Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35150.t1 | XP_003608493.1 | 99.6 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.00E+00 | 1436.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35150.t1 | Q9FL33 | 76.5 | 786 | 161 | 9 | 1 | 772 | 1 | 776 | 0.0e+00 | 1090.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35150.t1 | G7JDY9 | 99.6 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.0e+00 | 1436.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene35150 | 0.8655 | 5.65E-65 | -1.69E-46 |
MS.gene049596 | MS.gene35150 | 0.819983 | 8.72E-53 | -1.69E-46 |
MS.gene049622 | MS.gene35150 | 0.823924 | 1.07E-53 | -1.69E-46 |
MS.gene049660 | MS.gene35150 | 0.805461 | 1.32E-49 | -1.69E-46 |
MS.gene04985 | MS.gene35150 | 0.847667 | 1.00E-59 | -1.69E-46 |
MS.gene049989 | MS.gene35150 | 0.910413 | 1.93E-82 | -1.69E-46 |
MS.gene050297 | MS.gene35150 | 0.869641 | 2.66E-66 | -1.69E-46 |
MS.gene05054 | MS.gene35150 | 0.813824 | 2.11E-51 | -1.69E-46 |
MS.gene050648 | MS.gene35150 | 0.844329 | 8.09E-59 | -1.69E-46 |
MS.gene051087 | MS.gene35150 | 0.801658 | 8.11E-49 | -1.69E-46 |
MS.gene051094 | MS.gene35150 | 0.82689 | 2.12E-54 | -1.69E-46 |
MS.gene05124 | MS.gene35150 | 0.826041 | 3.37E-54 | -1.69E-46 |
MS.gene051263 | MS.gene35150 | 0.822521 | 2.27E-53 | -1.69E-46 |
MS.gene051339 | MS.gene35150 | 0.806409 | 8.34E-50 | -1.69E-46 |
MS.gene051423 | MS.gene35150 | 0.834112 | 3.62E-56 | -1.69E-46 |
MS.gene051629 | MS.gene35150 | 0.839419 | 1.60E-57 | -1.69E-46 |
MS.gene051742 | MS.gene35150 | 0.823569 | 1.29E-53 | -1.69E-46 |
MS.gene051816 | MS.gene35150 | 0.86893 | 4.53E-66 | -1.69E-46 |
MS.gene051896 | MS.gene35150 | 0.812495 | 4.12E-51 | -1.69E-46 |
MS.gene051914 | MS.gene35150 | 0.808824 | 2.56E-50 | -1.69E-46 |
MS.gene051955 | MS.gene35150 | 0.843505 | 1.34E-58 | -1.69E-46 |
MS.gene052143 | MS.gene35150 | 0.831999 | 1.21E-55 | -1.69E-46 |
MS.gene052308 | MS.gene35150 | 0.851008 | 1.17E-60 | -1.69E-46 |
MS.gene052367 | MS.gene35150 | 0.887145 | 1.85E-72 | -1.69E-46 |
MS.gene053173 | MS.gene35150 | 0.880656 | 4.58E-70 | -1.69E-46 |
MS.gene053348 | MS.gene35150 | 0.882875 | 7.22E-71 | -1.69E-46 |
MS.gene053416 | MS.gene35150 | 0.891785 | 2.89E-74 | -1.69E-46 |
MS.gene053417 | MS.gene35150 | 0.890723 | 7.61E-74 | -1.69E-46 |
MS.gene05369 | MS.gene35150 | 0.829258 | 5.69E-55 | -1.69E-46 |
MS.gene053929 | MS.gene35150 | 0.820135 | 8.05E-53 | -1.69E-46 |
MS.gene054551 | MS.gene35150 | 0.884354 | 2.06E-71 | -1.69E-46 |
MS.gene054552 | MS.gene35150 | 0.84887 | 4.65E-60 | -1.69E-46 |
MS.gene054593 | MS.gene35150 | 0.873086 | 1.93E-67 | -1.69E-46 |
MS.gene054633 | MS.gene35150 | 0.805396 | 1.36E-49 | -1.69E-46 |
MS.gene054885 | MS.gene35150 | 0.839937 | 1.17E-57 | -1.69E-46 |
MS.gene055308 | MS.gene35150 | 0.891631 | 3.33E-74 | -1.69E-46 |
MS.gene055411 | MS.gene35150 | 0.821429 | 4.06E-53 | -1.69E-46 |
MS.gene055578 | MS.gene35150 | 0.879263 | 1.44E-69 | -1.69E-46 |
MS.gene055579 | MS.gene35150 | 0.817412 | 3.34E-52 | -1.69E-46 |
MS.gene055957 | MS.gene35150 | 0.899096 | 2.78E-77 | -1.69E-46 |
MS.gene056041 | MS.gene35150 | 0.924373 | 7.68E-90 | -1.69E-46 |
MS.gene056042 | MS.gene35150 | 0.859188 | 4.92E-63 | -1.69E-46 |
MS.gene056228 | MS.gene35150 | 0.80423 | 2.39E-49 | -1.69E-46 |
MS.gene05640 | MS.gene35150 | 0.888643 | 4.92E-73 | -1.69E-46 |
MS.gene056520 | MS.gene35150 | 0.802008 | 6.88E-49 | -1.69E-46 |
MS.gene056526 | MS.gene35150 | 0.883868 | 3.12E-71 | -1.69E-46 |
MS.gene056528 | MS.gene35150 | 0.84114 | 5.69E-58 | -1.69E-46 |
MS.gene05652 | MS.gene35150 | 0.802963 | 4.37E-49 | -1.69E-46 |
MS.gene057358 | MS.gene35150 | 0.809191 | 2.14E-50 | -1.69E-46 |
MS.gene057367 | MS.gene35150 | 0.803787 | 2.95E-49 | -1.69E-46 |
MS.gene057458 | MS.gene35150 | 0.874284 | 7.61E-68 | -1.69E-46 |
MS.gene057483 | MS.gene35150 | 0.814837 | 1.26E-51 | -1.69E-46 |
MS.gene058128 | MS.gene35150 | 0.837677 | 4.51E-57 | -1.69E-46 |
MS.gene058196 | MS.gene35150 | 0.857457 | 1.61E-62 | -1.69E-46 |
MS.gene058197 | MS.gene35150 | 0.848651 | 5.35E-60 | -1.69E-46 |
MS.gene058198 | MS.gene35150 | 0.850088 | 2.13E-60 | -1.69E-46 |
MS.gene058478 | MS.gene35150 | 0.812379 | 4.37E-51 | -1.69E-46 |
MS.gene058818 | MS.gene35150 | 0.822869 | 1.88E-53 | -1.69E-46 |
MS.gene058827 | MS.gene35150 | 0.845979 | 2.90E-59 | -1.69E-46 |
MS.gene058828 | MS.gene35150 | 0.820778 | 5.73E-53 | -1.69E-46 |
MS.gene058849 | MS.gene35150 | 0.81814 | 2.29E-52 | -1.69E-46 |
MS.gene058853 | MS.gene35150 | 0.846115 | 2.66E-59 | -1.69E-46 |
MS.gene059300 | MS.gene35150 | 0.877587 | 5.58E-69 | -1.69E-46 |
MS.gene059553 | MS.gene35150 | 0.871869 | 4.92E-67 | -1.69E-46 |
MS.gene060473 | MS.gene35150 | 0.915826 | 3.71E-85 | -1.69E-46 |
MS.gene060565 | MS.gene35150 | 0.901574 | 2.33E-78 | -1.69E-46 |
MS.gene06057 | MS.gene35150 | 0.863264 | 2.82E-64 | -1.69E-46 |
MS.gene06064 | MS.gene35150 | 0.806206 | 9.20E-50 | -1.69E-46 |
MS.gene06093 | MS.gene35150 | 0.902499 | 9.11E-79 | -1.69E-46 |
MS.gene061099 | MS.gene35150 | 0.861031 | 1.37E-63 | -1.69E-46 |
MS.gene061260 | MS.gene35150 | 0.911645 | 4.81E-83 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35150.t1 | MTR_4g096700 | 99.612 | 773 | 3 | 0 | 1 | 773 | 1 | 773 | 0.0 | 1586 |
MS.gene35150.t1 | MTR_7g109480 | 34.956 | 678 | 352 | 13 | 9 | 643 | 12 | 643 | 1.36e-115 | 366 |
MS.gene35150.t1 | MTR_4g071090 | 33.385 | 650 | 356 | 12 | 28 | 653 | 155 | 751 | 9.46e-108 | 348 |
MS.gene35150.t1 | MTR_4g122270 | 34.837 | 643 | 377 | 12 | 5 | 638 | 210 | 819 | 3.15e-101 | 333 |
MS.gene35150.t1 | MTR_8g090000 | 30.936 | 737 | 392 | 16 | 28 | 707 | 37 | 713 | 1.50e-98 | 324 |
MS.gene35150.t1 | MTR_4g116870 | 34.173 | 635 | 340 | 15 | 38 | 641 | 61 | 648 | 7.50e-96 | 314 |
MS.gene35150.t1 | MTR_2g437540 | 30.055 | 722 | 392 | 15 | 14 | 679 | 20 | 684 | 1.80e-94 | 313 |
MS.gene35150.t1 | MTR_7g100680 | 34.233 | 593 | 314 | 17 | 109 | 649 | 144 | 712 | 4.62e-89 | 298 |
MS.gene35150.t1 | MTR_2g009190 | 32.386 | 528 | 301 | 11 | 117 | 635 | 128 | 608 | 3.28e-70 | 243 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35150.t1 | AT5G46280 | 74.589 | 791 | 167 | 11 | 1 | 772 | 1 | 776 | 0.0 | 1179 |
MS.gene35150.t1 | AT5G46280 | 81.346 | 654 | 110 | 6 | 1 | 652 | 1 | 644 | 0.0 | 1098 |
MS.gene35150.t1 | AT5G46280 | 81.717 | 629 | 103 | 6 | 1 | 627 | 1 | 619 | 0.0 | 1057 |
MS.gene35150.t1 | AT5G46280 | 81.552 | 580 | 95 | 6 | 1 | 578 | 1 | 570 | 0.0 | 976 |
MS.gene35150.t1 | AT4G02060 | 36.377 | 668 | 332 | 14 | 17 | 641 | 19 | 636 | 2.74e-120 | 378 |
MS.gene35150.t1 | AT4G02060 | 36.377 | 668 | 332 | 14 | 17 | 641 | 19 | 636 | 2.74e-120 | 378 |
MS.gene35150.t1 | AT2G16440 | 34.557 | 654 | 358 | 10 | 11 | 642 | 143 | 748 | 4.19e-110 | 355 |
MS.gene35150.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 208 | 821 | 4.08e-104 | 341 |
MS.gene35150.t1 | AT1G44900 | 33.643 | 645 | 388 | 9 | 3 | 638 | 210 | 823 | 4.38e-104 | 341 |
MS.gene35150.t1 | AT2G07690 | 35.837 | 639 | 327 | 16 | 33 | 639 | 53 | 640 | 4.43e-104 | 336 |
MS.gene35150.t1 | AT2G07690 | 35.793 | 637 | 328 | 16 | 33 | 639 | 53 | 638 | 2.33e-103 | 334 |
MS.gene35150.t1 | AT5G44635 | 30.882 | 748 | 390 | 16 | 19 | 701 | 29 | 714 | 1.66e-96 | 318 |
MS.gene35150.t1 | AT5G44635 | 30.882 | 748 | 390 | 16 | 19 | 701 | 29 | 714 | 3.92e-96 | 318 |
MS.gene35150.t1 | AT3G09660 | 31.269 | 646 | 380 | 13 | 106 | 711 | 143 | 764 | 1.19e-90 | 302 |
MS.gene35150.t1 | AT3G09660 | 33.048 | 584 | 333 | 11 | 106 | 649 | 143 | 708 | 1.60e-90 | 301 |
MS.gene35150.t1 | AT3G09660 | 31.424 | 646 | 382 | 12 | 106 | 711 | 143 | 767 | 2.69e-90 | 301 |
MS.gene35150.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.00e-64 | 228 |
MS.gene35150.t1 | AT2G14050 | 32.151 | 451 | 256 | 7 | 190 | 635 | 204 | 609 | 1.14e-64 | 228 |
Find 181 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGCGACATTACATCTAATT+TGG | 0.103330 | 4.4:-19367854 | MS.gene35150:CDS |
ACTACTGGTCGGGGTTCTTC+TGG | 0.126682 | 4.4:-19366936 | MS.gene35150:CDS |
GATCTTCTTTCTGAATTTAT+AGG | 0.193496 | 4.4:-19369155 | MS.gene35150:CDS |
GAAGCATTCAATTCCCTATT+TGG | 0.198726 | 4.4:-19364443 | MS.gene35150:CDS |
GCAGGACGTGCTCTGATATT+TGG | 0.229377 | 4.4:+19366357 | None:intergenic |
TTCTGAATTTATAGGTTCTA+TGG | 0.247965 | 4.4:-19369147 | MS.gene35150:CDS |
CTTTCTGCTCAACTTCAATT+TGG | 0.261333 | 4.4:+19365602 | None:intergenic |
CTACTGGTCGGGGTTCTTCT+GGG | 0.266254 | 4.4:-19366935 | MS.gene35150:CDS |
CTTCTATACATGGCCATTCT+TGG | 0.268321 | 4.4:-19367262 | MS.gene35150:CDS |
GCCACTTACAGTTCCATATA+TGG | 0.269512 | 4.4:+19366597 | None:intergenic |
TCAAATGAGTTCCATTCTTT+AGG | 0.279773 | 4.4:+19367192 | None:intergenic |
TCTAAAGTTCTGGCAGTTAT+TGG | 0.289117 | 4.4:+19365654 | None:intergenic |
TGGCAGTTGAAAGACCTTTC+AGG | 0.304074 | 4.4:+19364558 | None:intergenic |
CGCGACATTACATCTAATTT+GGG | 0.314962 | 4.4:-19367853 | MS.gene35150:CDS |
AGCGCATATGCTGACCAAAT+AGG | 0.328388 | 4.4:+19364429 | None:intergenic |
TATTATAGTTTCTAAAGTTC+TGG | 0.340428 | 4.4:+19365644 | None:intergenic |
GCTATGATATCCACTGTTCT+TGG | 0.342887 | 4.4:+19367613 | None:intergenic |
GCAGCTGCAAATCCCATATA+TGG | 0.344979 | 4.4:-19366610 | MS.gene35150:CDS |
AACTTGCTTGTGACCGAGTA+TGG | 0.352631 | 4.4:-19367709 | MS.gene35150:CDS |
AGAAGAGAGGGAAAGGGAAC+TGG | 0.357571 | 4.4:-19364955 | MS.gene35150:CDS |
GAATCCTATGCTTAGCATAA+TGG | 0.359551 | 4.4:+19366064 | None:intergenic |
TCCCCTTCCTTCAAATACTT+TGG | 0.360134 | 4.4:+19369233 | None:intergenic |
CGATTTCGTTCGGCCATTGA+TGG | 0.364561 | 4.4:-19366326 | MS.gene35150:CDS |
CGATTAAGCGGCGGCGTTTG+TGG | 0.368234 | 4.4:+19369454 | None:intergenic |
GATATTTGGCGATCAATATC+AGG | 0.372045 | 4.4:+19366371 | None:intergenic |
AGATGTATTGCTCCTGTTAG+AGG | 0.373970 | 4.4:-19364327 | MS.gene35150:intron |
GGCGATCGTGTAGCTATTGT+TGG | 0.378452 | 4.4:-19367559 | MS.gene35150:CDS |
CTCGTTGATTCTTGCAAGCC+TGG | 0.380513 | 4.4:-19367580 | MS.gene35150:CDS |
CAAGTTCTCGTTGGATTTGA+AGG | 0.381551 | 4.4:-19369209 | MS.gene35150:CDS |
TGATCTGTTGTTTATTGTGT+TGG | 0.388371 | 4.4:-19366405 | MS.gene35150:CDS |
CTGCTTTCTTTATCCAAGAA+TGG | 0.398574 | 4.4:+19367249 | None:intergenic |
CTATGATATCCACTGTTCTT+GGG | 0.402129 | 4.4:+19367614 | None:intergenic |
GGGATATATAAGGCTCTTCC+AGG | 0.405737 | 4.4:-19367538 | MS.gene35150:CDS |
TCAAAAGATGTACCTCTAAC+AGG | 0.409245 | 4.4:+19364315 | None:intergenic |
CATGATGGGAGTGCAAGATA+TGG | 0.410032 | 4.4:-19366213 | MS.gene35150:CDS |
ACCCCGACCAGTAGTTGATA+TGG | 0.413616 | 4.4:+19366944 | None:intergenic |
GCTTGTGAAGCTTCCGGTGG+TGG | 0.414230 | 4.4:+19367885 | None:intergenic |
ACATCCTCTATGTCTGCAAT+AGG | 0.414915 | 4.4:+19364386 | None:intergenic |
CAAGAATGGCCATGTATAGA+AGG | 0.416117 | 4.4:+19367263 | None:intergenic |
GCAGTGTGAATGGTGTATTC+AGG | 0.418297 | 4.4:-19367504 | MS.gene35150:intron |
CTTGTGAAGCTTCCGGTGGT+GGG | 0.424475 | 4.4:+19367886 | None:intergenic |
TCTAATTTGGGTTTGCCCAC+AGG | 0.425040 | 4.4:-19367841 | MS.gene35150:CDS |
GTTTATTGTGTTGGACCAAA+TGG | 0.429107 | 4.4:-19366396 | MS.gene35150:CDS |
GCGCATATGCTGACCAAATA+GGG | 0.430181 | 4.4:+19364430 | None:intergenic |
AGGTCTTCAGGGCTGTAGAT+TGG | 0.430461 | 4.4:+19367350 | None:intergenic |
AGCCATATCAACTACTGGTC+GGG | 0.431922 | 4.4:-19366946 | MS.gene35150:CDS |
AGTGAGACCAACAGCAGGTT+GGG | 0.432976 | 4.4:+19364581 | None:intergenic |
CCACTTACAGTTCCATATAT+GGG | 0.434161 | 4.4:+19366598 | None:intergenic |
ATAGAGGATGTTATCAATAG+AGG | 0.435851 | 4.4:-19364374 | MS.gene35150:CDS |
GTTACTTCAGATCAAGAAAC+AGG | 0.437032 | 4.4:-19366894 | MS.gene35150:intron |
TCATAAAGAACTGACAGAAA+TGG | 0.437741 | 4.4:-19364988 | MS.gene35150:CDS |
GTTGAGAAGAGATACATTGT+TGG | 0.438233 | 4.4:+19367388 | None:intergenic |
GCATATGCGCTCCAACCGTT+TGG | 0.444476 | 4.4:-19364417 | MS.gene35150:CDS |
CTCCACAACTTCCGCGACTT+AGG | 0.449467 | 4.4:-19369417 | MS.gene35150:CDS |
ACTGTTCTTGGGAGCTGACC+AGG | 0.451812 | 4.4:+19367625 | None:intergenic |
GGTTCTATGGTTTGTGTCGA+GGG | 0.452369 | 4.4:-19369134 | MS.gene35150:CDS |
GGTCGGGGTTCTTCTGGGGT+TGG | 0.454303 | 4.4:-19366930 | MS.gene35150:CDS |
ATCGCGGCTTGTGAAGCTTC+CGG | 0.460196 | 4.4:+19367879 | None:intergenic |
AGCGTGAAGAAGAGAGGGAA+AGG | 0.461495 | 4.4:-19364962 | MS.gene35150:CDS |
ACCGTAACTATTGCTAAAGC+TGG | 0.461797 | 4.4:-19366670 | MS.gene35150:CDS |
GTAATATCACCTCGTCGGTC+AGG | 0.470980 | 4.4:+19366034 | None:intergenic |
ATCACCTCGTCGGTCAGGTC+AGG | 0.472355 | 4.4:+19366039 | None:intergenic |
AGCTATTGTTGGGATATATA+AGG | 0.475943 | 4.4:-19367548 | MS.gene35150:CDS |
CACTCATAGGTTCTCTCGTA+AGG | 0.476726 | 4.4:-19367939 | MS.gene35150:intron |
CCGCAGCATACGCTGAGCTC+AGG | 0.478922 | 4.4:-19365799 | MS.gene35150:CDS |
TGTAGCTATACACGAAGTTA+TGG | 0.479537 | 4.4:-19366701 | MS.gene35150:CDS |
GCAGGTGAGGCGGCACATGA+TGG | 0.487147 | 4.4:-19366228 | MS.gene35150:intron |
ACTTCCGCGACTTAGGAAAC+AGG | 0.488263 | 4.4:-19369410 | MS.gene35150:intron |
GATCAATATCAGGATCCATT+TGG | 0.488984 | 4.4:+19366381 | None:intergenic |
GAGAAAGAAGGTTAGAAGCT+GGG | 0.489696 | 4.4:-19366792 | MS.gene35150:CDS |
TGCTTATCTACCTCCATCAA+TGG | 0.489979 | 4.4:+19366313 | None:intergenic |
AAGAATGGAACTCATTTGAG+AGG | 0.490629 | 4.4:-19367188 | MS.gene35150:CDS |
CCCTTAGCCATATCAACTAC+TGG | 0.490846 | 4.4:-19366951 | MS.gene35150:CDS |
GCGTATGCATCGATTTCGTT+CGG | 0.491063 | 4.4:-19366336 | MS.gene35150:CDS |
GGAGAAAGAAGGTTAGAAGC+TGG | 0.494652 | 4.4:-19366793 | MS.gene35150:CDS |
TGGATGAGCGTGAAGAAGAG+AGG | 0.506377 | 4.4:-19364968 | MS.gene35150:CDS |
TAGAGGATGTTATCAATAGA+GGG | 0.506627 | 4.4:-19364373 | MS.gene35150:CDS |
ATCCAAAGTATTTGAAGGAA+GGG | 0.508850 | 4.4:-19369235 | MS.gene35150:CDS |
TACTGGTCGGGGTTCTTCTG+GGG | 0.512239 | 4.4:-19366934 | MS.gene35150:CDS |
ACCAGTAGTTGATATGGCTA+AGG | 0.512348 | 4.4:+19366950 | None:intergenic |
CCCAGCTTTAGCAATAGTTA+CGG | 0.512480 | 4.4:+19366669 | None:intergenic |
TTCCTAAGTCGCGGAAGTTG+TGG | 0.513194 | 4.4:+19369415 | None:intergenic |
CAATAGGTATTTGATCCAAA+CGG | 0.513204 | 4.4:+19364402 | None:intergenic |
TAGTGACATTAATATGATGA+TGG | 0.514077 | 4.4:-19367030 | MS.gene35150:CDS |
GATGTTATCAATAGAGGGGC+AGG | 0.514272 | 4.4:-19364368 | MS.gene35150:CDS |
AAAAGCAAAGGCAGTGTGAA+TGG | 0.514455 | 4.4:-19367514 | MS.gene35150:CDS |
AGGTTCTATGGTTTGTGTCG+AGG | 0.516449 | 4.4:-19369135 | MS.gene35150:CDS |
AGCTGATGGAATAGTGCATA+TGG | 0.519463 | 4.4:-19363987 | MS.gene35150:CDS |
GATCCAAAGTATTTGAAGGA+AGG | 0.524402 | 4.4:-19369236 | MS.gene35150:CDS |
CTGTTGGTCTCACTCCTGAA+AGG | 0.524781 | 4.4:-19364572 | MS.gene35150:intron |
GTGGAGAAGAACCTAAAGAA+TGG | 0.527656 | 4.4:-19367203 | MS.gene35150:CDS |
TACATCTGCAGAGCTGTAAG+TGG | 0.528161 | 4.4:+19364343 | None:intergenic |
GTTCATTTCTGCCCCACCAC+CGG | 0.530449 | 4.4:-19367898 | MS.gene35150:CDS |
GTAACTCGGCGAGAAACAAA+AGG | 0.531202 | 4.4:+19369185 | None:intergenic |
GCGATCGTGTAGCTATTGTT+GGG | 0.531638 | 4.4:-19367558 | MS.gene35150:CDS |
TCACTTGCACCTTCTATACA+TGG | 0.532357 | 4.4:-19367272 | MS.gene35150:CDS |
GATCTTGTGATTACCCTTGT+GGG | 0.532708 | 4.4:+19367808 | None:intergenic |
GTATTTGCACATTCCATACT+CGG | 0.534916 | 4.4:+19367696 | None:intergenic |
TCATCAAACCTTGTCCATGC+AGG | 0.536771 | 4.4:-19367668 | MS.gene35150:CDS |
AGTTGAGACTTGGCAACAGA+TGG | 0.538574 | 4.4:+19366999 | None:intergenic |
TAGTGATCCAAAGTATTTGA+AGG | 0.539186 | 4.4:-19369240 | MS.gene35150:CDS |
TTTATTGATGCTTGGTGGAG+TGG | 0.540439 | 4.4:-19367222 | MS.gene35150:CDS |
GTCGCGGAAGTTGTGGAGAT+CGG | 0.540703 | 4.4:+19369422 | None:intergenic |
TGCAAGATATGGAAGAGAAG+AGG | 0.544193 | 4.4:-19366202 | MS.gene35150:CDS |
TGCTCTCAAGAGTTGAGACT+TGG | 0.546404 | 4.4:+19366989 | None:intergenic |
GGATGAGCGTGAAGAAGAGA+GGG | 0.547538 | 4.4:-19364967 | MS.gene35150:CDS |
AAATATAACAGAATGCTACA+TGG | 0.553194 | 4.4:-19366150 | MS.gene35150:CDS |
CAGGTGAGGCGGCACATGAT+GGG | 0.554148 | 4.4:-19366227 | MS.gene35150:CDS |
GCGGTTACCGAAGTTGTTCG+TGG | 0.554563 | 4.4:-19369263 | MS.gene35150:CDS |
ACAATAGCTACACGATCGCC+AGG | 0.554581 | 4.4:+19367562 | None:intergenic |
AGGAACTTCCTGCATGGACA+AGG | 0.555183 | 4.4:+19367660 | None:intergenic |
AGAGGGAAAGGGAACTGGAG+AGG | 0.555234 | 4.4:-19364950 | MS.gene35150:CDS |
AGAAAGAAGGTTAGAAGCTG+GGG | 0.555415 | 4.4:-19366791 | MS.gene35150:CDS |
CAAATTGAAGTTGAGCAGAA+AGG | 0.555939 | 4.4:-19365601 | MS.gene35150:intron |
AACAGCAGGTTGGGCTTCTG+AGG | 0.561016 | 4.4:+19364590 | None:intergenic |
AATAGATTAATGATAGCTGA+TGG | 0.561185 | 4.4:-19364001 | MS.gene35150:CDS |
TGTTTATTGCAGGATGAAAG+TGG | 0.562229 | 4.4:-19367733 | MS.gene35150:intron |
GAAGATCCCTCGGCGTAACT+CGG | 0.562743 | 4.4:+19369171 | None:intergenic |
GAAGGGGAACAAGTTCTCGT+TGG | 0.563161 | 4.4:-19369218 | MS.gene35150:CDS |
CAGGATCTGTTTATCCCACA+AGG | 0.565225 | 4.4:-19367822 | MS.gene35150:CDS |
AATACCTATTGCAGACATAG+AGG | 0.567260 | 4.4:-19364390 | MS.gene35150:CDS |
GCTGGCTTTGTGCAGACTGG+AGG | 0.568451 | 4.4:-19365684 | MS.gene35150:intron |
AATGATTGCATATACTCACT+TGG | 0.571052 | 4.4:+19369293 | None:intergenic |
TAGCTCAACATCAGATGCCA+TGG | 0.571126 | 4.4:-19364625 | MS.gene35150:CDS |
TGAGGTATCGTCTACTTCCA+TGG | 0.571458 | 4.4:+19364608 | None:intergenic |
GTTCCTGAAAATTCTGCACC+TGG | 0.572249 | 4.4:-19367643 | MS.gene35150:CDS |
AATCGAGAAAGCAAAGAGTC+CGG | 0.573316 | 4.4:+19366428 | None:intergenic |
TTTCGTTCGGCCATTGATGG+AGG | 0.573515 | 4.4:-19366323 | MS.gene35150:intron |
GTATGGAATGTGCAAATACA+AGG | 0.573655 | 4.4:-19367692 | MS.gene35150:CDS |
AGGGCTGACGGTGAAAATGA+TGG | 0.574482 | 4.4:-19364921 | MS.gene35150:CDS |
GCGTGAAGAAGAGAGGGAAA+GGG | 0.575235 | 4.4:-19364961 | MS.gene35150:CDS |
GCCATATCAACTACTGGTCG+GGG | 0.576917 | 4.4:-19366945 | MS.gene35150:CDS |
TCCAAAGTATTTGAAGGAAG+GGG | 0.578778 | 4.4:-19369234 | MS.gene35150:CDS |
AAGGTTAGAAGCTGGGGCAA+TGG | 0.578812 | 4.4:-19366785 | MS.gene35150:CDS |
GACATTAATATGATGATGGT+TGG | 0.581184 | 4.4:-19367026 | MS.gene35150:CDS |
ATCACTACCACGAACAACTT+CGG | 0.581462 | 4.4:+19369256 | None:intergenic |
GGGAACTGGAGAGGAAGCGT+AGG | 0.584238 | 4.4:-19364941 | MS.gene35150:CDS |
GAGAGGAAGCGTAGGGCTGA+CGG | 0.585761 | 4.4:-19364933 | MS.gene35150:CDS |
AGGTATTTGATCCAAACGGT+TGG | 0.589006 | 4.4:+19364406 | None:intergenic |
TCAGAAGCCCAACCTGCTGT+TGG | 0.593759 | 4.4:-19364588 | MS.gene35150:CDS |
TAGCCATATCAACTACTGGT+CGG | 0.594899 | 4.4:-19366947 | MS.gene35150:CDS |
CCGTAACTATTGCTAAAGCT+GGG | 0.595027 | 4.4:-19366669 | MS.gene35150:CDS |
AATTCAGAAAGAAGATCCCT+CGG | 0.598017 | 4.4:+19369161 | None:intergenic |
CCAGTAGTTGATATGGCTAA+GGG | 0.599324 | 4.4:+19366951 | None:intergenic |
TTGTGAAGCTTCCGGTGGTG+GGG | 0.601653 | 4.4:+19367887 | None:intergenic |
GGATCTTGTGATTACCCTTG+TGG | 0.602488 | 4.4:+19367807 | None:intergenic |
AGAATGGAACTCATTTGAGA+GGG | 0.605684 | 4.4:-19367187 | MS.gene35150:intron |
TGTATCTCTTCTCAACAAAG+AGG | 0.611474 | 4.4:-19367381 | MS.gene35150:CDS |
ATATCCATTATGCTAAGCAT+AGG | 0.611548 | 4.4:-19366068 | MS.gene35150:CDS |
AGGTTCTCTCGTAAGGCCAA+AGG | 0.615602 | 4.4:-19367932 | MS.gene35150:CDS |
GAGTGAGACCAACAGCAGGT+TGG | 0.616359 | 4.4:+19364580 | None:intergenic |
TTCTCGCCGAGTTACGCCGA+GGG | 0.617425 | 4.4:-19369177 | MS.gene35150:CDS |
TCAGGAGTGAGACCAACAGC+AGG | 0.620390 | 4.4:+19364576 | None:intergenic |
AACAGTGGATATCATAGCAG+AGG | 0.624532 | 4.4:-19367608 | MS.gene35150:CDS |
GATGAGACATTTGATCTGCT+CGG | 0.628002 | 4.4:-19367299 | MS.gene35150:CDS |
GAATGCAAAGTCAAATGCGA+AGG | 0.628643 | 4.4:-19365777 | MS.gene35150:intron |
AACGAAATCGATGCATACGC+AGG | 0.631812 | 4.4:+19366339 | None:intergenic |
GGAACTGGAGAGGAAGCGTA+GGG | 0.634871 | 4.4:-19364940 | MS.gene35150:CDS |
TGTGGGATAAACAGATCCTG+TGG | 0.635018 | 4.4:+19367825 | None:intergenic |
TAATGCTCGTTGCAGTGTGG+TGG | 0.636953 | 4.4:-19366632 | MS.gene35150:CDS |
CGAACCTGTTTCCTAAGTCG+CGG | 0.638069 | 4.4:+19369406 | None:intergenic |
AACGAGCATTAAGTGAGGCA+TGG | 0.639848 | 4.4:+19366644 | None:intergenic |
TATTAGTAATATCACCTCGT+CGG | 0.642234 | 4.4:+19366029 | None:intergenic |
CGGAGATGTTGACGATTAAG+CGG | 0.642528 | 4.4:+19369442 | None:intergenic |
ACTTATCAATGCAGGTGAGG+CGG | 0.643335 | 4.4:-19366238 | MS.gene35150:intron |
ATGTAATGTCGCGATAATCG+CGG | 0.653688 | 4.4:+19367863 | None:intergenic |
GCAATGGTTCTTGCTGACAG+AGG | 0.666936 | 4.4:-19366769 | MS.gene35150:CDS |
GTGGGATAAACAGATCCTGT+GGG | 0.670399 | 4.4:+19367826 | None:intergenic |
GCGGCTTGTGAAGCTTCCGG+TGG | 0.672913 | 4.4:+19367882 | None:intergenic |
TGGTCAGCTCCCAAGAACAG+TGG | 0.674225 | 4.4:-19367623 | MS.gene35150:CDS |
TTTCTCGCCGAGTTACGCCG+AGG | 0.678265 | 4.4:-19369178 | MS.gene35150:CDS |
AGAGGATGTTATCAATAGAG+GGG | 0.680220 | 4.4:-19364372 | MS.gene35150:CDS |
CCTGAGCTCAGCGTATGCTG+CGG | 0.682238 | 4.4:+19365799 | None:intergenic |
AGATGTTGACGATTAAGCGG+CGG | 0.690438 | 4.4:+19369445 | None:intergenic |
GAAAATGATGGTCCTGACCG+TGG | 0.700214 | 4.4:-19364909 | MS.gene35150:CDS |
ACTTAATGCTCGTTGCAGTG+TGG | 0.710896 | 4.4:-19366635 | MS.gene35150:CDS |
AGGATCTGTTTATCCCACAA+GGG | 0.714764 | 4.4:-19367821 | MS.gene35150:intron |
TCAACCTGACCTGACCGACG+AGG | 0.718365 | 4.4:-19366043 | MS.gene35150:intron |
CATGGAAAGAAAACTGACAG+AGG | 0.723703 | 4.4:-19366132 | MS.gene35150:CDS |
ACTGCAACGAGCATTAAGTG+AGG | 0.755012 | 4.4:+19366639 | None:intergenic |
CAGGCTTGCAAGAATCAACG+AGG | 0.764400 | 4.4:+19367581 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAATTGTAATATATAAGA+GGG | + | chr4.4:19367659-19367678 | None:intergenic | 10.0% |
!! | ATCAAAAATCAATTATTATA+AGG | + | chr4.4:19364592-19364611 | None:intergenic | 10.0% |
!! | GAAAAATTTAATTGATATAA+GGG | + | chr4.4:19367788-19367807 | None:intergenic | 10.0% |
!! | TCAAAAATCAATTATTATAA+GGG | + | chr4.4:19364591-19364610 | None:intergenic | 10.0% |
!! | GATAAATTGTAATATATAAG+AGG | + | chr4.4:19367660-19367679 | None:intergenic | 15.0% |
!! | GGAAAAATTTAATTGATATA+AGG | + | chr4.4:19367789-19367808 | None:intergenic | 15.0% |
!!! | AATTATAATTTCTTTTTGTC+AGG | - | chr4.4:19366814-19366833 | MS.gene35150:intron | 15.0% |
!!! | ACTGAAAAATTAATTTGAAA+TGG | + | chr4.4:19368154-19368173 | None:intergenic | 15.0% |
!!! | ATTATATCACTCAATTTTTT+TGG | - | chr4.4:19366485-19366504 | MS.gene35150:intron | 15.0% |
!!! | CTATCTTTTTTATGTTTTTA+AGG | + | chr4.4:19366301-19366320 | None:intergenic | 15.0% |
!!! | TATATCTTAATTTTTACCAT+AGG | - | chr4.4:19368822-19368841 | MS.gene35150:intron | 15.0% |
!! | AAAAATAATGCTAGAAATGA+AGG | + | chr4.4:19365845-19365864 | None:intergenic | 20.0% |
!! | ATTACAATTTATCTGTTGTA+AGG | - | chr4.4:19367667-19367686 | MS.gene35150:CDS | 20.0% |
!! | ATTTAATTGATATAAGGGAT+TGG | + | chr4.4:19367783-19367802 | None:intergenic | 20.0% |
!! | CACATTTATAATTACAAAGA+CGG | + | chr4.4:19369534-19369553 | None:intergenic | 20.0% |
!! | CTAAATAAGTTTAAGAAATC+AGG | + | chr4.4:19368950-19368969 | None:intergenic | 20.0% |
!! | TAAGAAAACAAAGTTATAAG+AGG | + | chr4.4:19369104-19369123 | None:intergenic | 20.0% |
!! | TATAACACAAGATAAGATAA+AGG | - | chr4.4:19364752-19364771 | MS.gene35150:intron | 20.0% |
!! | TTGAGTGATATAATGATATA+TGG | + | chr4.4:19366479-19366498 | None:intergenic | 20.0% |
!!! | AAATATTTTAATGTGTCCTT+GGG | - | chr4.4:19365481-19365500 | MS.gene35150:intron | 20.0% |
!!! | AAATCAATAGTTCTACATAT+CGG | - | chr4.4:19367904-19367923 | MS.gene35150:CDS | 20.0% |
!!! | AAATTAGTTTATGCTATCTT+TGG | - | chr4.4:19368768-19368787 | MS.gene35150:intron | 20.0% |
!!! | AATTAGTTTATGCTATCTTT+GGG | - | chr4.4:19368769-19368788 | MS.gene35150:intron | 20.0% |
!!! | AGCATTATTTTTATTACGAA+AGG | - | chr4.4:19365853-19365872 | MS.gene35150:intron | 20.0% |
!!! | ATAATTGATTTTTGATTCCT+AGG | - | chr4.4:19364596-19364615 | MS.gene35150:CDS | 20.0% |
!!! | ATTTTTATTATAAGCTCTCT+AGG | + | chr4.4:19364820-19364839 | None:intergenic | 20.0% |
!!! | ATTTTTTTGTTGAATCAGAT+CGG | - | chr4.4:19364112-19364131 | MS.gene35150:intron | 20.0% |
!!! | TAAATATTTTAATGTGTCCT+TGG | - | chr4.4:19365480-19365499 | MS.gene35150:intron | 20.0% |
!!! | TAATTGATTTTTGATTCCTA+GGG | - | chr4.4:19364597-19364616 | MS.gene35150:CDS | 20.0% |
!!! | TATCAATTAAATTTTTCCAC+AGG | - | chr4.4:19367791-19367810 | MS.gene35150:intron | 20.0% |
!!! | TATTATAGTTTCTAAAGTTC+TGG | + | chr4.4:19367987-19368006 | None:intergenic | 20.0% |
!!! | TTATACTTTACCTTTTGTTT+TGG | - | chr4.4:19365022-19365041 | MS.gene35150:CDS | 20.0% |
! | AAAAGACAAGACAATGTAAT+TGG | + | chr4.4:19369580-19369599 | None:intergenic | 25.0% |
! | AAACAGGTAAATATTCTTCA+AGG | - | chr4.4:19366750-19366769 | MS.gene35150:CDS | 25.0% |
! | AAATATAACAGAATGCTACA+TGG | - | chr4.4:19367478-19367497 | MS.gene35150:intron | 25.0% |
! | AACTAAAAATATTGGACTAC+CGG | - | chr4.4:19367181-19367200 | MS.gene35150:intron | 25.0% |
! | AAGATTAGATGCTTTATAAC+CGG | + | chr4.4:19365556-19365575 | None:intergenic | 25.0% |
! | AATAGATTAATGATAGCTGA+TGG | - | chr4.4:19369627-19369646 | MS.gene35150:CDS | 25.0% |
! | AATGTTCTGTAATTAGGATT+TGG | + | chr4.4:19365170-19365189 | None:intergenic | 25.0% |
! | ACATAAAAAAGATAGCTGAA+AGG | - | chr4.4:19366306-19366325 | MS.gene35150:intron | 25.0% |
! | ACCCAAAAGAATCAAATAAA+CGG | + | chr4.4:19365437-19365456 | None:intergenic | 25.0% |
! | ATACATTGATACCATGTTAA+TGG | - | chr4.4:19368909-19368928 | MS.gene35150:intron | 25.0% |
! | ATTAACATACTTATCAATGC+AGG | - | chr4.4:19367382-19367401 | MS.gene35150:CDS | 25.0% |
! | CATAAAAAAGATAGCTGAAA+GGG | - | chr4.4:19366307-19366326 | MS.gene35150:intron | 25.0% |
! | GATCTTCTTTCTGAATTTAT+AGG | - | chr4.4:19364473-19364492 | MS.gene35150:intron | 25.0% |
! | GTATGTTACGAATATCTAAA+AGG | + | chr4.4:19368071-19368090 | None:intergenic | 25.0% |
! | TAGTATGATTCATGAGAAAA+CGG | - | chr4.4:19364558-19364577 | MS.gene35150:intron | 25.0% |
! | TAGTGACATTAATATGATGA+TGG | - | chr4.4:19366598-19366617 | MS.gene35150:intron | 25.0% |
! | TATATGATTACTCCTTGATT+AGG | - | chr4.4:19364664-19364683 | MS.gene35150:intron | 25.0% |
! | TATCATTTCCTAAAACTCAA+TGG | + | chr4.4:19365462-19365481 | None:intergenic | 25.0% |
! | TTAAAGAGAAGTGAAGAATT+AGG | + | chr4.4:19364052-19364071 | None:intergenic | 25.0% |
! | TTAATGTCACTAAAAGAAGA+AGG | + | chr4.4:19366590-19366609 | None:intergenic | 25.0% |
! | TTCTGAATTTATAGGTTCTA+TGG | - | chr4.4:19364481-19364500 | MS.gene35150:intron | 25.0% |
! | TTCTGTTTCATACAGATTAT+GGG | - | chr4.4:19365634-19365653 | MS.gene35150:CDS | 25.0% |
! | TTTCTGTTTCATACAGATTA+TGG | - | chr4.4:19365633-19365652 | MS.gene35150:CDS | 25.0% |
!! | AACAAGAGCATAAAAATCAT+CGG | + | chr4.4:19367760-19367779 | None:intergenic | 25.0% |
!! | AACAGATTTTTACGTTTTTC+AGG | - | chr4.4:19364300-19364319 | MS.gene35150:intron | 25.0% |
!! | AACGATGTTAATTTAGTTTC+TGG | + | chr4.4:19368866-19368885 | None:intergenic | 25.0% |
!! | ATTAGTTTATGCTATCTTTG+GGG | - | chr4.4:19368770-19368789 | MS.gene35150:intron | 25.0% |
!! | GGTAATACAACTATTCATTT+TGG | + | chr4.4:19368336-19368355 | None:intergenic | 25.0% |
!! | GTTAATTTAGTTTCTGGAAA+CGG | + | chr4.4:19368860-19368879 | None:intergenic | 25.0% |
!! | TTAATTTAGTTTCTGGAAAC+GGG | + | chr4.4:19368859-19368878 | None:intergenic | 25.0% |
!! | TTGTATTTTCAAACGTTTTC+TGG | + | chr4.4:19368367-19368386 | None:intergenic | 25.0% |
!!! | AAAGTGATAAAACCACTTTT+GGG | + | chr4.4:19368246-19368265 | None:intergenic | 25.0% |
!!! | AACTTGTTAATTTCACTCAT+AGG | - | chr4.4:19365676-19365695 | MS.gene35150:intron | 25.0% |
!!! | CATAATGGATATACTTTTTC+AGG | + | chr4.4:19367552-19367571 | None:intergenic | 25.0% |
!!! | GTAGAACTATTGATTTGTTT+CGG | + | chr4.4:19367900-19367919 | None:intergenic | 25.0% |
!!! | TAGAACTATTGATTTGTTTC+GGG | + | chr4.4:19367899-19367918 | None:intergenic | 25.0% |
!!! | TTATGTTTTTAAGGTCTTCA+GGG | + | chr4.4:19366292-19366311 | None:intergenic | 25.0% |
!!! | TTCTTTTACTTTTAGAACCA+CGG | + | chr4.4:19368739-19368758 | None:intergenic | 25.0% |
!!! | TTTATGTTTTTAAGGTCTTC+AGG | + | chr4.4:19366293-19366312 | None:intergenic | 25.0% |
AAACAGTTTACATACGAAAC+AGG | + | chr4.4:19369146-19369165 | None:intergenic | 30.0% | |
AAAGAGAGAAACTGAAAGAA+AGG | + | chr4.4:19369507-19369526 | None:intergenic | 30.0% | |
AACAAAATCGAATTCTACAG+TGG | + | chr4.4:19364272-19364291 | None:intergenic | 30.0% | |
AAGAAAAATTGTAGCCAATG+AGG | + | chr4.4:19368466-19368485 | None:intergenic | 30.0% | |
AAGAGAGAAACTGAAAGAAA+GGG | + | chr4.4:19369506-19369525 | None:intergenic | 30.0% | |
AATGATTGCATATACTCACT+TGG | + | chr4.4:19364338-19364357 | None:intergenic | 30.0% | |
ACTGACTAAATGTTTATTGC+AGG | - | chr4.4:19365885-19365904 | MS.gene35150:intron | 30.0% | |
AGAAAAATTGTAGCCAATGA+GGG | + | chr4.4:19368465-19368484 | None:intergenic | 30.0% | |
AGCTATTGTTGGGATATATA+AGG | - | chr4.4:19366080-19366099 | MS.gene35150:CDS | 30.0% | |
AGTCTTTCTTTAGTTACACT+TGG | - | chr4.4:19368171-19368190 | MS.gene35150:intron | 30.0% | |
AGTTATAAGAGGCTAAAGAT+TGG | + | chr4.4:19369093-19369112 | None:intergenic | 30.0% | |
AGTTTCTGTTCAATAAAGCA+AGG | + | chr4.4:19366184-19366203 | None:intergenic | 30.0% | |
ATAGAGGATGTTATCAATAG+AGG | - | chr4.4:19369254-19369273 | MS.gene35150:CDS | 30.0% | |
ATATCCATTATGCTAAGCAT+AGG | - | chr4.4:19367560-19367579 | MS.gene35150:CDS | 30.0% | |
ATTACTCCTTGATTAGGATT+AGG | - | chr4.4:19364670-19364689 | MS.gene35150:intron | 30.0% | |
CAAAAATGTCACCATTAACA+TGG | + | chr4.4:19368923-19368942 | None:intergenic | 30.0% | |
CAATAATTACCGACCAAATT+TGG | + | chr4.4:19365374-19365393 | None:intergenic | 30.0% | |
CAATAGGTATTTGATCCAAA+CGG | + | chr4.4:19369229-19369248 | None:intergenic | 30.0% | |
CAATTGCTCAAATATGCATT+TGG | - | chr4.4:19368437-19368456 | MS.gene35150:intron | 30.0% | |
CATTGAGTTATCATAATGTC+TGG | - | chr4.4:19369468-19369487 | MS.gene35150:CDS | 30.0% | |
CCCAAAAGAATCAAATAAAC+GGG | + | chr4.4:19365436-19365455 | None:intergenic | 30.0% | |
CTGACTCCAACTAAAAATAT+TGG | - | chr4.4:19367173-19367192 | MS.gene35150:intron | 30.0% | |
GAGCTAGTAAAAAGAAAAAC+AGG | + | chr4.4:19368989-19369008 | None:intergenic | 30.0% | |
GATAAATGTCAAGAATGTGT+TGG | + | chr4.4:19366530-19366549 | None:intergenic | 30.0% | |
GTAATCATTTCCACCAAATT+TGG | - | chr4.4:19365358-19365377 | MS.gene35150:intron | 30.0% | |
GTCTGTAATGTTCTGTAATT+AGG | + | chr4.4:19365176-19365195 | None:intergenic | 30.0% | |
GTGGAAATGATTACGATTAT+AGG | + | chr4.4:19365352-19365371 | None:intergenic | 30.0% | |
GTTTCTGTTCAATAAAGCAA+GGG | + | chr4.4:19366183-19366202 | None:intergenic | 30.0% | |
GTTTGCAAAAGTTGTAATAC+TGG | - | chr4.4:19366560-19366579 | MS.gene35150:intron | 30.0% | |
TAGAGGATGTTATCAATAGA+GGG | - | chr4.4:19369255-19369274 | MS.gene35150:CDS | 30.0% | |
TATTAGTAATATCACCTCGT+CGG | + | chr4.4:19367602-19367621 | None:intergenic | 30.0% | |
TCAAATGAGTTCCATTCTTT+AGG | + | chr4.4:19366439-19366458 | None:intergenic | 30.0% | |
TCATAAAGAACTGACAGAAA+TGG | - | chr4.4:19368640-19368659 | MS.gene35150:intron | 30.0% | |
TGTTACGAATATCTAAAAGG+TGG | + | chr4.4:19368068-19368087 | None:intergenic | 30.0% | |
TTTAGTTACACTTGGACATT+TGG | - | chr4.4:19368179-19368198 | MS.gene35150:intron | 30.0% | |
! | AATTAATTTGAAATGGCCTC+TGG | + | chr4.4:19368147-19368166 | None:intergenic | 30.0% |
! | ACCCGTTTATTTGATTCTTT+TGG | - | chr4.4:19365432-19365451 | MS.gene35150:intron | 30.0% |
! | ATCCAAAGTATTTGAAGGAA+GGG | - | chr4.4:19364393-19364412 | MS.gene35150:CDS | 30.0% |
! | ATCTGTTGTAAGGAACTTTT+GGG | - | chr4.4:19367677-19367696 | MS.gene35150:CDS | 30.0% |
! | CAAGTTGTAAAAGTACAACA+AGG | + | chr4.4:19368518-19368537 | None:intergenic | 30.0% |
! | CCCGTTTATTTGATTCTTTT+GGG | - | chr4.4:19365433-19365452 | MS.gene35150:intron | 30.0% |
! | GAAAGTGATAAAACCACTTT+TGG | + | chr4.4:19368247-19368266 | None:intergenic | 30.0% |
! | TAGTGATCCAAAGTATTTGA+AGG | - | chr4.4:19364388-19364407 | MS.gene35150:CDS | 30.0% |
! | TATCTGTTGTAAGGAACTTT+TGG | - | chr4.4:19367676-19367695 | MS.gene35150:CDS | 30.0% |
! | TATGCAATCATTTTGTGATG+CGG | - | chr4.4:19364346-19364365 | MS.gene35150:CDS | 30.0% |
! | TGAACACTTTTAACAACCTT+TGG | + | chr4.4:19365715-19365734 | None:intergenic | 30.0% |
! | TGATCTGTTGTTTATTGTGT+TGG | - | chr4.4:19367223-19367242 | MS.gene35150:CDS | 30.0% |
!! | GACATTAATATGATGATGGT+TGG | - | chr4.4:19366602-19366621 | MS.gene35150:intron | 30.0% |
!! | TGGTAATAAGAGTCATTTTC+CGG | - | chr4.4:19365534-19365553 | MS.gene35150:intron | 30.0% |
!!! | CACTCAATTTTTTTGGAAGA+TGG | - | chr4.4:19366492-19366511 | MS.gene35150:intron | 30.0% |
!!! | GGTAGTCCAATATTTTTAGT+TGG | + | chr4.4:19367182-19367201 | None:intergenic | 30.0% |
!!! | TTACCTTTTGTTTTGGTCAA+TGG | - | chr4.4:19365029-19365048 | MS.gene35150:CDS | 30.0% |
AAAAGCCACAAAGTCAAGTT+TGG | + | chr4.4:19367124-19367143 | None:intergenic | 35.0% | |
AAACAGGCAGAGTTCAATAA+TGG | + | chr4.4:19368973-19368992 | None:intergenic | 35.0% | |
AAGAATGGAACTCATTTGAG+AGG | - | chr4.4:19366440-19366459 | MS.gene35150:CDS | 35.0% | |
AATACCTATTGCAGACATAG+AGG | - | chr4.4:19369238-19369257 | MS.gene35150:CDS | 35.0% | |
AATTCAGAAAGAAGATCCCT+CGG | + | chr4.4:19364470-19364489 | None:intergenic | 35.0% | |
ACGGGAAATAAATGAACCTA+TGG | + | chr4.4:19368841-19368860 | None:intergenic | 35.0% | |
ACGTAATAGACATGTTATGC+AGG | - | chr4.4:19365300-19365319 | MS.gene35150:intron | 35.0% | |
AGAAACTTGATTGATTGCTG+TGG | - | chr4.4:19366197-19366216 | MS.gene35150:CDS | 35.0% | |
AGAATGGAACTCATTTGAGA+GGG | - | chr4.4:19366441-19366460 | MS.gene35150:CDS | 35.0% | |
AGACTTCACAATAGACATTC+AGG | + | chr4.4:19367729-19367748 | None:intergenic | 35.0% | |
AGAGAGAAACTGAAAGAAAG+GGG | + | chr4.4:19369505-19369524 | None:intergenic | 35.0% | |
AGAGGATGTTATCAATAGAG+GGG | - | chr4.4:19369256-19369275 | MS.gene35150:CDS | 35.0% | |
CAAATTGAAGTTGAGCAGAA+AGG | - | chr4.4:19368027-19368046 | MS.gene35150:intron | 35.0% | |
CATGTTATGCATTATGCTAG+AGG | - | chr4.4:19365507-19365526 | MS.gene35150:intron | 35.0% | |
CCAAAAGATAACACCAATTG+CGG | + | chr4.4:19365588-19365607 | None:intergenic | 35.0% | |
CCACTTACAGTTCCATATAT+GGG | + | chr4.4:19367033-19367052 | None:intergenic | 35.0% | |
CGCGACATTACATCTAATTT+GGG | - | chr4.4:19365775-19365794 | MS.gene35150:intron | 35.0% | |
CTATGATATCCACTGTTCTT+GGG | + | chr4.4:19366017-19366036 | None:intergenic | 35.0% | |
CTGCTTTCTTTATCCAAGAA+TGG | + | chr4.4:19366382-19366401 | None:intergenic | 35.0% | |
CTGTTTATTGTGAAGTTGCT+GGG | - | chr4.4:19364973-19364992 | MS.gene35150:CDS | 35.0% | |
CTTTCTGCTCAACTTCAATT+TGG | + | chr4.4:19368029-19368048 | None:intergenic | 35.0% | |
GAATCCTATGCTTAGCATAA+TGG | + | chr4.4:19367567-19367586 | None:intergenic | 35.0% | |
GACAATGTAATTGGAGTTTG+TGG | + | chr4.4:19369571-19369590 | None:intergenic | 35.0% | |
GATATTTGGCGATCAATATC+AGG | + | chr4.4:19367260-19367279 | None:intergenic | 35.0% | |
GATCAATATCAGGATCCATT+TGG | + | chr4.4:19367250-19367269 | None:intergenic | 35.0% | |
GGAAAGAGTAAAGGTAAAAG+CGG | + | chr4.4:19364251-19364270 | None:intergenic | 35.0% | |
GGATACTAGTGTAGCTAATA+CGG | + | chr4.4:19369361-19369380 | None:intergenic | 35.0% | |
GTATGGAATGTGCAAATACA+AGG | - | chr4.4:19365936-19365955 | MS.gene35150:intron | 35.0% | |
GTATTTGCACATTCCATACT+CGG | + | chr4.4:19365935-19365954 | None:intergenic | 35.0% | |
GTCAAGTTTGGAAGAGTTAA+AGG | + | chr4.4:19367112-19367131 | None:intergenic | 35.0% | |
GTTACTTCAGATCAAGAAAC+AGG | - | chr4.4:19366734-19366753 | MS.gene35150:CDS | 35.0% | |
GTTGAGAAGAGATACATTGT+TGG | + | chr4.4:19366243-19366262 | None:intergenic | 35.0% | |
GTTTATTGTGTTGGACCAAA+TGG | - | chr4.4:19367232-19367251 | MS.gene35150:CDS | 35.0% | |
TAATTACCGACCAAATTTGG+TGG | + | chr4.4:19365371-19365390 | None:intergenic | 35.0% | |
TATTAGCTACACTAGTATCC+AGG | - | chr4.4:19369361-19369380 | MS.gene35150:intron | 35.0% | |
TCAAAAGATGTACCTCTAAC+AGG | + | chr4.4:19369316-19369335 | None:intergenic | 35.0% | |
TCATTTCCACCAAATTTGGT+CGG | - | chr4.4:19365362-19365381 | MS.gene35150:intron | 35.0% | |
TCGCGACATTACATCTAATT+TGG | - | chr4.4:19365774-19365793 | MS.gene35150:intron | 35.0% | |
TCTGTTTATTGTGAAGTTGC+TGG | - | chr4.4:19364972-19364991 | MS.gene35150:CDS | 35.0% | |
TGACCATTGACCAAAACAAA+AGG | + | chr4.4:19365035-19365054 | None:intergenic | 35.0% | |
TGAGAATGTGATACTATTCC+TGG | + | chr4.4:19369382-19369401 | None:intergenic | 35.0% | |
TGTAGCTATACACGAAGTTA+TGG | - | chr4.4:19366927-19366946 | MS.gene35150:CDS | 35.0% | |
TGTATCTCTTCTCAACAAAG+AGG | - | chr4.4:19366247-19366266 | MS.gene35150:intron | 35.0% | |
TGTTTATTGCAGGATGAAAG+TGG | - | chr4.4:19365895-19365914 | MS.gene35150:intron | 35.0% | |
TTCTACAGTGGAAAGAGTAA+AGG | + | chr4.4:19364260-19364279 | None:intergenic | 35.0% | |
TTGAATAAGCCAATCCAAAC+AGG | - | chr4.4:19364909-19364928 | MS.gene35150:CDS | 35.0% | |
TTGAATTCTCTAGTGTATGC+AGG | + | chr4.4:19367362-19367381 | None:intergenic | 35.0% | |
! | ACCCTTCCAACTTTTCTTAT+GGG | - | chr4.4:19368204-19368223 | MS.gene35150:intron | 35.0% |
! | GAAGCATTCAATTCCCTATT+TGG | - | chr4.4:19369185-19369204 | MS.gene35150:CDS | 35.0% |
! | GATCCAAAGTATTTGAAGGA+AGG | - | chr4.4:19364392-19364411 | MS.gene35150:CDS | 35.0% |
! | GCAGTGATTTTATTGATGCT+TGG | - | chr4.4:19366398-19366417 | MS.gene35150:CDS | 35.0% |
! | GTGATTTTATTGATGCTTGG+TGG | - | chr4.4:19366401-19366420 | MS.gene35150:CDS | 35.0% |
! | TACCCTTCCAACTTTTCTTA+TGG | - | chr4.4:19368203-19368222 | MS.gene35150:intron | 35.0% |
! | TCCAAAGTATTTGAAGGAAG+GGG | - | chr4.4:19364394-19364413 | MS.gene35150:CDS | 35.0% |
! | TCTAAAGTTCTGGCAGTTAT+TGG | + | chr4.4:19367977-19367996 | None:intergenic | 35.0% |
! | TCTTTTTGTCAGGAGAAAGA+AGG | - | chr4.4:19366824-19366843 | MS.gene35150:intron | 35.0% |
! | TTGGGTATCCATTGAGTTTT+AGG | - | chr4.4:19365451-19365470 | MS.gene35150:intron | 35.0% |
!! | GATCGGAAAAAGCATTTACA+TGG | - | chr4.4:19364129-19364148 | MS.gene35150:intron | 35.0% |
!! | GTTTTGTATTGATATCCTGC+TGG | - | chr4.4:19367926-19367945 | MS.gene35150:CDS | 35.0% |
!! | TGTTAGAGGTACATCTTTTG+AGG | - | chr4.4:19369315-19369334 | MS.gene35150:intron | 35.0% |
!! | TTCAAACGTTTTCTGGCATT+TGG | + | chr4.4:19368360-19368379 | None:intergenic | 35.0% |
!!! | TATTTTAATGTGTCCTTGGG+TGG | - | chr4.4:19365484-19365503 | MS.gene35150:intron | 35.0% |
!!! | TCTTTTTTACAAGCCGCAAT+TGG | - | chr4.4:19365572-19365591 | MS.gene35150:intron | 35.0% |
AAAAGCAAAGGCAGTGTGAA+TGG | - | chr4.4:19366114-19366133 | MS.gene35150:CDS | 40.0% | |
AAACAGGCTATCAGTAGCTT+TGG | - | chr4.4:19364925-19364944 | MS.gene35150:CDS | 40.0% | |
AAAGCTACTGATAGCCTGTT+TGG | + | chr4.4:19364926-19364945 | None:intergenic | 40.0% | |
AACAAACGTAGTATGTCCAG+AGG | - | chr4.4:19368128-19368147 | MS.gene35150:intron | 40.0% | |
AACAGGCTATCAGTAGCTTT+GGG | - | chr4.4:19364926-19364945 | MS.gene35150:CDS | 40.0% | |
AACAGTGGATATCATAGCAG+AGG | - | chr4.4:19366020-19366039 | MS.gene35150:intron | 40.0% | |
AATCGAGAAAGCAAAGAGTC+CGG | + | chr4.4:19367203-19367222 | None:intergenic | 40.0% | |
AATGGTCAATGATGTGGAAG+TGG | - | chr4.4:19365047-19365066 | MS.gene35150:intron | 40.0% | |
ACAAGTTCAAGAGAAACCCT+AGG | + | chr4.4:19364616-19364635 | None:intergenic | 40.0% | |
ACAGTGCCTAATCCTAATCA+AGG | + | chr4.4:19364679-19364698 | None:intergenic | 40.0% | |
ACATCCTCTATGTCTGCAAT+AGG | + | chr4.4:19369245-19369264 | None:intergenic | 40.0% | |
ACCGTAACTATTGCTAAAGC+TGG | - | chr4.4:19366958-19366977 | MS.gene35150:CDS | 40.0% | |
ACTAGTGTAGCTAATACGGA+TGG | + | chr4.4:19369357-19369376 | None:intergenic | 40.0% | |
AGAAAGAAGGTTAGAAGCTG+GGG | - | chr4.4:19366837-19366856 | MS.gene35150:intron | 40.0% | |
AGATGTATTGCTCCTGTTAG+AGG | - | chr4.4:19369301-19369320 | MS.gene35150:CDS | 40.0% | |
AGCTGATGGAATAGTGCATA+TGG | - | chr4.4:19369641-19369660 | MS.gene35150:CDS | 40.0% | |
AGGATCTGTTTATCCCACAA+GGG | - | chr4.4:19365807-19365826 | MS.gene35150:CDS | 40.0% | |
AGGTATTTGATCCAAACGGT+TGG | + | chr4.4:19369225-19369244 | None:intergenic | 40.0% | |
ATCACTACCACGAACAACTT+CGG | + | chr4.4:19364375-19364394 | None:intergenic | 40.0% | |
ATGTAATGTCGCGATAATCG+CGG | + | chr4.4:19365768-19365787 | None:intergenic | 40.0% | |
ATGTAATTGGAGTTTGTGGC+TGG | + | chr4.4:19369567-19369586 | None:intergenic | 40.0% | |
ATTTACCAACCAAGTGAGTC+TGG | + | chr4.4:19365410-19365429 | None:intergenic | 40.0% | |
CAAGAATGGCCATGTATAGA+AGG | + | chr4.4:19366368-19366387 | None:intergenic | 40.0% | |
CAAGTTCTCGTTGGATTTGA+AGG | - | chr4.4:19364419-19364438 | MS.gene35150:CDS | 40.0% | |
CATACTTATCAATGCAGGTG+AGG | - | chr4.4:19367387-19367406 | MS.gene35150:CDS | 40.0% | |
CATGGAAAGAAAACTGACAG+AGG | - | chr4.4:19367496-19367515 | MS.gene35150:intron | 40.0% | |
CCCATATATGGAACTGTAAG+TGG | - | chr4.4:19367030-19367049 | MS.gene35150:CDS | 40.0% | |
CCCCATAAGAAAAGTTGGAA+GGG | + | chr4.4:19368208-19368227 | None:intergenic | 40.0% | |
CCGTAACTATTGCTAAAGCT+GGG | - | chr4.4:19366959-19366978 | MS.gene35150:CDS | 40.0% | |
CTCTTCCAAACTTGACTTTG+TGG | - | chr4.4:19367116-19367135 | MS.gene35150:intron | 40.0% | |
CTTCTATACATGGCCATTCT+TGG | - | chr4.4:19366366-19366385 | MS.gene35150:CDS | 40.0% | |
GAATGCAAAGTCAAATGCGA+AGG | - | chr4.4:19367851-19367870 | MS.gene35150:CDS | 40.0% | |
GAGAAAGAAGGTTAGAAGCT+GGG | - | chr4.4:19366836-19366855 | MS.gene35150:intron | 40.0% | |
GATCTTGTGATTACCCTTGT+GGG | + | chr4.4:19365823-19365842 | None:intergenic | 40.0% | |
GATGAGACATTTGATCTGCT+CGG | - | chr4.4:19366329-19366348 | MS.gene35150:CDS | 40.0% | |
GATTATGGGTTCATTCATGC+TGG | - | chr4.4:19365648-19365667 | MS.gene35150:CDS | 40.0% | |
GCCACTTACAGTTCCATATA+TGG | + | chr4.4:19367034-19367053 | None:intergenic | 40.0% | |
GCTATGATATCCACTGTTCT+TGG | + | chr4.4:19366018-19366037 | None:intergenic | 40.0% | |
GCTTCAATTCTGCATGTCAA+TGG | + | chr4.4:19369170-19369189 | None:intergenic | 40.0% | |
GTGCGGGTTCTTATGTTTAA+GGG | - | chr4.4:19364998-19365017 | MS.gene35150:CDS | 40.0% | |
GTGGAGAAGAACCTAAAGAA+TGG | - | chr4.4:19366425-19366444 | MS.gene35150:CDS | 40.0% | |
TACTGATAGCCTGTTTGGAT+TGG | + | chr4.4:19364921-19364940 | None:intergenic | 40.0% | |
TAGCCATATCAACTACTGGT+CGG | - | chr4.4:19366681-19366700 | MS.gene35150:CDS | 40.0% | |
TCACAATAGACATTCAGGTG+TGG | + | chr4.4:19367724-19367743 | None:intergenic | 40.0% | |
TCACTTGCACCTTCTATACA+TGG | - | chr4.4:19366356-19366375 | MS.gene35150:CDS | 40.0% | |
TCCCCTTCCTTCAAATACTT+TGG | + | chr4.4:19364398-19364417 | None:intergenic | 40.0% | |
TGCAAGATATGGAAGAGAAG+AGG | - | chr4.4:19367426-19367445 | MS.gene35150:intron | 40.0% | |
TGCATTATGCTAGAGGATAG+TGG | - | chr4.4:19365514-19365533 | MS.gene35150:intron | 40.0% | |
TGCTTATCTACCTCCATCAA+TGG | + | chr4.4:19367318-19367337 | None:intergenic | 40.0% | |
TGTGCGGGTTCTTATGTTTA+AGG | - | chr4.4:19364997-19365016 | MS.gene35150:CDS | 40.0% | |
TGTTTGTATCCAGACTCACT+TGG | - | chr4.4:19365398-19365417 | MS.gene35150:intron | 40.0% | |
TTGAAACCTGGAAGGACAAA+TGG | + | chr4.4:19368574-19368593 | None:intergenic | 40.0% | |
TTGAGCCCCATAAGAAAAGT+TGG | + | chr4.4:19368213-19368232 | None:intergenic | 40.0% | |
TTGGTCAATGGTCAATGATG+TGG | - | chr4.4:19365041-19365060 | MS.gene35150:CDS | 40.0% | |
! | ACCAGTAGTTGATATGGCTA+AGG | + | chr4.4:19366681-19366700 | None:intergenic | 40.0% |
! | CCAGTAGTTGATATGGCTAA+GGG | + | chr4.4:19366680-19366699 | None:intergenic | 40.0% |
! | CCCAGCTTTAGCAATAGTTA+CGG | + | chr4.4:19366962-19366981 | None:intergenic | 40.0% |
! | CCCTTCCAACTTTTCTTATG+GGG | - | chr4.4:19368205-19368224 | MS.gene35150:intron | 40.0% |
! | GATTAGGATTAGGCACTGTT+TGG | - | chr4.4:19364680-19364699 | MS.gene35150:intron | 40.0% |
! | TTTATTGATGCTTGGTGGAG+TGG | - | chr4.4:19366406-19366425 | MS.gene35150:CDS | 40.0% |
!! | AAACGTTTTCTGGCATTTGG+CGG | + | chr4.4:19368357-19368376 | None:intergenic | 40.0% |
!! | ATCAGACTTTGAAACCTGGA+AGG | + | chr4.4:19368582-19368601 | None:intergenic | 40.0% |
!! | ATTTTCAGGAACTTCCTGCA+TGG | + | chr4.4:19365977-19365996 | None:intergenic | 40.0% |
!! | CAACATCAGACTTTGAAACC+TGG | + | chr4.4:19368586-19368605 | None:intergenic | 40.0% |
!!! | CCGCAATTGGTGTTATCTTT+TGG | - | chr4.4:19365585-19365604 | MS.gene35150:intron | 40.0% |
!!! | TTACTTTTAGAACCACGGTC+AGG | + | chr4.4:19368734-19368753 | None:intergenic | 40.0% |
AACGAAATCGATGCATACGC+AGG | + | chr4.4:19367292-19367311 | None:intergenic | 45.0% | |
AACGAGCATTAAGTGAGGCA+TGG | + | chr4.4:19366987-19367006 | None:intergenic | 45.0% | |
AATGCATAACATGCCACCCA+AGG | + | chr4.4:19365500-19365519 | None:intergenic | 45.0% | |
ACTGCAACGAGCATTAAGTG+AGG | + | chr4.4:19366992-19367011 | None:intergenic | 45.0% | |
ACTTAATGCTCGTTGCAGTG+TGG | - | chr4.4:19366993-19367012 | MS.gene35150:CDS | 45.0% | |
ACTTATCAATGCAGGTGAGG+CGG | - | chr4.4:19367390-19367409 | MS.gene35150:CDS | 45.0% | |
AGATGTTGACGATTAAGCGG+CGG | + | chr4.4:19364186-19364205 | None:intergenic | 45.0% | |
AGCCATATCAACTACTGGTC+GGG | - | chr4.4:19366682-19366701 | MS.gene35150:CDS | 45.0% | |
AGCGCATATGCTGACCAAAT+AGG | + | chr4.4:19369202-19369221 | None:intergenic | 45.0% | |
AGTTGAGACTTGGCAACAGA+TGG | + | chr4.4:19366632-19366651 | None:intergenic | 45.0% | |
ATGTTATGCAGGCAGAGGTA+AGG | - | chr4.4:19365311-19365330 | MS.gene35150:intron | 45.0% | |
CACTAGCTAGCAACACTGTT+TGG | + | chr4.4:19364870-19364889 | None:intergenic | 45.0% | |
CACTCATAGGTTCTCTCGTA+AGG | - | chr4.4:19365689-19365708 | MS.gene35150:intron | 45.0% | |
CAGGATCTGTTTATCCCACA+AGG | - | chr4.4:19365806-19365825 | MS.gene35150:CDS | 45.0% | |
CCCTTAGCCATATCAACTAC+TGG | - | chr4.4:19366677-19366696 | MS.gene35150:CDS | 45.0% | |
CGGAGATGTTGACGATTAAG+CGG | + | chr4.4:19364189-19364208 | None:intergenic | 45.0% | |
GAATCTCCATTTGTCCTTCC+AGG | - | chr4.4:19368565-19368584 | MS.gene35150:intron | 45.0% | |
GATGTTATCAATAGAGGGGC+AGG | - | chr4.4:19369260-19369279 | MS.gene35150:CDS | 45.0% | |
GCAGCTGCAAATCCCATATA+TGG | - | chr4.4:19367018-19367037 | MS.gene35150:CDS | 45.0% | |
GCAGTGTGAATGGTGTATTC+AGG | - | chr4.4:19366124-19366143 | MS.gene35150:CDS | 45.0% | |
GCCCCATAAGAAAAGTTGGA+AGG | + | chr4.4:19368209-19368228 | None:intergenic | 45.0% | |
GCGATCGTGTAGCTATTGTT+GGG | - | chr4.4:19366070-19366089 | MS.gene35150:CDS | 45.0% | |
GCGCATATGCTGACCAAATA+GGG | + | chr4.4:19369201-19369220 | None:intergenic | 45.0% | |
GCTCTTCCAGGAAAAAGCAA+AGG | - | chr4.4:19366102-19366121 | MS.gene35150:CDS | 45.0% | |
GGAGAAAGAAGGTTAGAAGC+TGG | - | chr4.4:19366835-19366854 | MS.gene35150:intron | 45.0% | |
GGATCTTGTGATTACCCTTG+TGG | + | chr4.4:19365824-19365843 | None:intergenic | 45.0% | |
GGGATATATAAGGCTCTTCC+AGG | - | chr4.4:19366090-19366109 | MS.gene35150:CDS | 45.0% | |
GTAACTCGGCGAGAAACAAA+AGG | + | chr4.4:19364446-19364465 | None:intergenic | 45.0% | |
GTGGGATAAACAGATCCTGT+GGG | + | chr4.4:19365805-19365824 | None:intergenic | 45.0% | |
GTTCAATAAAGCAAGGGCAG+AGG | + | chr4.4:19366177-19366196 | None:intergenic | 45.0% | |
GTTCCTGAAAATTCTGCACC+TGG | - | chr4.4:19365985-19366004 | MS.gene35150:intron | 45.0% | |
TACATCTGCAGAGCTGTAAG+TGG | + | chr4.4:19369288-19369307 | None:intergenic | 45.0% | |
TAGACATGTTATGCAGGCAG+AGG | - | chr4.4:19365306-19365325 | MS.gene35150:intron | 45.0% | |
TAGCTCAACATCAGATGCCA+TGG | - | chr4.4:19369003-19369022 | MS.gene35150:intron | 45.0% | |
TATGCATTTGGCACCCTCAT+TGG | - | chr4.4:19368449-19368468 | MS.gene35150:intron | 45.0% | |
TCAGGTGTGGCAATAGCAAA+AGG | + | chr4.4:19367711-19367730 | None:intergenic | 45.0% | |
TCATCAAACCTTGTCCATGC+AGG | - | chr4.4:19365960-19365979 | MS.gene35150:intron | 45.0% | |
TGATTGATTGCTGTGGATGC+AGG | - | chr4.4:19366204-19366223 | MS.gene35150:CDS | 45.0% | |
TGCTCTCAAGAGTTGAGACT+TGG | + | chr4.4:19366642-19366661 | None:intergenic | 45.0% | |
TGGCAGTTGAAAGACCTTTC+AGG | + | chr4.4:19369073-19369092 | None:intergenic | 45.0% | |
TGTATCCAGACTCACTTGGT+TGG | - | chr4.4:19365402-19365421 | MS.gene35150:intron | 45.0% | |
TGTGGGATAAACAGATCCTG+TGG | + | chr4.4:19365806-19365825 | None:intergenic | 45.0% | |
! | AACGTTTTGCAGCCCAAAAG+TGG | - | chr4.4:19368231-19368250 | MS.gene35150:intron | 45.0% |
! | AACTTGCTTGTGACCGAGTA+TGG | - | chr4.4:19365919-19365938 | MS.gene35150:intron | 45.0% |
! | AGGTTCTATGGTTTGTGTCG+AGG | - | chr4.4:19364493-19364512 | MS.gene35150:intron | 45.0% |
! | CATGATGGGAGTGCAAGATA+TGG | - | chr4.4:19367415-19367434 | MS.gene35150:intron | 45.0% |
! | GGTTCTATGGTTTGTGTCGA+GGG | - | chr4.4:19364494-19364513 | MS.gene35150:intron | 45.0% |
! | TCTAATTTGGGTTTGCCCAC+AGG | - | chr4.4:19365787-19365806 | MS.gene35150:CDS | 45.0% |
! | TGACCAGGTGCAGAATTTTC+AGG | + | chr4.4:19365991-19366010 | None:intergenic | 45.0% |
!! | GAGCAGAAAGGTACTGTACT+TGG | - | chr4.4:19368039-19368058 | MS.gene35150:intron | 45.0% |
!! | GCGTATGCATCGATTTCGTT+CGG | - | chr4.4:19367292-19367311 | MS.gene35150:CDS | 45.0% |
!! | TGAGGTATCGTCTACTTCCA+TGG | + | chr4.4:19369023-19369042 | None:intergenic | 45.0% |
!!! | ACACTGCCTTTGCTTTTTCC+TGG | + | chr4.4:19366111-19366130 | None:intergenic | 45.0% |
!!! | ATATTTGATAATTTAAATTT+GGG | + | chr4.4:19365276-19365295 | None:intergenic | 5.0% |
!!! | TATATTTGATAATTTAAATT+TGG | + | chr4.4:19365277-19365296 | None:intergenic | 5.0% |
AAGGTTAGAAGCTGGGGCAA+TGG | - | chr4.4:19366843-19366862 | MS.gene35150:intron | 50.0% | |
ACAATAGCTACACGATCGCC+AGG | + | chr4.4:19366069-19366088 | None:intergenic | 50.0% | |
ACTTCCGCGACTTAGGAAAC+AGG | - | chr4.4:19364218-19364237 | MS.gene35150:intron | 50.0% | |
AGAAGAGAGGGAAAGGGAAC+TGG | - | chr4.4:19368673-19368692 | MS.gene35150:intron | 50.0% | |
AGCGTGAAGAAGAGAGGGAA+AGG | - | chr4.4:19368666-19368685 | MS.gene35150:intron | 50.0% | |
AGGAACTTCCTGCATGGACA+AGG | + | chr4.4:19365971-19365990 | None:intergenic | 50.0% | |
AGGGCTGACGGTGAAAATGA+TGG | - | chr4.4:19368707-19368726 | MS.gene35150:intron | 50.0% | |
AGGTCTTCAGGGCTGTAGAT+TGG | + | chr4.4:19366281-19366300 | None:intergenic | 50.0% | |
AGGTTCTCTCGTAAGGCCAA+AGG | - | chr4.4:19365696-19365715 | MS.gene35150:intron | 50.0% | |
AGTGAGACCAACAGCAGGTT+GGG | + | chr4.4:19369050-19369069 | None:intergenic | 50.0% | |
CAGGCTTGCAAGAATCAACG+AGG | + | chr4.4:19366050-19366069 | None:intergenic | 50.0% | |
CGAACCTGTTTCCTAAGTCG+CGG | + | chr4.4:19364225-19364244 | None:intergenic | 50.0% | |
CGATTTCGTTCGGCCATTGA+TGG | - | chr4.4:19367302-19367321 | MS.gene35150:CDS | 50.0% | |
CTCTCTCTCTCTCTCTCTCA+AGG | - | chr4.4:19369418-19369437 | MS.gene35150:CDS | 50.0% | |
GAAAATGATGGTCCTGACCG+TGG | - | chr4.4:19368719-19368738 | MS.gene35150:intron | 50.0% | |
GAAGGGGAACAAGTTCTCGT+TGG | - | chr4.4:19364410-19364429 | MS.gene35150:CDS | 50.0% | |
GCAATGGTTCTTGCTGACAG+AGG | - | chr4.4:19366859-19366878 | MS.gene35150:intron | 50.0% | |
GCAGGACGTGCTCTGATATT+TGG | + | chr4.4:19367274-19367293 | None:intergenic | 50.0% | |
GCCATATCAACTACTGGTCG+GGG | - | chr4.4:19366683-19366702 | MS.gene35150:CDS | 50.0% | |
GCGTGAAGAAGAGAGGGAAA+GGG | - | chr4.4:19368667-19368686 | MS.gene35150:intron | 50.0% | |
GGATGAGCGTGAAGAAGAGA+GGG | - | chr4.4:19368661-19368680 | MS.gene35150:intron | 50.0% | |
GGCGATCGTGTAGCTATTGT+TGG | - | chr4.4:19366069-19366088 | MS.gene35150:CDS | 50.0% | |
GTAATATCACCTCGTCGGTC+AGG | + | chr4.4:19367597-19367616 | None:intergenic | 50.0% | |
GTGATTGTGTTCAGCACTCG+TGG | - | chr4.4:19368537-19368556 | MS.gene35150:intron | 50.0% | |
TAATGCTCGTTGCAGTGTGG+TGG | - | chr4.4:19366996-19367015 | MS.gene35150:CDS | 50.0% | |
TGGATGAGCGTGAAGAAGAG+AGG | - | chr4.4:19368660-19368679 | MS.gene35150:intron | 50.0% | |
TGTGAAGTTGCTGGGATGTG+CGG | - | chr4.4:19364981-19365000 | MS.gene35150:CDS | 50.0% | |
TTCCTAAGTCGCGGAAGTTG+TGG | + | chr4.4:19364216-19364235 | None:intergenic | 50.0% | |
TTTCGTTCGGCCATTGATGG+AGG | - | chr4.4:19367305-19367324 | MS.gene35150:CDS | 50.0% | |
! | ACCCCGACCAGTAGTTGATA+TGG | + | chr4.4:19366687-19366706 | None:intergenic | 50.0% |
! | CTGTTGGTCTCACTCCTGAA+AGG | - | chr4.4:19369056-19369075 | MS.gene35150:intron | 50.0% |
!! | CTCGTTGATTCTTGCAAGCC+TGG | - | chr4.4:19366048-19366067 | MS.gene35150:CDS | 50.0% |
ACTACTGGTCGGGGTTCTTC+TGG | - | chr4.4:19366692-19366711 | MS.gene35150:CDS | 55.0% | |
ACTGTTCTTGGGAGCTGACC+AGG | + | chr4.4:19366006-19366025 | None:intergenic | 55.0% | |
AGAGGGAAAGGGAACTGGAG+AGG | - | chr4.4:19368678-19368697 | MS.gene35150:intron | 55.0% | |
ATCGCGGCTTGTGAAGCTTC+CGG | + | chr4.4:19365752-19365771 | None:intergenic | 55.0% | |
CTACTGGTCGGGGTTCTTCT+GGG | - | chr4.4:19366693-19366712 | MS.gene35150:CDS | 55.0% | |
CTCCACAACTTCCGCGACTT+AGG | - | chr4.4:19364211-19364230 | MS.gene35150:intron | 55.0% | |
CTTGTGAAGCTTCCGGTGGT+GGG | + | chr4.4:19365745-19365764 | None:intergenic | 55.0% | |
GAAGATCCCTCGGCGTAACT+CGG | + | chr4.4:19364460-19364479 | None:intergenic | 55.0% | |
GAGTGAGACCAACAGCAGGT+TGG | + | chr4.4:19369051-19369070 | None:intergenic | 55.0% | |
GCAATCTGCTCAGATGCCTG+TGG | + | chr4.4:19367810-19367829 | None:intergenic | 55.0% | |
GCATATGCGCTCCAACCGTT+TGG | - | chr4.4:19369211-19369230 | MS.gene35150:CDS | 55.0% | |
GCGGTTACCGAAGTTGTTCG+TGG | - | chr4.4:19364365-19364384 | MS.gene35150:CDS | 55.0% | |
GTCGCGGAAGTTGTGGAGAT+CGG | + | chr4.4:19364209-19364228 | None:intergenic | 55.0% | |
GTGAAGTTGCTGGGATGTGC+GGG | - | chr4.4:19364982-19365001 | MS.gene35150:CDS | 55.0% | |
GTTCATTTCTGCCCCACCAC+CGG | - | chr4.4:19365730-19365749 | MS.gene35150:intron | 55.0% | |
TACTGGTCGGGGTTCTTCTG+GGG | - | chr4.4:19366694-19366713 | MS.gene35150:CDS | 55.0% | |
TCAGAAGCCCAACCTGCTGT+TGG | - | chr4.4:19369040-19369059 | MS.gene35150:intron | 55.0% | |
TCAGGAGTGAGACCAACAGC+AGG | + | chr4.4:19369055-19369074 | None:intergenic | 55.0% | |
TGGTCAGCTCCCAAGAACAG+TGG | - | chr4.4:19366005-19366024 | MS.gene35150:intron | 55.0% | |
TTGTGAAGCTTCCGGTGGTG+GGG | + | chr4.4:19365744-19365763 | None:intergenic | 55.0% | |
! | AACAGCAGGTTGGGCTTCTG+AGG | + | chr4.4:19369041-19369060 | None:intergenic | 55.0% |
! | GGAACTGGAGAGGAAGCGTA+GGG | - | chr4.4:19368688-19368707 | MS.gene35150:intron | 55.0% |
ATCACCTCGTCGGTCAGGTC+AGG | + | chr4.4:19367592-19367611 | None:intergenic | 60.0% | |
CAGGTGAGGCGGCACATGAT+GGG | - | chr4.4:19367401-19367420 | MS.gene35150:CDS | 60.0% | |
CCAGTCTGCACAAAGCCAGC+AGG | + | chr4.4:19367944-19367963 | None:intergenic | 60.0% | |
CCTGAGCTCAGCGTATGCTG+CGG | + | chr4.4:19367832-19367851 | None:intergenic | 60.0% | |
CGATTAAGCGGCGGCGTTTG+TGG | + | chr4.4:19364177-19364196 | None:intergenic | 60.0% | |
GCTTGTGAAGCTTCCGGTGG+TGG | + | chr4.4:19365746-19365765 | None:intergenic | 60.0% | |
TCAACCTGACCTGACCGACG+AGG | - | chr4.4:19367585-19367604 | MS.gene35150:CDS | 60.0% | |
TTCTCGCCGAGTTACGCCGA+GGG | - | chr4.4:19364451-19364470 | MS.gene35150:intron | 60.0% | |
TTTCTCGCCGAGTTACGCCG+AGG | - | chr4.4:19364450-19364469 | MS.gene35150:CDS | 60.0% | |
! | GAGAGGAAGCGTAGGGCTGA+CGG | - | chr4.4:19368695-19368714 | MS.gene35150:intron | 60.0% |
! | GGGAACTGGAGAGGAAGCGT+AGG | - | chr4.4:19368687-19368706 | MS.gene35150:intron | 60.0% |
!! | CCTGCTGGCTTTGTGCAGAC+TGG | - | chr4.4:19367941-19367960 | MS.gene35150:intron | 60.0% |
!! | GCTGGCTTTGTGCAGACTGG+AGG | - | chr4.4:19367944-19367963 | MS.gene35150:intron | 60.0% |
CCGCAGCATACGCTGAGCTC+AGG | - | chr4.4:19367829-19367848 | MS.gene35150:CDS | 65.0% | |
GCAGGTGAGGCGGCACATGA+TGG | - | chr4.4:19367400-19367419 | MS.gene35150:CDS | 65.0% | |
GCGGCTTGTGAAGCTTCCGG+TGG | + | chr4.4:19365749-19365768 | None:intergenic | 65.0% | |
!! | GGTCGGGGTTCTTCTGGGGT+TGG | - | chr4.4:19366698-19366717 | MS.gene35150:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 19363979 | 19369671 | 19363979 | ID=MS.gene35150 |
chr4.4 | mRNA | 19363979 | 19369671 | 19363979 | ID=MS.gene35150.t1;Parent=MS.gene35150 |
chr4.4 | exon | 19369606 | 19369671 | 19369606 | ID=MS.gene35150.t1.exon1;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19369606 | 19369671 | 19369606 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19369411 | 19369520 | 19369411 | ID=MS.gene35150.t1.exon2;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19369411 | 19369520 | 19369411 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19369120 | 19369328 | 19369120 | ID=MS.gene35150.t1.exon3;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19369120 | 19369328 | 19369120 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19367822 | 19367952 | 19367822 | ID=MS.gene35150.t1.exon4;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19367822 | 19367952 | 19367822 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19367505 | 19367743 | 19367505 | ID=MS.gene35150.t1.exon5;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19367505 | 19367743 | 19367505 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19367188 | 19367424 | 19367188 | ID=MS.gene35150.t1.exon6;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19367188 | 19367424 | 19367188 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19366895 | 19367049 | 19366895 | ID=MS.gene35150.t1.exon7;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19366895 | 19367049 | 19366895 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19366606 | 19366814 | 19366606 | ID=MS.gene35150.t1.exon8;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19366606 | 19366814 | 19366606 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19366324 | 19366489 | 19366324 | ID=MS.gene35150.t1.exon9;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19366324 | 19366489 | 19366324 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19366044 | 19366246 | 19366044 | ID=MS.gene35150.t1.exon10;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19366044 | 19366246 | 19366044 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19365778 | 19365837 | 19365778 | ID=MS.gene35150.t1.exon11;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19365778 | 19365837 | 19365778 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19365602 | 19365691 | 19365602 | ID=MS.gene35150.t1.exon12;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19365602 | 19365691 | 19365602 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19364891 | 19365063 | 19364891 | ID=MS.gene35150.t1.exon13;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19364891 | 19365063 | 19364891 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19364573 | 19364644 | 19364573 | ID=MS.gene35150.t1.exon14;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19364573 | 19364644 | 19364573 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19364328 | 19364469 | 19364328 | ID=MS.gene35150.t1.exon15;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19364328 | 19364469 | 19364328 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
chr4.4 | exon | 19363979 | 19364038 | 19363979 | ID=MS.gene35150.t1.exon16;Parent=MS.gene35150.t1 |
chr4.4 | CDS | 19363979 | 19364038 | 19363979 | ID=cds.MS.gene35150.t1;Parent=MS.gene35150.t1 |
Gene Sequence |
Protein sequence |