Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053443.t1 | XP_024630846.1 | 99.2 | 521 | 4 | 0 | 1 | 521 | 1 | 521 | 1.10E-299 | 1038.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053443.t1 | O22785 | 74.2 | 519 | 126 | 4 | 1 | 517 | 1 | 513 | 3.9e-226 | 785.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053443.t1 | I3SLA9 | 99.2 | 521 | 4 | 0 | 1 | 521 | 1 | 521 | 7.6e-300 | 1038.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050945 | MS.gene053443 | 0.859445 | 4.12E-63 | -1.69E-46 |
MS.gene053443 | MS.gene054413 | 0.873184 | 1.79E-67 | -1.69E-46 |
MS.gene053443 | MS.gene055765 | 0.80769 | 4.47E-50 | -1.69E-46 |
MS.gene053443 | MS.gene057684 | -0.81599 | 6.97E-52 | -1.69E-46 |
MS.gene053443 | MS.gene05985 | -0.802312 | 5.96E-49 | -1.69E-46 |
MS.gene053443 | MS.gene064838 | -0.812986 | 3.22E-51 | -1.69E-46 |
MS.gene053443 | MS.gene072545 | 0.86004 | 2.72E-63 | -1.69E-46 |
MS.gene053443 | MS.gene073092 | 0.808007 | 3.83E-50 | -1.69E-46 |
MS.gene053443 | MS.gene073887 | 0.81343 | 2.57E-51 | -1.69E-46 |
MS.gene053443 | MS.gene07808 | 0.811389 | 7.18E-51 | -1.69E-46 |
MS.gene053443 | MS.gene07810 | 0.803676 | 3.11E-49 | -1.69E-46 |
MS.gene053443 | MS.gene22663 | 0.835835 | 1.33E-56 | -1.69E-46 |
MS.gene053443 | MS.gene30325 | 0.817234 | 3.67E-52 | -1.69E-46 |
MS.gene053443 | MS.gene48376 | 0.860011 | 2.78E-63 | -1.69E-46 |
MS.gene053443 | MS.gene52766 | -0.813053 | 3.11E-51 | -1.69E-46 |
MS.gene053443 | MS.gene53517 | 0.969467 | 3.64E-130 | -1.69E-46 |
MS.gene053443 | MS.gene68407 | 0.82523 | 5.25E-54 | -1.69E-46 |
MS.gene053443 | MS.gene71642 | -0.824572 | 7.51E-54 | -1.69E-46 |
MS.gene053443 | MS.gene72163 | 0.805108 | 1.57E-49 | -1.69E-46 |
MS.gene053443 | MS.gene73825 | 0.804124 | 2.51E-49 | -1.69E-46 |
MS.gene053443 | MS.gene75146 | 0.808763 | 2.64E-50 | -1.69E-46 |
MS.gene053443 | MS.gene75367 | 0.817031 | 4.07E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053443.t1 | MTR_1g044720 | 98.842 | 518 | 6 | 0 | 4 | 521 | 2 | 519 | 0.0 | 1063 |
MS.gene053443.t1 | MTR_3g045130 | 28.571 | 224 | 148 | 5 | 239 | 458 | 287 | 502 | 9.21e-23 | 102 |
MS.gene053443.t1 | MTR_1g072140 | 24.756 | 307 | 221 | 6 | 211 | 513 | 14 | 314 | 1.05e-21 | 96.3 |
MS.gene053443.t1 | MTR_5g022690 | 27.703 | 296 | 176 | 12 | 239 | 511 | 195 | 475 | 1.38e-19 | 92.0 |
MS.gene053443.t1 | MTR_4g119620 | 28.230 | 209 | 142 | 4 | 224 | 427 | 78 | 283 | 2.56e-18 | 86.7 |
MS.gene053443.t1 | MTR_4g119620 | 24.031 | 258 | 142 | 5 | 261 | 511 | 22 | 232 | 6.22e-15 | 76.3 |
MS.gene053443.t1 | MTR_4g119620 | 27.041 | 196 | 133 | 6 | 237 | 425 | 133 | 325 | 1.86e-12 | 68.9 |
MS.gene053443.t1 | MTR_2g012630 | 28.824 | 170 | 117 | 2 | 259 | 427 | 51 | 217 | 4.41e-18 | 88.6 |
MS.gene053443.t1 | MTR_2g012630 | 26.163 | 172 | 124 | 1 | 250 | 421 | 84 | 252 | 5.39e-15 | 78.6 |
MS.gene053443.t1 | MTR_2g012630 | 27.972 | 143 | 94 | 2 | 237 | 376 | 113 | 249 | 1.38e-12 | 70.9 |
MS.gene053443.t1 | MTR_2g012630 | 28.824 | 170 | 117 | 2 | 259 | 427 | 51 | 217 | 5.08e-18 | 88.2 |
MS.gene053443.t1 | MTR_2g012630 | 26.163 | 172 | 124 | 1 | 250 | 421 | 84 | 252 | 5.66e-15 | 78.6 |
MS.gene053443.t1 | MTR_2g012630 | 27.972 | 143 | 94 | 2 | 237 | 376 | 113 | 249 | 1.30e-12 | 71.2 |
MS.gene053443.t1 | MTR_6g004040 | 26.818 | 220 | 155 | 3 | 235 | 453 | 28 | 242 | 5.09e-18 | 88.2 |
MS.gene053443.t1 | MTR_6g004040 | 24.257 | 202 | 150 | 1 | 226 | 427 | 61 | 259 | 1.86e-15 | 80.1 |
MS.gene053443.t1 | MTR_6g004040 | 23.671 | 207 | 144 | 6 | 310 | 511 | 15 | 212 | 1.42e-11 | 67.4 |
MS.gene053443.t1 | MTR_3g106080 | 28.191 | 188 | 131 | 2 | 237 | 423 | 432 | 616 | 1.60e-16 | 83.2 |
MS.gene053443.t1 | MTR_3g106080 | 27.632 | 228 | 156 | 5 | 239 | 462 | 389 | 611 | 4.05e-16 | 82.0 |
MS.gene053443.t1 | MTR_3g106080 | 28.834 | 163 | 113 | 1 | 239 | 401 | 476 | 635 | 2.00e-15 | 79.7 |
MS.gene053443.t1 | MTR_1g011610 | 26.738 | 187 | 131 | 3 | 238 | 423 | 636 | 817 | 4.00e-14 | 75.9 |
MS.gene053443.t1 | MTR_1g011610 | 26.738 | 187 | 131 | 3 | 238 | 423 | 627 | 808 | 4.15e-14 | 75.9 |
MS.gene053443.t1 | MTR_3g107910 | 27.807 | 187 | 129 | 3 | 238 | 423 | 635 | 816 | 5.36e-14 | 75.5 |
MS.gene053443.t1 | MTR_3g107910 | 27.807 | 187 | 129 | 3 | 238 | 423 | 642 | 823 | 5.57e-14 | 75.5 |
MS.gene053443.t1 | MTR_8g106790 | 25.188 | 266 | 173 | 9 | 169 | 423 | 12 | 262 | 1.13e-13 | 72.4 |
MS.gene053443.t1 | MTR_4g095058 | 21.388 | 533 | 327 | 18 | 35 | 511 | 35 | 531 | 1.08e-12 | 70.9 |
MS.gene053443.t1 | MTR_4g095058 | 27.612 | 268 | 174 | 9 | 220 | 477 | 284 | 541 | 1.40e-12 | 70.5 |
MS.gene053443.t1 | MTR_4g095058 | 22.222 | 351 | 230 | 9 | 195 | 511 | 192 | 533 | 1.13e-12 | 70.9 |
MS.gene053443.t1 | MTR_4g095058 | 27.612 | 268 | 174 | 9 | 220 | 477 | 286 | 543 | 1.19e-12 | 70.9 |
MS.gene053443.t1 | MTR_1g050340 | 24.727 | 275 | 194 | 8 | 238 | 511 | 523 | 785 | 1.34e-12 | 70.9 |
MS.gene053443.t1 | MTR_1g050340 | 24.727 | 275 | 194 | 8 | 238 | 511 | 524 | 786 | 1.37e-12 | 70.9 |
MS.gene053443.t1 | MTR_2g436510 | 28.049 | 164 | 114 | 2 | 262 | 424 | 166 | 326 | 1.38e-12 | 70.1 |
MS.gene053443.t1 | MTR_7g086360 | 25.573 | 262 | 178 | 9 | 259 | 511 | 48 | 301 | 3.18e-12 | 68.2 |
MS.gene053443.t1 | MTR_7g058460 | 25.668 | 187 | 133 | 4 | 238 | 423 | 521 | 702 | 3.85e-12 | 69.3 |
MS.gene053443.t1 | MTR_8g038550 | 23.858 | 197 | 142 | 4 | 239 | 432 | 198 | 389 | 6.32e-12 | 68.6 |
MS.gene053443.t1 | MTR_2g014020 | 25.871 | 201 | 142 | 4 | 222 | 421 | 246 | 440 | 7.16e-12 | 68.2 |
MS.gene053443.t1 | MTR_3g116500 | 27.586 | 203 | 128 | 8 | 239 | 422 | 122 | 324 | 1.17e-11 | 67.0 |
MS.gene053443.t1 | MTR_4g113080 | 24.865 | 185 | 131 | 5 | 238 | 421 | 518 | 695 | 1.21e-11 | 67.8 |
MS.gene053443.t1 | MTR_3g116500 | 27.941 | 204 | 126 | 9 | 239 | 422 | 12 | 214 | 1.31e-11 | 65.5 |
MS.gene053443.t1 | MTR_3g075400 | 26.178 | 191 | 135 | 4 | 239 | 427 | 240 | 426 | 1.84e-11 | 67.0 |
MS.gene053443.t1 | MTR_4g105700 | 26.455 | 189 | 126 | 5 | 250 | 428 | 44 | 229 | 2.05e-11 | 67.0 |
MS.gene053443.t1 | MTR_4g105700 | 28.834 | 163 | 112 | 2 | 260 | 421 | 494 | 653 | 9.24e-11 | 65.1 |
MS.gene053443.t1 | MTR_5g016350 | 22.692 | 260 | 152 | 5 | 221 | 432 | 291 | 549 | 2.80e-11 | 66.2 |
MS.gene053443.t1 | MTR_5g016350 | 22.692 | 260 | 152 | 5 | 221 | 432 | 227 | 485 | 2.89e-11 | 66.2 |
MS.gene053443.t1 | MTR_3g052220 | 25.444 | 169 | 119 | 3 | 273 | 434 | 221 | 389 | 3.75e-11 | 65.9 |
MS.gene053443.t1 | MTR_1g072740 | 22.394 | 259 | 171 | 9 | 257 | 499 | 284 | 528 | 5.65e-11 | 65.5 |
MS.gene053443.t1 | MTR_7g076230 | 25.000 | 252 | 168 | 8 | 268 | 511 | 286 | 524 | 6.86e-11 | 65.5 |
MS.gene053443.t1 | MTR_7g104550 | 23.077 | 208 | 138 | 5 | 235 | 420 | 80 | 287 | 8.60e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053443.t1 | AT2G33340 | 74.181 | 519 | 126 | 4 | 1 | 517 | 1 | 513 | 0.0 | 811 |
MS.gene053443.t1 | AT2G33340 | 74.181 | 519 | 126 | 4 | 1 | 517 | 1 | 513 | 0.0 | 811 |
MS.gene053443.t1 | AT1G04510 | 73.333 | 525 | 131 | 4 | 1 | 522 | 1 | 519 | 0.0 | 801 |
MS.gene053443.t1 | AT1G04510 | 73.143 | 525 | 132 | 4 | 1 | 522 | 1 | 519 | 0.0 | 801 |
MS.gene053443.t1 | AT2G33340 | 74.385 | 488 | 117 | 4 | 1 | 486 | 1 | 482 | 0.0 | 760 |
MS.gene053443.t1 | AT2G41500 | 27.682 | 289 | 192 | 9 | 238 | 521 | 269 | 545 | 1.02e-27 | 117 |
MS.gene053443.t1 | AT2G41500 | 27.682 | 289 | 192 | 9 | 238 | 521 | 269 | 545 | 1.02e-27 | 117 |
MS.gene053443.t1 | AT3G49660 | 29.412 | 204 | 134 | 6 | 231 | 427 | 76 | 276 | 1.03e-17 | 84.7 |
MS.gene053443.t1 | AT3G49660 | 24.436 | 266 | 191 | 5 | 254 | 516 | 59 | 317 | 1.55e-16 | 81.3 |
MS.gene053443.t1 | AT3G49660 | 24.885 | 217 | 151 | 5 | 261 | 469 | 19 | 231 | 3.57e-14 | 73.9 |
MS.gene053443.t1 | AT5G08390 | 25.000 | 260 | 173 | 10 | 259 | 511 | 9 | 253 | 1.54e-17 | 86.7 |
MS.gene053443.t1 | AT5G08390 | 25.773 | 194 | 140 | 2 | 235 | 427 | 28 | 218 | 8.56e-17 | 84.3 |
MS.gene053443.t1 | AT5G08390 | 22.772 | 202 | 153 | 1 | 226 | 427 | 61 | 259 | 2.49e-13 | 73.2 |
MS.gene053443.t1 | AT5G23430 | 25.871 | 201 | 145 | 2 | 235 | 434 | 28 | 225 | 2.93e-17 | 85.9 |
MS.gene053443.t1 | AT5G23430 | 23.267 | 202 | 152 | 1 | 226 | 427 | 61 | 259 | 6.74e-14 | 75.1 |
MS.gene053443.t1 | AT5G23430 | 25.871 | 201 | 145 | 2 | 235 | 434 | 28 | 225 | 2.93e-17 | 85.9 |
MS.gene053443.t1 | AT5G23430 | 23.267 | 202 | 152 | 1 | 226 | 427 | 61 | 259 | 6.74e-14 | 75.1 |
MS.gene053443.t1 | AT5G23430 | 25.871 | 201 | 145 | 2 | 235 | 434 | 28 | 225 | 2.95e-17 | 85.9 |
MS.gene053443.t1 | AT5G23430 | 23.267 | 202 | 152 | 1 | 226 | 427 | 61 | 259 | 6.57e-14 | 75.1 |
MS.gene053443.t1 | AT5G56130 | 25.828 | 302 | 163 | 10 | 264 | 512 | 18 | 311 | 2.90e-16 | 80.1 |
MS.gene053443.t1 | AT1G61210 | 26.020 | 196 | 139 | 3 | 259 | 453 | 51 | 241 | 2.73e-15 | 79.7 |
MS.gene053443.t1 | AT1G61210 | 24.419 | 172 | 127 | 1 | 250 | 421 | 84 | 252 | 1.08e-12 | 71.2 |
MS.gene053443.t1 | AT1G61210 | 25.463 | 216 | 146 | 7 | 301 | 511 | 6 | 211 | 2.30e-12 | 70.5 |
MS.gene053443.t1 | AT1G11160 | 22.780 | 259 | 186 | 8 | 256 | 511 | 5 | 252 | 2.89e-15 | 79.7 |
MS.gene053443.t1 | AT1G11160 | 25.581 | 172 | 125 | 1 | 250 | 421 | 84 | 252 | 1.27e-14 | 77.4 |
MS.gene053443.t1 | AT1G11160 | 22.780 | 259 | 186 | 8 | 256 | 511 | 5 | 252 | 2.94e-15 | 79.7 |
MS.gene053443.t1 | AT1G11160 | 25.581 | 172 | 125 | 1 | 250 | 421 | 84 | 252 | 1.25e-14 | 77.4 |
MS.gene053443.t1 | AT1G61210 | 26.020 | 196 | 139 | 3 | 259 | 453 | 51 | 241 | 3.14e-15 | 79.7 |
MS.gene053443.t1 | AT1G61210 | 24.419 | 172 | 127 | 1 | 250 | 421 | 84 | 252 | 1.24e-12 | 71.2 |
MS.gene053443.t1 | AT1G61210 | 25.463 | 216 | 146 | 7 | 301 | 511 | 6 | 211 | 2.91e-12 | 70.1 |
MS.gene053443.t1 | AT1G11160 | 22.780 | 259 | 186 | 8 | 256 | 511 | 5 | 252 | 3.21e-15 | 79.3 |
MS.gene053443.t1 | AT1G11160 | 25.581 | 172 | 125 | 1 | 250 | 421 | 84 | 252 | 1.42e-14 | 77.4 |
MS.gene053443.t1 | AT1G61210 | 26.020 | 196 | 139 | 3 | 259 | 453 | 51 | 241 | 3.27e-15 | 79.3 |
MS.gene053443.t1 | AT1G61210 | 24.419 | 172 | 127 | 1 | 250 | 421 | 84 | 252 | 1.25e-12 | 71.2 |
MS.gene053443.t1 | AT1G61210 | 25.463 | 216 | 146 | 7 | 301 | 511 | 6 | 211 | 3.20e-12 | 70.1 |
MS.gene053443.t1 | AT5G25150 | 22.985 | 335 | 217 | 9 | 167 | 476 | 305 | 623 | 3.65e-15 | 79.0 |
MS.gene053443.t1 | AT4G02730 | 24.306 | 288 | 197 | 9 | 240 | 518 | 17 | 292 | 4.02e-15 | 77.0 |
MS.gene053443.t1 | AT4G02730 | 21.311 | 244 | 187 | 4 | 237 | 478 | 56 | 296 | 2.61e-12 | 68.6 |
MS.gene053443.t1 | AT5G25150 | 22.985 | 335 | 217 | 9 | 167 | 476 | 305 | 623 | 4.03e-15 | 79.0 |
MS.gene053443.t1 | AT1G11160 | 23.684 | 190 | 141 | 2 | 233 | 421 | 24 | 210 | 9.96e-15 | 77.8 |
MS.gene053443.t1 | AT1G11160 | 22.381 | 210 | 155 | 5 | 303 | 511 | 8 | 210 | 2.76e-14 | 76.6 |
MS.gene053443.t1 | AT1G11160 | 24.742 | 194 | 140 | 3 | 261 | 453 | 11 | 199 | 5.35e-14 | 75.5 |
MS.gene053443.t1 | AT1G18080 | 25.888 | 197 | 141 | 3 | 231 | 423 | 68 | 263 | 9.75e-14 | 72.8 |
MS.gene053443.t1 | AT4G15900 | 28.049 | 164 | 114 | 2 | 262 | 424 | 172 | 332 | 1.56e-13 | 73.2 |
MS.gene053443.t1 | AT4G15900 | 27.556 | 225 | 150 | 7 | 226 | 446 | 262 | 477 | 3.17e-11 | 66.2 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 526 | 724 | 1.75e-13 | 73.9 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 507 | 705 | 1.79e-13 | 73.6 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 507 | 705 | 1.79e-13 | 73.6 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 507 | 705 | 1.79e-13 | 73.6 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 507 | 705 | 1.79e-13 | 73.6 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 507 | 705 | 1.79e-13 | 73.6 |
MS.gene053443.t1 | AT2G32700 | 24.390 | 205 | 147 | 5 | 221 | 423 | 505 | 703 | 1.81e-13 | 73.6 |
MS.gene053443.t1 | AT5G67320 | 23.372 | 261 | 150 | 6 | 220 | 432 | 321 | 579 | 3.92e-13 | 72.4 |
MS.gene053443.t1 | AT5G13480 | 24.771 | 218 | 118 | 6 | 258 | 432 | 103 | 317 | 2.81e-12 | 69.7 |
MS.gene053443.t1 | AT5G13480 | 26.923 | 156 | 109 | 3 | 227 | 380 | 240 | 392 | 1.68e-11 | 67.4 |
MS.gene053443.t1 | AT1G48630 | 24.876 | 201 | 137 | 6 | 231 | 423 | 68 | 262 | 2.99e-12 | 68.2 |
MS.gene053443.t1 | AT1G48630 | 26.296 | 270 | 172 | 13 | 256 | 511 | 4 | 260 | 7.00e-11 | 64.3 |
MS.gene053443.t1 | AT5G13480 | 24.771 | 218 | 118 | 6 | 258 | 432 | 103 | 317 | 3.03e-12 | 69.7 |
MS.gene053443.t1 | AT5G13480 | 26.923 | 156 | 109 | 3 | 227 | 380 | 240 | 392 | 1.77e-11 | 67.0 |
MS.gene053443.t1 | AT5G13480 | 24.771 | 218 | 118 | 6 | 258 | 432 | 115 | 329 | 3.33e-12 | 69.7 |
MS.gene053443.t1 | AT5G13480 | 26.923 | 156 | 109 | 3 | 227 | 380 | 252 | 404 | 1.76e-11 | 67.4 |
MS.gene053443.t1 | AT5G13480 | 24.771 | 218 | 118 | 6 | 258 | 432 | 126 | 340 | 3.45e-12 | 69.3 |
MS.gene053443.t1 | AT5G13480 | 26.923 | 156 | 109 | 3 | 227 | 380 | 263 | 415 | 1.99e-11 | 67.0 |
MS.gene053443.t1 | AT3G18130 | 24.876 | 201 | 137 | 6 | 231 | 423 | 68 | 262 | 3.50e-12 | 68.2 |
MS.gene053443.t1 | AT3G18130 | 26.667 | 270 | 171 | 13 | 256 | 511 | 4 | 260 | 8.54e-11 | 63.9 |
MS.gene053443.t1 | AT1G10580 | 23.622 | 254 | 174 | 11 | 257 | 499 | 273 | 517 | 4.90e-12 | 68.9 |
MS.gene053443.t1 | AT3G16650 | 25.403 | 248 | 168 | 6 | 188 | 424 | 84 | 325 | 5.81e-12 | 68.6 |
MS.gene053443.t1 | AT5G16750 | 27.072 | 181 | 122 | 4 | 250 | 423 | 44 | 221 | 7.22e-12 | 68.6 |
MS.gene053443.t1 | AT5G16750 | 26.994 | 163 | 115 | 2 | 260 | 421 | 493 | 652 | 3.21e-11 | 66.6 |
MS.gene053443.t1 | AT5G16750 | 22.951 | 183 | 131 | 2 | 205 | 380 | 473 | 652 | 4.69e-11 | 66.2 |
MS.gene053443.t1 | AT4G32551 | 25.668 | 187 | 133 | 5 | 238 | 423 | 703 | 884 | 7.85e-12 | 68.6 |
MS.gene053443.t1 | AT4G32551 | 25.668 | 187 | 133 | 5 | 238 | 423 | 665 | 846 | 8.00e-12 | 68.6 |
MS.gene053443.t1 | AT2G43770 | 25.362 | 276 | 161 | 11 | 259 | 511 | 46 | 299 | 1.21e-11 | 66.6 |
MS.gene053443.t1 | AT2G43770 | 24.648 | 284 | 193 | 12 | 238 | 510 | 67 | 340 | 2.47e-11 | 65.9 |
MS.gene053443.t1 | AT1G62020 | 23.913 | 230 | 139 | 7 | 234 | 430 | 61 | 287 | 5.89e-11 | 65.9 |
Find 107 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATCAATCGAATAGGATTT+TGG | 0.110325 | 1.3:+26650779 | MS.gene053443:intron |
GACTGCAATGCTGCTCTTTC+CGG | 0.154596 | 1.3:+26654008 | MS.gene053443:CDS |
GCATTAGCTGTCACAGAATT+TGG | 0.171506 | 1.3:-26653705 | None:intergenic |
GACCGGAATCTTCGAATATT+TGG | 0.195869 | 1.3:+26658547 | MS.gene053443:CDS |
ACAGAATTTGGAGTAGAAAT+AGG | 0.203246 | 1.3:-26653693 | None:intergenic |
CATCCCGATGGTCTTATTCT+TGG | 0.266936 | 1.3:+26657284 | MS.gene053443:CDS |
AAAACTCTTCCTGATTTATC+TGG | 0.271266 | 1.3:+26658345 | MS.gene053443:CDS |
GTGCAGGCAGCAAGCATTCC+TGG | 0.291861 | 1.3:+26651030 | MS.gene053443:CDS |
TCTTGATATCCTTCATTCTA+AGG | 0.302903 | 1.3:+26654309 | MS.gene053443:CDS |
TTTGGGAAGTGTCCAGTTAC+AGG | 0.305772 | 1.3:+26650797 | MS.gene053443:CDS |
CGTGATTGCAAGGCTTAAAA+AGG | 0.320139 | 1.3:+26653623 | MS.gene053443:CDS |
TTTGACACCACAGGCTCATC+TGG | 0.321677 | 1.3:-26648517 | None:intergenic |
GGATCCTACCTTGCAGTTGC+AGG | 0.322521 | 1.3:+26657854 | MS.gene053443:CDS |
ATTTCAGATTCCTGCGACTT+TGG | 0.324712 | 1.3:+26654207 | MS.gene053443:intron |
CAGATTCTCTTGTTAAGATC+TGG | 0.328133 | 1.3:+26657318 | MS.gene053443:CDS |
GTTGGAGTTGCTGAGTCATA+TGG | 0.342835 | 1.3:-26657708 | None:intergenic |
CAGTTGCAGGCTCTGATGTT+AGG | 0.348094 | 1.3:+26657867 | MS.gene053443:CDS |
GCAAATGTTGCTAAGTTTGA+TGG | 0.357923 | 1.3:+26657450 | MS.gene053443:CDS |
GGAATGCTTGCTGCCTGCAC+TGG | 0.360377 | 1.3:-26651027 | None:intergenic |
CTCATGATGGTGTAAAGCTT+TGG | 0.362749 | 1.3:+26657649 | MS.gene053443:CDS |
TTTGTGACTGCATCACTTGA+TGG | 0.370664 | 1.3:+26656945 | MS.gene053443:CDS |
TGCAGTCACAAAGTAATTAT+TGG | 0.371362 | 1.3:-26656934 | None:intergenic |
CTTGCTGCCTGCACTGGTCT+AGG | 0.374275 | 1.3:-26651021 | None:intergenic |
ACTGCAATGCTGCTCTTTCC+GGG | 0.374696 | 1.3:+26654009 | MS.gene053443:CDS |
GGATGTAATTTCTTCGCATT+AGG | 0.388848 | 1.3:-26653951 | None:intergenic |
ACTCAGCGGTCACTCTAAAA+AGG | 0.394859 | 1.3:+26654592 | MS.gene053443:CDS |
AAGCGTGAAGTTTGTAGGTC+AGG | 0.396085 | 1.3:+26654698 | MS.gene053443:CDS |
CTTAAACAAAACTAGCAAAC+AGG | 0.402528 | 1.3:+26654276 | MS.gene053443:CDS |
CTTCCTGATTTATCTGGAAC+AGG | 0.403899 | 1.3:+26658351 | MS.gene053443:CDS |
CAGGGTGAATCTATCATAAC+TGG | 0.405085 | 1.3:+26654717 | MS.gene053443:CDS |
GGCCAAATATTCGAAGATTC+CGG | 0.405806 | 1.3:-26658549 | None:intergenic |
AAATCCACATGTGTAAAATT+CGG | 0.407717 | 1.3:+26658490 | MS.gene053443:CDS |
GATATTGTGCCGATCAAAAC+AGG | 0.410359 | 1.3:+26650839 | MS.gene053443:CDS |
GTAAGCGGCTCTCCTGTAAC+TGG | 0.411774 | 1.3:-26650809 | None:intergenic |
TCATGATGGTGTAAAGCTTT+GGG | 0.421276 | 1.3:+26657650 | MS.gene053443:CDS |
CTGCTTGCCGCGTGATTGCA+AGG | 0.421314 | 1.3:+26653613 | MS.gene053443:CDS |
TATTGCAGACAGTTCGTTTG+TGG | 0.428520 | 1.3:+26655164 | MS.gene053443:intron |
CTTCGAATATTTGGCCAACC+TGG | 0.429124 | 1.3:+26658556 | MS.gene053443:CDS |
ATTAATCGAGAGGCATATAA+TGG | 0.430404 | 1.3:+26648567 | MS.gene053443:CDS |
CATAACTGGTTCAGCAGATA+AGG | 0.431703 | 1.3:+26654731 | MS.gene053443:CDS |
ATACTTAGCAGTTGCATCAA+TGG | 0.445405 | 1.3:+26658525 | MS.gene053443:CDS |
TTACAGGACATAATCGCAAC+TGG | 0.446375 | 1.3:+26654512 | MS.gene053443:intron |
CAGAATTTGGAGTAGAAATA+GGG | 0.462176 | 1.3:-26653692 | None:intergenic |
CTGCATCACTTGATGGCAGC+TGG | 0.462700 | 1.3:+26656952 | MS.gene053443:CDS |
TACAGGAGAGCCGCTTACTC+TGG | 0.463440 | 1.3:+26650814 | MS.gene053443:CDS |
AGATTCTCTTGTTAAGATCT+GGG | 0.470622 | 1.3:+26657319 | MS.gene053443:CDS |
GAGTCAATACCAGAGTTTGT+TGG | 0.471796 | 1.3:-26657726 | None:intergenic |
GCAAGCATTCCTGGCATGCT+TGG | 0.474027 | 1.3:+26651039 | MS.gene053443:CDS |
GTAACAAGCGTGAAGTTTGT+AGG | 0.474487 | 1.3:+26654693 | MS.gene053443:CDS |
GTAGTATCCATTCTCAGAAA+AGG | 0.476806 | 1.3:-26657499 | None:intergenic |
ATGCTCCTGTTCATAGCAAT+GGG | 0.482893 | 1.3:+26653724 | MS.gene053443:CDS |
ATTATACTAGAAGATATTCC+AGG | 0.483629 | 1.3:-26653972 | None:intergenic |
AGACAGTTCGTTTGTGGCAA+GGG | 0.486431 | 1.3:+26655170 | MS.gene053443:intron |
AGCTGCAGATGTATAGCCTT+CGG | 0.487652 | 1.3:-26657258 | None:intergenic |
ATGCTGCTCTTTCCGGGAAG+AGG | 0.487878 | 1.3:+26654015 | MS.gene053443:CDS |
CTCATTTATAGGAATGGGAT+GGG | 0.490049 | 1.3:+26651284 | MS.gene053443:intron |
GATGGTCTTATTCTTGGAAC+TGG | 0.491366 | 1.3:+26657290 | MS.gene053443:CDS |
CAGACAGTTCGTTTGTGGCA+AGG | 0.499376 | 1.3:+26655169 | MS.gene053443:intron |
AAAGTAATACCTTAGAATGA+AGG | 0.500411 | 1.3:-26654318 | None:intergenic |
AATGCTCCTGTTCATAGCAA+TGG | 0.505400 | 1.3:+26653723 | MS.gene053443:CDS |
TGGAACATTCCAAGCATGCC+AGG | 0.505625 | 1.3:-26651048 | None:intergenic |
AGCTGCTGATGACGAGGAGT+TGG | 0.507322 | 1.3:+26653926 | MS.gene053443:intron |
CCTCATTTATAGGAATGGGA+TGG | 0.507870 | 1.3:+26651283 | MS.gene053443:intron |
TTGGAGTTGCTGAGTCATAT+GGG | 0.509156 | 1.3:-26657707 | None:intergenic |
GTACCTGTTCCAGATAAATC+AGG | 0.512887 | 1.3:-26658354 | None:intergenic |
AGTCATATGGGCCATAGTCC+CGG | 0.517272 | 1.3:-26657695 | None:intergenic |
CAAAGTAATTATTGGTGGCA+TGG | 0.525985 | 1.3:-26656926 | None:intergenic |
CTAAGTTTGATGGACATGTC+GGG | 0.530267 | 1.3:+26657460 | MS.gene053443:CDS |
AGTGAAGCCTAGACCAGTGC+AGG | 0.532479 | 1.3:+26651014 | MS.gene053443:CDS |
AGCGTGAAGTTTGTAGGTCA+GGG | 0.533196 | 1.3:+26654699 | MS.gene053443:CDS |
AAAAGGAACGAGACGAAGCT+AGG | 0.533326 | 1.3:+26653640 | MS.gene053443:CDS |
TTGTCAGAAATATCTTCGCC+AGG | 0.533777 | 1.3:-26658574 | None:intergenic |
GTTCCAAGAATAAGACCATC+GGG | 0.534047 | 1.3:-26657287 | None:intergenic |
TAACTGCAAACAGATCTTGA+AGG | 0.534904 | 1.3:+26655210 | MS.gene053443:CDS |
GTTCATAGCAATGGGAAAAG+AGG | 0.541436 | 1.3:+26653732 | MS.gene053443:CDS |
TTGCAAATGTGAAATCTGAA+TGG | 0.541920 | 1.3:+26658313 | MS.gene053443:CDS |
CAGAAATATCTTCGCCAGGT+TGG | 0.544143 | 1.3:-26658570 | None:intergenic |
GTAGCTAATACTTGTCCTGA+TGG | 0.546408 | 1.3:-26654569 | None:intergenic |
TTGTGGCAAGGGTCAGATGA+TGG | 0.550255 | 1.3:+26655181 | MS.gene053443:CDS |
TCAACAGAAGCCAAAGTCGC+AGG | 0.550956 | 1.3:-26654217 | None:intergenic |
TTCAGGAACTTGTCTGACTC+AGG | 0.555913 | 1.3:+26656992 | MS.gene053443:CDS |
AGCTAGGTCTATACTTGCAC+AGG | 0.561984 | 1.3:+26653656 | MS.gene053443:CDS |
TAGGTTTCTGACTCTTCCGA+AGG | 0.569370 | 1.3:+26657242 | MS.gene053443:intron |
CTATACTTGCACAGGCAGAA+AGG | 0.575588 | 1.3:+26653664 | MS.gene053443:CDS |
TAGCAGTTGCATCAATGGAC+CGG | 0.577692 | 1.3:+26658530 | MS.gene053443:CDS |
TCAGCAACTCCAACAAACTC+TGG | 0.577891 | 1.3:+26657717 | MS.gene053443:CDS |
AGGCTCATCTGGAACCTCAC+CGG | 0.580055 | 1.3:-26648506 | None:intergenic |
AGAGCCTGCAACTGCAAGGT+AGG | 0.584256 | 1.3:-26657858 | None:intergenic |
GTTAAGTCATGCTCTATACC+AGG | 0.586754 | 1.3:+26651360 | MS.gene053443:CDS |
AATGCGAAGAAATTACATCC+TGG | 0.591581 | 1.3:+26653954 | MS.gene053443:CDS |
AGTCACAAAGTAATTATTGG+TGG | 0.592605 | 1.3:-26656931 | None:intergenic |
GCTAAGTTTGATGGACATGT+CGG | 0.592762 | 1.3:+26657459 | MS.gene053443:CDS |
AGTTCCAAGAATAAGACCAT+CGG | 0.599921 | 1.3:-26657288 | None:intergenic |
CTAATACTTGTCCTGATGGA+CGG | 0.602167 | 1.3:-26654565 | None:intergenic |
CATCAGAGCCTGCAACTGCA+AGG | 0.620846 | 1.3:-26657862 | None:intergenic |
TCGAGAAGAGATTAATCGAG+AGG | 0.622459 | 1.3:+26648557 | MS.gene053443:CDS |
ACAATATCATCCAGAGTAAG+CGG | 0.631161 | 1.3:-26650824 | None:intergenic |
AGCAGCAGTTGCATACAGCA+AGG | 0.634251 | 1.3:+26651332 | MS.gene053443:CDS |
TGATAGACCGCAGCTCATGA+TGG | 0.652388 | 1.3:+26657636 | MS.gene053443:intron |
TGTGCCGATCAAAACAGGCA+AGG | 0.675176 | 1.3:+26650844 | MS.gene053443:CDS |
TTAAACAAAACTAGCAAACA+GGG | 0.680512 | 1.3:+26654277 | MS.gene053443:CDS |
CTTTACACCATCATGAGCTG+CGG | 0.684333 | 1.3:-26657643 | None:intergenic |
GCAGTGGAGTTTGACCACAG+TGG | 0.700459 | 1.3:+26657833 | MS.gene053443:intron |
TGAGGTTCCAGATGAGCCTG+TGG | 0.703744 | 1.3:+26648510 | MS.gene053443:CDS |
TGAGAATGGATACTACCTTG+CGG | 0.717359 | 1.3:+26657506 | MS.gene053443:CDS |
CAAGTATTAGCTACACTCAG+CGG | 0.734442 | 1.3:+26654578 | MS.gene053443:CDS |
CTGCAAGGTAGGATCCACTG+TGG | 0.800585 | 1.3:-26657847 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 26648382 | 26658603 | 26648382 | ID=MS.gene053443 |
chr1.3 | mRNA | 26648382 | 26658603 | 26648382 | ID=MS.gene053443.t1;Parent=MS.gene053443 |
chr1.3 | exon | 26648382 | 26648394 | 26648382 | ID=MS.gene053443.t1.exon1;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26648382 | 26648394 | 26648382 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26648503 | 26648588 | 26648503 | ID=MS.gene053443.t1.exon2;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26648503 | 26648588 | 26648503 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26650794 | 26650865 | 26650794 | ID=MS.gene053443.t1.exon3;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26650794 | 26650865 | 26650794 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26651012 | 26651074 | 26651012 | ID=MS.gene053443.t1.exon4;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26651012 | 26651074 | 26651012 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26651295 | 26651381 | 26651295 | ID=MS.gene053443.t1.exon5;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26651295 | 26651381 | 26651295 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26653606 | 26653753 | 26653606 | ID=MS.gene053443.t1.exon6;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26653606 | 26653753 | 26653606 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26653928 | 26654049 | 26653928 | ID=MS.gene053443.t1.exon7;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26653928 | 26654049 | 26653928 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26654214 | 26654330 | 26654214 | ID=MS.gene053443.t1.exon8;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26654214 | 26654330 | 26654214 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26654518 | 26654613 | 26654518 | ID=MS.gene053443.t1.exon9;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26654518 | 26654613 | 26654518 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26654693 | 26654752 | 26654693 | ID=MS.gene053443.t1.exon10;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26654693 | 26654752 | 26654693 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26655172 | 26655246 | 26655172 | ID=MS.gene053443.t1.exon11;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26655172 | 26655246 | 26655172 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26656909 | 26657013 | 26656909 | ID=MS.gene053443.t1.exon12;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26656909 | 26657013 | 26656909 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26657245 | 26657355 | 26657245 | ID=MS.gene053443.t1.exon13;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26657245 | 26657355 | 26657245 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26657450 | 26657527 | 26657450 | ID=MS.gene053443.t1.exon14;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26657450 | 26657527 | 26657450 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26657642 | 26657738 | 26657642 | ID=MS.gene053443.t1.exon15;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26657642 | 26657738 | 26657642 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26657837 | 26657888 | 26657837 | ID=MS.gene053443.t1.exon16;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26657837 | 26657888 | 26657837 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26658302 | 26658372 | 26658302 | ID=MS.gene053443.t1.exon17;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26658302 | 26658372 | 26658302 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
chr1.3 | exon | 26658488 | 26658603 | 26658488 | ID=MS.gene053443.t1.exon18;Parent=MS.gene053443.t1 |
chr1.3 | CDS | 26658488 | 26658603 | 26658488 | ID=cds.MS.gene053443.t1;Parent=MS.gene053443.t1 |
Gene Sequence |
Protein sequence |