AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007834.t1 MTR_0034s0060 99.401 668 4 0 1 668 131 798 0.0 1386
MS.gene007834.t1 MTR_2g073240 89.671 668 68 1 1 667 13 680 0.0 1268
MS.gene007834.t1 MTR_1g009600 73.835 665 161 3 4 667 2 654 0.0 1036
MS.gene007834.t1 MTR_4g102550 83.509 285 47 0 383 667 11 295 4.79e-178 508
MS.gene007834.t1 MTR_3g452330 51.381 181 36 1 85 265 1 129 2.62e-48 170
MS.gene007834.t1 MTR_3g452330 60.000 100 40 0 375 474 138 237 8.25e-34 130
MS.gene007834.t1 MTR_8g089180 26.000 350 218 13 8 327 72 410 5.04e-25 108
MS.gene007834.t1 MTR_8g089180 26.000 350 218 13 8 327 72 410 5.04e-25 108
MS.gene007834.t1 MTR_4g063600 27.974 311 201 10 9 312 34 328 5.28e-25 107
MS.gene007834.t1 MTR_2g096660 29.618 314 192 10 9 312 40 334 5.34e-25 107
MS.gene007834.t1 MTR_4g120030 26.979 341 216 12 1 332 105 421 8.01e-25 108
MS.gene007834.t1 MTR_4g063600 27.653 311 199 11 9 312 34 325 2.07e-24 105
MS.gene007834.t1 MTR_2g032100 25.788 349 220 12 8 327 72 410 5.21e-24 105
MS.gene007834.t1 MTR_1g088480 27.653 311 196 12 9 312 120 408 3.43e-23 103
MS.gene007834.t1 MTR_4g129820 28.190 337 207 10 8 319 96 422 1.60e-22 101
MS.gene007834.t1 MTR_4g024600 27.545 334 213 8 8 319 102 428 1.80e-21 98.2
MS.gene007834.t1 MTR_5g009170 27.066 351 215 14 7 327 47 386 3.73e-20 93.6
MS.gene007834.t1 MTR_0354s0040 27.405 343 217 9 2 319 74 409 1.45e-19 92.0
MS.gene007834.t1 MTR_8g099535 27.557 352 214 13 7 328 4 344 2.30e-19 90.5
MS.gene007834.t1 MTR_4g102270 26.724 348 208 10 3 319 89 420 6.64e-19 90.1
MS.gene007834.t1 MTR_5g011940 26.136 352 225 10 3 326 86 430 9.10e-19 89.7
MS.gene007834.t1 MTR_3g084090 26.866 335 216 10 9 321 101 428 1.91e-18 89.0
MS.gene007834.t1 MTR_2g032100 28.272 191 124 5 8 193 72 254 1.57e-16 81.3
MS.gene007834.t1 MTR_4g134490 23.429 350 229 13 7 327 25 364 2.14e-16 82.0
MS.gene007834.t1 MTR_4g134490 23.315 356 228 14 7 327 25 370 1.06e-14 76.6
MS.gene007834.t1 MTR_3g105440 30.242 248 142 10 1 234 1 231 2.07e-14 77.0
MS.gene007834.t1 MTR_3g105440 29.388 245 148 9 1 234 1 231 2.07e-14 77.0
MS.gene007834.t1 MTR_7g108490 27.083 192 124 6 141 322 131 316 9.26e-12 67.0
MS.gene007834.t1 MTR_7g108490 27.083 192 124 6 141 322 132 317 9.52e-12 67.0
MS.gene007834.t1 MTR_5g009160 27.473 273 163 12 81 327 17 280 3.11e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007834.t1 AT1G78570 88.209 670 74 2 1 667 1 668 0.0 1243
MS.gene007834.t1 AT3G14790 85.757 667 91 2 1 667 4 666 0.0 1169
MS.gene007834.t1 AT3G14790 85.757 667 91 2 1 667 1 663 0.0 1168
MS.gene007834.t1 AT1G53500 84.535 666 100 2 2 667 4 666 0.0 1160
MS.gene007834.t1 AT1G63000 81.690 284 52 0 384 667 13 296 6.81e-178 508
MS.gene007834.t1 AT4G20460 27.401 354 208 13 8 327 71 409 3.81e-28 117
MS.gene007834.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene007834.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene007834.t1 AT2G28760 29.073 313 195 10 9 312 33 327 2.98e-26 110
MS.gene007834.t1 AT2G28760 29.073 313 195 10 9 312 64 358 6.02e-26 110
MS.gene007834.t1 AT5G59290 28.754 313 196 10 9 312 3 297 8.88e-26 108
MS.gene007834.t1 AT5G59290 28.754 313 196 10 9 312 32 326 1.16e-25 109
MS.gene007834.t1 AT5G59290 28.754 313 196 10 9 312 25 319 1.35e-25 108
MS.gene007834.t1 AT3G62830 27.796 313 198 10 9 312 121 414 1.39e-25 110
MS.gene007834.t1 AT3G62830 27.796 313 198 10 9 312 121 414 1.39e-25 110
MS.gene007834.t1 AT5G59290 28.754 313 196 10 9 312 47 341 1.56e-25 108
MS.gene007834.t1 AT3G46440 28.435 313 197 10 9 312 31 325 3.87e-25 107
MS.gene007834.t1 AT3G46440 28.435 313 197 10 9 312 31 325 3.87e-25 107
MS.gene007834.t1 AT3G53520 27.302 315 205 10 9 316 122 419 6.41e-25 108
MS.gene007834.t1 AT2G47650 27.157 313 200 10 9 312 123 416 3.26e-24 106
MS.gene007834.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene007834.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene007834.t1 AT5G44480 26.934 349 214 14 8 326 72 409 8.41e-24 105
MS.gene007834.t1 AT5G44480 26.934 349 214 14 8 326 96 433 1.01e-23 105
MS.gene007834.t1 AT1G30620 27.714 350 212 14 8 327 71 409 2.34e-23 103
MS.gene007834.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene007834.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene007834.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene007834.t1 AT1G30620 27.714 350 212 14 8 327 72 410 2.72e-23 103
MS.gene007834.t1 AT2G47650 26.814 317 202 10 9 312 123 422 4.06e-23 103
MS.gene007834.t1 AT3G53520 26.984 315 204 11 9 316 122 417 1.38e-22 101
MS.gene007834.t1 AT3G53520 26.331 338 202 11 9 316 122 442 1.54e-22 101
MS.gene007834.t1 AT2G45310 27.628 333 212 9 9 319 99 424 2.24e-21 97.8
MS.gene007834.t1 AT1G63180 26.611 357 221 13 1 327 1 346 8.88e-21 94.7
MS.gene007834.t1 AT4G00110 27.246 334 214 8 8 319 92 418 1.88e-20 95.1
MS.gene007834.t1 AT1G02000 26.647 334 216 9 8 319 93 419 1.09e-19 92.8
MS.gene007834.t1 AT1G30620 30.366 191 120 5 8 193 72 254 1.36e-18 87.4
MS.gene007834.t1 AT4G30440 30.043 233 153 5 8 234 89 317 3.37e-18 88.2
MS.gene007834.t1 AT3G53520 27.897 233 148 7 8 234 121 339 1.79e-17 85.1
MS.gene007834.t1 AT3G23820 26.048 334 218 9 8 319 113 439 2.53e-16 82.4
MS.gene007834.t1 AT1G64440 27.066 351 213 15 8 327 4 342 4.71e-16 80.5
MS.gene007834.t1 AT4G12250 26.048 334 218 8 8 319 97 423 3.49e-15 79.0
MS.gene007834.t1 AT1G63180 27.365 296 169 12 1 262 1 284 3.62e-15 77.4
MS.gene007834.t1 AT4G23920 25.291 344 222 12 7 323 3 338 1.57e-14 75.9
MS.gene007834.t1 AT1G47290 29.918 244 140 11 5 234 8 234 2.96e-13 72.4
MS.gene007834.t1 AT1G47290 29.918 244 140 11 5 234 8 234 8.36e-13 71.6
MS.gene007834.t1 AT2G26260 26.104 249 149 8 2 234 5 234 1.00e-12 71.6
MS.gene007834.t1 AT1G73250 26.923 182 121 5 151 322 140 319 5.41e-12 68.2

Find 173 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAATTCTTTCTTTAATT+TGG 0.120604 8.1:+53594119 None:intergenic
ACACGTGGAAACAATGTTTA+TGG 0.186415 8.1:-53595580 MS.gene007834:CDS
TCTTTGATGGAAAGCAATTC+TGG 0.218557 8.1:+53594099 None:intergenic
ATAGAAAGATCCCATGAAAT+TGG 0.250976 8.1:+53594607 None:intergenic
AAACCAATGCCGGAGCCTTC+TGG 0.251282 8.1:+53594647 None:intergenic
CTGCGGAGTGGCAGTGTTCT+TGG 0.257055 8.1:+53595012 None:intergenic
TCTGTTTATTTCTTCTTGTT+TGG 0.260972 8.1:+53594051 None:intergenic
TTAGAAGCCTGCAAGGTTAC+TGG 0.269609 8.1:-53595787 MS.gene007834:CDS
CTTGATAAGTGATTCTTTGA+TGG 0.279707 8.1:+53594086 None:intergenic
GAAATTCTGCCACTTGAAAC+TGG 0.290497 8.1:+53594203 None:intergenic
TTTGCCATCTCGATTGAAAT+AGG 0.290998 8.1:+53594315 None:intergenic
AGGGTGGATTGGAGGTTTGC+TGG 0.296271 8.1:-53594954 MS.gene007834:CDS
AACTTCTCGGGAAACTGATT+TGG 0.320333 8.1:+53595556 None:intergenic
TTTCCACGTGTTGTGATAAC+AGG 0.321129 8.1:+53595592 None:intergenic
ACTTACCATAGCTTTAGTTT+TGG 0.328658 8.1:+53594583 None:intergenic
ACAAATTTAATGTTAGCTTC+TGG 0.336048 8.1:+53595313 None:intergenic
CCGAAGAATATCCTCATTAC+TGG 0.336591 8.1:-53596114 MS.gene007834:CDS
GATTCCAAAGTTCATCCTTT+TGG 0.336822 8.1:-53595533 MS.gene007834:CDS
GTTGGCCATGTTTACAATAT+CGG 0.337863 8.1:-53595400 MS.gene007834:CDS
CGACCCTTTGCGTATTCATA+TGG 0.339196 8.1:+53594905 None:intergenic
ATGAGATCCTTGAGATGTAT+AGG 0.343554 8.1:-53594239 MS.gene007834:CDS
TCCAATACTGTCATGCTGTT+TGG 0.344679 8.1:+53594348 None:intergenic
TTCTTGCTGTTTGGTAGGAC+AGG 0.352546 8.1:-53594974 MS.gene007834:CDS
GATCTGGCCAGTAACCTTGC+AGG 0.353065 8.1:+53595780 None:intergenic
GTCAGTACTGATGAGGTCTA+TGG 0.353770 8.1:-53595742 MS.gene007834:CDS
CCAATCAACATTGGGTCTTC+CGG 0.367734 8.1:+53594805 None:intergenic
CCTTTGAAGTTCTTGCTGTT+TGG 0.369703 8.1:-53594983 MS.gene007834:CDS
TGTCAACTACTTGCTTATTA+CGG 0.386916 8.1:-53595917 MS.gene007834:CDS
ATCCTCATTACTGGGGCAGC+TGG 0.388115 8.1:-53596105 MS.gene007834:CDS
GGTAGGACAGGGTGGATTGG+AGG 0.391913 8.1:-53594962 MS.gene007834:CDS
AGAGAAACTTGAGTGGAATC+TGG 0.393435 8.1:-53594293 MS.gene007834:CDS
GTGGCAGTGTTCTTGGTTGA+TGG 0.400754 8.1:+53595019 None:intergenic
GGAAAGACTCTTCCGATTCA+TGG 0.405661 8.1:-53595502 MS.gene007834:CDS
CTTTGATGGAAAGCAATTCT+GGG 0.407319 8.1:+53594100 None:intergenic
GGAAGACAAGCCCAATTTCA+TGG 0.408529 8.1:-53594618 MS.gene007834:CDS
CCCCTTGACAAACTTAAAGT+TGG 0.415072 8.1:+53595960 None:intergenic
ACCATCCGCGCTAATGTTGC+TGG 0.416077 8.1:-53594761 MS.gene007834:CDS
AGTTCCGTATATGTTGTTCT+TGG 0.417317 8.1:+53595819 None:intergenic
ATGACAATGTATGCACCCTT+AGG 0.418171 8.1:-53594455 MS.gene007834:CDS
AGGCTCCGGCATTGGTTTCA+AGG 0.423913 8.1:-53594642 MS.gene007834:CDS
TGTTGCAGAGTACGGGTTTG+TGG 0.424954 8.1:+53595666 None:intergenic
TTCACCAAGAACAACATATA+CGG 0.425841 8.1:-53595823 MS.gene007834:CDS
ACTCATGTCGACAACTCATT+TGG 0.427673 8.1:-53595859 MS.gene007834:CDS
TTTGGTAGGACAGGGTGGAT+TGG 0.439952 8.1:-53594965 MS.gene007834:CDS
TTGGCCATGTTTACAATATC+GGG 0.445880 8.1:-53595399 MS.gene007834:CDS
AACTTTGGAATCAACTTCTC+GGG 0.447682 8.1:+53595544 None:intergenic
TGAGATCCTTGAGATGTATA+GGG 0.450832 8.1:-53594238 MS.gene007834:CDS
GAACTTTGGAATCAACTTCT+CGG 0.452334 8.1:+53595543 None:intergenic
TAGAAAGATCCCATGAAATT+GGG 0.452975 8.1:+53594608 None:intergenic
CCCTTGACAAACTTAAAGTT+GGG 0.453571 8.1:+53595961 None:intergenic
TTGCATCTCATGTTGCCAAC+CGG 0.455327 8.1:-53596077 MS.gene007834:CDS
CACGTGGAAACAATGTTTAT+GGG 0.456078 8.1:-53595579 MS.gene007834:CDS
ACCGATGAAGATGCTATTGT+TGG 0.459550 8.1:-53595715 MS.gene007834:CDS
CGAAGAATATCCTCATTACT+GGG 0.460488 8.1:-53596113 MS.gene007834:CDS
GAAATGCTTGTCATGGCATA+TGG 0.461925 8.1:-53595631 MS.gene007834:CDS
CATCCAGAAGGCTCCGGCAT+TGG 0.462462 8.1:-53594650 MS.gene007834:CDS
AAGTATCTCTGGTCATTAAA+CGG 0.464062 8.1:+53595280 None:intergenic
TCATTGTGGCTCACAGCACC+AGG 0.470389 8.1:+53594258 None:intergenic
GAAAGACTCTTCCGATTCAT+GGG 0.472425 8.1:-53595501 MS.gene007834:CDS
CCGGAAGACCCAATGTTGAT+TGG 0.478270 8.1:-53594805 MS.gene007834:CDS
ATGGCATATGGTAGGTCATA+CGG 0.483908 8.1:-53595619 MS.gene007834:CDS
GGGTGGATTGGAGGTTTGCT+GGG 0.485086 8.1:-53594953 MS.gene007834:CDS
TGGCAGTGTTCTTGGTTGAT+GGG 0.488497 8.1:+53595020 None:intergenic
CATGAATGAACCTTCTGATC+TGG 0.488900 8.1:+53595764 None:intergenic
GTTGCAGAGTACGGGTTTGT+GGG 0.489248 8.1:+53595667 None:intergenic
TTGCTCAGATCAGATGAAAT+CGG 0.490308 8.1:+53594423 None:intergenic
TGTTGCTGGCACTTTAACAT+TGG 0.496616 8.1:-53594747 MS.gene007834:CDS
GATCATCGAGAAAGTATCTC+TGG 0.496831 8.1:+53595269 None:intergenic
TTAGATGAATTGACTGATGC+GGG 0.498621 8.1:+53595058 None:intergenic
TTGATGATAAATTATGCTAC+TGG 0.499263 8.1:-53594698 MS.gene007834:CDS
TGAAGTTCTTGCTGTTTGGT+AGG 0.503504 8.1:-53594979 MS.gene007834:CDS
AAATTCTGCCACTTGAAACT+GGG 0.504329 8.1:+53594204 None:intergenic
TGGGAGATGATTTCGAAGGA+AGG 0.504770 8.1:+53595980 None:intergenic
GCCAGCAACATTAGCGCGGA+TGG 0.505695 8.1:+53594760 None:intergenic
GAAAAGCCTGCATATATCCT+TGG 0.507143 8.1:+53595345 None:intergenic
TCTTTCCTTGCATAGCCAAA+AGG 0.507278 8.1:+53595518 None:intergenic
GTTGATGATGCCTGGTGGAA+TGG 0.508097 8.1:-53595113 MS.gene007834:CDS
TCAGTACTGATGAGGTCTAT+GGG 0.508268 8.1:-53595741 MS.gene007834:CDS
TGACAATGTATGCACCCTTA+GGG 0.510852 8.1:-53594454 MS.gene007834:CDS
CCCAACTTTAAGTTTGTCAA+GGG 0.511512 8.1:-53595961 MS.gene007834:CDS
TCCAAACAGCATGACAGTAT+TGG 0.513133 8.1:-53594349 MS.gene007834:CDS
GTTTCGCACCAATCAACATT+GGG 0.513420 8.1:+53594797 None:intergenic
CTATTCCAAAACTAAAGCTA+TGG 0.514463 8.1:-53594588 MS.gene007834:intron
ATAGCCAAAAGGATGAACTT+TGG 0.521511 8.1:+53595529 None:intergenic
GTTCTTCACAAGGGAGAGGT+TGG 0.523496 8.1:-53595418 MS.gene007834:CDS
GAGAGGACCACATGGGATGA+AGG 0.523892 8.1:-53595220 MS.gene007834:CDS
TTTAATGCTGCAGGTGTCAC+CGG 0.525836 8.1:-53594824 MS.gene007834:CDS
CCAGTAATGAGGATATTCTT+CGG 0.534894 8.1:+53596114 None:intergenic
TGCTGTTTGGTAGGACAGGG+TGG 0.535213 8.1:-53594970 MS.gene007834:CDS
TGGCATATGGTAGGTCATAC+GGG 0.535706 8.1:-53595618 MS.gene007834:CDS
TTAGAACCATCCCCATGAAT+CGG 0.536407 8.1:+53595490 None:intergenic
CCGAGGATGTTGATGATGCC+TGG 0.537047 8.1:-53595121 MS.gene007834:CDS
TCCCAACTTTAAGTTTGTCA+AGG 0.538100 8.1:-53595962 MS.gene007834:CDS
ATCATCAACATCCTCGGATG+AGG 0.538319 8.1:+53595127 None:intergenic
CCAAACAGCAAGAACTTCAA+AGG 0.539699 8.1:+53594983 None:intergenic
CCGTACTCTGCAACAAAAGC+AGG 0.539993 8.1:-53595658 MS.gene007834:CDS
GCAGCACATCCAGAAGGCTC+CGG 0.540124 8.1:-53594656 MS.gene007834:CDS
TTCCTCCTTGAAACCAATGC+CGG 0.540843 8.1:+53594637 None:intergenic
ATCCAGCTGCCCCAGTAATG+AGG 0.547690 8.1:+53596103 None:intergenic
TCTTGCTGTTTGGTAGGACA+GGG 0.548224 8.1:-53594973 MS.gene007834:CDS
AGTTTCGCACCAATCAACAT+TGG 0.552063 8.1:+53594796 None:intergenic
TGTAATCCCTATACATCTCA+AGG 0.552164 8.1:+53594232 None:intergenic
CAATTCATCTAATACTCGTA+TGG 0.556213 8.1:-53595047 MS.gene007834:CDS
GACTGAAGAAAACCATAGAA+TGG 0.557484 8.1:-53595198 MS.gene007834:CDS
CGGGATGGCTTCGGACAAGC+CGG 0.558368 8.1:+53596058 None:intergenic
TTGTCCCGATATTGTAAACA+TGG 0.558984 8.1:+53595395 None:intergenic
AAATCGGCATACGAACCCTA+AGG 0.561199 8.1:+53594439 None:intergenic
GAAGACAAGCCCAATTTCAT+GGG 0.561539 8.1:-53594617 MS.gene007834:CDS
AGGTTACTGGCCAGATCAGA+AGG 0.563011 8.1:-53595774 MS.gene007834:CDS
TATCGGGACAAAGAAGGAAA+GGG 0.566922 8.1:-53595383 MS.gene007834:CDS
TTACAATATCGGGACAAAGA+AGG 0.567443 8.1:-53595389 MS.gene007834:CDS
TCTACCTATTTCAATCGAGA+TGG 0.567753 8.1:-53594319 MS.gene007834:CDS
ATCTGGAACTTCACTAACCC+TGG 0.570382 8.1:-53594276 MS.gene007834:CDS
AGTTGTTCTTCACAAGGGAG+AGG 0.570906 8.1:-53595422 MS.gene007834:CDS
CTTCAGTCCTTCATCCCATG+TGG 0.572232 8.1:+53595213 None:intergenic
CTCTGCAACAAAAGCAGGAG+CGG 0.574561 8.1:-53595653 MS.gene007834:CDS
CACTCTTGAAGAGCAAGCCA+AGG 0.577008 8.1:-53594181 MS.gene007834:CDS
TCGAGCAGCGACAATCACCT+TGG 0.579593 8.1:+53594164 None:intergenic
ATATCGGGACAAAGAAGGAA+AGG 0.579866 8.1:-53595384 MS.gene007834:CDS
ATGTAGCCAAGGATATATGC+AGG 0.580206 8.1:-53595351 MS.gene007834:CDS
TCCAACAATAGCATCTTCAT+CGG 0.581847 8.1:+53595714 None:intergenic
ATTCCATATGAATACGCAAA+GGG 0.581999 8.1:-53594908 MS.gene007834:CDS
ACTCTTCCGATTCATGGGGA+TGG 0.582904 8.1:-53595496 MS.gene007834:CDS
CCAGGCATCATCAACATCCT+CGG 0.585840 8.1:+53595121 None:intergenic
GAAGAAGTTGAGAAGCCTCA+TGG 0.594333 8.1:+53595689 None:intergenic
CAAAGGATGTTTCTGCGGAG+TGG 0.596102 8.1:+53595000 None:intergenic
AACTTCAAAGGATGTTTCTG+CGG 0.601532 8.1:+53594995 None:intergenic
ATTAGATGAATTGACTGATG+CGG 0.603499 8.1:+53595057 None:intergenic
AAAACCTTGGTTGGGCTGAG+AGG 0.605508 8.1:-53595237 MS.gene007834:CDS
CAACTTTAAGTTTGTCAAGG+GGG 0.608121 8.1:-53595959 MS.gene007834:CDS
TGCTTGTCATGGCATATGGT+AGG 0.608244 8.1:-53595627 MS.gene007834:CDS
TGCTCGAAGCAACAATGAGA+TGG 0.612444 8.1:-53594148 MS.gene007834:CDS
TGTCTTATTAGAAGCCTGCA+AGG 0.613132 8.1:-53595794 MS.gene007834:CDS
GCTGATGTGTGCAGAGAGCA+CGG 0.615024 8.1:-53594725 MS.gene007834:CDS
ATTTGAAGTTGTTCTTCACA+AGG 0.615527 8.1:-53595428 MS.gene007834:CDS
AAATGTCTCTCCATTCCACC+AGG 0.615800 8.1:+53595103 None:intergenic
AGGAGCGGAAATGCTTGTCA+TGG 0.617019 8.1:-53595638 MS.gene007834:CDS
GTTGGGCTGAGAGGACCACA+TGG 0.617696 8.1:-53595228 MS.gene007834:CDS
GGGAGTTATCGATGTAGCCA+AGG 0.619015 8.1:-53595362 MS.gene007834:CDS
GGTGGATTGGAGGTTTGCTG+GGG 0.620082 8.1:-53594952 MS.gene007834:CDS
TACGATGCAGCACATCCAGA+AGG 0.620237 8.1:-53594662 MS.gene007834:CDS
GGGAAATTGTGTGAAAAGCA+AGG 0.621950 8.1:-53594932 MS.gene007834:CDS
GTGCATTGCTTCCTCATCCG+AGG 0.623034 8.1:-53595138 MS.gene007834:CDS
ACATTGACCCCAGTTTCAAG+TGG 0.625778 8.1:-53594212 MS.gene007834:CDS
ATGGCTTCGGACAAGCCGGT+TGG 0.627965 8.1:+53596062 None:intergenic
TTCATCTAATACTCGTATGG+TGG 0.628057 8.1:-53595044 MS.gene007834:CDS
CATTCATGTCAGTACTGATG+AGG 0.629890 8.1:-53595749 MS.gene007834:CDS
ATGGCAAAGAGAAACTTGAG+TGG 0.635436 8.1:-53594300 MS.gene007834:CDS
ATCTTTGTGATGAAGTTGCG+TGG 0.638823 8.1:+53594399 None:intergenic
AATCGGCATACGAACCCTAA+GGG 0.640550 8.1:+53594440 None:intergenic
CCAACTTTAAGTTTGTCAAG+GGG 0.643202 8.1:-53595960 MS.gene007834:CDS
TTTGAAGTTGTTCTTCACAA+GGG 0.643778 8.1:-53595427 MS.gene007834:CDS
TGGTCCTCTCAGCCCAACCA+AGG 0.644418 8.1:+53595233 None:intergenic
ATGGGGATGGTTCTAATGTG+AGG 0.645313 8.1:-53595483 MS.gene007834:CDS
CGAAGCAACAATGAGATGGA+TGG 0.645825 8.1:-53594144 MS.gene007834:CDS
TTACCTGTTATCACAACACG+TGG 0.649186 8.1:-53595595 MS.gene007834:CDS
CTGATGTGTGCAGAGAGCAC+GGG 0.653789 8.1:-53594724 MS.gene007834:CDS
ATCGGGACAAAGAAGGAAAG+GGG 0.655672 8.1:-53595382 MS.gene007834:CDS
TCTTTGTGATGAAGTTGCGT+GGG 0.656677 8.1:+53594400 None:intergenic
AATTCTGCCACTTGAAACTG+GGG 0.659291 8.1:+53594205 None:intergenic
AATTCCATATGAATACGCAA+AGG 0.662567 8.1:-53594909 MS.gene007834:CDS
TGCTATTGTTGGAAACCATG+AGG 0.663909 8.1:-53595704 MS.gene007834:CDS
ACATCTCAAGGATCTCATTG+TGG 0.665387 8.1:+53594244 None:intergenic
CAGTACTGATGAGGTCTATG+GGG 0.678940 8.1:-53595740 MS.gene007834:CDS
AAAGACTCTTCCGATTCATG+GGG 0.688876 8.1:-53595500 MS.gene007834:CDS
AAGTTGGGAGATGATTTCGA+AGG 0.693891 8.1:+53595976 None:intergenic
CTCCGGCATTGGTTTCAAGG+AGG 0.696239 8.1:-53594639 MS.gene007834:CDS
AAGTGCCAGCAACATTAGCG+CGG 0.700659 8.1:+53594756 None:intergenic
GTATTGCGAAGATGTTGCTG+AGG 0.701661 8.1:-53595452 MS.gene007834:CDS
CATTGTGGCTCACAGCACCA+GGG 0.711227 8.1:+53594259 None:intergenic
AGGATGTTGATGATGCCTGG+TGG 0.713184 8.1:-53595118 MS.gene007834:CDS
TTGGGCTGAGAGGACCACAT+GGG 0.713326 8.1:-53595227 MS.gene007834:CDS
GAAGAATATCCTCATTACTG+GGG 0.732970 8.1:-53596112 MS.gene007834:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAGATCGTTCTATTTA+AGG + chr8.1:53595630-53595649 None:intergenic 20.0%
!! GAAAAAAATTCATAATGCAA+AGG + chr8.1:53595657-53595676 None:intergenic 20.0%
!!! CTTTTAATTGAATTTTGATC+AGG - chr8.1:53595686-53595705 MS.gene007834:CDS 20.0%
! TGGGAATTCTTTCTTTAATT+TGG + chr8.1:53596069-53596088 None:intergenic 25.0%
!! ACAAATTTAATGTTAGCTTC+TGG + chr8.1:53594875-53594894 None:intergenic 25.0%
!! TTGATGATAAATTATGCTAC+TGG - chr8.1:53595487-53595506 MS.gene007834:CDS 25.0%
!!! ATTTTTGGTATACCATTCTA+TGG + chr8.1:53595002-53595021 None:intergenic 25.0%
AAGTATCTCTGGTCATTAAA+CGG + chr8.1:53594908-53594927 None:intergenic 30.0%
AATTCCATATGAATACGCAA+AGG - chr8.1:53595276-53595295 MS.gene007834:CDS 30.0%
ATAGAAAGATCCCATGAAAT+TGG + chr8.1:53595581-53595600 None:intergenic 30.0%
ATTAGATGAATTGACTGATG+CGG + chr8.1:53595131-53595150 None:intergenic 30.0%
ATTCCATATGAATACGCAAA+GGG - chr8.1:53595277-53595296 MS.gene007834:CDS 30.0%
CAATTCATCTAATACTCGTA+TGG - chr8.1:53595138-53595157 MS.gene007834:CDS 30.0%
CTATTCCAAAACTAAAGCTA+TGG - chr8.1:53595597-53595616 MS.gene007834:CDS 30.0%
CTTGATAAGTGATTCTTTGA+TGG + chr8.1:53596102-53596121 None:intergenic 30.0%
TAGAAAGATCCCATGAAATT+GGG + chr8.1:53595580-53595599 None:intergenic 30.0%
TGTCAACTACTTGCTTATTA+CGG - chr8.1:53594268-53594287 MS.gene007834:CDS 30.0%
TTCACCAAGAACAACATATA+CGG - chr8.1:53594362-53594381 MS.gene007834:CDS 30.0%
! AAGCACAACAATTTTGTACT+CGG + chr8.1:53594150-53594169 None:intergenic 30.0%
! ATTTGAAGTTGTTCTTCACA+AGG - chr8.1:53594757-53594776 MS.gene007834:CDS 30.0%
! TTTGAAGTTGTTCTTCACAA+GGG - chr8.1:53594758-53594777 MS.gene007834:CDS 30.0%
!! ATTGAATTTTGATCAGGTTG+AGG - chr8.1:53595692-53595711 MS.gene007834:CDS 30.0%
!!! ACTTACCATAGCTTTAGTTT+TGG + chr8.1:53595605-53595624 None:intergenic 30.0%
ACACGTGGAAACAATGTTTA+TGG - chr8.1:53594605-53594624 MS.gene007834:CDS 35.0%
ACCTGCAGCATTAAAAACAT+GGG + chr8.1:53595356-53595375 None:intergenic 35.0%
AGTTCCGTATATGTTGTTCT+TGG + chr8.1:53594369-53594388 None:intergenic 35.0%
ATACCAAAAATCCTGATTGG+TGG - chr8.1:53595011-53595030 MS.gene007834:CDS 35.0%
ATAGCCAAAAGGATGAACTT+TGG + chr8.1:53594659-53594678 None:intergenic 35.0%
ATGAGATCCTTGAGATGTAT+AGG - chr8.1:53595946-53595965 MS.gene007834:CDS 35.0%
CACGTGGAAACAATGTTTAT+GGG - chr8.1:53594606-53594625 MS.gene007834:CDS 35.0%
CCAGTAATGAGGATATTCTT+CGG + chr8.1:53594074-53594093 None:intergenic 35.0%
CCCTTGACAAACTTAAAGTT+GGG + chr8.1:53594227-53594246 None:intergenic 35.0%
CGAAGAATATCCTCATTACT+GGG - chr8.1:53594072-53594091 MS.gene007834:CDS 35.0%
CTTTGATGGAAAGCAATTCT+GGG + chr8.1:53596088-53596107 None:intergenic 35.0%
GAAGAATATCCTCATTACTG+GGG - chr8.1:53594073-53594092 MS.gene007834:CDS 35.0%
GACTGAAGAAAACCATAGAA+TGG - chr8.1:53594987-53595006 MS.gene007834:CDS 35.0%
GGTATACCAAAAATCCTGAT+TGG - chr8.1:53595008-53595027 MS.gene007834:CDS 35.0%
GTTGGCCATGTTTACAATAT+CGG - chr8.1:53594785-53594804 MS.gene007834:CDS 35.0%
TACCAAAAATCCTGATTGGT+GGG - chr8.1:53595012-53595031 MS.gene007834:CDS 35.0%
TCCAACAATAGCATCTTCAT+CGG + chr8.1:53594474-53594493 None:intergenic 35.0%
TCTACCTATTTCAATCGAGA+TGG - chr8.1:53595866-53595885 MS.gene007834:CDS 35.0%
TCTTTGATGGAAAGCAATTC+TGG + chr8.1:53596089-53596108 None:intergenic 35.0%
TGAGATCCTTGAGATGTATA+GGG - chr8.1:53595947-53595966 MS.gene007834:CDS 35.0%
TGTAATCCCTATACATCTCA+AGG + chr8.1:53595956-53595975 None:intergenic 35.0%
TTACAATATCGGGACAAAGA+AGG - chr8.1:53594796-53594815 MS.gene007834:CDS 35.0%
TTAGATGAATTGACTGATGC+GGG + chr8.1:53595130-53595149 None:intergenic 35.0%
TTCATCTAATACTCGTATGG+TGG - chr8.1:53595141-53595160 MS.gene007834:CDS 35.0%
TTGCTCAGATCAGATGAAAT+CGG + chr8.1:53595765-53595784 None:intergenic 35.0%
TTGGCCATGTTTACAATATC+GGG - chr8.1:53594786-53594805 MS.gene007834:CDS 35.0%
TTGTCCCGATATTGTAAACA+TGG + chr8.1:53594793-53594812 None:intergenic 35.0%
TTTGCCATCTCGATTGAAAT+AGG + chr8.1:53595873-53595892 None:intergenic 35.0%
! AAATTCTGCCACTTGAAACT+GGG + chr8.1:53595984-53596003 None:intergenic 35.0%
! AACTTCAAAGGATGTTTCTG+CGG + chr8.1:53595193-53595212 None:intergenic 35.0%
! AGCACAACAATTTTGTACTC+GGG + chr8.1:53594149-53594168 None:intergenic 35.0%
! CAACTTTAAGTTTGTCAAGG+GGG - chr8.1:53594226-53594245 MS.gene007834:CDS 35.0%
! CCAACTTTAAGTTTGTCAAG+GGG - chr8.1:53594225-53594244 MS.gene007834:CDS 35.0%
! CCCAACTTTAAGTTTGTCAA+GGG - chr8.1:53594224-53594243 MS.gene007834:CDS 35.0%
! GATTCCAAAGTTCATCCTTT+TGG - chr8.1:53594652-53594671 MS.gene007834:CDS 35.0%
! TCCCAACTTTAAGTTTGTCA+AGG - chr8.1:53594223-53594242 MS.gene007834:CDS 35.0%
!! AACTTTGGAATCAACTTCTC+GGG + chr8.1:53594644-53594663 None:intergenic 35.0%
!! GAACTTTGGAATCAACTTCT+CGG + chr8.1:53594645-53594664 None:intergenic 35.0%
AAAGACTCTTCCGATTCATG+GGG - chr8.1:53594685-53594704 MS.gene007834:CDS 40.0%
AACTTCTCGGGAAACTGATT+TGG + chr8.1:53594632-53594651 None:intergenic 40.0%
AAGTTGGGAGATGATTTCGA+AGG + chr8.1:53594212-53594231 None:intergenic 40.0%
AAGTTTGTCAAGGGGGATAT+CGG - chr8.1:53594233-53594252 MS.gene007834:CDS 40.0%
ACATCTCAAGGATCTCATTG+TGG + chr8.1:53595944-53595963 None:intergenic 40.0%
ACCAAAAATCCTGATTGGTG+GGG - chr8.1:53595013-53595032 MS.gene007834:CDS 40.0%
ACCGATGAAGATGCTATTGT+TGG - chr8.1:53594470-53594489 MS.gene007834:CDS 40.0%
ACTCATGTCGACAACTCATT+TGG - chr8.1:53594326-53594345 MS.gene007834:CDS 40.0%
AGAAGCTGAAAAACCTTGGT+TGG - chr8.1:53594939-53594958 MS.gene007834:CDS 40.0%
AGAGAAACTTGAGTGGAATC+TGG - chr8.1:53595892-53595911 MS.gene007834:CDS 40.0%
AGTTTCGCACCAATCAACAT+TGG + chr8.1:53595392-53595411 None:intergenic 40.0%
ATATCGGGACAAAGAAGGAA+AGG - chr8.1:53594801-53594820 MS.gene007834:CDS 40.0%
ATCTTTGTGATGAAGTTGCG+TGG + chr8.1:53595789-53595808 None:intergenic 40.0%
ATGACAATGTATGCACCCTT+AGG - chr8.1:53595730-53595749 MS.gene007834:CDS 40.0%
ATGGCAAAGAGAAACTTGAG+TGG - chr8.1:53595885-53595904 MS.gene007834:CDS 40.0%
ATGGCATATGGTAGGTCATA+CGG - chr8.1:53594566-53594585 MS.gene007834:intron 40.0%
ATGTAGCCAAGGATATATGC+AGG - chr8.1:53594834-53594853 MS.gene007834:CDS 40.0%
CACCTGCAGCATTAAAAACA+TGG + chr8.1:53595357-53595376 None:intergenic 40.0%
CATGAATGAACCTTCTGATC+TGG + chr8.1:53594424-53594443 None:intergenic 40.0%
CCAAACAGCAAGAACTTCAA+AGG + chr8.1:53595205-53595224 None:intergenic 40.0%
CCCCTTGACAAACTTAAAGT+TGG + chr8.1:53594228-53594247 None:intergenic 40.0%
CCGAAGAATATCCTCATTAC+TGG - chr8.1:53594071-53594090 MS.gene007834:CDS 40.0%
GAAAAGCCTGCATATATCCT+TGG + chr8.1:53594843-53594862 None:intergenic 40.0%
GAAAGACTCTTCCGATTCAT+GGG - chr8.1:53594684-53594703 MS.gene007834:CDS 40.0%
GAAATGCTTGTCATGGCATA+TGG - chr8.1:53594554-53594573 MS.gene007834:intron 40.0%
GAAGACAAGCCCAATTTCAT+GGG - chr8.1:53595568-53595587 MS.gene007834:CDS 40.0%
GAAGCTGAAAAACCTTGGTT+GGG - chr8.1:53594940-53594959 MS.gene007834:CDS 40.0%
GATCAGAAGCTGAAAAACCT+TGG - chr8.1:53594935-53594954 MS.gene007834:CDS 40.0%
GCAGCATTAAAAACATGGGT+TGG + chr8.1:53595352-53595371 None:intergenic 40.0%
GGGAAATTGTGTGAAAAGCA+AGG - chr8.1:53595253-53595272 MS.gene007834:CDS 40.0%
GTTTCGCACCAATCAACATT+GGG + chr8.1:53595391-53595410 None:intergenic 40.0%
TATCGGGACAAAGAAGGAAA+GGG - chr8.1:53594802-53594821 MS.gene007834:CDS 40.0%
TCCAAACAGCATGACAGTAT+TGG - chr8.1:53595836-53595855 MS.gene007834:CDS 40.0%
TCCAATACTGTCATGCTGTT+TGG + chr8.1:53595840-53595859 None:intergenic 40.0%
TCTTTCCTTGCATAGCCAAA+AGG + chr8.1:53594670-53594689 None:intergenic 40.0%
TCTTTGTGATGAAGTTGCGT+GGG + chr8.1:53595788-53595807 None:intergenic 40.0%
TGACAATGTATGCACCCTTA+GGG - chr8.1:53595731-53595750 MS.gene007834:CDS 40.0%
TGCTATTGTTGGAAACCATG+AGG - chr8.1:53594481-53594500 MS.gene007834:intron 40.0%
TGTTGCTGGCACTTTAACAT+TGG - chr8.1:53595438-53595457 MS.gene007834:CDS 40.0%
TTACCTGTTATCACAACACG+TGG - chr8.1:53594590-53594609 MS.gene007834:CDS 40.0%
TTAGAACCATCCCCATGAAT+CGG + chr8.1:53594698-53594717 None:intergenic 40.0%
TTTCCACGTGTTGTGATAAC+AGG + chr8.1:53594596-53594615 None:intergenic 40.0%
! AATTCTGCCACTTGAAACTG+GGG + chr8.1:53595983-53596002 None:intergenic 40.0%
! CAACAATTTTGTACTCGGGA+TGG + chr8.1:53594145-53594164 None:intergenic 40.0%
! GAAATTCTGCCACTTGAAAC+TGG + chr8.1:53595985-53596004 None:intergenic 40.0%
! GGAATGGAGAGACATTTTGA+AGG - chr8.1:53595088-53595107 MS.gene007834:CDS 40.0%
! TATATGCAGGCTTTTCTCGA+TGG - chr8.1:53594847-53594866 MS.gene007834:CDS 40.0%
! TGTCTTATTAGAAGCCTGCA+AGG - chr8.1:53594391-53594410 MS.gene007834:CDS 40.0%
!! ACCCATGTTTTTAATGCTGC+AGG - chr8.1:53595352-53595371 MS.gene007834:CDS 40.0%
!! AGACATTTTGAAGGATCCGA+AGG - chr8.1:53595097-53595116 MS.gene007834:CDS 40.0%
!! CATTCATGTCAGTACTGATG+AGG - chr8.1:53594436-53594455 MS.gene007834:CDS 40.0%
!! CCTTTGAAGTTCTTGCTGTT+TGG - chr8.1:53595202-53595221 MS.gene007834:CDS 40.0%
!! GATCATCGAGAAAGTATCTC+TGG + chr8.1:53594919-53594938 None:intergenic 40.0%
!! TCAGTACTGATGAGGTCTAT+GGG - chr8.1:53594444-53594463 MS.gene007834:CDS 40.0%
!! TGAAGTTCTTGCTGTTTGGT+AGG - chr8.1:53595206-53595225 MS.gene007834:CDS 40.0%
!! TTCATCCTTTTGGCTATGCA+AGG - chr8.1:53594662-53594681 MS.gene007834:CDS 40.0%
AAATCGGCATACGAACCCTA+AGG + chr8.1:53595749-53595768 None:intergenic 45.0%
AAATGTCTCTCCATTCCACC+AGG + chr8.1:53595085-53595104 None:intergenic 45.0%
AATCGGCATACGAACCCTAA+GGG + chr8.1:53595748-53595767 None:intergenic 45.0%
ACATTGACCCCAGTTTCAAG+TGG - chr8.1:53595973-53595992 MS.gene007834:CDS 45.0%
AGTTGTTCTTCACAAGGGAG+AGG - chr8.1:53594763-53594782 MS.gene007834:CDS 45.0%
ATCATCAACATCCTCGGATG+AGG + chr8.1:53595061-53595080 None:intergenic 45.0%
ATCGGGACAAAGAAGGAAAG+GGG - chr8.1:53594803-53594822 MS.gene007834:CDS 45.0%
CAAAAATCCTGATTGGTGGG+GGG - chr8.1:53595015-53595034 MS.gene007834:CDS 45.0%
CCAAAAATCCTGATTGGTGG+GGG - chr8.1:53595014-53595033 MS.gene007834:CDS 45.0%
CCAATCAACATTGGGTCTTC+CGG + chr8.1:53595383-53595402 None:intergenic 45.0%
CGAAGCAACAATGAGATGGA+TGG - chr8.1:53596041-53596060 MS.gene007834:CDS 45.0%
CGACCCTTTGCGTATTCATA+TGG + chr8.1:53595283-53595302 None:intergenic 45.0%
GAAGAAGTTGAGAAGCCTCA+TGG + chr8.1:53594499-53594518 None:intergenic 45.0%
GGAAAGACTCTTCCGATTCA+TGG - chr8.1:53594683-53594702 MS.gene007834:CDS 45.0%
GGAAGACAAGCCCAATTTCA+TGG - chr8.1:53595567-53595586 MS.gene007834:CDS 45.0%
GTATTGCGAAGATGTTGCTG+AGG - chr8.1:53594733-53594752 MS.gene007834:CDS 45.0%
TGCTCGAAGCAACAATGAGA+TGG - chr8.1:53596037-53596056 MS.gene007834:CDS 45.0%
TGCTTGTCATGGCATATGGT+AGG - chr8.1:53594558-53594577 MS.gene007834:intron 45.0%
TGGCAGTGTTCTTGGTTGAT+GGG + chr8.1:53595168-53595187 None:intergenic 45.0%
TGGCATATGGTAGGTCATAC+GGG - chr8.1:53594567-53594586 MS.gene007834:intron 45.0%
TGGGAGATGATTTCGAAGGA+AGG + chr8.1:53594208-53594227 None:intergenic 45.0%
TTAGAAGCCTGCAAGGTTAC+TGG - chr8.1:53594398-53594417 MS.gene007834:CDS 45.0%
TTCCTCCTTGAAACCAATGC+CGG + chr8.1:53595551-53595570 None:intergenic 45.0%
TTGCATCTCATGTTGCCAAC+CGG - chr8.1:53594108-53594127 MS.gene007834:CDS 45.0%
! ATCTGGAACTTCACTAACCC+TGG - chr8.1:53595909-53595928 MS.gene007834:CDS 45.0%
! TTTAATGCTGCAGGTGTCAC+CGG - chr8.1:53595361-53595380 MS.gene007834:CDS 45.0%
! TTTTGTACTCGGGATGGCTT+CGG + chr8.1:53594139-53594158 None:intergenic 45.0%
!! ATGGGGATGGTTCTAATGTG+AGG - chr8.1:53594702-53594721 MS.gene007834:CDS 45.0%
!! CAGTACTGATGAGGTCTATG+GGG - chr8.1:53594445-53594464 MS.gene007834:CDS 45.0%
!! CCTGCTTTTGTTGCAGAGTA+CGG + chr8.1:53594530-53594549 None:intergenic 45.0%
!! CTGCTTTTGTTGCAGAGTAC+GGG + chr8.1:53594529-53594548 None:intergenic 45.0%
!! GTCAGTACTGATGAGGTCTA+TGG - chr8.1:53594443-53594462 MS.gene007834:CDS 45.0%
!! TCTTGCTGTTTGGTAGGACA+GGG - chr8.1:53595212-53595231 MS.gene007834:CDS 45.0%
!! TTCTTGCTGTTTGGTAGGAC+AGG - chr8.1:53595211-53595230 MS.gene007834:CDS 45.0%
AAAACCTTGGTTGGGCTGAG+AGG - chr8.1:53594948-53594967 MS.gene007834:CDS 50.0%
AAGTGCCAGCAACATTAGCG+CGG + chr8.1:53595432-53595451 None:intergenic 50.0%
ACTCTTCCGATTCATGGGGA+TGG - chr8.1:53594689-53594708 MS.gene007834:CDS 50.0%
AGGAGCGGAAATGCTTGTCA+TGG - chr8.1:53594547-53594566 MS.gene007834:intron 50.0%
AGGTTACTGGCCAGATCAGA+AGG - chr8.1:53594411-53594430 MS.gene007834:CDS 50.0%
CACTCTTGAAGAGCAAGCCA+AGG - chr8.1:53596004-53596023 MS.gene007834:CDS 50.0%
CCAGGCATCATCAACATCCT+CGG + chr8.1:53595067-53595086 None:intergenic 50.0%
CCGGAAGACCCAATGTTGAT+TGG - chr8.1:53595380-53595399 MS.gene007834:CDS 50.0%
CCGTACTCTGCAACAAAAGC+AGG - chr8.1:53594527-53594546 MS.gene007834:intron 50.0%
CTCTGCAACAAAAGCAGGAG+CGG - chr8.1:53594532-53594551 MS.gene007834:intron 50.0%
CTTCAGTCCTTCATCCCATG+TGG + chr8.1:53594975-53594994 None:intergenic 50.0%
GGGAGTTATCGATGTAGCCA+AGG - chr8.1:53594823-53594842 MS.gene007834:CDS 50.0%
GTGGCAGTGTTCTTGGTTGA+TGG + chr8.1:53595169-53595188 None:intergenic 50.0%
GTTCTTCACAAGGGAGAGGT+TGG - chr8.1:53594767-53594786 MS.gene007834:CDS 50.0%
GTTGCAGAGTACGGGTTTGT+GGG + chr8.1:53594521-53594540 None:intergenic 50.0%
TACGATGCAGCACATCCAGA+AGG - chr8.1:53595523-53595542 MS.gene007834:CDS 50.0%
TGTTGCAGAGTACGGGTTTG+TGG + chr8.1:53594522-53594541 None:intergenic 50.0%
TTTGGTAGGACAGGGTGGAT+TGG - chr8.1:53595220-53595239 MS.gene007834:CDS 50.0%
! CAAAGGATGTTTCTGCGGAG+TGG + chr8.1:53595188-53595207 None:intergenic 50.0%
! CCCCCACCAATCAGGATTTT+TGG + chr8.1:53595017-53595036 None:intergenic 50.0%
! TGATGCGGGATTTTCGCCTT+CGG + chr8.1:53595116-53595135 None:intergenic 50.0%
!! AGGATGTTGATGATGCCTGG+TGG - chr8.1:53595067-53595086 MS.gene007834:CDS 50.0%
!! GTTGATGATGCCTGGTGGAA+TGG - chr8.1:53595072-53595091 MS.gene007834:CDS 50.0%
AAACCAATGCCGGAGCCTTC+TGG + chr8.1:53595541-53595560 None:intergenic 55.0%
ACCATCCGCGCTAATGTTGC+TGG - chr8.1:53595424-53595443 MS.gene007834:CDS 55.0%
ATCCAGCTGCCCCAGTAATG+AGG + chr8.1:53594085-53594104 None:intergenic 55.0%
ATCCTCATTACTGGGGCAGC+TGG - chr8.1:53594080-53594099 MS.gene007834:CDS 55.0%
CATTGTGGCTCACAGCACCA+GGG + chr8.1:53595929-53595948 None:intergenic 55.0%
GAGAGGACCACATGGGATGA+AGG - chr8.1:53594965-53594984 MS.gene007834:CDS 55.0%
GATCTGGCCAGTAACCTTGC+AGG + chr8.1:53594408-53594427 None:intergenic 55.0%
GCTGATGTGTGCAGAGAGCA+CGG - chr8.1:53595460-53595479 MS.gene007834:CDS 55.0%
GTGCATTGCTTCCTCATCCG+AGG - chr8.1:53595047-53595066 MS.gene007834:CDS 55.0%
TCATTGTGGCTCACAGCACC+AGG + chr8.1:53595930-53595949 None:intergenic 55.0%
TCGAGCAGCGACAATCACCT+TGG + chr8.1:53596024-53596043 None:intergenic 55.0%
TTGGGCTGAGAGGACCACAT+GGG - chr8.1:53594958-53594977 MS.gene007834:CDS 55.0%
! CTGATGTGTGCAGAGAGCAC+GGG - chr8.1:53595461-53595480 MS.gene007834:CDS 55.0%
! TGCTGTTTGGTAGGACAGGG+TGG - chr8.1:53595215-53595234 MS.gene007834:CDS 55.0%
!! AGGCTCCGGCATTGGTTTCA+AGG - chr8.1:53595543-53595562 MS.gene007834:CDS 55.0%
!! AGGGTGGATTGGAGGTTTGC+TGG - chr8.1:53595231-53595250 MS.gene007834:CDS 55.0%
!! CCGAGGATGTTGATGATGCC+TGG - chr8.1:53595064-53595083 MS.gene007834:CDS 55.0%
!! CTCCGGCATTGGTTTCAAGG+AGG - chr8.1:53595546-53595565 MS.gene007834:CDS 55.0%
!! GGGTGGATTGGAGGTTTGCT+GGG - chr8.1:53595232-53595251 MS.gene007834:CDS 55.0%
!! GGTGGATTGGAGGTTTGCTG+GGG - chr8.1:53595233-53595252 MS.gene007834:CDS 55.0%
ATGGCTTCGGACAAGCCGGT+TGG + chr8.1:53594126-53594145 None:intergenic 60.0%
CATCCAGAAGGCTCCGGCAT+TGG - chr8.1:53595535-53595554 MS.gene007834:CDS 60.0%
CTGACATCCCCCCACCAATC+AGG + chr8.1:53595025-53595044 None:intergenic 60.0%
CTGCGGAGTGGCAGTGTTCT+TGG + chr8.1:53595176-53595195 None:intergenic 60.0%
GATTGGTGGGGGGATGTCAG+TGG - chr8.1:53595025-53595044 MS.gene007834:CDS 60.0%
GCAGCACATCCAGAAGGCTC+CGG - chr8.1:53595529-53595548 MS.gene007834:CDS 60.0%
GCCAGCAACATTAGCGCGGA+TGG + chr8.1:53595428-53595447 None:intergenic 60.0%
GTTGGGCTGAGAGGACCACA+TGG - chr8.1:53594957-53594976 MS.gene007834:CDS 60.0%
TGGTCCTCTCAGCCCAACCA+AGG + chr8.1:53594955-53594974 None:intergenic 60.0%
!! GGTAGGACAGGGTGGATTGG+AGG - chr8.1:53595223-53595242 MS.gene007834:CDS 60.0%
CGGGATGGCTTCGGACAAGC+CGG + chr8.1:53594130-53594149 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 53594056 53596151 53594056 ID=MS.gene007834
chr8.1 mRNA 53594056 53596151 53594056 ID=MS.gene007834.t1;Parent=MS.gene007834
chr8.1 exon 53594589 53596151 53594589 ID=MS.gene007834.t1.exon1;Parent=MS.gene007834.t1
chr8.1 CDS 53594589 53596151 53594589 ID=cds.MS.gene007834.t1;Parent=MS.gene007834.t1
chr8.1 exon 53594056 53594499 53594056 ID=MS.gene007834.t1.exon2;Parent=MS.gene007834.t1
chr8.1 CDS 53594056 53594499 53594056 ID=cds.MS.gene007834.t1;Parent=MS.gene007834.t1
Gene Sequence

>MS.gene007834

ATGGCTTCGTATACACCGAAGAATATCCTCATTACTGGGGCAGCTGGATTTATTGCATCTCATGTTGCCAACCGGCTTGTCCGAAGCCATCCCGAGTACAAAATTGTTGTGCTTGATAAACTAGATTATTGTTCTAATTTAAAGAATCTCCTTCCTTCGAAATCATCTCCCAACTTTAAGTTTGTCAAGGGGGATATCGGTAGTGCTGATCTTGTCAACTACTTGCTTATTACGGAGTCGATTGACACGATAATGCACTTTGCTGCTCAAACTCATGTCGACAACTCATTTGGTAATAGTTTTGAGTTCACCAAGAACAACATATACGGAACTCATGTCTTATTAGAAGCCTGCAAGGTTACTGGCCAGATCAGAAGGTTCATTCATGTCAGTACTGATGAGGTCTATGGGGAGACCGATGAAGATGCTATTGTTGGAAACCATGAGGCTTCTCAACTTCTTCCCACAAACCCGTACTCTGCAACAAAAGCAGGAGCGGAAATGCTTGTCATGGCATATGGTAGGTCATACGGGTTACCTGTTATCACAACACGTGGAAACAATGTTTATGGGCCAAATCAGTTTCCCGAGAAGTTGATTCCAAAGTTCATCCTTTTGGCTATGCAAGGAAAGACTCTTCCGATTCATGGGGATGGTTCTAATGTGAGGAGTTATTTGTATTGCGAAGATGTTGCTGAGGCATTTGAAGTTGTTCTTCACAAGGGAGAGGTTGGCCATGTTTACAATATCGGGACAAAGAAGGAAAGGGGAGTTATCGATGTAGCCAAGGATATATGCAGGCTTTTCTCGATGGATCCAGAAGCTAACATTAAATTTGTTGAGAACAGACCGTTTAATGACCAGAGATACTTTCTCGATGATCAGAAGCTGAAAAACCTTGGTTGGGCTGAGAGGACCACATGGGATGAAGGACTGAAGAAAACCATAGAATGGTATACCAAAAATCCTGATTGGTGGGGGGATGTCAGTGGTGCATTGCTTCCTCATCCGAGGATGTTGATGATGCCTGGTGGAATGGAGAGACATTTTGAAGGATCCGAAGGCGAAAATCCCGCATCAGTCAATTCATCTAATACTCGTATGGTGGTCCCATCAACCAAGAACACTGCCACTCCGCAGAAACATCCTTTGAAGTTCTTGCTGTTTGGTAGGACAGGGTGGATTGGAGGTTTGCTGGGGAAATTGTGTGAAAAGCAAGGAATTCCATATGAATACGCAAAGGGTCGTCTAGAAGATCGTGCATCACTCATTTCTGATATTCAGAATGTGAAGCCAACCCATGTTTTTAATGCTGCAGGTGTCACCGGAAGACCCAATGTTGATTGGTGCGAAACTCATAAAACAGAAACCATCCGCGCTAATGTTGCTGGCACTTTAACATTGGCTGATGTGTGCAGAGAGCACGGGATCTTGATGATAAATTATGCTACTGGCTGCATATTTGAGTACGATGCAGCACATCCAGAAGGCTCCGGCATTGGTTTCAAGGAGGAAGACAAGCCCAATTTCATGGGATCTTTCTATTCCAAAACTAAAGCTATGGTAAGTTTCCTTAAATAGAACGATCTTATTTATCACCTTTGCATTATGAATTTTTTTCAAACAGTAACTTTTAATTGAATTTTGATCAGGTTGAGGAACTCTTGAGAGAATATGACAATGTATGCACCCTTAGGGTTCGTATGCCGATTTCATCTGATCTGAGCAACCCACGCAACTTCATCACAAAGATTTCTCGTTATAACAAAGTTGTCAACATTCCAAACAGCATGACAGTATTGGATGAACTTCTACCTATTTCAATCGAGATGGCAAAGAGAAACTTGAGTGGAATCTGGAACTTCACTAACCCTGGTGCTGTGAGCCACAATGAGATCCTTGAGATGTATAGGGATTACATTGACCCCAGTTTCAAGTGGCAGAATTTCACTCTTGAAGAGCAAGCCAAGGTGATTGTCGCTGCTCGAAGCAACAATGAGATGGATGGTGCCAAATTAAAGAAAGAATTCCCAGAATTGCTTTCCATCAAAGAATCACTTATCAAGTATGTCTTCGTGCCAAACAAGAAGAAATAA
Protein sequence

>MS.gene007834.t1

MASYTPKNILITGAAGFIASHVANRLVRSHPEYKIVVLDKLDYCSNLKNLLPSKSSPNFKFVKGDIGSADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAIVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKTLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERGVIDVAKDICRLFSMDPEANIKFVENRPFNDQRYFLDDQKLKNLGWAERTTWDEGLKKTIEWYTKNPDWWGDVSGALLPHPRMLMMPGGMERHFEGSEGENPASVNSSNTRMVVPSTKNTATPQKHPLKFLLFGRTGWIGGLLGKLCEKQGIPYEYAKGRLEDRASLISDIQNVKPTHVFNAAGVTGRPNVDWCETHKTETIRANVAGTLTLADVCREHGILMINYATGCIFEYDAAHPEGSGIGFKEEDKPNFMGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLSGIWNFTNPGAVSHNEILEMYRDYIDPSFKWQNFTLEEQAKVIVAARSNNEMDGAKLKKEFPELLSIKESLIKYVFVPNKKK