenic | 35.0% | |
| AGAGGATGTTATCAATAGAG+GGG | - | chr4.4:19369256-19369275 | MS.gene35150:CDS | 35.0% | |
| CAAATTGAAGTTGAGCAGAA+AGG | - | chr4.4:19368027-19368046 | MS.gene35150:intron | 35.0% | |
| CATGTTATGCATTATGCTAG+AGG | - | chr4.4:19365507-19365526 | MS.gene35150:intron | 35.0% | |
| CCAAAAGATAACACCAATTG+CGG | + | chr4.4:19365588-19365607 | None:intergenic | 35.0% | |
| CCACTTACAGTTCCATATAT+GGG | + | chr4.4:19367033-19367052 | None:intergenic | 35.0% | |
| CGCGACATTACATCTAATTT+GGG | - | chr4.4:19365775-19365794 | MS.gene35150:intron | 35.0% | |
| CTATGATATCCACTGTTCTT+GGG | + | chr4.4:19366017-19366036 | None:intergenic | 35.0% | |
| CTGCTTTCTTTATCCAAGAA+TGG | + | chr4.4:19366382-19366401 | None:intergenic | 35.0% | |
| CTGTTTATTGTGAAGTTGCT+GGG | - | chr4.4:19364973-19364992 | MS.gene35150:CDS | 35.0% | |
| CTTTCTGCTCAACTTCAATT+TGG | + | chr4.4:19368029-19368048 | None:intergenic | 35.0% | |
| GAATCCTATGCTTAGCATAA+TGG | + | chr4.4:19367567-19367586 | None:intergenic | 35.0% | |
| GACAATGTAATTGGAGTTTG+TGG | + | chr4.4:19369571-19369590 | None:intergenic | 35.0% | |
| GATATTTGGCGATCAATATC+AGG | + | chr4.4:19367260-19367279 | None:intergenic | 35.0% | |
| GATCAATATCAGGATCCATT+TGG | + | chr4.4:19367250-19367269 | None:intergenic | 35.0% | |
| GGAAAGAGTAAAGGTAAAAG+CGG | + | chr4.4:19364251-19364270 | None:intergenic | 35.0% | |
| GGATACTAGTGTAGCTAATA+CGG | + | chr4.4:19369361-19369380 | None:intergenic | 35.0% | |
| GTATGGAATGTGCAAATACA+AGG | - | chr4.4:19365936-19365955 | MS.gene35150:intron | 35.0% | |
| GTATTTGCACATTCCATACT+CGG | + | chr4.4:19365935-19365954 | None:intergenic | 35.0% | |
| GTCAAGTTTGGAAGAGTTAA+AGG | + | chr4.4:19367112-19367131 | None:intergenic | 35.0% | |
| GTTACTTCAGATCAAGAAAC+AGG | - | chr4.4:19366734-19366753 | MS.gene35150:CDS | 35.0% | |
| GTTGAGAAGAGATACATTGT+TGG | + | chr4.4:19366243-19366262 | None:intergenic | 35.0% | |
| GTTTATTGTGTTGGACCAAA+TGG | - | chr4.4:19367232-19367251 | MS.gene35150:CDS | 35.0% | |
| TAATTACCGACCAAATTTGG+TGG | + | chr4.4:19365371-19365390 | None:intergenic | 35.0% | |
| TATTAGCTACACTAGTATCC+AGG | - | chr4.4:19369361-19369380 | MS.gene35150:intron | 35.0% | |
| TCAAAAGATGTACCTCTAAC+AGG | + | chr4.4:19369316-19369335 | None:intergenic | 35.0% | |
| TCATTTCCACCAAATTTGGT+CGG | - | chr4.4:19365362-19365381 | MS.gene35150:intron | 35.0% | |
| TCGCGACATTACATCTAATT+TGG | - | chr4.4:19365774-19365793 | MS.gene35150:intron | 35.0% | |
| TCTGTTTATTGTGAAGTTGC+TGG | - | chr4.4:19364972-19364991 | MS.gene35150:CDS | 35.0% | |
| TGACCATTGACCAAAACAAA+AGG | + | chr4.4:19365035-19365054 | None:intergenic | 35.0% | |
| TGAGAATGTGATACTATTCC+TGG | + | chr4.4:19369382-19369401 | None:intergenic | 35.0% | |
| TGTAGCTATACACGAAGTTA+TGG | - | chr4.4:19366927-19366946 | MS.gene35150:CDS | 35.0% | |
| TGTATCTCTTCTCAACAAAG+AGG | - | chr4.4:19366247-19366266 | MS.gene35150:intron | 35.0% | |
| TGTTTATTGCAGGATGAAAG+TGG | - | chr4.4:19365895-19365914 | MS.gene35150:intron | 35.0% | |
| TTCTACAGTGGAAAGAGTAA+AGG | + | chr4.4:19364260-19364279 | None:intergenic | 35.0% | |
| TTGAATAAGCCAATCCAAAC+AGG | - | chr4.4:19364909-19364928 | MS.gene35150:CDS | 35.0% | |
| TTGAATTCTCTAGTGTATGC+AGG | + | chr4.4:19367362-19367381 | None:intergenic | 35.0% | |
| ! | ACCCTTCCAACTTTTCTTAT+GGG | - | chr4.4:19368204-19368223 | MS.gene35150:intron | 35.0% |
| ! | GAAGCATTCAATTCCCTATT+TGG | - | chr4.4:19369185-19369204 | MS.gene35150:CDS | 35.0% |
| ! | GATCCAAAGTATTTGAAGGA+AGG | - | chr4.4:19364392-19364411 | MS.gene35150:CDS | 35.0% |
| ! | GCAGTGATTTTATTGATGCT+TGG | - | chr4.4:19366398-19366417 | MS.gene35150:CDS | 35.0% |
| ! | GTGATTTTATTGATGCTTGG+TGG | - | chr4.4:19366401-19366420 | MS.gene35150:CDS | 35.0% |
| ! | TACCCTTCCAACTTTTCTTA+TGG | - | chr4.4:19368203-19368222 | MS.gene35150:intron | 35.0% |
| ! | TCCAAAGTATTTGAAGGAAG+GGG | - | chr4.4:19364394-19364413 | MS.gene35150:CDS | 35.0% |
| ! | TCTAAAGTTCTGGCAGTTAT+TGG | + | chr4.4:19367977-19367996 | None:intergenic | 35.0% |
| ! | TCTTTTTGTCAGGAGAAAGA+AGG | - | chr4.4:19366824-19366843 | MS.gene35150:intron | 35.0% |
| ! | TTGGGTATCCATTGAGTTTT+AGG | - | chr4.4:19365451-19365470 | MS.gene35150:intron | 35.0% |
| !! | GATCGGAAAAAGCATTTACA+TGG | - | chr4.4:19364129-19364148 | MS.gene35150:intron | 35.0% |
| !! | GTTTTGTATTGATATCCTGC+TGG | - | chr4.4:19367926-19367945 | MS.gene35150:CDS | 35.0% |
| !! | TGTTAGAGGTACATCTTTTG+AGG | - | chr4.4:19369315-19369334 | MS.gene35150:intron | 35.0% |
| !! | TTCAAACGTTTTCTGGCATT+TGG | + | chr4.4:19368360-19368379 | None:intergenic | 35.0% |
| !!! | TATTTTAATGTGTCCTTGGG+TGG | - | chr4.4:19365484-19365503 | MS.gene35150:intron | 35.0% |
| !!! | TCTTTTTTACAAGCCGCAAT+TGG | - | chr4.4:19365572-19365591 | MS.gene35150:intron | 35.0% |
| AAAAGCAAAGGCAGTGTGAA+TGG | - | chr4.4:19366114-19366133 | MS.gene35150:CDS | 40.0% | |
| AAACAGGCTATCAGTAGCTT+TGG | - | chr4.4:19364925-19364944 | MS.gene35150:CDS | 40.0% | |
| AAAGCTACTGATAGCCTGTT+TGG | + | chr4.4:19364926-19364945 | None:intergenic | 40.0% | |
| AACAAACGTAGTATGTCCAG+AGG | - | chr4.4:19368128-19368147 | MS.gene35150:intron | 40.0% | |
| AACAGGCTATCAGTAGCTTT+GGG | - | chr4.4:19364926-19364945 | MS.gene35150:CDS | 40.0% | |
| AACAGTGGATATCATAGCAG+AGG | - | chr4.4:19366020-19366039 | MS.gene35150:intron | 40.0% | |
| AATCGAGAAAGCAAAGAGTC+CGG | + | chr4.4:19367203-19367222 | None:intergenic | 40.0% | |
| AATGGTCAATGATGTGGAAG+TGG | - | chr4.4:19365047-19365066 | MS.gene35150:intron | 40.0% | |
| ACAAGTTCAAGAGAAACCCT+AGG | + | chr4.4:19364616-19364635 | None:intergenic | 40.0% | |
| ACAGTGCCTAATCCTAATCA+AGG | + | chr4.4:19364679-19364698 | None:intergenic | 40.0% | |
| ACATCCTCTATGTCTGCAAT+AGG | + | chr4.4:19369245-19369264 | None:intergenic | 40.0% | |
| ACCGTAACTATTGCTAAAGC+TGG | - | chr4.4:19366958-19366977 | MS.gene35150:CDS | 40.0% | |
| ACTAGTGTAGCTAATACGGA+TGG | + | chr4.4:19369357-19369376 | None:intergenic | 40.0% | |
| AGAAAGAAGGTTAGAAGCTG+GGG | - | chr4.4:19366837-19366856 | MS.gene35150:intron | 40.0% | |
| AGATGTATTGCTCCTGTTAG+AGG | - | chr4.4:19369301-19369320 | MS.gene35150:CDS | 40.0% | |
| AGCTGATGGAATAGTGCATA+TGG | - | chr4.4:19369641-19369660 | MS.gene35150:CDS | 40.0% | |
| AGGATCTGTTTATCCCACAA+GGG | - | chr4.4:19365807-19365826 | MS.gene35150:CDS | 40.0% | |
| AGGTATTTGATCCAAACGGT+TGG | + | chr4.4:19369225-19369244 | None:intergenic | 40.0% | |
| ATCACTACCACGAACAACTT+CGG | + | chr4.4:19364375-19364394 | None:intergenic | 40.0% | |
| ATGTAATGTCGCGATAATCG+CGG | + | chr4.4:19365768-19365787 | None:intergenic | 40.0% | |
| ATGTAATTGGAGTTTGTGGC+TGG | + | chr4.4:19369567-19369586 | None:intergenic | 40.0% | |
| ATTTACCAACCAAGTGAGTC+TGG | + | chr4.4:19365410-19365429 | None:intergenic | 40.0% | |
| CAAGAATGGCCATGTATAGA+AGG | + | chr4.4:19366368-19366387 | None:intergenic | 40.0% | |
| CAAGTTCTCGTTGGATTTGA+AGG | - | chr4.4:19364419-19364438 | MS.gene35150:CDS | 40.0% | |
| CATACTTATCAATGCAGGTG+AGG | - | chr4.4:19367387-19367406 | MS.gene35150:CDS | 40.0% | |
| CATGGAAAGAAAACTGACAG+AGG | - | chr4.4:19367496-19367515 | MS.gene35150:intron | 40.0% | |
| CCCATATATGGAACTGTAAG+TGG | - | chr4.4:19367030-19367049 | MS.gene35150:CDS | 40.0% | |
| CCCCATAAGAAAAGTTGGAA+GGG | + | chr4.4:19368208-19368227 | None:intergenic | 40.0% | |
| CCGTAACTATTGCTAAAGCT+GGG | - | chr4.4:19366959-19366978 | MS.gene35150:CDS | 40.0% | |
| CTCTTCCAAACTTGACTTTG+TGG | - | chr4.4:19367116-19367135 | MS.gene35150:intron | 40.0% | |
| CTTCTATACATGGCCATTCT+TGG | - | chr4.4:19366366-19366385 | MS.gene35150:CDS | 40.0% | |
| GAATGCAAAGTCAAATGCGA+AGG | - | chr4.4:19367851-19367870 | MS.gene35150:CDS | 40.0% | |
| GAGAAAGAAGGTTAGAAGCT+GGG | - | chr4.4:19366836-19366855 | MS.gene35150:intron | 40.0% | |
| GATCTTGTGATTACCCTTGT+GGG | + | chr4.4:19365823-19365842 | None:intergenic | 40.0% | |
| GATGAGACATTTGATCTGCT+CGG | - | chr4.4:19366329-19366348 | MS.gene35150:CDS | 40.0% | |
| GATTATGGGTTCATTCATGC+TGG | - | chr4.4:19365648-19365667 | MS.gene35150:CDS | 40.0% | |
| GCCACTTACAGTTCCATATA+TGG | + | chr4.4:19367034-19367053 | None:intergenic | 40.0% | |
| GCTATGATATCCACTGTTCT+TGG | + | chr4.4:19366018-19366037 | None:intergenic | 40.0% | |
| GCTTCAATTCTGCATGTCAA+TGG | + | chr4.4:19369170-19369189 | None:intergenic | 40.0% | |
| GTGCGGGTTCTTATGTTTAA+GGG | - | chr4.4:19364998-19365017 | MS.gene35150:CDS | 40.0% | |
| GTGGAGAAGAACCTAAAGAA+TGG | - | chr4.4:19366425-19366444 | MS.gene35150:CDS | 40.0% | |
| TACTGATAGCCTGTTTGGAT+TGG | + | chr4.4:19364921-19364940 | None:intergenic | 40.0% | |
| TAGCCATATCAACTACTGGT+CGG | - | chr4.4:19366681-19366700 | MS.gene35150:CDS | 40.0% | |
| TCACAATAGACATTCAGGTG+TGG | + | chr4.4:19367724-19367743 | None:intergenic | 40.0% | |
| TCACTTGCACCTTCTATACA+TGG | - | chr4.4:19366356-19366375 | MS.gene35150:CDS | 40.0% | |
| TCCCCTTCCTTCAAATACTT+TGG | + | chr4.4:19364398-19364417 | None:intergenic | 40.0% | |
| TGCAAGATATGGAAGAGAAG+AGG | - | chr4.4:19367426-19367445 | MS.gene35150:intron | 40.0% | |
| TGCATTATGCTAGAGGATAG+TGG | - | chr4.4:19365514-19365533 | MS.gene35150:intron | 40.0% | |
| TGCTTATCTACCTCCATCAA+TGG | + | chr4.4:19367318-19367337 | None:intergenic | 40.0% | |
| TGTGCGGGTTCTTATGTTTA+AGG | - | chr4.4:19364997-19365016 | MS.gene35150:CDS | 40.0% | |
| TGTTTGTATCCAGACTCACT+TGG | - | chr4.4:19365398-19365417 | MS.gene35150:intron | 40.0% | |
| TTGAAACCTGGAAGGACAAA+TGG | + | chr4.4:19368574-19368593 | None:intergenic | 40.0% | |
| TTGAGCCCCATAAGAAAAGT+TGG | + | chr4.4:19368213-19368232 | None:intergenic | 40.0% | |
| TTGGTCAATGGTCAATGATG+TGG | - | chr4.4:19365041-19365060 | MS.gene35150:CDS | 40.0% | |
| ! | ACCAGTAGTTGATATGGCTA+AGG | + | chr4.4:19366681-19366700 | None:intergenic | 40.0% |
| ! | CCAGTAGTTGATATGGCTAA+GGG | + | chr4.4:19366680-19366699 | None:intergenic | 40.0% |
| ! | CCCAGCTTTAGCAATAGTTA+CGG | + | chr4.4:19366962-19366981 | None:intergenic | 40.0% |
| ! | CCCTTCCAACTTTTCTTATG+GGG | - | chr4.4:19368205-19368224 | MS.gene35150:intron | 40.0% |
| ! | GATTAGGATTAGGCACTGTT+TGG | - | chr4.4:19364680-19364699 | MS.gene35150:intron | 40.0% |
| ! | TTTATTGATGCTTGGTGGAG+TGG | - | chr4.4:19366406-19366425 | MS.gene35150:CDS | 40.0% |
| !! | AAACGTTTTCTGGCATTTGG+CGG | + | chr4.4:19368357-19368376 | None:intergenic | 40.0% |
| !! | ATCAGACTTTGAAACCTGGA+AGG | + | chr4.4:19368582-19368601 | None:intergenic | 40.0% |
| !! | ATTTTCAGGAACTTCCTGCA+TGG | + | chr4.4:19365977-19365996 | None:intergenic | 40.0% |
| !! | CAACATCAGACTTTGAAACC+TGG | + | chr4.4:19368586-19368605 | None:intergenic | 40.0% |
| !!! | CCGCAATTGGTGTTATCTTT+TGG | - | chr4.4:19365585-19365604 | MS.gene35150:intron | 40.0% |
| !!! | TTACTTTTAGAACCACGGTC+AGG | + | chr4.4:19368734-19368753 | None:intergenic | 40.0% |
| AACGAAATCGATGCATACGC+AGG | + | chr4.4:19367292-19367311 | None:intergenic | 45.0% | |
| AACGAGCATTAAGTGAGGCA+TGG | + | chr4.4:19366987-19367006 | None:intergenic | 45.0% | |
| AATGCATAACATGCCACCCA+AGG | + | chr4.4:19365500-19365519 | None:intergenic | 45.0% | |
| ACTGCAACGAGCATTAAGTG+AGG | + | chr4.4:19366992-19367011 | None:intergenic | 45.0% | |
| ACTTAATGCTCGTTGCAGTG+TGG | - | chr4.4:19366993-19367012 | MS.gene35150:CDS | 45.0% | |
| ACTTATCAATGCAGGTGAGG+CGG | - | chr4.4:19367390-19367409 | MS.gene35150:CDS | 45.0% | |
| AGATGTTGACGATTAAGCGG+CGG | + | chr4.4:19364186-19364205 | None:intergenic | 45.0% | |
| AGCCATATCAACTACTGGTC+GGG | - | chr4.4:19366682-19366701 | MS.gene35150:CDS | 45.0% | |
| AGCGCATATGCTGACCAAAT+AGG | + | chr4.4:19369202-19369221 | None:intergenic | 45.0% | |
| AGTTGAGACTTGGCAACAGA+TGG | + | chr4.4:19366632-19366651 | None:intergenic | 45.0% | |
| ATGTTATGCAGGCAGAGGTA+AGG | - | chr4.4:19365311-19365330 | MS.gene35150:intron | 45.0% | |
| CACTAGCTAGCAACACTGTT+TGG | + | chr4.4:19364870-19364889 | None:intergenic | 45.0% | |
| CACTCATAGGTTCTCTCGTA+AGG | - | chr4.4:19365689-19365708 | MS.gene35150:intron | 45.0% | |
| CAGGATCTGTTTATCCCACA+AGG | - | chr4.4:19365806-19365825 | MS.gene35150:CDS | 45.0% | |
| CCCTTAGCCATATCAACTAC+TGG | - | chr4.4:19366677-19366696 | MS.gene35150:CDS | 45.0% | |
| CGGAGATGTTGACGATTAAG+CGG | + | chr4.4:19364189-19364208 | None:intergenic | 45.0% | |
| GAATCTCCATTTGTCCTTCC+AGG | - | chr4.4:19368565-19368584 | MS.gene35150:intron | 45.0% | |
| GATGTTATCAATAGAGGGGC+AGG | - | chr4.4:19369260-19369279 | MS.gene35150:CDS | 45.0% | |
| GCAGCTGCAAATCCCATATA+TGG | - | chr4.4:19367018-19367037 | MS.gene35150:CDS | 45.0% | |
| GCAGTGTGAATGGTGTATTC+AGG | - | chr4.4:19366124-19366143 | MS.gene35150:CDS | 45.0% | |
| GCCCCATAAGAAAAGTTGGA+AGG | + | chr4.4:19368209-19368228 | None:intergenic | 45.0% | |
| GCGATCGTGTAGCTATTGTT+GGG | - | chr4.4:19366070-19366089 | MS.gene35150:CDS | 45.0% | |
| GCGCATATGCTGACCAAATA+GGG | + | chr4.4:19369201-19369220 | None:intergenic | 45.0% | |
| GCTCTTCCAGGAAAAAGCAA+AGG | - | chr4.4:19366102-19366121 | MS.gene35150:CDS | 45.0% | |
| GGAGAAAGAAGGTTAGAAGC+TGG | - | chr4.4:19366835-19366854 | MS.gene35150:intron | 45.0% | |
| GGATCTTGTGATTACCCTTG+TGG | + | chr4.4:19365824-19365843 | None:intergenic | 45.0% | |
| GGGATATATAAGGCTCTTCC+AGG | - | chr4.4:19366090-19366109 | MS.gene35150:CDS | 45.0% | |
| GTAACTCGGCGAGAAACAAA+AGG | + | chr4.4:19364446-19364465 | None:intergenic | 45.0% | |
| GTGGGATAAACAGATCCTGT+GGG | + | chr4.4:19365805-19365824 | None:intergenic | 45.0% | |
| GTTCAATAAAGCAAGGGCAG+AGG | + | chr4.4:19366177-19366196 | None:intergenic | 45.0% | |
| GTTCCTGAAAATTCTGCACC+TGG | - | chr4.4:19365985-19366004 | MS.gene35150:intron | 45.0% | |
| TACATCTGCAGAGCTGTAAG+TGG | + | chr4.4:19369288-19369307 | None:intergenic | 45.0% | |
| TAGACATGTTATGCAGGCAG+AGG | - | chr4.4:19365306-19365325 | MS.gene35150:intron | 45.0% | |
| TAGCTCAACATCAGATGCCA+TGG | - | chr4.4:19369003-19369022 | MS.gene35150:intron | 45.0% | |
| TATGCATTTGGCACCCTCAT+TGG | - | chr4.4:19368449-19368468 | MS.gene35150:intron | 45.0% | |
| TCAGGTGTGGCAATAGCAAA+AGG | + | chr4.4:19367711-19367730 | None:intergenic | 45.0% | |
| TCATCAAACCTTGTCCATGC+AGG | - | chr4.4:19365960-19365979 | MS.gene35150:intron | 45.0% | |
| TGATTGATTGCTGTGGATGC+AGG | - | chr4.4:19366204-19366223 | MS.gene35150:CDS | 45.0% | |
| TGCTCTCAAGAGTTGAGACT+TGG | + | chr4.4:19366642-19366661 | None:intergenic | 45.0% | |
| TGGCAGTTGAAAGACCTTTC+AGG | + | chr4.4:19369073-19369092 | None:intergenic | 45.0% | |
| TGTATCCAGACTCACTTGGT+TGG | - | chr4.4:19365402-19365421 | MS.gene35150:intron | 45.0% | |
| TGTGGGATAAACAGATCCTG+TGG | + | chr4.4:19365806-19365825 | None:intergenic | 45.0% | |
| ! | AACGTTTTGCAGCCCAAAAG+TGG | - | chr4.4:19368231-19368250 | MS.gene35150:intron | 45.0% |
| ! | AACTTGCTTGTGACCGAGTA+TGG | - | chr4.4:19365919-19365938 | MS.gene35150:intron | 45.0% |
| ! | AGGTTCTATGGTTTGTGTCG+AGG | - | chr4.4:19364493-19364512 | MS.gene35150:intron | 45.0% |
| ! | CATGATGGGAGTGCAAGATA+TGG | - | chr4.4:19367415-19367434 | MS.gene35150:intron | 45.0% |
| ! | GGTTCTATGGTTTGTGTCGA+GGG | - | chr4.4:19364494-19364513 | MS.gene35150:intron | 45.0% |
| ! | TCTAATTTGGGTTTGCCCAC+AGG | - | chr4.4:19365787-19365806 | MS.gene35150:CDS | 45.0% |
| ! | TGACCAGGTGCAGAATTTTC+AGG | + | chr4.4:19365991-19366010 | None:intergenic | 45.0% |
| !! | GAGCAGAAAGGTACTGTACT+TGG | - | chr4.4:19368039-19368058 | MS.gene35150:intron | 45.0% |
| !! | GCGTATGCATCGATTTCGTT+CGG | - | chr4.4:19367292-19367311 | MS.gene35150:CDS | 45.0% |
| !! | TGAGGTATCGTCTACTTCCA+TGG | + | chr4.4:19369023-19369042 | None:intergenic | 45.0% |
| !!! | ACACTGCCTTTGCTTTTTCC+TGG | + | chr4.4:19366111-19366130 | None:intergenic | 45.0% |
| !!! | ATATTTGATAATTTAAATTT+GGG | + | chr4.4:19365276-19365295 | None:intergenic | 5.0% |
| !!! | TATATTTGATAATTTAAATT+TGG | + | chr4.4:19365277-19365296 | None:intergenic | 5.0% |
| AAGGTTAGAAGCTGGGGCAA+TGG | - | chr4.4:19366843-19366862 | MS.gene35150:intron | 50.0% | |
| ACAATAGCTACACGATCGCC+AGG | + | chr4.4:19366069-19366088 | None:intergenic | 50.0% | |
| ACTTCCGCGACTTAGGAAAC+AGG | - | chr4.4:19364218-19364237 | MS.gene35150:intron | 50.0% | |
| AGAAGAGAGGGAAAGGGAAC+TGG | - | chr4.4:19368673-19368692 | MS.gene35150:intron | 50.0% | |
| AGCGTGAAGAAGAGAGGGAA+AGG | - | chr4.4:19368666-19368685 | MS.gene35150:intron | 50.0% | |
| AGGAACTTCCTGCATGGACA+AGG | + | chr4.4:19365971-19365990 | None:intergenic | 50.0% | |
| AGGGCTGACGGTGAAAATGA+TGG | - | chr4.4:19368707-19368726 | MS.gene35150:intron | 50.0% | |
| AGGTCTTCAGGGCTGTAGAT+TGG | + | chr4.4:19366281-19366300 | None:intergenic | 50.0% | |
| AGGTTCTCTCGTAAGGCCAA+AGG | - | chr4.4:19365696-19365715 | MS.gene35150:intron | 50.0% | |
| AGTGAGACCAACAGCAGGTT+GGG | + | chr4.4:19369050-19369069 | None:intergenic | 50.0% | |
| CAGGCTTGCAAGAATCAACG+AGG | + | chr4.4:19366050-19366069 | None:intergenic | 50.0% | |
| CGAACCTGTTTCCTAAGTCG+CGG | + | chr4.4:19364225-19364244 | None:intergenic | 50.0% | |
| CGATTTCGTTCGGCCATTGA+TGG | - | chr4.4:19367302-19367321 | MS.gene35150:CDS | 50.0% | |
| CTCTCTCTCTCTCTCTCTCA+AGG | - | chr4.4:19369418-19369437 | MS.gene35150:CDS | 50.0% | |
| GAAAATGATGGTCCTGACCG+TGG | - | chr4.4:19368719-19368738 | MS.gene35150:intron | 50.0% | |
| GAAGGGGAACAAGTTCTCGT+TGG | - | chr4.4:19364410-19364429 | MS.gene35150:CDS | 50.0% | |
| GCAATGGTTCTTGCTGACAG+AGG | - | chr4.4:19366859-19366878 | MS.gene35150:intron | 50.0% | |
| GCAGGACGTGCTCTGATATT+TGG | + | chr4.4:19367274-19367293 | None:intergenic | 50.0% | |
| GCCATATCAACTACTGGTCG+GGG | - | chr4.4:19366683-19366702 | MS.gene35150:CDS | 50.0% | |
| GCGTGAAGAAGAGAGGGAAA+GGG | - | chr4.4:19368667-19368686 | MS.gene35150:intron | 50.0% | |
| GGATGAGCGTGAAGAAGAGA+GGG | - | chr4.4:19368661-19368680 | MS.gene35150:intron | 50.0% | |
| GGCGATCGTGTAGCTATTGT+TGG | - | chr4.4:19366069-19366088 | MS.gene35150:CDS | 50.0% | |
| GTAATATCACCTCGTCGGTC+AGG | + | chr4.4:19367597-19367616 | None:intergenic | 50.0% | |
| GTGATTGTGTTCAGCACTCG+TGG | - | chr4.4:19368537-19368556 | MS.gene35150:intron | 50.0% | |
| TAATGCTCGTTGCAGTGTGG+TGG | - | chr4.4:19366996-19367015 | MS.gene35150:CDS | 50.0% | |
| TGGATGAGCGTGAAGAAGAG+AGG | - | chr4.4:19368660-19368679 | MS.gene35150:intron | 50.0% | |
| TGTGAAGTTGCTGGGATGTG+CGG | - | chr4.4:19364981-19365000 | MS.gene35150:CDS | 50.0% | |
| TTCCTAAGTCGCGGAAGTTG+TGG | + | chr4.4:19364216-19364235 | None:intergenic | 50.0% | |
| TTTCGTTCGGCCATTGATGG+AGG | - | chr4.4:19367305-19367324 | MS.gene35150:CDS | 50.0% | |
| ! | ACCCCGACCAGTAGTTGATA+TGG | + | chr4.4:19366687-19366706 | None:intergenic | 50.0% |
| ! | CTGTTGGTCTCACTCCTGAA+AGG | - | chr4.4:19369056-19369075 | MS.gene35150:intron | 50.0% |
| !! | CTCGTTGATTCTTGCAAGCC+TGG | - | chr4.4:19366048-19366067 | MS.gene35150:CDS | 50.0% |
| ACTACTGGTCGGGGTTCTTC+TGG | - | chr4.4:19366692-19366711 | MS.gene35150:CDS | 55.0% | |
| ACTGTTCTTGGGAGCTGACC+AGG | + | chr4.4:19366006-19366025 | None:intergenic | 55.0% | |
| AGAGGGAAAGGGAACTGGAG+AGG | - | chr4.4:19368678-19368697 | MS.gene35150:intron | 55.0% | |
| ATCGCGGCTTGTGAAGCTTC+CGG | + | chr4.4:19365752-19365771 | None:intergenic | 55.0% | |
| CTACTGGTCGGGGTTCTTCT+GGG | - | chr4.4:19366693-19366712 | MS.gene35150:CDS | 55.0% | |
| CTCCACAACTTCCGCGACTT+AGG | - | chr4.4:19364211-19364230 | MS.gene35150:intron | 55.0% | |
| CTTGTGAAGCTTCCGGTGGT+GGG | + | chr4.4:19365745-19365764 | None:intergenic | 55.0% | |
| GAAGATCCCTCGGCGTAACT+CGG | + | chr4.4:19364460-19364479 | None:intergenic | 55.0% | |
| GAGTGAGACCAACAGCAGGT+TGG | + | chr4.4:19369051-19369070 | None:intergenic | 55.0% | |
| GCAATCTGCTCAGATGCCTG+TGG | + | chr4.4:19367810-19367829 | None:intergenic | 55.0% | |
| GCATATGCGCTCCAACCGTT+TGG | - | chr4.4:19369211-19369230 | MS.gene35150:CDS | 55.0% | |
| GCGGTTACCGAAGTTGTTCG+TGG | - | chr4.4:19364365-19364384 | MS.gene35150:CDS | 55.0% | |
| GTCGCGGAAGTTGTGGAGAT+CGG | + | chr4.4:19364209-19364228 | None:intergenic | 55.0% | |
| GTGAAGTTGCTGGGATGTGC+GGG | - | chr4.4:19364982-19365001 | MS.gene35150:CDS | 55.0% | |
| GTTCATTTCTGCCCCACCAC+CGG | - | chr4.4:19365730-19365749 | MS.gene35150:intron | 55.0% | |
| TACTGGTCGGGGTTCTTCTG+GGG | - | chr4.4:19366694-19366713 | MS.gene35150:CDS | 55.0% | |
| TCAGAAGCCCAACCTGCTGT+TGG | - | chr4.4:19369040-19369059 | MS.gene35150:intron | 55.0% | |
| TCAGGAGTGAGACCAACAGC+AGG | + | chr4.4:19369055-19369074 | None:intergenic | 55.0% | |
| TGGTCAGCTCCCAAGAACAG+TGG | - | chr4.4:19366005-19366024 | MS.gene35150:intron | 55.0% | |
| TTGTGAAGCTTCCGGTGGTG+GGG | + | chr4.4:19365744-19365763 | None:intergenic | 55.0% | |
| ! | AACAGCAGGTTGGGCTTCTG+AGG | + | chr4.4:19369041-19369060 | None:intergenic | 55.0% |
| ! | GGAACTGGAGAGGAAGCGTA+GGG | - | chr4.4:19368688-19368707 | MS.gene35150:intron | 55.0% |
| ATCACCTCGTCGGTCAGGTC+AGG | + | chr4.4:19367592-19367611 | None:intergenic | 60.0% | |
| CAGGTGAGGCGGCACATGAT+GGG | - | chr4.4:19367401-19367420 | MS.gene35150:CDS | 60.0% | |
| CCAGTCTGCACAAAGCCAGC+AGG | + | chr4.4:19367944-19367963 | None:intergenic | 60.0% | |
| CCTGAGCTCAGCGTATGCTG+CGG | + | chr4.4:19367832-19367851 | None:intergenic | 60.0% | |
| CGATTAAGCGGCGGCGTTTG+TGG | + | chr4.4:19364177-19364196 | None:intergenic | 60.0% | |
| GCTTGTGAAGCTTCCGGTGG+TGG | + | chr4.4:19365746-19365765 | None:intergenic | 60.0% | |
| TCAACCTGACCTGACCGACG+AGG | - | chr4.4:19367585-19367604 | MS.gene35150:CDS | 60.0% | |
| TTCTCGCCGAGTTACGCCGA+GGG | - | chr4.4:19364451-19364470 | MS.gene35150:intron | 60.0% | |
| TTTCTCGCCGAGTTACGCCG+AGG | - | chr4.4:19364450-19364469 | MS.gene35150:CDS | 60.0% | |
| ! | GAGAGGAAGCGTAGGGCTGA+CGG | - | chr4.4:19368695-19368714 | MS.gene35150:intron | 60.0% |
| ! | GGGAACTGGAGAGGAAGCGT+AGG | - | chr4.4:19368687-19368706 | MS.gene35150:intron | 60.0% |
| !! | CCTGCTGGCTTTGTGCAGAC+TGG | - | chr4.4:19367941-19367960 | MS.gene35150:intron | 60.0% |
| !! | GCTGGCTTTGTGCAGACTGG+AGG | - | chr4.4:19367944-19367963 | MS.gene35150:intron | 60.0% |
| CCGCAGCATACGCTGAGCTC+AGG | - | chr4.4:19367829-19367848 | MS.gene35150:CDS | 65.0% | |
| GCAGGTGAGGCGGCACATGA+TGG | - | chr4.4:19367400-19367419 | MS.gene35150:CDS | 65.0% | |
| GCGGCTTGTGAAGCTTCCGG+TGG | + | chr4.4:19365749-19365768 | None:intergenic | 65.0% | |
| !! | GGTCGGGGTTCTTCTGGGGT+TGG | - | chr4.4:19366698-19366717 | MS.gene35150:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19363979 | 19369671 | 19363979 | ID=MS.gene35150 |
| chr4.4 | mRNA | 19363979 | 19369671 | 19363979 | ID=MS.gene35150.t1;Parent=MS.gene35150 |
| chr4.4 | exon | 19369606 | 19369671 | 19369606 | ID=MS.gene35150.t1.exon1;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19369606 | 19369671 | 19369606 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19369411 | 19369520 | 19369411 | ID=MS.gene35150.t1.exon2;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19369411 | 19369520 | 19369411 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19369120 | 19369328 | 19369120 | ID=MS.gene35150.t1.exon3;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19369120 | 19369328 | 19369120 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19367822 | 19367952 | 19367822 | ID=MS.gene35150.t1.exon4;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19367822 | 19367952 | 19367822 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19367505 | 19367743 | 19367505 | ID=MS.gene35150.t1.exon5;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19367505 | 19367743 | 19367505 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19367188 | 19367424 | 19367188 | ID=MS.gene35150.t1.exon6;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19367188 | 19367424 | 19367188 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19366895 | 19367049 | 19366895 | ID=MS.gene35150.t1.exon7;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19366895 | 19367049 | 19366895 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19366606 | 19366814 | 19366606 | ID=MS.gene35150.t1.exon8;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19366606 | 19366814 | 19366606 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19366324 | 19366489 | 19366324 | ID=MS.gene35150.t1.exon9;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19366324 | 19366489 | 19366324 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19366044 | 19366246 | 19366044 | ID=MS.gene35150.t1.exon10;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19366044 | 19366246 | 19366044 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19365778 | 19365837 | 19365778 | ID=MS.gene35150.t1.exon11;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19365778 | 19365837 | 19365778 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19365602 | 19365691 | 19365602 | ID=MS.gene35150.t1.exon12;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19365602 | 19365691 | 19365602 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19364891 | 19365063 | 19364891 | ID=MS.gene35150.t1.exon13;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19364891 | 19365063 | 19364891 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19364573 | 19364644 | 19364573 | ID=MS.gene35150.t1.exon14;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19364573 | 19364644 | 19364573 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19364328 | 19364469 | 19364328 | ID=MS.gene35150.t1.exon15;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19364328 | 19364469 | 19364328 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| chr4.4 | exon | 19363979 | 19364038 | 19363979 | ID=MS.gene35150.t1.exon16;Parent=MS.gene35150.t1 |
| chr4.4 | CDS | 19363979 | 19364038 | 19363979 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
| Gene Sequence |
| Protein sequence |