Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007994.t1 | XP_003601002.1 | 96.7 | 780 | 26 | 0 | 1 | 780 | 1 | 780 | 0.00E+00 | 1394.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007994.t1 | Q8RWG3 | 76.2 | 584 | 138 | 1 | 138 | 720 | 129 | 712 | 2.7e-263 | 909.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007994.t1 | G7J2E8 | 96.7 | 780 | 26 | 0 | 1 | 780 | 1 | 780 | 0.0e+00 | 1394.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007994 | MS.gene031914 | PPI |
| MS.gene87666 | MS.gene007994 | PPI |
| MS.gene039996 | MS.gene007994 | PPI |
| MS.gene007994 | MS.gene039995 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007994.t1 | MTR_3g071970 | 97.436 | 780 | 20 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1575 |
| MS.gene007994.t1 | MTR_0013s0150 | 37.288 | 295 | 168 | 6 | 427 | 716 | 95 | 377 | 2.01e-55 | 195 |
| MS.gene007994.t1 | MTR_3g033620 | 35.315 | 286 | 170 | 5 | 434 | 716 | 114 | 387 | 6.74e-49 | 177 |
| MS.gene007994.t1 | MTR_4g077000 | 34.828 | 290 | 176 | 5 | 430 | 716 | 109 | 388 | 1.94e-48 | 176 |
| MS.gene007994.t1 | MTR_7g064130 | 27.897 | 233 | 161 | 3 | 485 | 716 | 222 | 448 | 4.51e-24 | 106 |
| MS.gene007994.t1 | MTR_2g084605 | 29.010 | 293 | 184 | 8 | 434 | 716 | 114 | 392 | 1.52e-21 | 98.2 |
| MS.gene007994.t1 | MTR_7g074070 | 29.461 | 241 | 139 | 7 | 482 | 716 | 103 | 318 | 1.51e-17 | 85.5 |
| MS.gene007994.t1 | MTR_2g081000 | 27.888 | 251 | 160 | 6 | 426 | 670 | 173 | 408 | 1.14e-16 | 84.3 |
| MS.gene007994.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 93 | 315 | 3.01e-16 | 81.3 |
| MS.gene007994.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 93 | 315 | 1.56e-15 | 79.7 |
| MS.gene007994.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 111 | 333 | 2.46e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007994.t1 | AT2G40400 | 68.981 | 648 | 172 | 3 | 134 | 780 | 116 | 735 | 0.0 | 950 |
| MS.gene007994.t1 | AT2G40400 | 68.981 | 648 | 172 | 3 | 134 | 780 | 116 | 735 | 0.0 | 950 |
| MS.gene007994.t1 | AT3G56140 | 73.892 | 609 | 158 | 1 | 134 | 741 | 125 | 733 | 0.0 | 943 |
| MS.gene007994.t1 | AT3G56140 | 73.892 | 609 | 158 | 1 | 134 | 741 | 125 | 733 | 0.0 | 943 |
| MS.gene007994.t1 | AT2G40400 | 74.206 | 535 | 137 | 1 | 134 | 667 | 116 | 650 | 0.0 | 863 |
| MS.gene007994.t1 | AT3G56140 | 73.735 | 514 | 134 | 1 | 229 | 741 | 1 | 514 | 0.0 | 788 |
| MS.gene007994.t1 | AT5G12470 | 35.739 | 291 | 178 | 5 | 427 | 716 | 101 | 383 | 1.11e-51 | 185 |
| MS.gene007994.t1 | AT2G37860 | 26.897 | 290 | 194 | 7 | 434 | 716 | 154 | 432 | 2.89e-25 | 110 |
| MS.gene007994.t1 | AT2G37860 | 26.897 | 290 | 194 | 7 | 434 | 716 | 154 | 432 | 2.89e-25 | 110 |
| MS.gene007994.t1 | AT5G22790 | 27.778 | 288 | 195 | 7 | 434 | 716 | 154 | 433 | 6.15e-25 | 108 |
| MS.gene007994.t1 | AT3G08630 | 29.237 | 236 | 146 | 8 | 483 | 716 | 103 | 319 | 3.07e-21 | 96.3 |
| MS.gene007994.t1 | AT3G08640 | 27.600 | 250 | 160 | 7 | 483 | 729 | 106 | 337 | 1.22e-20 | 94.4 |
| MS.gene007994.t1 | AT5G24690 | 27.099 | 262 | 167 | 6 | 426 | 680 | 172 | 416 | 1.15e-17 | 87.4 |
| MS.gene007994.t1 | AT2G37860 | 23.858 | 197 | 146 | 2 | 434 | 629 | 154 | 347 | 5.65e-13 | 71.6 |
| MS.gene007994.t1 | AT2G37860 | 23.858 | 197 | 146 | 2 | 434 | 629 | 154 | 347 | 5.65e-13 | 71.6 |
Find 200 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCGAATGAACTGTCTTTC+TGG | 0.097992 | 3.3:-62546649 | None:intergenic |
| TCTTCTTGATACAGGGTTTC+AGG | 0.152745 | 3.3:+62547701 | MS.gene007994:intron |
| AATGCTAGAGTTGTTTATTT+AGG | 0.154263 | 3.3:+62544822 | MS.gene007994:CDS |
| CGAATTGCATCAGTTGTATT+TGG | 0.192343 | 3.3:+62548048 | MS.gene007994:CDS |
| ATGCTAGAGTTGTTTATTTA+GGG | 0.270078 | 3.3:+62544823 | MS.gene007994:CDS |
| CATAAGATTGCAGCTTGATT+TGG | 0.278656 | 3.3:-62550472 | None:intergenic |
| CCGAATCTGTCGTTTCCTTT+TGG | 0.296078 | 3.3:+62546412 | MS.gene007994:CDS |
| GCCGGTTCAGGCTTCATATC+AGG | 0.318344 | 3.3:+62546349 | MS.gene007994:CDS |
| CATAAGATAGCAGCTTGATT+TGG | 0.319979 | 3.3:-62550388 | None:intergenic |
| CTTCAAAAGGGAATTGATCT+TGG | 0.320765 | 3.3:+62547522 | MS.gene007994:CDS |
| CACGGACAATCAATTCTTAC+TGG | 0.323981 | 3.3:+62549165 | MS.gene007994:CDS |
| TTTCTCATCAACAGATCTTA+AGG | 0.326958 | 3.3:+62546263 | MS.gene007994:intron |
| GCATATTTACAAGAAATGTT+TGG | 0.329508 | 3.3:-62549130 | None:intergenic |
| AGAACCCAGTGGGGACAAAT+TGG | 0.330231 | 3.3:+62548013 | MS.gene007994:CDS |
| ATCTGCAAATCTCCGTTATC+AGG | 0.331816 | 3.3:+62548242 | MS.gene007994:CDS |
| AGTTCTCTAATAGGACTTCT+TGG | 0.338841 | 3.3:+62547964 | MS.gene007994:CDS |
| AGAACTCACTCACCGTTTCC+AGG | 0.340540 | 3.3:+62547605 | MS.gene007994:CDS |
| TTAACAATCGTTGCTTCAAC+TGG | 0.344183 | 3.3:-62544678 | None:intergenic |
| CGGCGGTGGAAGATGAGTTT+TGG | 0.344399 | 3.3:-62544412 | None:intergenic |
| GAGGTTGACACGGCGGCGTT+TGG | 0.363665 | 3.3:-62544463 | None:intergenic |
| CATATTTACAAGAAATGTTT+GGG | 0.367643 | 3.3:-62549129 | None:intergenic |
| AGGGGAAGCTGAACAAGTTC+CGG | 0.369299 | 3.3:+62544842 | MS.gene007994:CDS |
| ATTAGAGAACTAATGTTATC+AGG | 0.372366 | 3.3:-62547952 | None:intergenic |
| GGAACCACTTAATCAGTATA+TGG | 0.373160 | 3.3:+62544977 | MS.gene007994:CDS |
| GTTGGATTTATTTCAAGTAT+TGG | 0.378068 | 3.3:+62548090 | MS.gene007994:CDS |
| GACGACAAGGGCAGCGGAGG+AGG | 0.378501 | 3.3:+62544632 | MS.gene007994:CDS |
| ACATATGGAGCTAGAGGAAC+TGG | 0.381829 | 3.3:+62546565 | MS.gene007994:CDS |
| TATGCACCTCCAGCCGGTTC+AGG | 0.382397 | 3.3:+62546337 | MS.gene007994:CDS |
| TTTGTTATGCAGATAATTGC+TGG | 0.390425 | 3.3:+62549071 | MS.gene007994:intron |
| GATAACATTAGTTCTCTAAT+AGG | 0.396181 | 3.3:+62547955 | MS.gene007994:CDS |
| ATCTTACAAAATATGCTTGA+TGG | 0.396790 | 3.3:+62546496 | MS.gene007994:CDS |
| TGTTGATAAGCGTTTATCAT+TGG | 0.397184 | 3.3:+62544926 | MS.gene007994:CDS |
| TGCTAGTCTCTGCAAGAACT+TGG | 0.397842 | 3.3:-62547743 | None:intergenic |
| GCTCGGGTTATGAATGCTGC+TGG | 0.402906 | 3.3:+62546757 | MS.gene007994:CDS |
| TGTTTGTTAGTGATGATTGC+TGG | 0.407690 | 3.3:-62548162 | None:intergenic |
| TTCTCTCTGCGGCGACGACA+AGG | 0.409234 | 3.3:+62544619 | MS.gene007994:CDS |
| TGAAGCAACGATTGTTAAAC+CGG | 0.416130 | 3.3:+62544683 | MS.gene007994:CDS |
| ATGCGTTGTATAAGACTTCA+AGG | 0.418219 | 3.3:-62545573 | None:intergenic |
| CAACCGGCGAGGAGTGTTGA+TGG | 0.420911 | 3.3:+62544566 | MS.gene007994:CDS |
| GTTTGGCGGCGCGGAATTGT+CGG | 0.421526 | 3.3:-62544446 | None:intergenic |
| TTGGCTTCAGGATCTTCAAA+AGG | 0.426441 | 3.3:+62547509 | MS.gene007994:intron |
| TGCGAATGAACTGTCTTTCT+GGG | 0.426589 | 3.3:-62546648 | None:intergenic |
| AGAGCTGGACTATGTTATTA+CGG | 0.427535 | 3.3:+62547837 | MS.gene007994:CDS |
| AGATATGAGCTTGGACCAAA+AGG | 0.431226 | 3.3:-62546427 | None:intergenic |
| AGATTCCAATTTGTCCCCAC+TGG | 0.431706 | 3.3:-62548018 | None:intergenic |
| TCATACTCCTGCCATCGTTC+AGG | 0.432726 | 3.3:-62545602 | None:intergenic |
| TCACGACAGTAACTAAGAAT+AGG | 0.433080 | 3.3:-62545626 | None:intergenic |
| GCAATTTCTGCTACATGGTC+TGG | 0.436437 | 3.3:-62546716 | None:intergenic |
| TTGACCGGGTTGAGATTGCT+CGG | 0.437015 | 3.3:+62546740 | MS.gene007994:CDS |
| AGAAAACTTCTTTCAAGAGC+TGG | 0.438716 | 3.3:+62547822 | MS.gene007994:CDS |
| GGTTCGAGATGATAAAGAAT+TGG | 0.438882 | 3.3:+62544863 | MS.gene007994:CDS |
| TTATCCATATACTGATTAAG+TGG | 0.439194 | 3.3:-62544981 | None:intergenic |
| GAGAAAGAAGCCTGAGCATT+GGG | 0.440199 | 3.3:-62544330 | None:intergenic |
| GTTGTTTCCGTCGTGGTGTT+CGG | 0.441955 | 3.3:-62544508 | None:intergenic |
| TCTATCTTCTTCACTTCCTC+CGG | 0.445590 | 3.3:-62544702 | None:intergenic |
| GTTGACACGGCGGCGTTTGG+CGG | 0.450660 | 3.3:-62544460 | None:intergenic |
| CTTAGTTACTGTCGTGAAAA+CGG | 0.452155 | 3.3:+62545632 | MS.gene007994:CDS |
| GGTCTAAAACTCGCTGGGGT+TGG | 0.452644 | 3.3:+62548072 | MS.gene007994:CDS |
| GCCCACTAATTCCTTCTGCC+TGG | 0.453363 | 3.3:-62546291 | None:intergenic |
| GTTCTTCAGCACGAAGCAAC+CGG | 0.455795 | 3.3:+62544550 | MS.gene007994:CDS |
| GCCTGATATGAAGCCTGAAC+CGG | 0.457500 | 3.3:-62546350 | None:intergenic |
| TTTGGTGGTCTAAAACTCGC+TGG | 0.457995 | 3.3:+62548066 | MS.gene007994:CDS |
| CTTCTTGATACAGGGTTTCA+GGG | 0.463114 | 3.3:+62547702 | MS.gene007994:intron |
| AGCGGAGGAGGAGAATATAA+AGG | 0.463909 | 3.3:+62544644 | MS.gene007994:CDS |
| GCTCAGGCTTCTTTCTCCAC+AGG | 0.465749 | 3.3:+62544336 | MS.gene007994:CDS |
| GAAGCTCCGGCGGCTAGAAA+CGG | 0.466543 | 3.3:-62544591 | None:intergenic |
| GGAAAGAGAAAGGGAAAGTG+TGG | 0.466655 | 3.3:+62544787 | MS.gene007994:CDS |
| TACGGCGATAGGTGAACCTT+TGG | 0.473278 | 3.3:+62544758 | MS.gene007994:CDS |
| GCAGATAATTGCTGGGGTTG+TGG | 0.473980 | 3.3:+62549079 | MS.gene007994:intron |
| GGTGCAAGCCATGTCACATA+TGG | 0.477383 | 3.3:+62546550 | MS.gene007994:CDS |
| CCAAAAGGAAACGACAGATT+CGG | 0.483422 | 3.3:-62546412 | None:intergenic |
| TTGGTGGTCTAAAACTCGCT+GGG | 0.483477 | 3.3:+62548067 | MS.gene007994:CDS |
| TAGGTGAACCTTTGGCGATA+GGG | 0.483781 | 3.3:+62544766 | MS.gene007994:CDS |
| ATTGACCTTGCACGCTCTAC+CGG | 0.484254 | 3.3:+62550316 | MS.gene007994:CDS |
| TTCTCTTTCCCTATCGCCAA+AGG | 0.486815 | 3.3:-62544774 | None:intergenic |
| ATTGCATCAGTTGTATTTGG+TGG | 0.489742 | 3.3:+62548051 | MS.gene007994:CDS |
| GTAGCAGAAATTGCTTTGAC+CGG | 0.490120 | 3.3:+62546725 | MS.gene007994:CDS |
| TGGCTTCAGGATCTTCAAAA+GGG | 0.490844 | 3.3:+62547510 | MS.gene007994:intron |
| TTGTTATGCAGATAATTGCT+GGG | 0.493083 | 3.3:+62549072 | MS.gene007994:intron |
| GGAGAATATAAAGGAGAATA+CGG | 0.495999 | 3.3:+62544653 | MS.gene007994:CDS |
| GATTCCAATTTGTCCCCACT+GGG | 0.496606 | 3.3:-62548017 | None:intergenic |
| TGATCTTGGTTTAGTATCAC+CGG | 0.498342 | 3.3:+62547536 | MS.gene007994:CDS |
| AATTCTTTATCATCTCGAAC+CGG | 0.500639 | 3.3:-62544861 | None:intergenic |
| GGGTTTCAGGGAAAGATTGT+TGG | 0.502306 | 3.3:+62547714 | MS.gene007994:intron |
| TGCGGCGACGACAAGGGCAG+CGG | 0.502380 | 3.3:+62544626 | MS.gene007994:CDS |
| AATACAAATTTACCTGGAAA+CGG | 0.504032 | 3.3:-62547617 | None:intergenic |
| GTCCAGGCAGAAGGAATTAG+TGG | 0.505797 | 3.3:+62546289 | MS.gene007994:CDS |
| ATGCTTGATGGAGGGGCCAC+CGG | 0.507280 | 3.3:+62546508 | MS.gene007994:CDS |
| ATGGCGCCGTTTCTAGCCGC+CGG | 0.507479 | 3.3:+62544585 | MS.gene007994:CDS |
| CTCTAGCTCCATATGTGACA+TGG | 0.508607 | 3.3:-62546558 | None:intergenic |
| ACAAAATATGCTTGATGGAG+GGG | 0.508686 | 3.3:+62546501 | MS.gene007994:CDS |
| TTGAAATGCATTGTCAGGGA+TGG | 0.509174 | 3.3:-62547989 | None:intergenic |
| GAAAGTAAGTCACGTGCGGC+GGG | 0.513194 | 3.3:-62544359 | None:intergenic |
| TTGGCGATAGGGAAAGAGAA+AGG | 0.514879 | 3.3:+62544777 | MS.gene007994:CDS |
| ACGGACAATCAATTCTTACT+GGG | 0.519712 | 3.3:+62549166 | MS.gene007994:CDS |
| AGGAATGATAAAGTTGGTGC+AGG | 0.519719 | 3.3:-62547904 | None:intergenic |
| GAATCTGATGTAGGTGGCTC+AGG | 0.521983 | 3.3:-62550364 | None:intergenic |
| TCAAAGCAATTTCTGCTACA+TGG | 0.525380 | 3.3:-62546721 | None:intergenic |
| CACGGCGGCGTTTGGCGGCG+CGG | 0.526669 | 3.3:-62544455 | None:intergenic |
| GTTCTCTAAATACCTGATAA+CGG | 0.527581 | 3.3:-62548254 | None:intergenic |
| GGAGAAAGAAGCCTGAGCAT+TGG | 0.530325 | 3.3:-62544331 | None:intergenic |
| ATAGGTGAACCTTTGGCGAT+AGG | 0.532642 | 3.3:+62544765 | MS.gene007994:CDS |
| GAATCTGATGAAGGTGGCTC+AGG | 0.534682 | 3.3:-62550448 | None:intergenic |
| TAGGAAAGGAATGATAAAGT+TGG | 0.537940 | 3.3:-62547910 | None:intergenic |
| AGACAGTTCATTCGCAGTGA+GGG | 0.538476 | 3.3:+62546655 | MS.gene007994:CDS |
| GACTGTCATGGCAGGATGGA+TGG | 0.539731 | 3.3:+62545545 | MS.gene007994:intron |
| TTGGCCGCCTGAACGATGGC+AGG | 0.541105 | 3.3:+62545595 | MS.gene007994:CDS |
| ATATACGATGCTACGGCGAT+AGG | 0.545909 | 3.3:+62544747 | MS.gene007994:CDS |
| TTGCTGGGGTTGTGGAGCAT+CGG | 0.546344 | 3.3:+62549087 | MS.gene007994:CDS |
| GGAAGGTACGGCACGTGAGA+CGG | 0.547035 | 3.3:-62544391 | None:intergenic |
| CGCATTGGCCGCCTGAACGA+TGG | 0.549145 | 3.3:+62545591 | MS.gene007994:CDS |
| TGAAGGTGGCTCAGGTGACT+CGG | 0.549801 | 3.3:-62550440 | None:intergenic |
| TCTTAGCTGTGTTGATGGAG+AGG | 0.549896 | 3.3:-62544482 | None:intergenic |
| TGAATGCTGCTGGGCAGAGA+CGG | 0.550691 | 3.3:+62546767 | MS.gene007994:CDS |
| TTAAGGACTGTCCAGGCAGA+AGG | 0.552482 | 3.3:+62546280 | MS.gene007994:CDS |
| GAATGCTGCTGGGCAGAGAC+GGG | 0.554415 | 3.3:+62546768 | MS.gene007994:CDS |
| GAGACGGGATGCCCTCCCAC+AGG | 0.554747 | 3.3:+62546783 | MS.gene007994:CDS |
| TCTCTCTGCGGCGACGACAA+GGG | 0.556290 | 3.3:+62544620 | MS.gene007994:CDS |
| TGTAGGTGGCTCAGGTGACT+CGG | 0.556660 | 3.3:-62550356 | None:intergenic |
| ACAGATCTTAAGGACTGTCC+AGG | 0.556803 | 3.3:+62546273 | MS.gene007994:intron |
| AAATTATATGCACCTCCAGC+CGG | 0.558669 | 3.3:+62546331 | MS.gene007994:CDS |
| AGTCACGTGCGGCGGGCCTG+TGG | 0.560414 | 3.3:-62544352 | None:intergenic |
| CAGAGACTAGCAATAGAAGA+AGG | 0.560582 | 3.3:+62547754 | MS.gene007994:CDS |
| GGCGACGACAAGGGCAGCGG+AGG | 0.562155 | 3.3:+62544629 | MS.gene007994:CDS |
| TGACCGGGTTGAGATTGCTC+GGG | 0.562769 | 3.3:+62546741 | MS.gene007994:CDS |
| GATGAGATTAAAAGTGAATG+AGG | 0.563793 | 3.3:+62550520 | MS.gene007994:CDS |
| AGAGAGAAGAAATGAAGCTC+CGG | 0.564132 | 3.3:-62544604 | None:intergenic |
| TACAAAATATGCTTGATGGA+GGG | 0.564237 | 3.3:+62546500 | MS.gene007994:CDS |
| CATATGGAGCTAGAGGAACT+GGG | 0.567576 | 3.3:+62546566 | MS.gene007994:CDS |
| GGAATCCGTCTTGTTGCTTG+TGG | 0.568003 | 3.3:+62545653 | MS.gene007994:CDS |
| GAAAGAGAAAGGGAAAGTGT+GGG | 0.568024 | 3.3:+62544788 | MS.gene007994:CDS |
| AAGAAGTTCTGCAATACCTC+CGG | 0.571472 | 3.3:-62547555 | None:intergenic |
| CTCGGGTTATGAATGCTGCT+GGG | 0.571983 | 3.3:+62546758 | MS.gene007994:CDS |
| TTACAAAATATGCTTGATGG+AGG | 0.573219 | 3.3:+62546499 | MS.gene007994:CDS |
| TACTCCTGCCATCGTTCAGG+CGG | 0.574643 | 3.3:-62545599 | None:intergenic |
| AAGCTCATATCTATCTGCAC+AGG | 0.578491 | 3.3:+62546438 | MS.gene007994:CDS |
| TGCTTGTGGTACTCCACTGA+AGG | 0.579264 | 3.3:+62545667 | MS.gene007994:CDS |
| GGTCTTTCTAACTTGCAGTC+CGG | 0.579868 | 3.3:-62550335 | None:intergenic |
| GGTCTTTGTAACTTGCAGTC+CGG | 0.579868 | 3.3:-62550419 | None:intergenic |
| GCAGTCCGGTAGAGCGTGCA+AGG | 0.580957 | 3.3:-62550321 | None:intergenic |
| TAGCAGAAATTGCTTTGACC+GGG | 0.580962 | 3.3:+62546726 | MS.gene007994:CDS |
| AAATTTGAACATACCTTCAG+TGG | 0.581152 | 3.3:-62545680 | None:intergenic |
| TGATTTGGAGAATCTGATGT+AGG | 0.581495 | 3.3:-62550373 | None:intergenic |
| TGGCGATAGGGAAAGAGAAA+GGG | 0.582792 | 3.3:+62544778 | MS.gene007994:CDS |
| GGAGGAAGTGAAGAAGATAG+AGG | 0.583668 | 3.3:+62544704 | MS.gene007994:CDS |
| AGGAATTAGTGGGCTAACAA+AGG | 0.584204 | 3.3:+62546300 | MS.gene007994:CDS |
| GCTAGTCTCTGCAAGAACTT+GGG | 0.585164 | 3.3:-62547742 | None:intergenic |
| TGAAAGTAAGTCACGTGCGG+CGG | 0.586751 | 3.3:-62544360 | None:intergenic |
| TGAAGTCTTATACAACGCAT+TGG | 0.586922 | 3.3:+62545576 | MS.gene007994:CDS |
| TGATTTGGAGAATCTGATGA+AGG | 0.587198 | 3.3:-62550457 | None:intergenic |
| GAACACCACGACGGAAACAA+CGG | 0.587520 | 3.3:+62544510 | MS.gene007994:CDS |
| GCTATCTTATGCAACTCTAC+CGG | 0.590768 | 3.3:+62550400 | MS.gene007994:CDS |
| ATCGAGGATATACGATGCTA+CGG | 0.591448 | 3.3:+62544740 | MS.gene007994:CDS |
| TCTATCTGCACAGGCTAGAG+TGG | 0.591577 | 3.3:+62546447 | MS.gene007994:CDS |
| GATATGAAGCCTGAACCGGC+TGG | 0.591682 | 3.3:-62546346 | None:intergenic |
| TGTGCAGATAGATATGAGCT+TGG | 0.597352 | 3.3:-62546436 | None:intergenic |
| CGCAATTGACTCATCAGCAT+AGG | 0.597542 | 3.3:-62547929 | None:intergenic |
| GCATTTCAAAAGAACCCAGT+GGG | 0.600369 | 3.3:+62548003 | MS.gene007994:CDS |
| TTGACTCATCAGCATAGGAA+AGG | 0.600777 | 3.3:-62547924 | None:intergenic |
| TCACTAACAAACAGATTGCA+AGG | 0.600933 | 3.3:+62548172 | MS.gene007994:CDS |
| CATGTCACATATGGAGCTAG+AGG | 0.602908 | 3.3:+62546559 | MS.gene007994:CDS |
| CAATTCTTACTGGGGAACGC+AGG | 0.606143 | 3.3:+62549175 | MS.gene007994:CDS |
| TTGTTGATTTCTTTACAGTG+TGG | 0.609596 | 3.3:+62547878 | MS.gene007994:CDS |
| TGCTAGAGTTGTTTATTTAG+GGG | 0.610896 | 3.3:+62544824 | MS.gene007994:CDS |
| TGGTGGTCTAAAACTCGCTG+GGG | 0.619487 | 3.3:+62548068 | MS.gene007994:CDS |
| CGACGCCGTTGTTTCCGTCG+TGG | 0.620705 | 3.3:-62544515 | None:intergenic |
| TGGCTAACTAACCTGTGGGA+GGG | 0.627544 | 3.3:-62546794 | None:intergenic |
| GCGCCATCAACACTCCTCGC+CGG | 0.627563 | 3.3:-62544569 | None:intergenic |
| GGAAGTGAAGAAGATAGAGG+AGG | 0.629985 | 3.3:+62544707 | MS.gene007994:CDS |
| ATGGCTAACTAACCTGTGGG+AGG | 0.632628 | 3.3:-62546795 | None:intergenic |
| AGTCACAACTATCAACATAC+CGG | 0.634556 | 3.3:-62546527 | None:intergenic |
| TATTAGCACAGTATCAGAAG+CGG | 0.643218 | 3.3:+62547797 | MS.gene007994:CDS |
| AAGAAAACCGAACACCACGA+CGG | 0.643908 | 3.3:+62544501 | MS.gene007994:CDS |
| TAACCCGAGCAATCTCAACC+CGG | 0.649576 | 3.3:-62546744 | None:intergenic |
| TCCAGGCAGAAGGAATTAGT+GGG | 0.651684 | 3.3:+62546290 | MS.gene007994:CDS |
| AAGACAGTTCATTCGCAGTG+AGG | 0.654448 | 3.3:+62546654 | MS.gene007994:CDS |
| GTTATTACGGACACTGTCAG+AGG | 0.660546 | 3.3:+62547850 | MS.gene007994:CDS |
| TGTTATGCAGATAATTGCTG+GGG | 0.662537 | 3.3:+62549073 | MS.gene007994:intron |
| GAGAAGAAATGAAGCTCCGG+CGG | 0.664149 | 3.3:-62544601 | None:intergenic |
| AGCTTCATTTCTTCTCTCTG+CGG | 0.667380 | 3.3:+62544608 | MS.gene007994:CDS |
| GGTATGTTGATAGTTGTGAC+TGG | 0.667974 | 3.3:+62546529 | MS.gene007994:CDS |
| CGGCACGTGAGACGGTTACG+CGG | 0.668728 | 3.3:-62544383 | None:intergenic |
| GAGTACCACAAGCAACAAGA+CGG | 0.670544 | 3.3:-62545658 | None:intergenic |
| AGCAACGATTGTTAAACCGG+AGG | 0.676125 | 3.3:+62544686 | MS.gene007994:CDS |
| TTTGGAGAATCTGATGTAGG+TGG | 0.683114 | 3.3:-62550370 | None:intergenic |
| CGGACAATCAATTCTTACTG+GGG | 0.691240 | 3.3:+62549167 | MS.gene007994:CDS |
| CACAACTATCAACATACCGG+TGG | 0.692061 | 3.3:-62546524 | None:intergenic |
| CGGTGAAAGTAAGTCACGTG+CGG | 0.694390 | 3.3:-62544363 | None:intergenic |
| TGTTGATGGAGAGGTTGACA+CGG | 0.696936 | 3.3:-62544473 | None:intergenic |
| ATATGGAGCTAGAGGAACTG+GGG | 0.700000 | 3.3:+62546567 | MS.gene007994:CDS |
| TCTTGGTTTAGTATCACCGG+AGG | 0.703286 | 3.3:+62547539 | MS.gene007994:CDS |
| ATGAAGCCTGAACCGGCTGG+AGG | 0.705896 | 3.3:-62546343 | None:intergenic |
| TTTGGAGAATCTGATGAAGG+TGG | 0.706792 | 3.3:-62550454 | None:intergenic |
| TGCATTTCAAAAGAACCCAG+TGG | 0.707372 | 3.3:+62548002 | MS.gene007994:CDS |
| ATTTCTGCTACATGGTCTGG+CGG | 0.713546 | 3.3:-62546713 | None:intergenic |
| TCAGCACGAAGCAACCGGCG+AGG | 0.717218 | 3.3:+62544555 | MS.gene007994:CDS |
| TGATGGAGAGGTTGACACGG+CGG | 0.732999 | 3.3:-62544470 | None:intergenic |
| AGGAGGAAGTGATAACATCG+AGG | 0.747187 | 3.3:+62544724 | MS.gene007994:CDS |
| TGAGTGAGTTCTGAAAGCAG+AGG | 0.753513 | 3.3:-62547594 | None:intergenic |
| CATTTCAAAAGAACCCAGTG+GGG | 0.761830 | 3.3:+62548004 | MS.gene007994:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAATCTAATTTTT+TGG | + | chr3.3:62550274-62550293 | MS.gene007994:intron | 10.0% |
| !!! | TTTAGTTTTTTAGTTTTTTT+TGG | + | chr3.3:62545380-62545399 | MS.gene007994:intron | 10.0% |
| !! | AGTTTATGAAAAATAACTTA+TGG | - | chr3.3:62545172-62545191 | None:intergenic | 15.0% |
| !! | ATAACTAATTATCATGATAA+AGG | + | chr3.3:62545063-62545082 | MS.gene007994:intron | 15.0% |
| !! | ATATACAAATTTCTCATTAA+AGG | + | chr3.3:62550008-62550027 | MS.gene007994:intron | 15.0% |
| !! | GGTTATTTAAATTTAATACA+TGG | + | chr3.3:62549751-62549770 | MS.gene007994:intron | 15.0% |
| !!! | TTAAAATTTTAAAATCCTTG+TGG | - | chr3.3:62545884-62545903 | None:intergenic | 15.0% |
| !!! | TTCAATGTTTTAAATTTGTT+GGG | + | chr3.3:62546111-62546130 | MS.gene007994:intron | 15.0% |
| !! | AAAAACCTAATTCATAGATT+AGG | - | chr3.3:62545933-62545952 | None:intergenic | 20.0% |
| !! | AAGTACAACAAATTATACAT+TGG | + | chr3.3:62549628-62549647 | MS.gene007994:intron | 20.0% |
| !! | ACTTAATAAGCACTTAATTA+AGG | - | chr3.3:62545131-62545150 | None:intergenic | 20.0% |
| !! | AGTACAACAAATTATACATT+GGG | + | chr3.3:62549629-62549648 | MS.gene007994:intron | 20.0% |
| !! | ATGAGAAATTTGTATATGAA+AGG | - | chr3.3:62550005-62550024 | None:intergenic | 20.0% |
| !! | CAGAAAAAATAATTCGTAAA+AGG | - | chr3.3:62546966-62546985 | None:intergenic | 20.0% |
| !! | CATATTTACAAGAAATGTTT+GGG | - | chr3.3:62549132-62549151 | None:intergenic | 20.0% |
| !! | CTCTAAGTTAAAATTTAACA+TGG | - | chr3.3:62550034-62550053 | None:intergenic | 20.0% |
| !! | TAAAGGATGATTACATTAAA+GGG | - | chr3.3:62547439-62547458 | None:intergenic | 20.0% |
| !! | TCAAAAAATACAAATTTACC+TGG | - | chr3.3:62547626-62547645 | None:intergenic | 20.0% |
| !! | TTGGATAAACAGTTTATTTA+CGG | - | chr3.3:62545102-62545121 | None:intergenic | 20.0% |
| !!! | AACATGATTATATTTCCTTT+TGG | + | chr3.3:62547490-62547509 | MS.gene007994:intron | 20.0% |
| !!! | AATAAGAGCATAACAAAAAT+CGG | - | chr3.3:62545361-62545380 | None:intergenic | 20.0% |
| !!! | AATTTAAAACATTGAACACA+AGG | - | chr3.3:62546107-62546126 | None:intergenic | 20.0% |
| !!! | AATTTATGTTTCTTTTACCT+TGG | + | chr3.3:62545439-62545458 | MS.gene007994:intron | 20.0% |
| !!! | CTAAGACACTTTTTATTATT+GGG | - | chr3.3:62548712-62548731 | None:intergenic | 20.0% |
| !!! | GCATTTTTCCTTTAAATTAT+TGG | - | chr3.3:62548550-62548569 | None:intergenic | 20.0% |
| !!! | GTTCAATGTTTTAAATTTGT+TGG | + | chr3.3:62546110-62546129 | MS.gene007994:intron | 20.0% |
| !!! | TAGGTTTTTCATAATATTTG+AGG | + | chr3.3:62545944-62545963 | MS.gene007994:intron | 20.0% |
| !!! | TCTAAGACACTTTTTATTAT+TGG | - | chr3.3:62548713-62548732 | None:intergenic | 20.0% |
| !!! | TGCTTACTATTAATTTTTCA+AGG | + | chr3.3:62549893-62549912 | MS.gene007994:intron | 20.0% |
| !!! | TTACGAATTATTTTTTCTGT+AGG | + | chr3.3:62546967-62546986 | MS.gene007994:intron | 20.0% |
| !!! | TTTTTCTTTTCCTTAAATGT+TGG | + | chr3.3:62547130-62547149 | MS.gene007994:intron | 20.0% |
| ! | AAACAGAAACATCAAGTAAA+AGG | - | chr3.3:62547025-62547044 | None:intergenic | 25.0% |
| ! | AAAGACCTAATCTATGAATT+AGG | + | chr3.3:62545925-62545944 | MS.gene007994:intron | 25.0% |
| ! | AAATTACTTACCAAACTTAC+AGG | - | chr3.3:62550149-62550168 | None:intergenic | 25.0% |
| ! | AACTTCAGTATTAATACAGA+AGG | - | chr3.3:62549043-62549062 | None:intergenic | 25.0% |
| ! | AATACAAATTTACCTGGAAA+CGG | - | chr3.3:62547620-62547639 | None:intergenic | 25.0% |
| ! | AATGCTAGAGTTGTTTATTT+AGG | + | chr3.3:62544822-62544841 | MS.gene007994:CDS | 25.0% |
| ! | AATTACGACAATAAAGTTGA+AGG | + | chr3.3:62550107-62550126 | MS.gene007994:intron | 25.0% |
| ! | AATTTGTATATGAAAGGAGA+TGG | - | chr3.3:62549999-62550018 | None:intergenic | 25.0% |
| ! | ACTTGATATCCGAAAATTAT+AGG | - | chr3.3:62549301-62549320 | None:intergenic | 25.0% |
| ! | AGATCAGATAATATGTTGAA+AGG | + | chr3.3:62546044-62546063 | MS.gene007994:intron | 25.0% |
| ! | ATCCTTAAAAAGTGATTTAG+AGG | + | chr3.3:62549836-62549855 | MS.gene007994:intron | 25.0% |
| ! | ATCTTACAAAATATGCTTGA+TGG | + | chr3.3:62546496-62546515 | MS.gene007994:CDS | 25.0% |
| ! | ATGACTCACCAATAATTTAA+AGG | + | chr3.3:62548539-62548558 | MS.gene007994:intron | 25.0% |
| ! | ATGCTAGAGTTGTTTATTTA+GGG | + | chr3.3:62544823-62544842 | MS.gene007994:CDS | 25.0% |
| ! | ATGTGAACTTAATATTGGAA+GGG | + | chr3.3:62549541-62549560 | MS.gene007994:intron | 25.0% |
| ! | ATTAAATATTCCCAACTTCA+GGG | + | chr3.3:62549939-62549958 | MS.gene007994:intron | 25.0% |
| ! | ATTAAGGCAATTGTTAAAGA+AGG | - | chr3.3:62549697-62549716 | None:intergenic | 25.0% |
| ! | ATTACGACAATAAAGTTGAA+GGG | + | chr3.3:62550108-62550127 | MS.gene007994:intron | 25.0% |
| ! | ATTAGAGAACTAATGTTATC+AGG | - | chr3.3:62547955-62547974 | None:intergenic | 25.0% |
| ! | CTAAAGGATGATTACATTAA+AGG | - | chr3.3:62547440-62547459 | None:intergenic | 25.0% |
| ! | CTTGATATCCGAAAATTATA+GGG | - | chr3.3:62549300-62549319 | None:intergenic | 25.0% |
| ! | GATCAGATAATATGTTGAAA+GGG | + | chr3.3:62546045-62546064 | MS.gene007994:intron | 25.0% |
| ! | GCATATTTACAAGAAATGTT+TGG | - | chr3.3:62549133-62549152 | None:intergenic | 25.0% |
| ! | GTACAACAAATTATACATTG+GGG | + | chr3.3:62549630-62549649 | MS.gene007994:intron | 25.0% |
| ! | GTAGTATGTGAACTTAATAT+TGG | + | chr3.3:62549536-62549555 | MS.gene007994:intron | 25.0% |
| ! | GTTAAAGAAGGATTCAAAAA+TGG | - | chr3.3:62549685-62549704 | None:intergenic | 25.0% |
| ! | TAAAAGACGTAAAAGAAGAT+TGG | + | chr3.3:62548308-62548327 | MS.gene007994:intron | 25.0% |
| ! | TATGTGAACTTAATATTGGA+AGG | + | chr3.3:62549540-62549559 | MS.gene007994:intron | 25.0% |
| ! | TCTAGCAATGACAAAAATAT+AGG | - | chr3.3:62545488-62545507 | None:intergenic | 25.0% |
| ! | TTCTTTAACAATTGCCTTAA+TGG | + | chr3.3:62549696-62549715 | MS.gene007994:intron | 25.0% |
| ! | TTGACTTTCCTTTAATTGAA+GGG | - | chr3.3:62550089-62550108 | None:intergenic | 25.0% |
| !! | AATTTTCTTGATATTCTTGC+AGG | - | chr3.3:62546595-62546614 | None:intergenic | 25.0% |
| !! | ATATGCTATCTTTTGTATCA+CGG | + | chr3.3:62549147-62549166 | MS.gene007994:CDS | 25.0% |
| !! | ATCAAGCATATTTTGTAAGA+TGG | - | chr3.3:62546497-62546516 | None:intergenic | 25.0% |
| !! | ATTGACTTTCCTTTAATTGA+AGG | - | chr3.3:62550090-62550109 | None:intergenic | 25.0% |
| !! | CAAAATAATTCTCTCTTTTG+AGG | - | chr3.3:62550185-62550204 | None:intergenic | 25.0% |
| !! | CAATTTTGTATCACCAAAAT+GGG | - | chr3.3:62546906-62546925 | None:intergenic | 25.0% |
| !! | GATAACATTAGTTCTCTAAT+AGG | + | chr3.3:62547955-62547974 | MS.gene007994:CDS | 25.0% |
| !! | GTATCTTTAAAAACTAGTTG+TGG | + | chr3.3:62548507-62548526 | MS.gene007994:intron | 25.0% |
| !! | GTTGGATTTATTTCAAGTAT+TGG | + | chr3.3:62548090-62548109 | MS.gene007994:CDS | 25.0% |
| !! | TCAATTTTGTATCACCAAAA+TGG | - | chr3.3:62546907-62546926 | None:intergenic | 25.0% |
| !! | TGTTTGAACCCTATAATTTT+CGG | + | chr3.3:62549289-62549308 | MS.gene007994:intron | 25.0% |
| !! | TTATCCATATACTGATTAAG+TGG | - | chr3.3:62544984-62545003 | None:intergenic | 25.0% |
| !!! | CAACTAGTTTTTAAAGATAC+AGG | - | chr3.3:62548507-62548526 | None:intergenic | 25.0% |
| !!! | CATTATCTTCTGAAATTTTC+TGG | + | chr3.3:62545735-62545754 | MS.gene007994:intron | 25.0% |
| !!! | GTGAAGATTATTTTTTCACT+TGG | + | chr3.3:62549654-62549673 | MS.gene007994:intron | 25.0% |
| !!! | TACCTCTAAATCACTTTTTA+AGG | - | chr3.3:62549841-62549860 | None:intergenic | 25.0% |
| !!! | TATAGGTTCTAAATTTGACT+AGG | + | chr3.3:62550251-62550270 | MS.gene007994:intron | 25.0% |
| !!! | TTCACCCTTTTGTTTAATTT+GGG | - | chr3.3:62545972-62545991 | None:intergenic | 25.0% |
| !!! | TTTAGTTTTGTGATAGAAAG+AGG | + | chr3.3:62549490-62549509 | MS.gene007994:intron | 25.0% |
| !!! | TTTTACTTGATGTTTCTGTT+TGG | + | chr3.3:62547024-62547043 | MS.gene007994:intron | 25.0% |
| AAATCTGATGATTAGGTAGT+TGG | + | chr3.3:62547367-62547386 | MS.gene007994:intron | 30.0% | |
| AAATTTGAACATACCTTCAG+TGG | - | chr3.3:62545683-62545702 | None:intergenic | 30.0% | |
| AACTATCTTGATGAGCTTAT+TGG | + | chr3.3:62545188-62545207 | MS.gene007994:intron | 30.0% | |
| AAGCTAATAAGTGAACGAAA+TGG | - | chr3.3:62546817-62546836 | None:intergenic | 30.0% | |
| AATACATCAGAAAGAGCTTA+TGG | + | chr3.3:62545211-62545230 | MS.gene007994:intron | 30.0% | |
| AATCTCACTTCCAACATTTA+AGG | - | chr3.3:62547143-62547162 | None:intergenic | 30.0% | |
| AATCTGATGATTAGGTAGTT+GGG | + | chr3.3:62547368-62547387 | MS.gene007994:intron | 30.0% | |
| AATGTAATCATCCTTTAGAC+AGG | + | chr3.3:62547442-62547461 | MS.gene007994:intron | 30.0% | |
| AATTCTTTATCATCTCGAAC+CGG | - | chr3.3:62544864-62544883 | None:intergenic | 30.0% | |
| AGATTAAAGAATAGACCACA+AGG | + | chr3.3:62545866-62545885 | MS.gene007994:intron | 30.0% | |
| AGGTTCCCAAATTAAACAAA+AGG | + | chr3.3:62545964-62545983 | MS.gene007994:intron | 30.0% | |
| ATAAAGGGCTTAAATTTGGA+AGG | - | chr3.3:62546871-62546890 | None:intergenic | 30.0% | |
| ATGCTTACCATTTGAATCTA+TGG | - | chr3.3:62545834-62545853 | None:intergenic | 30.0% | |
| ATTCCATAACAAGATCTCTT+AGG | - | chr3.3:62549583-62549602 | None:intergenic | 30.0% | |
| CAAAATAAACTTGACTGTCA+TGG | + | chr3.3:62545533-62545552 | MS.gene007994:intron | 30.0% | |
| CAATATATGATCTAAGCACT+TGG | + | chr3.3:62547173-62547192 | MS.gene007994:intron | 30.0% | |
| CAATCCAAATTATGCTATCT+TGG | - | chr3.3:62550211-62550230 | None:intergenic | 30.0% | |
| CAGTATATGATTATTGACAC+AGG | + | chr3.3:62548423-62548442 | MS.gene007994:intron | 30.0% | |
| CATTAAATATTCCCAACTTC+AGG | + | chr3.3:62549938-62549957 | MS.gene007994:intron | 30.0% | |
| CGTTCATATGAAAATGTGTA+TGG | + | chr3.3:62549373-62549392 | MS.gene007994:intron | 30.0% | |
| CTGTGTCAATAATCATATAC+TGG | - | chr3.3:62548425-62548444 | None:intergenic | 30.0% | |
| GAAACCAAGATAGCATAATT+TGG | + | chr3.3:62550204-62550223 | MS.gene007994:intron | 30.0% | |
| GCAACCAAAAATTCCAATTT+AGG | + | chr3.3:62549006-62549025 | MS.gene007994:intron | 30.0% | |
| GGAGAATATAAAGGAGAATA+CGG | + | chr3.3:62544653-62544672 | MS.gene007994:CDS | 30.0% | |
| GGTTCCCAAATTAAACAAAA+GGG | + | chr3.3:62545965-62545984 | MS.gene007994:intron | 30.0% | |
| GTAAATGAGTCTCACAAATA+AGG | - | chr3.3:62548662-62548681 | None:intergenic | 30.0% | |
| GTTCTCTAAATACCTGATAA+CGG | - | chr3.3:62548257-62548276 | None:intergenic | 30.0% | |
| TAAAGGGCTTAAATTTGGAA+GGG | - | chr3.3:62546870-62546889 | None:intergenic | 30.0% | |
| TAACAGTATTGTAAGTTGCA+AGG | - | chr3.3:62548822-62548841 | None:intergenic | 30.0% | |
| TAACTAATGTCCTGTAAGTT+TGG | + | chr3.3:62550136-62550155 | MS.gene007994:intron | 30.0% | |
| TACAAAATATGCTTGATGGA+GGG | + | chr3.3:62546500-62546519 | MS.gene007994:CDS | 30.0% | |
| TACTTGAATGTGTTTGAGAA+AGG | - | chr3.3:62545260-62545279 | None:intergenic | 30.0% | |
| TAGGAAAGGAATGATAAAGT+TGG | - | chr3.3:62547913-62547932 | None:intergenic | 30.0% | |
| TATATGAAAGGAGATGGTAT+TGG | - | chr3.3:62549993-62550012 | None:intergenic | 30.0% | |
| TCATATGAAAATGTGTATGG+TGG | + | chr3.3:62549376-62549395 | MS.gene007994:intron | 30.0% | |
| TGACTTTCCTTTAATTGAAG+GGG | - | chr3.3:62550088-62550107 | None:intergenic | 30.0% | |
| TGAGATTATTTCATCACTCT+CGG | + | chr3.3:62547672-62547691 | MS.gene007994:intron | 30.0% | |
| TGCTAGAGTTGTTTATTTAG+GGG | + | chr3.3:62544824-62544843 | MS.gene007994:CDS | 30.0% | |
| TTAATCATTCATCTGCGTAT+AGG | + | chr3.3:62550234-62550253 | MS.gene007994:intron | 30.0% | |
| TTACAAAATATGCTTGATGG+AGG | + | chr3.3:62546499-62546518 | MS.gene007994:CDS | 30.0% | |
| TTATAGGGTTCAAACACAAT+CGG | - | chr3.3:62549285-62549304 | None:intergenic | 30.0% | |
| TTCTGTAGGCAATATAACTT+TGG | + | chr3.3:62546981-62547000 | MS.gene007994:intron | 30.0% | |
| TTGTTATGCAGATAATTGCT+GGG | + | chr3.3:62549072-62549091 | MS.gene007994:intron | 30.0% | |
| TTTATCTTCGGTTTCAACAT+AGG | + | chr3.3:62549730-62549749 | MS.gene007994:intron | 30.0% | |
| TTTCTCATCAACAGATCTTA+AGG | + | chr3.3:62546263-62546282 | MS.gene007994:intron | 30.0% | |
| ! | AGTAGATGCTCTAAGTTAAA+AGG | - | chr3.3:62550065-62550084 | None:intergenic | 30.0% |
| ! | CACTTGGACTTTAAACTTTT+GGG | + | chr3.3:62547189-62547208 | MS.gene007994:intron | 30.0% |
| ! | CAGACCTAAATTGGAATTTT+TGG | - | chr3.3:62549013-62549032 | None:intergenic | 30.0% |
| ! | CAGTGGTAACTAGTTTAAAT+TGG | + | chr3.3:62547339-62547358 | MS.gene007994:intron | 30.0% |
| ! | CATATTTTGTAAGATGGTCT+GGG | - | chr3.3:62546491-62546510 | None:intergenic | 30.0% |
| ! | TGTTGATAAGCGTTTATCAT+TGG | + | chr3.3:62544926-62544945 | MS.gene007994:CDS | 30.0% |
| ! | TTTGTTATGCAGATAATTGC+TGG | + | chr3.3:62549071-62549090 | MS.gene007994:intron | 30.0% |
| !! | ACATTGATTCCAAGTGTTTA+GGG | + | chr3.3:62547297-62547316 | MS.gene007994:intron | 30.0% |
| !! | GTTCACCCTTTTGTTTAATT+TGG | - | chr3.3:62545973-62545992 | None:intergenic | 30.0% |
| !! | TACATTGATTCCAAGTGTTT+AGG | + | chr3.3:62547296-62547315 | MS.gene007994:intron | 30.0% |
| !! | TTGTTGATTTCTTTACAGTG+TGG | + | chr3.3:62547878-62547897 | MS.gene007994:CDS | 30.0% |
| !!! | GTTGTTTATGCACTTTTTCT+TGG | + | chr3.3:62548216-62548235 | MS.gene007994:CDS | 30.0% |
| !!! | TATCTTCTGAAATTTTCTGG+TGG | + | chr3.3:62545738-62545757 | MS.gene007994:intron | 30.0% |
| !!! | TCTTTTGAAATGCATTGTCA+GGG | - | chr3.3:62547996-62548015 | None:intergenic | 30.0% |
| !!! | TTATATTTCCTTTTGGCTTC+AGG | + | chr3.3:62547497-62547516 | MS.gene007994:intron | 30.0% |
| !!! | TTCTTTTGAAATGCATTGTC+AGG | - | chr3.3:62547997-62548016 | None:intergenic | 30.0% |
| AAAGAGGAGAAATTCACTTC+TGG | + | chr3.3:62549506-62549525 | MS.gene007994:intron | 35.0% | |
| AAAGGGCTTAAATTTGGAAG+GGG | - | chr3.3:62546869-62546888 | None:intergenic | 35.0% | |
| AATTATACCCCCTAAACACT+TGG | - | chr3.3:62547309-62547328 | None:intergenic | 35.0% | |
| ACAAAATATGCTTGATGGAG+GGG | + | chr3.3:62546501-62546520 | MS.gene007994:CDS | 35.0% | |
| ACAGGACAAAGTTTGCAATT+TGG | + | chr3.3:62548441-62548460 | MS.gene007994:intron | 35.0% | |
| ACGGACAATCAATTCTTACT+GGG | + | chr3.3:62549166-62549185 | MS.gene007994:CDS | 35.0% | |
| AGAAAACTTCTTTCAAGAGC+TGG | + | chr3.3:62547822-62547841 | MS.gene007994:CDS | 35.0% | |
| AGAGCTGGACTATGTTATTA+CGG | + | chr3.3:62547837-62547856 | MS.gene007994:CDS | 35.0% | |
| AGATTCAAATGGTAAGCATG+TGG | + | chr3.3:62545835-62545854 | MS.gene007994:intron | 35.0% | |
| AGTCACAACTATCAACATAC+CGG | - | chr3.3:62546530-62546549 | None:intergenic | 35.0% | |
| AGTTCTCTAATAGGACTTCT+TGG | + | chr3.3:62547964-62547983 | MS.gene007994:CDS | 35.0% | |
| ATCTACTCCCCTTCAATTAA+AGG | + | chr3.3:62550078-62550097 | MS.gene007994:intron | 35.0% | |
| ATCTTTGTGTGACTTGATCT+AGG | - | chr3.3:62546223-62546242 | None:intergenic | 35.0% | |
| ATGCGTTGTATAAGACTTCA+AGG | - | chr3.3:62545576-62545595 | None:intergenic | 35.0% | |
| ATTGCATCAGTTGTATTTGG+TGG | + | chr3.3:62548051-62548070 | MS.gene007994:CDS | 35.0% | |
| CACTTAATTAAGGCTCTTGT+TGG | - | chr3.3:62545121-62545140 | None:intergenic | 35.0% | |
| CATAAGATAGCAGCTTGATT+TGG | - | chr3.3:62550391-62550410 | None:intergenic | 35.0% | |
| CATAAGATTGCAGCTTGATT+TGG | - | chr3.3:62550475-62550494 | None:intergenic | 35.0% | |
| CGAATTGCATCAGTTGTATT+TGG | + | chr3.3:62548048-62548067 | MS.gene007994:CDS | 35.0% | |
| CTTAGTTACTGTCGTGAAAA+CGG | + | chr3.3:62545632-62545651 | MS.gene007994:CDS | 35.0% | |
| CTTCAAAAGGGAATTGATCT+TGG | + | chr3.3:62547522-62547541 | MS.gene007994:CDS | 35.0% | |
| GCACATAAAGGGCTTAAATT+TGG | - | chr3.3:62546875-62546894 | None:intergenic | 35.0% | |
| GGAACCACTTAATCAGTATA+TGG | + | chr3.3:62544977-62544996 | MS.gene007994:CDS | 35.0% | |
| GGTTCGAGATGATAAAGAAT+TGG | + | chr3.3:62544863-62544882 | MS.gene007994:CDS | 35.0% | |
| GGTTGCAAAATCTGATGATT+AGG | + | chr3.3:62547360-62547379 | MS.gene007994:intron | 35.0% | |
| GTATGTTGACATTTGAAAGC+AGG | + | chr3.3:62548472-62548491 | MS.gene007994:intron | 35.0% | |
| GTCTGCTGTGTAATTATTTG+AGG | + | chr3.3:62548908-62548927 | MS.gene007994:intron | 35.0% | |
| GTGCAGATGAAGAAATAGAA+AGG | - | chr3.3:62548885-62548904 | None:intergenic | 35.0% | |
| TAATCATCCTTTAGACAGGA+TGG | + | chr3.3:62547446-62547465 | MS.gene007994:intron | 35.0% | |
| TACCACAAAAAATCAGCAAC+AGG | - | chr3.3:62546688-62546707 | None:intergenic | 35.0% | |
| TATGTTGAAAGGGTGAATGA+TGG | + | chr3.3:62546055-62546074 | MS.gene007994:intron | 35.0% | |
| TATTAGCACAGTATCAGAAG+CGG | + | chr3.3:62547797-62547816 | MS.gene007994:CDS | 35.0% | |
| TCAAAGCAATTTCTGCTACA+TGG | - | chr3.3:62546724-62546743 | None:intergenic | 35.0% | |
| TCACGACAGTAACTAAGAAT+AGG | - | chr3.3:62545629-62545648 | None:intergenic | 35.0% | |
| TCACTAACAAACAGATTGCA+AGG | + | chr3.3:62548172-62548191 | MS.gene007994:CDS | 35.0% | |
| TGAACGCTTGATTGTGAAAT+TGG | - | chr3.3:62549359-62549378 | None:intergenic | 35.0% | |
| TGAAGCAACGATTGTTAAAC+CGG | + | chr3.3:62544683-62544702 | MS.gene007994:CDS | 35.0% | |
| TGAATGATGGCAAGAGAATT+AGG | + | chr3.3:62546068-62546087 | MS.gene007994:intron | 35.0% | |
| TGATCTTGGTTTAGTATCAC+CGG | + | chr3.3:62547536-62547555 | MS.gene007994:CDS | 35.0% | |
| TGGGTCTCACTAAATTATGA+GGG | + | chr3.3:62548629-62548648 | MS.gene007994:intron | 35.0% | |
| TGGTGAAATGTTAATTGACG+TGG | + | chr3.3:62547044-62547063 | MS.gene007994:intron | 35.0% | |
| TGTGAGACTCATTTACAAAG+TGG | + | chr3.3:62548666-62548685 | MS.gene007994:intron | 35.0% | |
| TGTTATGCAGATAATTGCTG+GGG | + | chr3.3:62549073-62549092 | MS.gene007994:intron | 35.0% | |
| TTAACAATCGTTGCTTCAAC+TGG | - | chr3.3:62544681-62544700 | None:intergenic | 35.0% | |
| TTGGGTCTCACTAAATTATG+AGG | + | chr3.3:62548628-62548647 | MS.gene007994:intron | 35.0% | |
| ! | AATTGTCGGAGTTTTTCGTT+CGG | - | chr3.3:62544435-62544454 | None:intergenic | 35.0% |
| ! | ACTTTTAATCTCATCGATGC+TGG | - | chr3.3:62550515-62550534 | None:intergenic | 35.0% |
| ! | ATTGATTCCAAGTGTTTAGG+GGG | + | chr3.3:62547299-62547318 | MS.gene007994:intron | 35.0% |
| ! | CAAAAGGGTGAACATGATTT+TGG | + | chr3.3:62545980-62545999 | MS.gene007994:intron | 35.0% |
| ! | GAAACTTGCTTTATGCAGTA+TGG | + | chr3.3:62546002-62546021 | MS.gene007994:intron | 35.0% |
| ! | GCACTTGGACTTTAAACTTT+TGG | + | chr3.3:62547188-62547207 | MS.gene007994:intron | 35.0% |
| ! | GCATATTTTGTAAGATGGTC+TGG | - | chr3.3:62546492-62546511 | None:intergenic | 35.0% |
| ! | TGAAGTCTTATACAACGCAT+TGG | + | chr3.3:62545576-62545595 | MS.gene007994:CDS | 35.0% |
| ! | TGACTTGCCATAGATTCAAA+TGG | + | chr3.3:62545824-62545843 | MS.gene007994:intron | 35.0% |
| ! | TGATTTGGAGAATCTGATGA+AGG | - | chr3.3:62550460-62550479 | None:intergenic | 35.0% |
| ! | TGATTTGGAGAATCTGATGT+AGG | - | chr3.3:62550376-62550395 | None:intergenic | 35.0% |
| ! | TGTTTGTTAGTGATGATTGC+TGG | - | chr3.3:62548165-62548184 | None:intergenic | 35.0% |
| !! | CATTGATTCCAAGTGTTTAG+GGG | + | chr3.3:62547298-62547317 | MS.gene007994:intron | 35.0% |
| !! | TGGACTTTAAACTTTTGGGA+TGG | + | chr3.3:62547193-62547212 | MS.gene007994:intron | 35.0% |
| !!! | AAGATGAGTTTTGGAAGGTA+CGG | - | chr3.3:62544406-62544425 | None:intergenic | 35.0% |
| !!! | ACAACTGCTGTTTTGAGTAT+TGG | - | chr3.3:62548201-62548220 | None:intergenic | 35.0% |
| !!! | GGACTTTAAACTTTTGGGAT+GGG | + | chr3.3:62547194-62547213 | MS.gene007994:intron | 35.0% |
| !!! | TTCCTGTTGCTGATTTTTTG+TGG | + | chr3.3:62546683-62546702 | MS.gene007994:CDS | 35.0% |
| !!! | TTCTGAAATTTTCTGGTGGT+GGG | + | chr3.3:62545742-62545761 | MS.gene007994:intron | 35.0% |
| AAATTATATGCACCTCCAGC+CGG | + | chr3.3:62546331-62546350 | MS.gene007994:CDS | 40.0% | |
| AAGAAGTTCTGCAATACCTC+CGG | - | chr3.3:62547558-62547577 | None:intergenic | 40.0% | |
| AAGCTCATATCTATCTGCAC+AGG | + | chr3.3:62546438-62546457 | MS.gene007994:CDS | 40.0% | |
| AAGGGCTTAAATTTGGAAGG+GGG | - | chr3.3:62546868-62546887 | None:intergenic | 40.0% | |
| AGAGAGAAGAAATGAAGCTC+CGG | - | chr3.3:62544607-62544626 | None:intergenic | 40.0% | |
| AGATATGAGCTTGGACCAAA+AGG | - | chr3.3:62546430-62546449 | None:intergenic | 40.0% | |
| AGCTTCATTTCTTCTCTCTG+CGG | + | chr3.3:62544608-62544627 | MS.gene007994:CDS | 40.0% | |
| AGGATGGTGTCTGCTATTAT+TGG | + | chr3.3:62547462-62547481 | MS.gene007994:intron | 40.0% | |
| AGTCCATATTTCCCTGAAGT+TGG | - | chr3.3:62549953-62549972 | None:intergenic | 40.0% | |
| ATAAACTTGACTGTCATGGC+AGG | + | chr3.3:62545537-62545556 | MS.gene007994:intron | 40.0% | |
| ATCGAGGATATACGATGCTA+CGG | + | chr3.3:62544740-62544759 | MS.gene007994:CDS | 40.0% | |
| ATCTGCAAATCTCCGTTATC+AGG | + | chr3.3:62548242-62548261 | MS.gene007994:CDS | 40.0% | |
| CAAGTGACATAGGGTGTAAT+TGG | - | chr3.3:62545325-62545344 | None:intergenic | 40.0% | |
| CACGGACAATCAATTCTTAC+TGG | + | chr3.3:62549165-62549184 | MS.gene007994:CDS | 40.0% | |
| CAGAGACTAGCAATAGAAGA+AGG | + | chr3.3:62547754-62547773 | MS.gene007994:CDS | 40.0% | |
| CATTTCAAAAGAACCCAGTG+GGG | + | chr3.3:62548004-62548023 | MS.gene007994:CDS | 40.0% | |
| CCAAAAGGAAACGACAGATT+CGG | - | chr3.3:62546415-62546434 | None:intergenic | 40.0% | |
| CGGACAATCAATTCTTACTG+GGG | + | chr3.3:62549167-62549186 | MS.gene007994:CDS | 40.0% | |
| CGTCCTAAGAGATCTTGTTA+TGG | + | chr3.3:62549577-62549596 | MS.gene007994:intron | 40.0% | |
| CTTCTTGATACAGGGTTTCA+GGG | + | chr3.3:62547702-62547721 | MS.gene007994:intron | 40.0% | |
| GAAATGGCTAACTAACCTGT+GGG | - | chr3.3:62546801-62546820 | None:intergenic | 40.0% | |
| GCATTTCAAAAGAACCCAGT+GGG | + | chr3.3:62548003-62548022 | MS.gene007994:CDS | 40.0% | |
| GCTATCTTATGCAACTCTAC+CGG | + | chr3.3:62550400-62550419 | MS.gene007994:CDS | 40.0% | |
| GTAGCAGAAATTGCTTTGAC+CGG | + | chr3.3:62546725-62546744 | MS.gene007994:CDS | 40.0% | |
| GTCCATATTTCCCTGAAGTT+GGG | - | chr3.3:62549952-62549971 | None:intergenic | 40.0% | |
| GTTTCTGTAGGAAATGGCAT+CGG | + | chr3.3:62548336-62548355 | MS.gene007994:intron | 40.0% | |
| TAACAATTGCCTTAATGGCC+AGG | + | chr3.3:62549701-62549720 | MS.gene007994:intron | 40.0% | |
| TAGCAGAAATTGCTTTGACC+GGG | + | chr3.3:62546726-62546745 | MS.gene007994:CDS | 40.0% | |
| TCTATCTTCTTCACTTCCTC+CGG | - | chr3.3:62544705-62544724 | None:intergenic | 40.0% | |
| TCTTCTTGATACAGGGTTTC+AGG | + | chr3.3:62547701-62547720 | MS.gene007994:intron | 40.0% | |
| TGCATTTCAAAAGAACCCAG+TGG | + | chr3.3:62548002-62548021 | MS.gene007994:CDS | 40.0% | |
| TGCGAATGAACTGTCTTTCT+GGG | - | chr3.3:62546651-62546670 | None:intergenic | 40.0% | |
| TGGCTTCAGGATCTTCAAAA+GGG | + | chr3.3:62547510-62547529 | MS.gene007994:intron | 40.0% | |
| TGTGCAGATAGATATGAGCT+TGG | - | chr3.3:62546439-62546458 | None:intergenic | 40.0% | |
| TTATTTCATCACTCTCGGTC+TGG | + | chr3.3:62547677-62547696 | MS.gene007994:intron | 40.0% | |
| TTCCAATTTAGGTCTGCAAC+TGG | + | chr3.3:62549017-62549036 | MS.gene007994:intron | 40.0% | |
| TTCCCAACTTCAGGGAAATA+TGG | + | chr3.3:62549947-62549966 | MS.gene007994:intron | 40.0% | |
| TTGAAATGCATTGTCAGGGA+TGG | - | chr3.3:62547992-62548011 | None:intergenic | 40.0% | |
| TTGAAGATCCTGAAGCCAAA+AGG | - | chr3.3:62547508-62547527 | None:intergenic | 40.0% | |
| TTGACTCATCAGCATAGGAA+AGG | - | chr3.3:62547927-62547946 | None:intergenic | 40.0% | |
| TTGGAAGCTTCGCTAACAAA+AGG | - | chr3.3:62549340-62549359 | None:intergenic | 40.0% | |
| TTGGCTTCAGGATCTTCAAA+AGG | + | chr3.3:62547509-62547528 | MS.gene007994:intron | 40.0% | |
| TTGGTAAATTGCTGCAGCAA+TGG | + | chr3.3:62550293-62550312 | MS.gene007994:intron | 40.0% | |
| TTTGGAGAATCTGATGAAGG+TGG | - | chr3.3:62550457-62550476 | None:intergenic | 40.0% | |
| TTTGGAGAATCTGATGTAGG+TGG | - | chr3.3:62550373-62550392 | None:intergenic | 40.0% | |
| ! | ATGCCATTTCCTACAGAAAC+TGG | - | chr3.3:62548336-62548355 | None:intergenic | 40.0% |
| ! | CAATCGGCTTACTTAAGATG+AGG | - | chr3.3:62549269-62549288 | None:intergenic | 40.0% |
| ! | CATCGGCATTATCTAGTTCA+TGG | + | chr3.3:62548353-62548372 | MS.gene007994:intron | 40.0% |
| ! | GAAAGAGAAAGGGAAAGTGT+GGG | + | chr3.3:62544788-62544807 | MS.gene007994:CDS | 40.0% |
| ! | GGTTTTCTTAGCTGTGTTGA+TGG | - | chr3.3:62544490-62544509 | None:intergenic | 40.0% |
| ! | GTTGCTGCTACTTATCTGTT+GGG | + | chr3.3:62545461-62545480 | MS.gene007994:intron | 40.0% |
| ! | TGAAAATGTGTATGGTGGAG+TGG | + | chr3.3:62549381-62549400 | MS.gene007994:intron | 40.0% |
| ! | TGCCATTTCCTACAGAAACT+GGG | - | chr3.3:62548335-62548354 | None:intergenic | 40.0% |
| !! | AGCTTTTTCTGCTGATCTTC+AGG | + | chr3.3:62544956-62544975 | MS.gene007994:CDS | 40.0% |
| !! | AGGAATGATAAAGTTGGTGC+AGG | - | chr3.3:62547907-62547926 | None:intergenic | 40.0% |
| !! | AGGAATTAGTGGGCTAACAA+AGG | + | chr3.3:62546300-62546319 | MS.gene007994:CDS | 40.0% |
| !! | AGGCACTGATACAAGATACA+TGG | - | chr3.3:62546946-62546965 | None:intergenic | 40.0% |
| !! | GGTATGTTGATAGTTGTGAC+TGG | + | chr3.3:62546529-62546548 | MS.gene007994:CDS | 40.0% |
| !! | GTCTGGTTCTTCTTGATACA+GGG | + | chr3.3:62547694-62547713 | MS.gene007994:intron | 40.0% |
| !!! | CTTCTGAAATTTTCTGGTGG+TGG | + | chr3.3:62545741-62545760 | MS.gene007994:intron | 40.0% |
| AAACTAGTTACCACTGCCGA+TGG | - | chr3.3:62547335-62547354 | None:intergenic | 45.0% | |
| AAATCTTCACGACAGCAGGT+TGG | - | chr3.3:62547080-62547099 | None:intergenic | 45.0% | |
| AAATGCCAACCTGGCCATTA+AGG | - | chr3.3:62549713-62549732 | None:intergenic | 45.0% | |
| AAGAAAACCGAACACCACGA+CGG | + | chr3.3:62544501-62544520 | MS.gene007994:CDS | 45.0% | |
| AAGACAGTTCATTCGCAGTG+AGG | + | chr3.3:62546654-62546673 | MS.gene007994:CDS | 45.0% | |
| AATCTTCACGACAGCAGGTT+GGG | - | chr3.3:62547079-62547098 | None:intergenic | 45.0% | |
| AATTGCCTTAATGGCCAGGT+TGG | + | chr3.3:62549705-62549724 | MS.gene007994:intron | 45.0% | |
| ACAGATCTTAAGGACTGTCC+AGG | + | chr3.3:62546273-62546292 | MS.gene007994:intron | 45.0% | |
| ACATATGGAGCTAGAGGAAC+TGG | + | chr3.3:62546565-62546584 | MS.gene007994:CDS | 45.0% | |
| ACCGAAGATAAATGCCAACC+TGG | - | chr3.3:62549722-62549741 | None:intergenic | 45.0% | |
| AGACAGTTCATTCGCAGTGA+GGG | + | chr3.3:62546655-62546674 | MS.gene007994:CDS | 45.0% | |
| AGATTCCAATTTGTCCCCAC+TGG | - | chr3.3:62548021-62548040 | None:intergenic | 45.0% | |
| AGATTGGACCCAGTTTCTGT+AGG | + | chr3.3:62548324-62548343 | MS.gene007994:intron | 45.0% | |
| AGCAACGATTGTTAAACCGG+AGG | + | chr3.3:62544686-62544705 | MS.gene007994:CDS | 45.0% | |
| AGCGGAGGAGGAGAATATAA+AGG | + | chr3.3:62544644-62544663 | MS.gene007994:CDS | 45.0% | |
| AGGAGGAAGTGATAACATCG+AGG | + | chr3.3:62544724-62544743 | MS.gene007994:CDS | 45.0% | |
| ATAGGTGAACCTTTGGCGAT+AGG | + | chr3.3:62544765-62544784 | MS.gene007994:CDS | 45.0% | |
| ATATACGATGCTACGGCGAT+AGG | + | chr3.3:62544747-62544766 | MS.gene007994:CDS | 45.0% | |
| ATATGGAGCTAGAGGAACTG+GGG | + | chr3.3:62546567-62546586 | MS.gene007994:CDS | 45.0% | |
| ATTTCTGCTACATGGTCTGG+CGG | - | chr3.3:62546716-62546735 | None:intergenic | 45.0% | |
| CACAACTATCAACATACCGG+TGG | - | chr3.3:62546527-62546546 | None:intergenic | 45.0% | |
| CAGATAAGTAGCAGCAACCA+AGG | - | chr3.3:62545459-62545478 | None:intergenic | 45.0% | |
| CATATGGAGCTAGAGGAACT+GGG | + | chr3.3:62546566-62546585 | MS.gene007994:CDS | 45.0% | |
| CATGTCACATATGGAGCTAG+AGG | + | chr3.3:62546559-62546578 | MS.gene007994:CDS | 45.0% | |
| CGAAATGGCTAACTAACCTG+TGG | - | chr3.3:62546802-62546821 | None:intergenic | 45.0% | |
| CTCAAAGCGCAAGTGACATA+GGG | - | chr3.3:62545334-62545353 | None:intergenic | 45.0% | |
| CTGCGAATGAACTGTCTTTC+TGG | - | chr3.3:62546652-62546671 | None:intergenic | 45.0% | |
| GAATCAAGCTTGATCCTCCT+CGG | - | chr3.3:62546193-62546212 | None:intergenic | 45.0% | |
| GACCCAGTTTCTGTAGGAAA+TGG | + | chr3.3:62548330-62548349 | MS.gene007994:intron | 45.0% | |
| GAGAAAGAAGCCTGAGCATT+GGG | - | chr3.3:62544333-62544352 | None:intergenic | 45.0% | |
| GAGTACCACAAGCAACAAGA+CGG | - | chr3.3:62545661-62545680 | None:intergenic | 45.0% | |
| GATTCCAATTTGTCCCCACT+GGG | - | chr3.3:62548020-62548039 | None:intergenic | 45.0% | |
| GCAATTTCTGCTACATGGTC+TGG | - | chr3.3:62546719-62546738 | None:intergenic | 45.0% | |
| GGAAAGAGAAAGGGAAAGTG+TGG | + | chr3.3:62544787-62544806 | MS.gene007994:CDS | 45.0% | |
| GGAAGTGAAGAAGATAGAGG+AGG | + | chr3.3:62544707-62544726 | MS.gene007994:CDS | 45.0% | |
| GGAGGAAGTGAAGAAGATAG+AGG | + | chr3.3:62544704-62544723 | MS.gene007994:CDS | 45.0% | |
| GGGTTTCAGGGAAAGATTGT+TGG | + | chr3.3:62547714-62547733 | MS.gene007994:intron | 45.0% | |
| GTACAAATCTTCACGACAGC+AGG | - | chr3.3:62547084-62547103 | None:intergenic | 45.0% | |
| GTTATTACGGACACTGTCAG+AGG | + | chr3.3:62547850-62547869 | MS.gene007994:CDS | 45.0% | |
| TAGGTGAACCTTTGGCGATA+GGG | + | chr3.3:62544766-62544785 | MS.gene007994:CDS | 45.0% | |
| TATAATTGAGCCATCGGCAG+TGG | + | chr3.3:62547322-62547341 | MS.gene007994:intron | 45.0% | |
| TCCAGGCAGAAGGAATTAGT+GGG | + | chr3.3:62546290-62546309 | MS.gene007994:CDS | 45.0% | |
| TCTCAAAGCGCAAGTGACAT+AGG | - | chr3.3:62545335-62545354 | None:intergenic | 45.0% | |
| TCTTAGGACGCTCTTAGACA+AGG | - | chr3.3:62549567-62549586 | None:intergenic | 45.0% | |
| TCTTGGTTTAGTATCACCGG+AGG | + | chr3.3:62547539-62547558 | MS.gene007994:CDS | 45.0% | |
| TGGCGATAGGGAAAGAGAAA+GGG | + | chr3.3:62544778-62544797 | MS.gene007994:CDS | 45.0% | |
| TGGGTTTAGACAGAGTCGTA+TGG | + | chr3.3:62546130-62546149 | MS.gene007994:intron | 45.0% | |
| TTCTCTTTCCCTATCGCCAA+AGG | - | chr3.3:62544777-62544796 | None:intergenic | 45.0% | |
| TTGGCGATAGGGAAAGAGAA+AGG | + | chr3.3:62544777-62544796 | MS.gene007994:CDS | 45.0% | |
| TTGTAACTAACTTCACGCCG+AGG | + | chr3.3:62546173-62546192 | MS.gene007994:intron | 45.0% | |
| ! | AGGGGGTATAATTGAGCCAT+CGG | + | chr3.3:62547316-62547335 | MS.gene007994:intron | 45.0% |
| ! | CGCAATTGACTCATCAGCAT+AGG | - | chr3.3:62547932-62547951 | None:intergenic | 45.0% |
| ! | CTCTAGCTCCATATGTGACA+TGG | - | chr3.3:62546561-62546580 | None:intergenic | 45.0% |
| ! | GCCAGGTTGGCATTTATCTT+CGG | + | chr3.3:62549718-62549737 | MS.gene007994:intron | 45.0% |
| ! | GCTAGTCTCTGCAAGAACTT+GGG | - | chr3.3:62547745-62547764 | None:intergenic | 45.0% |
| ! | GGGCAATGAGAGCACATAAA+GGG | - | chr3.3:62546886-62546905 | None:intergenic | 45.0% |
| ! | GGTCTTTCTAACTTGCAGTC+CGG | - | chr3.3:62550338-62550357 | None:intergenic | 45.0% |
| ! | GGTCTTTGTAACTTGCAGTC+CGG | - | chr3.3:62550422-62550441 | None:intergenic | 45.0% |
| ! | GGTTGCTGCTACTTATCTGT+TGG | + | chr3.3:62545460-62545479 | MS.gene007994:intron | 45.0% |
| ! | TCTTAGCTGTGTTGATGGAG+AGG | - | chr3.3:62544485-62544504 | None:intergenic | 45.0% |
| ! | TGCTAGTCTCTGCAAGAACT+TGG | - | chr3.3:62547746-62547765 | None:intergenic | 45.0% |
| ! | TGGGCAATGAGAGCACATAA+AGG | - | chr3.3:62546887-62546906 | None:intergenic | 45.0% |
| ! | TGTGCTCTCATTGCCCATTT+TGG | + | chr3.3:62546890-62546909 | MS.gene007994:intron | 45.0% |
| ! | TGTTGATGGAGAGGTTGACA+CGG | - | chr3.3:62544476-62544495 | None:intergenic | 45.0% |
| ! | TTGGTGGTCTAAAACTCGCT+GGG | + | chr3.3:62548067-62548086 | MS.gene007994:CDS | 45.0% |
| ! | TTTGGTGGTCTAAAACTCGC+TGG | + | chr3.3:62548066-62548085 | MS.gene007994:CDS | 45.0% |
| !! | CCGAATCTGTCGTTTCCTTT+TGG | + | chr3.3:62546412-62546431 | MS.gene007994:CDS | 45.0% |
| !! | GGTCTGGTTCTTCTTGATAC+AGG | + | chr3.3:62547693-62547712 | MS.gene007994:intron | 45.0% |
| !! | TGAGTGAGTTCTGAAAGCAG+AGG | - | chr3.3:62547597-62547616 | None:intergenic | 45.0% |
| !! | TTTCTGGTGGTGGGTTAATC+AGG | + | chr3.3:62545751-62545770 | MS.gene007994:intron | 45.0% |
| !!! | GGTGGAAGATGAGTTTTGGA+AGG | - | chr3.3:62544411-62544430 | None:intergenic | 45.0% |
| ACTTGACTGTCATGGCAGGA+TGG | + | chr3.3:62545541-62545560 | MS.gene007994:intron | 50.0% | |
| AGAACCCAGTGGGGACAAAT+TGG | + | chr3.3:62548013-62548032 | MS.gene007994:CDS | 50.0% | |
| AGAACTCACTCACCGTTTCC+AGG | + | chr3.3:62547605-62547624 | MS.gene007994:CDS | 50.0% | |
| AGGGGAAGCTGAACAAGTTC+CGG | + | chr3.3:62544842-62544861 | MS.gene007994:CDS | 50.0% | |
| ATGGCTAACTAACCTGTGGG+AGG | - | chr3.3:62546798-62546817 | None:intergenic | 50.0% | |
| ATTGACCTTGCACGCTCTAC+CGG | + | chr3.3:62550316-62550335 | MS.gene007994:CDS | 50.0% | |
| CAATTCTTACTGGGGAACGC+AGG | + | chr3.3:62549175-62549194 | MS.gene007994:CDS | 50.0% | |
| CGGTGAAAGTAAGTCACGTG+CGG | - | chr3.3:62544366-62544385 | None:intergenic | 50.0% | |
| CTCGGGTTATGAATGCTGCT+GGG | + | chr3.3:62546758-62546777 | MS.gene007994:CDS | 50.0% | |
| GAACACCACGACGGAAACAA+CGG | + | chr3.3:62544510-62544529 | MS.gene007994:CDS | 50.0% | |
| GAATCTGATGAAGGTGGCTC+AGG | - | chr3.3:62550451-62550470 | None:intergenic | 50.0% | |
| GAATCTGATGTAGGTGGCTC+AGG | - | chr3.3:62550367-62550386 | None:intergenic | 50.0% | |
| GAGAAGAAATGAAGCTCCGG+CGG | - | chr3.3:62544604-62544623 | None:intergenic | 50.0% | |
| GCAGACACCATCCTGTCTAA+AGG | - | chr3.3:62547456-62547475 | None:intergenic | 50.0% | |
| GCAGATAATTGCTGGGGTTG+TGG | + | chr3.3:62549079-62549098 | MS.gene007994:intron | 50.0% | |
| GCCTGATATGAAGCCTGAAC+CGG | - | chr3.3:62546353-62546372 | None:intergenic | 50.0% | |
| GGAGAAAGAAGCCTGAGCAT+TGG | - | chr3.3:62544334-62544353 | None:intergenic | 50.0% | |
| GGCCAGTTGCAGACCTAAAT+TGG | - | chr3.3:62549022-62549041 | None:intergenic | 50.0% | |
| GGTGCAAGCCATGTCACATA+TGG | + | chr3.3:62546550-62546569 | MS.gene007994:CDS | 50.0% | |
| GTCCAGGCAGAAGGAATTAG+TGG | + | chr3.3:62546289-62546308 | MS.gene007994:CDS | 50.0% | |
| GTTCTTCAGCACGAAGCAAC+CGG | + | chr3.3:62544550-62544569 | MS.gene007994:CDS | 50.0% | |
| TAACCCGAGCAATCTCAACC+CGG | - | chr3.3:62546747-62546766 | None:intergenic | 50.0% | |
| TAACTAACTTCACGCCGAGG+AGG | + | chr3.3:62546176-62546195 | MS.gene007994:intron | 50.0% | |
| TACGGCGATAGGTGAACCTT+TGG | + | chr3.3:62544758-62544777 | MS.gene007994:CDS | 50.0% | |
| TCATACTCCTGCCATCGTTC+AGG | - | chr3.3:62545605-62545624 | None:intergenic | 50.0% | |
| TCTATCTGCACAGGCTAGAG+TGG | + | chr3.3:62546447-62546466 | MS.gene007994:CDS | 50.0% | |
| TGAAAGTAAGTCACGTGCGG+CGG | - | chr3.3:62544363-62544382 | None:intergenic | 50.0% | |
| TGCTTGTGGTACTCCACTGA+AGG | + | chr3.3:62545667-62545686 | MS.gene007994:CDS | 50.0% | |
| TGGCTAACTAACCTGTGGGA+GGG | - | chr3.3:62546797-62546816 | None:intergenic | 50.0% | |
| TTAAGGACTGTCCAGGCAGA+AGG | + | chr3.3:62546280-62546299 | MS.gene007994:CDS | 50.0% | |
| ! | GGAATCCGTCTTGTTGCTTG+TGG | + | chr3.3:62545653-62545672 | MS.gene007994:CDS | 50.0% |
| ! | GTTGTTTCCGTCGTGGTGTT+CGG | - | chr3.3:62544511-62544530 | None:intergenic | 50.0% |
| ! | TGGTGGTCTAAAACTCGCTG+GGG | + | chr3.3:62548068-62548087 | MS.gene007994:CDS | 50.0% |
| ! | TGTCGGAGTTTTTCGTTCGG+CGG | - | chr3.3:62544432-62544451 | None:intergenic | 50.0% |
| ! | TTGACCGGGTTGAGATTGCT+CGG | + | chr3.3:62546740-62546759 | MS.gene007994:CDS | 50.0% |
| GAAAGTAAGTCACGTGCGGC+GGG | - | chr3.3:62544362-62544381 | None:intergenic | 55.0% | |
| GACTGTCATGGCAGGATGGA+TGG | + | chr3.3:62545545-62545564 | MS.gene007994:intron | 55.0% | |
| GATATGAAGCCTGAACCGGC+TGG | - | chr3.3:62546349-62546368 | None:intergenic | 55.0% | |
| GCCCACTAATTCCTTCTGCC+TGG | - | chr3.3:62546294-62546313 | None:intergenic | 55.0% | |
| GCTCAGGCTTCTTTCTCCAC+AGG | + | chr3.3:62544336-62544355 | MS.gene007994:CDS | 55.0% | |
| GCTCGGGTTATGAATGCTGC+TGG | + | chr3.3:62546757-62546776 | MS.gene007994:CDS | 55.0% | |
| TACTCCTGCCATCGTTCAGG+CGG | - | chr3.3:62545602-62545621 | None:intergenic | 55.0% | |
| TGAAGGTGGCTCAGGTGACT+CGG | - | chr3.3:62550443-62550462 | None:intergenic | 55.0% | |
| TGAATGCTGCTGGGCAGAGA+CGG | + | chr3.3:62546767-62546786 | MS.gene007994:CDS | 55.0% | |
| TGATGGAGAGGTTGACACGG+CGG | - | chr3.3:62544473-62544492 | None:intergenic | 55.0% | |
| TGTAGGTGGCTCAGGTGACT+CGG | - | chr3.3:62550359-62550378 | None:intergenic | 55.0% | |
| TTGCTGGGGTTGTGGAGCAT+CGG | + | chr3.3:62549087-62549106 | MS.gene007994:CDS | 55.0% | |
| ! | CGGCGGTGGAAGATGAGTTT+TGG | - | chr3.3:62544415-62544434 | None:intergenic | 55.0% |
| ! | GCCGGTTCAGGCTTCATATC+AGG | + | chr3.3:62546349-62546368 | MS.gene007994:CDS | 55.0% |
| ! | GGTCTAAAACTCGCTGGGGT+TGG | + | chr3.3:62548072-62548091 | MS.gene007994:CDS | 55.0% |
| ! | TGACCGGGTTGAGATTGCTC+GGG | + | chr3.3:62546741-62546760 | MS.gene007994:CDS | 55.0% |
| ATGAAGCCTGAACCGGCTGG+AGG | - | chr3.3:62546346-62546365 | None:intergenic | 60.0% | |
| ATGCTTGATGGAGGGGCCAC+CGG | + | chr3.3:62546508-62546527 | MS.gene007994:CDS | 60.0% | |
| GAAGCTCCGGCGGCTAGAAA+CGG | - | chr3.3:62544594-62544613 | None:intergenic | 60.0% | |
| GAATGCTGCTGGGCAGAGAC+GGG | + | chr3.3:62546768-62546787 | MS.gene007994:CDS | 60.0% | |
| GTTTGGCGGCGCGGAATTGT+CGG | - | chr3.3:62544449-62544468 | None:intergenic | 60.0% | |
| TCTCTCTGCGGCGACGACAA+GGG | + | chr3.3:62544620-62544639 | MS.gene007994:CDS | 60.0% | |
| TTCTCTCTGCGGCGACGACA+AGG | + | chr3.3:62544619-62544638 | MS.gene007994:CDS | 60.0% | |
| ! | CGGAGTTTTTCGTTCGGCGG+TGG | - | chr3.3:62544429-62544448 | None:intergenic | 60.0% |
| ! | GGAAGGTACGGCACGTGAGA+CGG | - | chr3.3:62544394-62544413 | None:intergenic | 60.0% |
| ! | TATGCACCTCCAGCCGGTTC+AGG | + | chr3.3:62546337-62546356 | MS.gene007994:CDS | 60.0% |
| !! | CAACCGGCGAGGAGTGTTGA+TGG | + | chr3.3:62544566-62544585 | MS.gene007994:CDS | 60.0% |
| CGGCACGTGAGACGGTTACG+CGG | - | chr3.3:62544386-62544405 | None:intergenic | 65.0% | |
| GAGGTTGACACGGCGGCGTT+TGG | - | chr3.3:62544466-62544485 | None:intergenic | 65.0% | |
| GCAGTCCGGTAGAGCGTGCA+AGG | - | chr3.3:62550324-62550343 | None:intergenic | 65.0% | |
| GCGCCATCAACACTCCTCGC+CGG | - | chr3.3:62544572-62544591 | None:intergenic | 65.0% | |
| GTTGACACGGCGGCGTTTGG+CGG | - | chr3.3:62544463-62544482 | None:intergenic | 65.0% | |
| TCAGCACGAAGCAACCGGCG+AGG | + | chr3.3:62544555-62544574 | MS.gene007994:CDS | 65.0% | |
| TTGGCCGCCTGAACGATGGC+AGG | + | chr3.3:62545595-62545614 | MS.gene007994:CDS | 65.0% | |
| ! | CGACGCCGTTGTTTCCGTCG+TGG | - | chr3.3:62544518-62544537 | None:intergenic | 65.0% |
| ! | CGCATTGGCCGCCTGAACGA+TGG | + | chr3.3:62545591-62545610 | MS.gene007994:CDS | 65.0% |
| !! | ATGGCGCCGTTTCTAGCCGC+CGG | + | chr3.3:62544585-62544604 | MS.gene007994:CDS | 65.0% |
| GACGACAAGGGCAGCGGAGG+AGG | + | chr3.3:62544632-62544651 | MS.gene007994:CDS | 70.0% | |
| GAGACGGGATGCCCTCCCAC+AGG | + | chr3.3:62546783-62546802 | MS.gene007994:CDS | 70.0% | |
| TGCGGCGACGACAAGGGCAG+CGG | + | chr3.3:62544626-62544645 | MS.gene007994:CDS | 70.0% | |
| AGTCACGTGCGGCGGGCCTG+TGG | - | chr3.3:62544355-62544374 | None:intergenic | 75.0% | |
| GGCGACGACAAGGGCAGCGG+AGG | + | chr3.3:62544629-62544648 | MS.gene007994:CDS | 75.0% | |
| ! | CACGGCGGCGTTTGGCGGCG+CGG | - | chr3.3:62544458-62544477 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 62544324 | 62550540 | 62544324 | ID=MS.gene007994 |
| chr3.3 | mRNA | 62544324 | 62550540 | 62544324 | ID=MS.gene007994.t1;Parent=MS.gene007994 |
| chr3.3 | exon | 62544324 | 62545006 | 62544324 | ID=MS.gene007994.t1.exon1;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62544324 | 62545006 | 62544324 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62545559 | 62545688 | 62545559 | ID=MS.gene007994.t1.exon2;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62545559 | 62545688 | 62545559 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62546277 | 62546804 | 62546277 | ID=MS.gene007994.t1.exon3;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62546277 | 62546804 | 62546277 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62547519 | 62547626 | 62547519 | ID=MS.gene007994.t1.exon4;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62547519 | 62547626 | 62547519 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62547715 | 62548263 | 62547715 | ID=MS.gene007994.t1.exon5;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62547715 | 62548263 | 62547715 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62549083 | 62549196 | 62549083 | ID=MS.gene007994.t1.exon6;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62549083 | 62549196 | 62549083 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| chr3.3 | exon | 62550310 | 62550540 | 62550310 | ID=MS.gene007994.t1.exon7;Parent=MS.gene007994.t1 |
| chr3.3 | CDS | 62550310 | 62550540 | 62550310 | ID=cds.MS.gene007994.t1;Parent=MS.gene007994.t1 |
| Gene Sequence |
| Protein sequence |
