AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039996

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039996.t1 MTR_3g071970 97.179 780 22 0 1 780 1 780 0.0 1572
MS.gene039996.t1 MTR_0013s0150 37.288 295 168 6 427 716 95 377 2.11e-55 195
MS.gene039996.t1 MTR_3g033620 35.315 286 170 5 434 716 114 387 7.74e-49 177
MS.gene039996.t1 MTR_4g077000 34.828 290 176 5 430 716 109 388 2.22e-48 176
MS.gene039996.t1 MTR_7g064130 27.897 233 161 3 485 716 222 448 4.94e-24 106
MS.gene039996.t1 MTR_2g084605 29.010 293 184 8 434 716 114 392 1.25e-21 98.2
MS.gene039996.t1 MTR_7g074070 29.461 241 139 7 482 716 103 318 1.38e-17 85.5
MS.gene039996.t1 MTR_2g081000 27.092 251 162 5 426 670 173 408 1.20e-16 84.3
MS.gene039996.t1 MTR_7g074090 26.939 245 154 6 483 724 93 315 2.77e-16 81.3
MS.gene039996.t1 MTR_7g074090 26.939 245 154 6 483 724 93 315 1.49e-15 79.7
MS.gene039996.t1 MTR_7g074090 26.939 245 154 6 483 724 111 333 2.09e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039996.t1 AT2G40400 68.981 648 172 3 134 780 116 735 0.0 951
MS.gene039996.t1 AT2G40400 68.981 648 172 3 134 780 116 735 0.0 951
MS.gene039996.t1 AT3G56140 73.892 609 158 1 134 741 125 733 0.0 946
MS.gene039996.t1 AT3G56140 73.892 609 158 1 134 741 125 733 0.0 946
MS.gene039996.t1 AT2G40400 74.206 535 137 1 134 667 116 650 0.0 864
MS.gene039996.t1 AT3G56140 73.735 514 134 1 229 741 1 514 0.0 788
MS.gene039996.t1 AT5G12470 35.739 291 178 5 427 716 101 383 1.17e-51 185
MS.gene039996.t1 AT2G37860 26.441 295 199 7 429 716 149 432 3.00e-25 110
MS.gene039996.t1 AT2G37860 26.441 295 199 7 429 716 149 432 3.00e-25 110
MS.gene039996.t1 AT5G22790 27.778 288 195 7 434 716 154 433 6.10e-25 108
MS.gene039996.t1 AT3G08630 29.237 236 146 8 483 716 103 319 3.10e-21 96.3
MS.gene039996.t1 AT3G08640 28.287 251 157 8 483 729 106 337 1.36e-20 94.4
MS.gene039996.t1 AT5G24690 27.203 261 168 6 426 680 172 416 1.09e-17 87.4
MS.gene039996.t1 AT2G37860 23.858 197 146 2 434 629 154 347 6.07e-13 71.6
MS.gene039996.t1 AT2G37860 23.858 197 146 2 434 629 154 347 6.07e-13 71.6

Find 204 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCGAATGAACTGTCTTTC+TGG 0.090777 3.2:-65139723 None:intergenic
TCTTCTTGATACAGGGTTTC+AGG 0.152745 3.2:+65140773 MS.gene039996:intron
CGAATTGCATCAGTTGTATT+TGG 0.192343 3.2:+65141120 MS.gene039996:CDS
CTTAGTTACTGTCGTGAAAA+TGG 0.222076 3.2:+65138706 MS.gene039996:CDS
GAATGCTAGAGTTGTGTATT+TGG 0.273191 3.2:+65137943 MS.gene039996:CDS
CATAAGATTGCAGCTTGATT+TGG 0.278656 3.2:-65143434 None:intergenic
AATGCTAGAGTTGTGTATTT+GGG 0.288954 3.2:+65137944 MS.gene039996:CDS
TGTTGATAAGCGATTATCTT+TGG 0.300117 3.2:+65138048 MS.gene039996:CDS
CCAAATCTGTCGTTTCCTTT+TGG 0.305738 3.2:+65139486 MS.gene039996:CDS
GCCGGTTCAGGCTTCATATC+AGG 0.318344 3.2:+65139423 MS.gene039996:CDS
CATAAGATAGCAGCTTGATT+TGG 0.319979 3.2:-65143350 None:intergenic
CTTCAAAAGGGAATTGATCT+TGG 0.320765 3.2:+65140595 MS.gene039996:CDS
CACGGACAATCAATTCTTAC+TGG 0.323981 3.2:+65142166 MS.gene039996:CDS
TTTCTCATCAACAGATCTTA+AGG 0.326958 3.2:+65139337 MS.gene039996:intron
GCATATTTACAAGAAATGTT+TGG 0.329508 3.2:-65142131 None:intergenic
AGAACCCAGTGGGGACAAAT+TGG 0.330231 3.2:+65141085 MS.gene039996:CDS
ATCTGCAAATCTCCGTTATC+AGG 0.331816 3.2:+65141314 MS.gene039996:CDS
AGTTCTCTAATAGGACTTCT+TGG 0.338841 3.2:+65141036 MS.gene039996:CDS
TGCTAGTCTTTGCAAGAACT+TGG 0.340316 3.2:-65140815 None:intergenic
AGAACTCACTCACCGTTTCC+AGG 0.340540 3.2:+65140678 MS.gene039996:CDS
GACGACAAGGGCGGCGGAGG+AGG 0.358045 3.2:+65137754 MS.gene039996:CDS
CATATTTACAAGAAATGTTT+GGG 0.367643 3.2:-65142130 None:intergenic
ATTAGAGAACTAATGTTATC+AGG 0.372366 3.2:-65141024 None:intergenic
TGAAGCAACGGTTGTTAAAC+CGG 0.377949 3.2:+65137805 MS.gene039996:CDS
ACATATGGAGCTAGAGGAAC+TGG 0.381829 3.2:+65139639 MS.gene039996:CDS
CCAAAAGGAAACGACAGATT+TGG 0.382199 3.2:-65139486 None:intergenic
TATGCACCTCCAGCCGGTTC+AGG 0.382397 3.2:+65139411 MS.gene039996:CDS
GGAGCCACTTAATCAGTATA+TGG 0.382755 3.2:+65138099 MS.gene039996:CDS
TTTGATATGCAGATAATTGC+TGG 0.385689 3.2:+65142072 MS.gene039996:intron
GCGAAAGAAGCCTGGGCATT+GGG 0.389102 3.2:-65137452 None:intergenic
ATGCATTGTATAAGACTTCA+AGG 0.390763 3.2:-65138647 None:intergenic
GATAACATTAGTTCTCTAAT+AGG 0.396181 3.2:+65141027 MS.gene039996:CDS
ATCTTACAAAATATGCTTGA+TGG 0.396790 3.2:+65139570 MS.gene039996:CDS
GGCCTGTGGCGAAAGAAGCC+TGG 0.397330 3.2:-65137460 None:intergenic
AGAGCTTGACTATGTTATTA+CGG 0.398518 3.2:+65140909 MS.gene039996:CDS
GCTCGGGTTATGAATGCTGC+TGG 0.402906 3.2:+65139831 MS.gene039996:CDS
GTCAAAGCAATTTCTGCTAC+AGG 0.405412 3.2:-65139796 None:intergenic
TTCTTTCTGCGGCGACGACA+AGG 0.406359 3.2:+65137741 MS.gene039996:CDS
GCAATTTCTGCTACAGGGTC+TGG 0.409182 3.2:-65139790 None:intergenic
GGTTCGAGATGATAAGGAAT+TGG 0.416736 3.2:+65137985 MS.gene039996:CDS
CAACCGGCGAGGAGTGTTGA+TGG 0.420911 3.2:+65137688 MS.gene039996:CDS
TCGGAGGTGGAAGATGAGTC+TGG 0.423468 3.2:-65137535 None:intergenic
TTGGCTTCAGGATCTTCAAA+AGG 0.426441 3.2:+65140582 MS.gene039996:intron
ATTGACCTCGCACGCTCTAC+TGG 0.429541 3.2:+65143278 MS.gene039996:CDS
GTTGGATTTATTTCAAGTAT+TGG 0.430933 3.2:+65141162 MS.gene039996:CDS
AGATATGAGCTTGGACCAAA+AGG 0.431226 3.2:-65139501 None:intergenic
AGATTCCAATTTGTCCCCAC+TGG 0.431706 3.2:-65141090 None:intergenic
GGAGAAGATAAAGGAGAATA+CGG 0.432178 3.2:+65137775 MS.gene039996:CDS
GGAAAGAGAGAGGGAAAGTG+TGG 0.432186 3.2:+65137909 MS.gene039996:CDS
TTATCCATATACTGATTAAG+TGG 0.432289 3.2:-65138103 None:intergenic
TCATACTCCTGCCATCGTTC+AGG 0.432726 3.2:-65138676 None:intergenic
TCACGACAGTAACTAAGAAT+AGG 0.433080 3.2:-65138700 None:intergenic
TGTTTGTTAGTGATAATTGC+TGG 0.433263 3.2:-65141234 None:intergenic
GGCGACGACAAGGGCGGCGG+AGG 0.433973 3.2:+65137751 MS.gene039996:CDS
GGCGAATGAACTGTCTTTCT+GGG 0.434604 3.2:-65139722 None:intergenic
TAGGTGAACCGTTGGCGATA+GGG 0.435940 3.2:+65137888 MS.gene039996:CDS
TTGACCGGGTTGAGATTGCT+CGG 0.437015 3.2:+65139814 MS.gene039996:CDS
GCCCAGGCTTCTTTCGCCAC+AGG 0.438210 3.2:+65137458 MS.gene039996:CDS
CCTCGCCGGTTGCTTCGTAC+TGG 0.441228 3.2:-65137677 None:intergenic
GGCGGAGGAGGAGAAGATAA+AGG 0.443539 3.2:+65137766 MS.gene039996:CDS
TCTATCTTCTTCACCTCCTC+CGG 0.445871 3.2:-65137824 None:intergenic
GTTGTTTCCGTCGTGGTGTT+CGG 0.446693 3.2:-65137630 None:intergenic
GGTCTAAAACTCGCTGGCGT+TGG 0.455815 3.2:+65141144 MS.gene039996:CDS
GCCTGATATGAAGCCTGAAC+CGG 0.457500 3.2:-65139424 None:intergenic
CTCTCTTTCCCTATCGCCAA+CGG 0.462103 3.2:-65137896 None:intergenic
CTTCTTGATACAGGGTTTCA+GGG 0.463114 3.2:+65140774 MS.gene039996:intron
GGCGAAAGAAGCCTGGGCAT+TGG 0.464505 3.2:-65137453 None:intergenic
GTAGCAGAAATTGCTTTGAC+CGG 0.474834 3.2:+65139799 MS.gene039996:CDS
GGTGCAAGCCATGTCACATA+TGG 0.477383 3.2:+65139624 MS.gene039996:CDS
TACGGTGTCGGTTGAAGCAA+CGG 0.484374 3.2:+65137793 MS.gene039996:CDS
GCCTGTGGCGAAAGAAGCCT+GGG 0.486642 3.2:-65137459 None:intergenic
GGTATTGTTAGCTGCGGTGA+TGG 0.488263 3.2:-65137609 None:intergenic
GCAGATAATTGCTGGGGTTG+TGG 0.489520 3.2:+65142080 MS.gene039996:intron
ATTGCATCAGTTGTATTTGG+TGG 0.489742 3.2:+65141123 MS.gene039996:CDS
GCCCACTAATCCCTTCTGCT+TGG 0.490070 3.2:-65139365 None:intergenic
TGGCTTCAGGATCTTCAAAA+GGG 0.490844 3.2:+65140583 MS.gene039996:intron
TGCGGCGACGACAAGGGCGG+CGG 0.493291 3.2:+65137748 MS.gene039996:CDS
GATTCCAATTTGTCCCCACT+GGG 0.496606 3.2:-65141089 None:intergenic
TGATCTTGGTTTAGTATCAC+CGG 0.498342 3.2:+65140609 MS.gene039996:CDS
GGGTTTCAGGGAAAGATTGT+TGG 0.502306 3.2:+65140786 MS.gene039996:intron
TCTTTCTGCGGCGACGACAA+GGG 0.503242 3.2:+65137742 MS.gene039996:CDS
AGTTCCGGTTCGAGATGATA+AGG 0.504021 3.2:+65137979 MS.gene039996:CDS
AATACAAATTTACCTGGAAA+CGG 0.504032 3.2:-65140690 None:intergenic
GTCCAAGCAGAAGGGATTAG+TGG 0.505797 3.2:+65139363 MS.gene039996:CDS
TTGATATGCAGATAATTGCT+GGG 0.507089 3.2:+65142073 MS.gene039996:intron
ATGCTTGATGGAGGGGCCAC+CGG 0.507280 3.2:+65139582 MS.gene039996:CDS
CTCTAGCTCCATATGTGACA+TGG 0.508607 3.2:-65139632 None:intergenic
ACAAAATATGCTTGATGGAG+GGG 0.508686 3.2:+65139575 MS.gene039996:CDS
TTGAAATGCATTGTCAGGGA+TGG 0.509174 3.2:-65141061 None:intergenic
GTTCTCCAGTACGAAGCAAC+CGG 0.512381 3.2:+65137672 MS.gene039996:CDS
GAAAGTAAGTCACGTGCGGC+GGG 0.513194 3.2:-65137481 None:intergenic
GTTCTCTAAATACCTGATAA+CGG 0.515162 3.2:-65141326 None:intergenic
ATAGGTGAACCGTTGGCGAT+AGG 0.517601 3.2:+65137887 MS.gene039996:CDS
ACGGACAATCAATTCTTACT+GGG 0.519712 3.2:+65142167 MS.gene039996:CDS
AGGAATGATAAAGTTGGTGC+AGG 0.519719 3.2:-65140976 None:intergenic
TTAAGGACTGTCCAAGCAGA+AGG 0.520748 3.2:+65139354 MS.gene039996:CDS
GAATCTGATGTAGGTGGCTC+AGG 0.521983 3.2:-65143326 None:intergenic
TTGGCCGCCTGAACGATGGC+AGG 0.528649 3.2:+65138669 MS.gene039996:CDS
AGTGGCTCCTGAAGATCAGC+AGG 0.528866 3.2:-65138085 None:intergenic
GCTAGTCTTTGCAAGAACTT+GGG 0.533750 3.2:-65140814 None:intergenic
GAATCTGATGAAGGTGGCTC+AGG 0.534682 3.2:-65143410 None:intergenic
ATATATGATGCAACGGCGAT+AGG 0.534917 3.2:+65137869 MS.gene039996:CDS
TGAAGTCTTATACAATGCAT+TGG 0.535749 3.2:+65138650 MS.gene039996:CDS
TAGGAAAGGAATGATAAAGT+TGG 0.537940 3.2:-65140982 None:intergenic
CAAAGACTAGCAATAGAAGA+AGG 0.538188 3.2:+65140826 MS.gene039996:CDS
AATTCCTTATCATCTCGAAC+CGG 0.538956 3.2:-65137983 None:intergenic
GACTGTCATGGCAGGATGGA+TGG 0.539731 3.2:+65138619 MS.gene039996:intron
AGCTTCCTTTCTTCTTTCTG+CGG 0.540180 3.2:+65137730 MS.gene039996:CDS
TTGCTGGGGTTGTGGAGCAT+CGG 0.546344 3.2:+65142088 MS.gene039996:CDS
TGAAGGTGGCTCAGGTGACT+CGG 0.549801 3.2:-65143402 None:intergenic
TGAATGCTGCTGGGCAGAGA+CGG 0.550691 3.2:+65139841 MS.gene039996:CDS
AGTCACGTGCGGCGGGCCTG+TGG 0.551744 3.2:-65137474 None:intergenic
GAAAGAGAGAGGGAAAGTGT+GGG 0.552614 3.2:+65137910 MS.gene039996:CDS
GAATGCTGCTGGGCAGAGAC+GGG 0.554415 3.2:+65139842 MS.gene039996:CDS
GAGACGGGATGCCCTCCCAC+AGG 0.554747 3.2:+65139857 MS.gene039996:CDS
TGTAGGTGGCTCAGGTGACT+CGG 0.556660 3.2:-65143318 None:intergenic
AAATTATATGCACCTCCAGC+CGG 0.558669 3.2:+65139405 MS.gene039996:CDS
TTGTAAAGAATTTGCATAAG+CGG 0.562562 3.2:+65138017 MS.gene039996:CDS
TGACCGGGTTGAGATTGCTC+GGG 0.562769 3.2:+65139815 MS.gene039996:CDS
TACAAAATATGCTTGATGGA+GGG 0.564237 3.2:+65139574 MS.gene039996:CDS
TGCATTGGCCGCCTGAACGA+TGG 0.564565 3.2:+65138665 MS.gene039996:CDS
CATATGGAGCTAGAGGAACT+GGG 0.567576 3.2:+65139640 MS.gene039996:CDS
GGAGGAGGTGAAGAAGATAG+AGG 0.570113 3.2:+65137826 MS.gene039996:CDS
AACGGTTGTTAAACCGGAGG+AGG 0.570414 3.2:+65137811 MS.gene039996:CDS
AAGAAGTTCTGCAATACCTC+CGG 0.571472 3.2:-65140628 None:intergenic
CTCGGGTTATGAATGCTGCT+GGG 0.571983 3.2:+65139832 MS.gene039996:CDS
TTACAAAATATGCTTGATGG+AGG 0.573219 3.2:+65139573 MS.gene039996:CDS
TACTCCTGCCATCGTTCAGG+CGG 0.574643 3.2:-65138673 None:intergenic
TAGCAGAAATTGCTTTGACC+GGG 0.576460 3.2:+65139800 MS.gene039996:CDS
AAGCTCATATCTATCTGCAC+AGG 0.578491 3.2:+65139512 MS.gene039996:CDS
TGCTTGTGGTACTCCACTGA+AGG 0.579264 3.2:+65138741 MS.gene039996:CDS
CGGAGGTGGAAGATGAGTCT+GGG 0.579331 3.2:-65137534 None:intergenic
GGTCTTTGTAACTTGCAGTC+CGG 0.579868 3.2:-65143381 None:intergenic
AAATTTGAACATACCTTCAG+TGG 0.581152 3.2:-65138754 None:intergenic
AGACAGTTCATTCGCCGTGA+GGG 0.581170 3.2:+65139729 MS.gene039996:CDS
TGATTTGGAGAATCTGATGT+AGG 0.581495 3.2:-65143335 None:intergenic
TTTGGTGGTCTAAAACTCGC+TGG 0.583586 3.2:+65141138 MS.gene039996:CDS
TGAAAGTAAGTCACGTGCGG+CGG 0.586751 3.2:-65137482 None:intergenic
TGATTTGGAGAATCTGATGA+AGG 0.587198 3.2:-65143419 None:intergenic
TCCAAGCAGAAGGGATTAGT+GGG 0.588891 3.2:+65139364 MS.gene039996:CDS
GCTATCTTATGCAACTCTAC+CGG 0.590768 3.2:+65143362 MS.gene039996:CDS
TCTATCTGCACAGGCTAGAG+TGG 0.591577 3.2:+65139521 MS.gene039996:CDS
GATATGAAGCCTGAACCGGC+TGG 0.591682 3.2:-65139420 None:intergenic
CGTCGCCGCAGAAAGAAGAA+AGG 0.594142 3.2:-65137735 None:intergenic
GGAATCCGTCTTGTTGCTTG+TGG 0.594184 3.2:+65138727 MS.gene039996:CDS
AACGGCGATAGGTGAACCGT+TGG 0.596522 3.2:+65137880 MS.gene039996:CDS
TGTGCAGATAGATATGAGCT+TGG 0.597352 3.2:-65139510 None:intergenic
CGCAATTGACTCATCAGCAT+AGG 0.597542 3.2:-65141001 None:intergenic
AAGATGAGTCTGGGAAGGTA+CGG 0.598763 3.2:-65137525 None:intergenic
GCATTTCAAAAGAACCCAGT+GGG 0.600369 3.2:+65141075 MS.gene039996:CDS
TTGACTCATCAGCATAGGAA+AGG 0.600777 3.2:-65140996 None:intergenic
TCACTAACAAACAGATTGCA+AGG 0.600933 3.2:+65141244 MS.gene039996:CDS
CATGTCACATATGGAGCTAG+AGG 0.602908 3.2:+65139633 MS.gene039996:CDS
TTCTGCGGCGACGACAAGGG+CGG 0.603218 3.2:+65137745 MS.gene039996:CDS
GGAGGTGAAGAAGATAGAGG+AGG 0.603634 3.2:+65137829 MS.gene039996:CDS
CAATTCTTACTGGGGAACGC+AGG 0.606143 3.2:+65142176 MS.gene039996:CDS
TCAAAGCAATTTCTGCTACA+GGG 0.606508 3.2:-65139795 None:intergenic
TTGGCGATAGGGAAAGAGAG+AGG 0.610708 3.2:+65137899 MS.gene039996:CDS
TTGTTGATTTCTTCACAGTG+TGG 0.614872 3.2:+65140950 MS.gene039996:CDS
GTCGAGGATATATGATGCAA+CGG 0.620249 3.2:+65137862 MS.gene039996:CDS
TGTTAGCTGCGGTGATGGAG+AGG 0.620468 3.2:-65137604 None:intergenic
CGACGCCGTTGTTTCCGTCG+TGG 0.620705 3.2:-65137637 None:intergenic
TGGCGATAGGGAAAGAGAGA+GGG 0.621244 3.2:+65137900 MS.gene039996:CDS
AAGAAGAAAGGAAGCTCCAG+CGG 0.626670 3.2:-65137723 None:intergenic
GATAAAGGAGAATACGGTGT+CGG 0.626733 3.2:+65137781 MS.gene039996:CDS
GCAGTCCAGTAGAGCGTGCG+AGG 0.627373 3.2:-65143283 None:intergenic
GCGCCATCAACACTCCTCGC+CGG 0.627563 3.2:-65137691 None:intergenic
AACAATACCGAACACCACGA+CGG 0.629518 3.2:+65137623 MS.gene039996:CDS
AGTCACAACTATCAACATAC+CGG 0.634556 3.2:-65139601 None:intergenic
TAAGGACTGTCCAAGCAGAA+GGG 0.637036 3.2:+65139355 MS.gene039996:CDS
GAACACCACGACGGAAACAA+CGG 0.638488 3.2:+65137632 MS.gene039996:CDS
AGGGATTAGTGGGCTAACAA+AGG 0.639086 3.2:+65139374 MS.gene039996:CDS
TATTAGCACAGTATCAGAAG+CGG 0.643218 3.2:+65140869 MS.gene039996:CDS
GGTGGAAGATGAGTCTGGGA+AGG 0.644361 3.2:-65137530 None:intergenic
TGGCCAACTAACCTGTGGGA+GGG 0.648648 3.2:-65139868 None:intergenic
TAACCCGAGCAATCTCAACC+CGG 0.649576 3.2:-65139818 None:intergenic
ATGGCCAACTAACCTGTGGG+AGG 0.651841 3.2:-65139869 None:intergenic
ATGCTAGAGTTGTGTATTTG+GGG 0.654997 3.2:+65137945 MS.gene039996:CDS
CGGTGATGGAGAGGTTGACA+CGG 0.659005 3.2:-65137595 None:intergenic
GTTATTACGGACACTGTCAG+AGG 0.660546 3.2:+65140922 MS.gene039996:CDS
GGTATGTTGATAGTTGTGAC+TGG 0.667974 3.2:+65139603 MS.gene039996:CDS
GAGTACCACAAGCAACAAGA+CGG 0.670544 3.2:-65138732 None:intergenic
AAGACAGTTCATTCGCCGTG+AGG 0.674905 3.2:+65139728 MS.gene039996:CDS
AGCAACGGTTGTTAAACCGG+AGG 0.682945 3.2:+65137808 MS.gene039996:CDS
TTTGGAGAATCTGATGTAGG+TGG 0.683114 3.2:-65143332 None:intergenic
TGATATGCAGATAATTGCTG+GGG 0.689345 3.2:+65142074 MS.gene039996:intron
GTGTTCGGTATTGTTAGCTG+CGG 0.690961 3.2:-65137615 None:intergenic
CGGACAATCAATTCTTACTG+GGG 0.691240 3.2:+65142168 MS.gene039996:CDS
CACAACTATCAACATACCGG+TGG 0.692061 3.2:-65139598 None:intergenic
CAACAGGAACTTCTCCCTCA+CGG 0.692731 3.2:-65139743 None:intergenic
CGGTGAAAGTAAGTCACGTG+CGG 0.694390 3.2:-65137485 None:intergenic
ATATGGAGCTAGAGGAACTG+GGG 0.700000 3.2:+65139641 MS.gene039996:CDS
TCTTGGTTTAGTATCACCGG+AGG 0.703286 3.2:+65140612 MS.gene039996:CDS
CCAGTACGAAGCAACCGGCG+AGG 0.704719 3.2:+65137677 MS.gene039996:CDS
ATGAAGCCTGAACCGGCTGG+AGG 0.705896 3.2:-65139417 None:intergenic
TTTGGAGAATCTGATGAAGG+TGG 0.706792 3.2:-65143416 None:intergenic
TGCATTTCAAAAGAACCCAG+TGG 0.707372 3.2:+65141074 MS.gene039996:CDS
AGGAGGAAGTGATAACGTCG+AGG 0.707415 3.2:+65137846 MS.gene039996:CDS
TGCTAGAGTTGTGTATTTGG+GGG 0.710856 3.2:+65137946 MS.gene039996:CDS
ATTTCTGCTACAGGGTCTGG+CGG 0.715985 3.2:-65139787 None:intergenic
TGATGGAGAGGTTGACACGG+CGG 0.731595 3.2:-65137592 None:intergenic
TGAGTGAGTTCTGAAAGCAG+AGG 0.753513 3.2:-65140667 None:intergenic
CATTTCAAAAGAACCCAGTG+GGG 0.761830 3.2:+65141076 MS.gene039996:CDS
CGGCACGTGAGACAGTTACG+CGG 0.785215 3.2:-65137505 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTCAAATCTAATTTTT+TGG + chr3.2:65143236-65143255 MS.gene039996:intron 10.0%
!! AATTTAATTATCATGATAAG+CGG + chr3.2:65138192-65138211 MS.gene039996:intron 15.0%
!! ATATACAAATTTCTCATTAA+AGG + chr3.2:65142969-65142988 MS.gene039996:intron 15.0%
!! CAGAAAAAATAATTCATAAA+AGG - chr3.2:65140040-65140059 None:intergenic 15.0%
!! GGTTATTTAAATTTAATACA+TGG + chr3.2:65142712-65142731 MS.gene039996:intron 15.0%
!!! TCATGATAATTAAATTGTTT+TGG - chr3.2:65138188-65138207 None:intergenic 15.0%
!!! TTAAAATTTTAAAATCCTTG+TGG - chr3.2:65138957-65138976 None:intergenic 15.0%
!!! TTATGAATTATTTTTTCTGT+AGG + chr3.2:65140041-65140060 MS.gene039996:intron 15.0%
!!! TTCAATGTTTTAAATTTGTT+GGG + chr3.2:65139184-65139203 MS.gene039996:intron 15.0%
!! AAAAACCTAATCTATGAATT+AGG + chr3.2:65138998-65139017 MS.gene039996:intron 20.0%
!! AAAAACCTAATTCATAGATT+AGG - chr3.2:65139006-65139025 None:intergenic 20.0%
!! AAATTACTTATCAAACATAC+AGG - chr3.2:65143110-65143129 None:intergenic 20.0%
!! AAGTACAACAAATTATACAT+TGG + chr3.2:65142589-65142608 MS.gene039996:intron 20.0%
!! ACTTAATAAGCACTTAATTA+AGG - chr3.2:65138244-65138263 None:intergenic 20.0%
!! AGTACAACAAATTATACATT+GGG + chr3.2:65142590-65142609 MS.gene039996:intron 20.0%
!! ATGAGAAATTTGTATATGAA+AGG - chr3.2:65142966-65142985 None:intergenic 20.0%
!! ATTATTGCTGAATTTAATGT+GGG + chr3.2:65141592-65141611 MS.gene039996:intron 20.0%
!! CATATTTACAAGAAATGTTT+GGG - chr3.2:65142133-65142152 None:intergenic 20.0%
!! CTCTAAGTTAAAATTTAACA+TGG - chr3.2:65142995-65143014 None:intergenic 20.0%
!! GGTCTATTATTTAATCTTTA+TGG - chr3.2:65138936-65138955 None:intergenic 20.0%
!! TAAAGGATGATTACATTAAA+GGG - chr3.2:65140512-65140531 None:intergenic 20.0%
!! TATTATTGCTGAATTTAATG+TGG + chr3.2:65141591-65141610 MS.gene039996:intron 20.0%
!! TCAAAAAATACAAATTTACC+TGG - chr3.2:65140699-65140718 None:intergenic 20.0%
!! TTGTTCATGAAAAAAACTTA+TGG - chr3.2:65138285-65138304 None:intergenic 20.0%
!!! AACATGATTATATTTCCTTT+TGG + chr3.2:65140563-65140582 MS.gene039996:intron 20.0%
!!! AATAAGAGCATAACAAAAAT+CGG - chr3.2:65138438-65138457 None:intergenic 20.0%
!!! AATTTATGTTTCTTTTACCT+TGG + chr3.2:65138514-65138533 MS.gene039996:intron 20.0%
!!! ATTGACTTTCCTTTAATTTA+AGG - chr3.2:65143051-65143070 None:intergenic 20.0%
!!! CTAAGACACTTTTTATTATT+GGG - chr3.2:65141694-65141713 None:intergenic 20.0%
!!! GAATTTTGAAAATGATCAAA+AGG - chr3.2:65142234-65142253 None:intergenic 20.0%
!!! GCATTTTTCCTTTAAATTAT+TGG - chr3.2:65141534-65141553 None:intergenic 20.0%
!!! GTTCAATGTTTTAAATTTGT+TGG + chr3.2:65139183-65139202 MS.gene039996:intron 20.0%
!!! TAATTTGTTGTACTTTACAT+TGG - chr3.2:65142584-65142603 None:intergenic 20.0%
!!! TAGGTTTTTCATAATATTTG+AGG + chr3.2:65139017-65139036 MS.gene039996:intron 20.0%
!!! TCTAAGACACTTTTTATTAT+TGG - chr3.2:65141695-65141714 None:intergenic 20.0%
!!! TGCTTACTATTAATTTTTCA+AGG + chr3.2:65142854-65142873 MS.gene039996:intron 20.0%
!!! TTGACTTTCCTTTAATTTAA+GGG - chr3.2:65143050-65143069 None:intergenic 20.0%
!!! TTTTTCTTTTCCTTAAATGT+TGG + chr3.2:65140204-65140223 MS.gene039996:intron 20.0%
! AAAAAGACGTAAAAGAAGAT+TGG + chr3.2:65141381-65141400 MS.gene039996:intron 25.0%
! AAACAGAAACATCAAGTAAA+AGG - chr3.2:65140099-65140118 None:intergenic 25.0%
! AAACCAAGATAAGCATAATT+TGG + chr3.2:65143166-65143185 MS.gene039996:intron 25.0%
! AACTTCAGTATTAATACAGA+AGG - chr3.2:65142044-65142063 None:intergenic 25.0%
! AATACAAATTTACCTGGAAA+CGG - chr3.2:65140693-65140712 None:intergenic 25.0%
! AATCCAAATTATGCTTATCT+TGG - chr3.2:65143172-65143191 None:intergenic 25.0%
! AATTACGACAATAAAGTTGA+AGG + chr3.2:65143068-65143087 MS.gene039996:intron 25.0%
! ACAAAAATCGGAAATTATCA+TGG - chr3.2:65138426-65138445 None:intergenic 25.0%
! ACTTGATATCCGAAAATTAT+AGG - chr3.2:65142302-65142321 None:intergenic 25.0%
! AGATCAGATAATATGTTGAA+AGG + chr3.2:65139117-65139136 MS.gene039996:intron 25.0%
! AGATTAAATAATAGACCACA+AGG + chr3.2:65138939-65138958 MS.gene039996:intron 25.0%
! ATCCTTAAAAAGTGATTTAG+AGG + chr3.2:65142797-65142816 MS.gene039996:intron 25.0%
! ATCTATTCCCCTTAAATTAA+AGG + chr3.2:65143039-65143058 MS.gene039996:intron 25.0%
! ATCTTACAAAATATGCTTGA+TGG + chr3.2:65139570-65139589 MS.gene039996:CDS 25.0%
! ATGACTCACCAATAATTTAA+AGG + chr3.2:65141523-65141542 MS.gene039996:intron 25.0%
! ATGTGAACTTAATATTGGAA+GGG + chr3.2:65142502-65142521 MS.gene039996:intron 25.0%
! ATTAAATATTCCCAACTTCA+GGG + chr3.2:65142900-65142919 MS.gene039996:intron 25.0%
! ATTAAGGCAATTGTTAAAGA+AGG - chr3.2:65142658-65142677 None:intergenic 25.0%
! ATTACGACAATAAAGTTGAA+GGG + chr3.2:65143069-65143088 MS.gene039996:intron 25.0%
! ATTAGAGAACTAATGTTATC+AGG - chr3.2:65141027-65141046 None:intergenic 25.0%
! CTAAAGGATGATTACATTAA+AGG - chr3.2:65140513-65140532 None:intergenic 25.0%
! CTTGATATCCGAAAATTATA+GGG - chr3.2:65142301-65142320 None:intergenic 25.0%
! GATCAGATAATATGTTGAAA+GGG + chr3.2:65139118-65139137 MS.gene039996:intron 25.0%
! GCATATTTACAAGAAATGTT+TGG - chr3.2:65142134-65142153 None:intergenic 25.0%
! GTACAACAAATTATACATTG+GGG + chr3.2:65142591-65142610 MS.gene039996:intron 25.0%
! GTAGTATGTGAACTTAATAT+TGG + chr3.2:65142497-65142516 MS.gene039996:intron 25.0%
! GTTAAAGAAGGATTCAAAAA+TGG - chr3.2:65142646-65142665 None:intergenic 25.0%
! TATGTGAACTTAATATTGGA+AGG + chr3.2:65142501-65142520 MS.gene039996:intron 25.0%
! TGTGTCAATAATCATATACT+GGG - chr3.2:65141408-65141427 None:intergenic 25.0%
! TTCTTTAACAATTGCCTTAA+TGG + chr3.2:65142657-65142676 MS.gene039996:intron 25.0%
! TTGTAAAGAATTTGCATAAG+CGG + chr3.2:65138017-65138036 MS.gene039996:CDS 25.0%
!! AATAGATGCTCTAAGTTAAA+AGG - chr3.2:65143003-65143022 None:intergenic 25.0%
!! AATTTAAAACATTGAACGCA+AGG - chr3.2:65139180-65139199 None:intergenic 25.0%
!! AATTTTCTTGATATTCTTGC+AGG - chr3.2:65139669-65139688 None:intergenic 25.0%
!! ATATGCTATCTTTTGTATCA+CGG + chr3.2:65142148-65142167 MS.gene039996:CDS 25.0%
!! ATCAAGCATATTTTGTAAGA+TGG - chr3.2:65139571-65139590 None:intergenic 25.0%
!! ATTTGAGGATATTTTCTTTC+TGG + chr3.2:65141924-65141943 MS.gene039996:intron 25.0%
!! CAATTTTGTATCACCAAAAT+GGG - chr3.2:65139980-65139999 None:intergenic 25.0%
!! GATAACATTAGTTCTCTAAT+AGG + chr3.2:65141027-65141046 MS.gene039996:CDS 25.0%
!! GTATCTTTAAAAACTAGTTG+TGG + chr3.2:65141491-65141510 MS.gene039996:intron 25.0%
!! GTTGGATTTATTTCAAGTAT+TGG + chr3.2:65141162-65141181 MS.gene039996:CDS 25.0%
!! TCAATTTTGTATCACCAAAA+TGG - chr3.2:65139981-65140000 None:intergenic 25.0%
!! TGACTTTCCTTTAATTTAAG+GGG - chr3.2:65143049-65143068 None:intergenic 25.0%
!! TGTTTGAACCCTATAATTTT+CGG + chr3.2:65142290-65142309 MS.gene039996:intron 25.0%
!! TTATCCATATACTGATTAAG+TGG - chr3.2:65138106-65138125 None:intergenic 25.0%
!!! ACATTGATTCCAAGTATTTA+GGG + chr3.2:65140371-65140390 MS.gene039996:intron 25.0%
!!! CAACTAGTTTTTAAAGATAC+AGG - chr3.2:65141491-65141510 None:intergenic 25.0%
!!! CATTATCTTCTGAAATTTTC+TGG + chr3.2:65138809-65138828 MS.gene039996:intron 25.0%
!!! GTGAAGATTATTTTTTCACT+TGG + chr3.2:65142615-65142634 MS.gene039996:intron 25.0%
!!! TACATTGATTCCAAGTATTT+AGG + chr3.2:65140370-65140389 MS.gene039996:intron 25.0%
!!! TACCTCTAAATCACTTTTTA+AGG - chr3.2:65142802-65142821 None:intergenic 25.0%
!!! TTAGTTTTGTGATAGAAAGA+GGG + chr3.2:65142452-65142471 MS.gene039996:intron 25.0%
!!! TTTAGTTTTGTGATAGAAAG+AGG + chr3.2:65142451-65142470 MS.gene039996:intron 25.0%
!!! TTTTACTTGATGTTTCTGTT+TGG + chr3.2:65140098-65140117 MS.gene039996:intron 25.0%
AAATCTGATGATTAGGTAGT+TGG + chr3.2:65140441-65140460 MS.gene039996:intron 30.0%
AAATTTGAACATACCTTCAG+TGG - chr3.2:65138757-65138776 None:intergenic 30.0%
AAGAGCTTATTGAAATACAC+TGG + chr3.2:65138310-65138329 MS.gene039996:intron 30.0%
AAGCTAATAAGTGAACGAAA+TGG - chr3.2:65139891-65139910 None:intergenic 30.0%
AATCTCACTTCCAACATTTA+AGG - chr3.2:65140217-65140236 None:intergenic 30.0%
AATCTGATGATTAGGTAGTT+GGG + chr3.2:65140442-65140461 MS.gene039996:intron 30.0%
AATGCTAGAGTTGTGTATTT+GGG + chr3.2:65137944-65137963 MS.gene039996:CDS 30.0%
AATGTAATCATCCTTTAGAC+AGG + chr3.2:65140515-65140534 MS.gene039996:intron 30.0%
AATTATACCCCCTAAATACT+TGG - chr3.2:65140383-65140402 None:intergenic 30.0%
AGAGCTTGACTATGTTATTA+CGG + chr3.2:65140909-65140928 MS.gene039996:CDS 30.0%
AGATTAAAATGGTAAGCACT+TGG + chr3.2:65138908-65138927 MS.gene039996:intron 30.0%
ATAAAGGGCTTAAATTTGGA+AGG - chr3.2:65139945-65139964 None:intergenic 30.0%
ATCTTTGTATGACTTGATCT+AGG - chr3.2:65139297-65139316 None:intergenic 30.0%
ATGCATTGTATAAGACTTCA+AGG - chr3.2:65138650-65138669 None:intergenic 30.0%
ATTCCATAACAAGATCTCTT+AGG - chr3.2:65142544-65142563 None:intergenic 30.0%
CAATAGATAAATAGCAACCA+AGG - chr3.2:65138534-65138553 None:intergenic 30.0%
CAATATATGATCTAAGGACT+TGG + chr3.2:65140247-65140266 MS.gene039996:intron 30.0%
CAGTATATGATTATTGACAC+AGG + chr3.2:65141407-65141426 MS.gene039996:intron 30.0%
CATTAAATATTCCCAACTTC+AGG + chr3.2:65142899-65142918 MS.gene039996:intron 30.0%
CGTTCATATGAAAATGTGTA+TGG + chr3.2:65142373-65142392 MS.gene039996:intron 30.0%
CTGTGTCAATAATCATATAC+TGG - chr3.2:65141409-65141428 None:intergenic 30.0%
GATATTTACCATACTGCATA+AGG - chr3.2:65139086-65139105 None:intergenic 30.0%
GCAACCAAAAATTCCAATTT+AGG + chr3.2:65142007-65142026 MS.gene039996:intron 30.0%
GCACAACAATATATGATCTA+AGG + chr3.2:65140241-65140260 MS.gene039996:intron 30.0%
GTAAATGAGTCTCACAAATA+AGG - chr3.2:65141644-65141663 None:intergenic 30.0%
GTTCTCTAAATACCTGATAA+CGG - chr3.2:65141329-65141348 None:intergenic 30.0%
TAAAGGGCTTAAATTTGGAA+GGG - chr3.2:65139944-65139963 None:intergenic 30.0%
TAAGATAAACTTGACTGTCA+TGG + chr3.2:65138607-65138626 MS.gene039996:intron 30.0%
TACAAAATATGCTTGATGGA+GGG + chr3.2:65139574-65139593 MS.gene039996:CDS 30.0%
TAGGAAAGGAATGATAAAGT+TGG - chr3.2:65140985-65141004 None:intergenic 30.0%
TATATGAAAGGAGATAGTGT+TGG - chr3.2:65142954-65142973 None:intergenic 30.0%
TCATATGAAAATGTGTATGG+TGG + chr3.2:65142376-65142395 MS.gene039996:intron 30.0%
TCTAGCAATGACAAAAATAC+AGG - chr3.2:65138560-65138579 None:intergenic 30.0%
TGACTTACCCTAGATTAAAA+TGG + chr3.2:65138897-65138916 MS.gene039996:intron 30.0%
TGAGATTATTTCATCACTCT+CGG + chr3.2:65140744-65140763 MS.gene039996:intron 30.0%
TTACAAAATATGCTTGATGG+AGG + chr3.2:65139573-65139592 MS.gene039996:CDS 30.0%
TTATAGGGTTCAAACACAAT+CGG - chr3.2:65142286-65142305 None:intergenic 30.0%
TTCTGTAGGCAATATAACTT+TGG + chr3.2:65140055-65140074 MS.gene039996:intron 30.0%
TTGATATGCAGATAATTGCT+GGG + chr3.2:65142073-65142092 MS.gene039996:intron 30.0%
TTTATCTTCGGTTTCAACAT+AGG + chr3.2:65142691-65142710 MS.gene039996:intron 30.0%
TTTCTCATCAACAGATCTTA+AGG + chr3.2:65139337-65139356 MS.gene039996:intron 30.0%
TTTGATATGCAGATAATTGC+TGG + chr3.2:65142072-65142091 MS.gene039996:intron 30.0%
! ACAGGACAAATTTTGCAATT+TGG + chr3.2:65141425-65141444 MS.gene039996:intron 30.0%
! ATTGATTCCAAGTATTTAGG+GGG + chr3.2:65140373-65140392 MS.gene039996:intron 30.0%
! CAAAACAATTCTCTCTTTTG+AGG - chr3.2:65143146-65143165 None:intergenic 30.0%
! CAAAAGGGTGAACATAATTT+TGG + chr3.2:65139053-65139072 MS.gene039996:intron 30.0%
! CAGACCTAAATTGGAATTTT+TGG - chr3.2:65142014-65142033 None:intergenic 30.0%
! CAGTGGTAACTAGTTTAAAT+TGG + chr3.2:65140413-65140432 MS.gene039996:intron 30.0%
! CATATTTTGTAAGATGGTCT+GGG - chr3.2:65139565-65139584 None:intergenic 30.0%
! GACTTGGACTTTAAACTTTT+GGG + chr3.2:65140263-65140282 MS.gene039996:intron 30.0%
! GTTCACCCTTTTGTTAAATT+CGG - chr3.2:65139046-65139065 None:intergenic 30.0%
! TGAAGTCTTATACAATGCAT+TGG + chr3.2:65138650-65138669 MS.gene039996:CDS 30.0%
! TGTTGATAAGCGATTATCTT+TGG + chr3.2:65138048-65138067 MS.gene039996:CDS 30.0%
! TGTTTGTTAGTGATAATTGC+TGG - chr3.2:65141237-65141256 None:intergenic 30.0%
! TTCACCCTTTTGTTAAATTC+GGG - chr3.2:65139045-65139064 None:intergenic 30.0%
!! AGTGCTTACCATTTTAATCT+AGG - chr3.2:65138908-65138927 None:intergenic 30.0%
!! CATTGATTCCAAGTATTTAG+GGG + chr3.2:65140372-65140391 MS.gene039996:intron 30.0%
!! CTTGGTTGCTATTTATCTAT+TGG + chr3.2:65138532-65138551 MS.gene039996:intron 30.0%
!! GTGCTTACCATTTTAATCTA+GGG - chr3.2:65138907-65138926 None:intergenic 30.0%
!!! GTTGTTTATGCACTTTTTCT+TGG + chr3.2:65141288-65141307 MS.gene039996:CDS 30.0%
!!! TAGTTTTGTGATAGAAAGAG+GGG + chr3.2:65142453-65142472 MS.gene039996:intron 30.0%
!!! TATCTTCTGAAATTTTCTGG+TGG + chr3.2:65138812-65138831 MS.gene039996:intron 30.0%
!!! TCTTTTGAAATGCATTGTCA+GGG - chr3.2:65141068-65141087 None:intergenic 30.0%
!!! TTATATTTCCTTTTGGCTTC+AGG + chr3.2:65140570-65140589 MS.gene039996:intron 30.0%
!!! TTCTTTTGAAATGCATTGTC+AGG - chr3.2:65141069-65141088 None:intergenic 30.0%
AAAGGGCTTAAATTTGGAAG+GGG - chr3.2:65139943-65139962 None:intergenic 35.0%
AATTCCTTATCATCTCGAAC+CGG - chr3.2:65137986-65138005 None:intergenic 35.0%
ACAAAATATGCTTGATGGAG+GGG + chr3.2:65139575-65139594 MS.gene039996:CDS 35.0%
ACGGACAATCAATTCTTACT+GGG + chr3.2:65142167-65142186 MS.gene039996:CDS 35.0%
AGGTTCCCGAATTTAACAAA+AGG + chr3.2:65139037-65139056 MS.gene039996:intron 35.0%
AGTCACAACTATCAACATAC+CGG - chr3.2:65139604-65139623 None:intergenic 35.0%
AGTTCTCTAATAGGACTTCT+TGG + chr3.2:65141036-65141055 MS.gene039996:CDS 35.0%
ATGCTAGAGTTGTGTATTTG+GGG + chr3.2:65137945-65137964 MS.gene039996:CDS 35.0%
ATTGCATCAGTTGTATTTGG+TGG + chr3.2:65141123-65141142 MS.gene039996:CDS 35.0%
CAAAGACTAGCAATAGAAGA+AGG + chr3.2:65140826-65140845 MS.gene039996:CDS 35.0%
CACTTAATTAAGGCTCTTGT+TGG - chr3.2:65138234-65138253 None:intergenic 35.0%
CATAAGATAGCAGCTTGATT+TGG - chr3.2:65143353-65143372 None:intergenic 35.0%
CATAAGATTGCAGCTTGATT+TGG - chr3.2:65143437-65143456 None:intergenic 35.0%
CGAATTGCATCAGTTGTATT+TGG + chr3.2:65141120-65141139 MS.gene039996:CDS 35.0%
CTTAGTTACTGTCGTGAAAA+TGG + chr3.2:65138706-65138725 MS.gene039996:CDS 35.0%
CTTCAAAAGGGAATTGATCT+TGG + chr3.2:65140595-65140614 MS.gene039996:CDS 35.0%
GAATGCTAGAGTTGTGTATT+TGG + chr3.2:65137943-65137962 MS.gene039996:CDS 35.0%
GCACATAAAGGGCTTAAATT+TGG - chr3.2:65139949-65139968 None:intergenic 35.0%
GGAGAAGATAAAGGAGAATA+CGG + chr3.2:65137775-65137794 MS.gene039996:CDS 35.0%
GGTTCCCGAATTTAACAAAA+GGG + chr3.2:65139038-65139057 MS.gene039996:intron 35.0%
GGTTGCAAAATCTGATGATT+AGG + chr3.2:65140434-65140453 MS.gene039996:intron 35.0%
GTATGTTGACATTTGAAAGC+AGG + chr3.2:65141456-65141475 MS.gene039996:intron 35.0%
GTGCAGATGAAGAAATAGAA+AGG - chr3.2:65141886-65141905 None:intergenic 35.0%
TAATCATCCTTTAGACAGGA+TGG + chr3.2:65140519-65140538 MS.gene039996:intron 35.0%
TACCACAAAAAATCAGCAAC+AGG - chr3.2:65139762-65139781 None:intergenic 35.0%
TATGTTGAAAGGGTGAATGA+TGG + chr3.2:65139128-65139147 MS.gene039996:intron 35.0%
TATTAGCACAGTATCAGAAG+CGG + chr3.2:65140869-65140888 MS.gene039996:CDS 35.0%
TCAAAGCAATTTCTGCTACA+GGG - chr3.2:65139798-65139817 None:intergenic 35.0%
TCACGACAGTAACTAAGAAT+AGG - chr3.2:65138703-65138722 None:intergenic 35.0%
TCACTAACAAACAGATTGCA+AGG + chr3.2:65141244-65141263 MS.gene039996:CDS 35.0%
TGAACGCTTGATTGTGAAAT+TGG - chr3.2:65142359-65142378 None:intergenic 35.0%
TGAATGATGGCAAGAGAATT+AGG + chr3.2:65139141-65139160 MS.gene039996:intron 35.0%
TGATATGCAGATAATTGCTG+GGG + chr3.2:65142074-65142093 MS.gene039996:intron 35.0%
TGATCTTGGTTTAGTATCAC+CGG + chr3.2:65140609-65140628 MS.gene039996:CDS 35.0%
TGGTGAAATGTTAATTGACG+TGG + chr3.2:65140118-65140137 MS.gene039996:intron 35.0%
TGTGAGACTCATTTACAAAG+TGG + chr3.2:65141648-65141667 MS.gene039996:intron 35.0%
TTGCAACTTACAATCCTTCA+GGG + chr3.2:65141803-65141822 MS.gene039996:intron 35.0%
! ACTTTTAATCTCATCGATGC+TGG - chr3.2:65143477-65143496 None:intergenic 35.0%
! GCATATTTTGTAAGATGGTC+TGG - chr3.2:65139566-65139585 None:intergenic 35.0%
! GGACTTGGACTTTAAACTTT+TGG + chr3.2:65140262-65140281 MS.gene039996:intron 35.0%
! TGATTTGGAGAATCTGATGA+AGG - chr3.2:65143422-65143441 None:intergenic 35.0%
! TGATTTGGAGAATCTGATGT+AGG - chr3.2:65143338-65143357 None:intergenic 35.0%
!! AGATAGTGTTGGTGAAATAC+GGG - chr3.2:65142943-65142962 None:intergenic 35.0%
!! GAGATAGTGTTGGTGAAATA+CGG - chr3.2:65142944-65142963 None:intergenic 35.0%
!! TGGACTTTAAACTTTTGGGA+TGG + chr3.2:65140267-65140286 MS.gene039996:intron 35.0%
!! TTGTTGATTTCTTCACAGTG+TGG + chr3.2:65140950-65140969 MS.gene039996:CDS 35.0%
!!! AATTGTCGGAGTTTTTGGTT+CGG - chr3.2:65137557-65137576 None:intergenic 35.0%
!!! ACAACTGCTGTTTTGAGTAT+CGG - chr3.2:65141273-65141292 None:intergenic 35.0%
!!! GGACTTTAAACTTTTGGGAT+GGG + chr3.2:65140268-65140287 MS.gene039996:intron 35.0%
!!! TTCCTGTTGCTGATTTTTTG+TGG + chr3.2:65139757-65139776 MS.gene039996:CDS 35.0%
!!! TTTTCTGGTGGTGGTTAATT+AGG + chr3.2:65138824-65138843 MS.gene039996:intron 35.0%
AAAGAGGGGAAATTCACTTC+TGG + chr3.2:65142467-65142486 MS.gene039996:intron 40.0%
AAATTATATGCACCTCCAGC+CGG + chr3.2:65139405-65139424 MS.gene039996:CDS 40.0%
AAGAAGTTCTGCAATACCTC+CGG - chr3.2:65140631-65140650 None:intergenic 40.0%
AAGCTCATATCTATCTGCAC+AGG + chr3.2:65139512-65139531 MS.gene039996:CDS 40.0%
AAGGGCTTAAATTTGGAAGG+GGG - chr3.2:65139942-65139961 None:intergenic 40.0%
AGATATGAGCTTGGACCAAA+AGG - chr3.2:65139504-65139523 None:intergenic 40.0%
AGCTTCCTTTCTTCTTTCTG+CGG + chr3.2:65137730-65137749 MS.gene039996:CDS 40.0%
AGGATGGTGTCTGCTATTAT+TGG + chr3.2:65140535-65140554 MS.gene039996:intron 40.0%
AGTCCATATTTCCCTGAAGT+TGG - chr3.2:65142914-65142933 None:intergenic 40.0%
ATAAACTTGACTGTCATGGC+AGG + chr3.2:65138611-65138630 MS.gene039996:intron 40.0%
ATATATGATGCAACGGCGAT+AGG + chr3.2:65137869-65137888 MS.gene039996:CDS 40.0%
ATCTGCAAATCTCCGTTATC+AGG + chr3.2:65141314-65141333 MS.gene039996:CDS 40.0%
CACGGACAATCAATTCTTAC+TGG + chr3.2:65142166-65142185 MS.gene039996:CDS 40.0%
CATTTCAAAAGAACCCAGTG+GGG + chr3.2:65141076-65141095 MS.gene039996:CDS 40.0%
CCAAAAGGAAACGACAGATT+TGG - chr3.2:65139489-65139508 None:intergenic 40.0%
CGGACAATCAATTCTTACTG+GGG + chr3.2:65142168-65142187 MS.gene039996:CDS 40.0%
CGTCCTAAGAGATCTTGTTA+TGG + chr3.2:65142538-65142557 MS.gene039996:intron 40.0%
CTGAAGGATTGTAAGTTGCA+AGG - chr3.2:65141804-65141823 None:intergenic 40.0%
CTTCTTGATACAGGGTTTCA+GGG + chr3.2:65140774-65140793 MS.gene039996:intron 40.0%
CTTGCAACTTACAATCCTTC+AGG + chr3.2:65141802-65141821 MS.gene039996:intron 40.0%
GAAACTTGCCTTATGCAGTA+TGG + chr3.2:65139075-65139094 MS.gene039996:intron 40.0%
GATAAAGGAGAATACGGTGT+CGG + chr3.2:65137781-65137800 MS.gene039996:CDS 40.0%
GCATTTCAAAAGAACCCAGT+GGG + chr3.2:65141075-65141094 MS.gene039996:CDS 40.0%
GCTATCTTATGCAACTCTAC+CGG + chr3.2:65143362-65143381 MS.gene039996:CDS 40.0%
GGAGCCACTTAATCAGTATA+TGG + chr3.2:65138099-65138118 MS.gene039996:CDS 40.0%
GGTTCGAGATGATAAGGAAT+TGG + chr3.2:65137985-65138004 MS.gene039996:CDS 40.0%
GTAGCAGAAATTGCTTTGAC+CGG + chr3.2:65139799-65139818 MS.gene039996:CDS 40.0%
GTCAAAGCAATTTCTGCTAC+AGG - chr3.2:65139799-65139818 None:intergenic 40.0%
GTCCATATTTCCCTGAAGTT+GGG - chr3.2:65142913-65142932 None:intergenic 40.0%
GTCGAGGATATATGATGCAA+CGG + chr3.2:65137862-65137881 MS.gene039996:CDS 40.0%
GTCTGCTGTGTAGTTATTTG+AGG + chr3.2:65141909-65141928 MS.gene039996:intron 40.0%
GTGGGTCTCACTAAATTATG+CGG + chr3.2:65141610-65141629 MS.gene039996:intron 40.0%
TAACAATTGCCTTAATGGCC+AGG + chr3.2:65142662-65142681 MS.gene039996:intron 40.0%
TAGCAGAAATTGCTTTGACC+GGG + chr3.2:65139800-65139819 MS.gene039996:CDS 40.0%
TCTTCTTGATACAGGGTTTC+AGG + chr3.2:65140773-65140792 MS.gene039996:intron 40.0%
TGAAGCAACGGTTGTTAAAC+CGG + chr3.2:65137805-65137824 MS.gene039996:CDS 40.0%
TGCATTTCAAAAGAACCCAG+TGG + chr3.2:65141074-65141093 MS.gene039996:CDS 40.0%
TGCTAGAGTTGTGTATTTGG+GGG + chr3.2:65137946-65137965 MS.gene039996:CDS 40.0%
TGGCTTCAGGATCTTCAAAA+GGG + chr3.2:65140583-65140602 MS.gene039996:intron 40.0%
TGGGTCTCACTAAATTATGC+GGG + chr3.2:65141611-65141630 MS.gene039996:intron 40.0%
TGTGCAGATAGATATGAGCT+TGG - chr3.2:65139513-65139532 None:intergenic 40.0%
TTATTTCATCACTCTCGGTC+TGG + chr3.2:65140749-65140768 MS.gene039996:intron 40.0%
TTCCAATTTAGGTCTGCAAC+TGG + chr3.2:65142018-65142037 MS.gene039996:intron 40.0%
TTCCCAACTTCAGGGAAATA+TGG + chr3.2:65142908-65142927 MS.gene039996:intron 40.0%
TTGAAATGCATTGTCAGGGA+TGG - chr3.2:65141064-65141083 None:intergenic 40.0%
TTGAAGATCCTGAAGCCAAA+AGG - chr3.2:65140581-65140600 None:intergenic 40.0%
TTGACTCATCAGCATAGGAA+AGG - chr3.2:65140999-65141018 None:intergenic 40.0%
TTGGAAGCTTCGCTAACAAT+AGG - chr3.2:65142340-65142359 None:intergenic 40.0%
TTGGCTTCAGGATCTTCAAA+AGG + chr3.2:65140582-65140601 MS.gene039996:intron 40.0%
TTGGTAAATTGCTGCAGCAA+TGG + chr3.2:65143255-65143274 MS.gene039996:intron 40.0%
TTTGGAGAATCTGATGAAGG+TGG - chr3.2:65143419-65143438 None:intergenic 40.0%
TTTGGAGAATCTGATGTAGG+TGG - chr3.2:65143335-65143354 None:intergenic 40.0%
! CAATCGGCTTACTTAAGATG+AGG - chr3.2:65142270-65142289 None:intergenic 40.0%
! TGAAAATGTGTATGGTGGAG+TGG + chr3.2:65142381-65142400 MS.gene039996:intron 40.0%
! TGCGAAATTGTCGGAGTTTT+TGG - chr3.2:65137562-65137581 None:intergenic 40.0%
!! AGGAATGATAAAGTTGGTGC+AGG - chr3.2:65140979-65140998 None:intergenic 40.0%
!! AGGCACTGATACAAGATACA+TGG - chr3.2:65140020-65140039 None:intergenic 40.0%
!! CCAAATCTGTCGTTTCCTTT+TGG + chr3.2:65139486-65139505 MS.gene039996:CDS 40.0%
!! GCTAGTCTTTGCAAGAACTT+GGG - chr3.2:65140817-65140836 None:intergenic 40.0%
!! GGTATGTTGATAGTTGTGAC+TGG + chr3.2:65139603-65139622 MS.gene039996:CDS 40.0%
!! GTCTGGTTCTTCTTGATACA+GGG + chr3.2:65140766-65140785 MS.gene039996:intron 40.0%
!! TGCTAGTCTTTGCAAGAACT+TGG - chr3.2:65140818-65140837 None:intergenic 40.0%
!!! CTTCTGAAATTTTCTGGTGG+TGG + chr3.2:65138815-65138834 MS.gene039996:intron 40.0%
!!! GGGTTTTAGACAGAGTTGTA+TGG + chr3.2:65139204-65139223 MS.gene039996:intron 40.0%
AAACTAGTTACCACTGCCGA+TGG - chr3.2:65140409-65140428 None:intergenic 45.0%
AAATCTTCACGACAGCAGGT+TGG - chr3.2:65140154-65140173 None:intergenic 45.0%
AAATGCCAACCTGGCCATTA+AGG - chr3.2:65142674-65142693 None:intergenic 45.0%
AACAATACCGAACACCACGA+CGG + chr3.2:65137623-65137642 MS.gene039996:CDS 45.0%
AAGAAGAAAGGAAGCTCCAG+CGG - chr3.2:65137726-65137745 None:intergenic 45.0%
AAGATGAGTCTGGGAAGGTA+CGG - chr3.2:65137528-65137547 None:intergenic 45.0%
AATCTTCACGACAGCAGGTT+GGG - chr3.2:65140153-65140172 None:intergenic 45.0%
AATTGCCTTAATGGCCAGGT+TGG + chr3.2:65142666-65142685 MS.gene039996:intron 45.0%
ACATATGGAGCTAGAGGAAC+TGG + chr3.2:65139639-65139658 MS.gene039996:CDS 45.0%
ACCGAAGATAAATGCCAACC+TGG - chr3.2:65142683-65142702 None:intergenic 45.0%
AGATTCCAATTTGTCCCCAC+TGG - chr3.2:65141093-65141112 None:intergenic 45.0%
ATATGGAGCTAGAGGAACTG+GGG + chr3.2:65139641-65139660 MS.gene039996:CDS 45.0%
ATCATGGCGCAAGTGACATA+GGG - chr3.2:65138410-65138429 None:intergenic 45.0%
CAAGTGACATAGGGTGCATT+TGG - chr3.2:65138401-65138420 None:intergenic 45.0%
CACAACTATCAACATACCGG+TGG - chr3.2:65139601-65139620 None:intergenic 45.0%
CATATGGAGCTAGAGGAACT+GGG + chr3.2:65139640-65139659 MS.gene039996:CDS 45.0%
CATGTCACATATGGAGCTAG+AGG + chr3.2:65139633-65139652 MS.gene039996:CDS 45.0%
GAAATGGCCAACTAACCTGT+GGG - chr3.2:65139875-65139894 None:intergenic 45.0%
GAGTACCACAAGCAACAAGA+CGG - chr3.2:65138735-65138754 None:intergenic 45.0%
GATTCCAATTTGTCCCCACT+GGG - chr3.2:65141092-65141111 None:intergenic 45.0%
GGCGAATGAACTGTCTTTCT+GGG - chr3.2:65139725-65139744 None:intergenic 45.0%
GGGTTTCAGGGAAAGATTGT+TGG + chr3.2:65140786-65140805 MS.gene039996:intron 45.0%
GTACAAATCTTCACGACAGC+AGG - chr3.2:65140158-65140177 None:intergenic 45.0%
GTGTTCGGTATTGTTAGCTG+CGG - chr3.2:65137618-65137637 None:intergenic 45.0%
GTTATTACGGACACTGTCAG+AGG + chr3.2:65140922-65140941 MS.gene039996:CDS 45.0%
TAACCAACTTCACGCTGATG+AGG + chr3.2:65139250-65139269 MS.gene039996:intron 45.0%
TAAGGACTGTCCAAGCAGAA+GGG + chr3.2:65139355-65139374 MS.gene039996:CDS 45.0%
TATAATTGAGCCATCGGCAG+TGG + chr3.2:65140396-65140415 MS.gene039996:intron 45.0%
TATCATGGCGCAAGTGACAT+AGG - chr3.2:65138411-65138430 None:intergenic 45.0%
TCTATCTTCTTCACCTCCTC+CGG - chr3.2:65137827-65137846 None:intergenic 45.0%
TCTTAGGACGCTCTTAGACA+AGG - chr3.2:65142528-65142547 None:intergenic 45.0%
TCTTGGTTTAGTATCACCGG+AGG + chr3.2:65140612-65140631 MS.gene039996:CDS 45.0%
TTAAGGACTGTCCAAGCAGA+AGG + chr3.2:65139354-65139373 MS.gene039996:CDS 45.0%
! AGCTTTTCCTGCTGATCTTC+AGG + chr3.2:65138078-65138097 MS.gene039996:CDS 45.0%
! AGGGGGTATAATTGAGCCAT+CGG + chr3.2:65140390-65140409 MS.gene039996:intron 45.0%
! AGTTCCGGTTCGAGATGATA+AGG + chr3.2:65137979-65137998 MS.gene039996:CDS 45.0%
! CGCAATTGACTCATCAGCAT+AGG - chr3.2:65141004-65141023 None:intergenic 45.0%
! CTCTAGCTCCATATGTGACA+TGG - chr3.2:65139635-65139654 None:intergenic 45.0%
! GAAAGAGAGAGGGAAAGTGT+GGG + chr3.2:65137910-65137929 MS.gene039996:CDS 45.0%
! GCCAGGTTGGCATTTATCTT+CGG + chr3.2:65142679-65142698 MS.gene039996:intron 45.0%
! GGGCAATGAGAGCACATAAA+GGG - chr3.2:65139960-65139979 None:intergenic 45.0%
! GGTCTTTGTAACTTGCAGTC+CGG - chr3.2:65143384-65143403 None:intergenic 45.0%
! GTTTTGCGGTGCGAAATTGT+CGG - chr3.2:65137571-65137590 None:intergenic 45.0%
! TCCAAGCAGAAGGGATTAGT+GGG + chr3.2:65139364-65139383 MS.gene039996:CDS 45.0%
! TGGGCAATGAGAGCACATAA+AGG - chr3.2:65139961-65139980 None:intergenic 45.0%
! TGTGCTCTCATTGCCCATTT+TGG + chr3.2:65139964-65139983 MS.gene039996:intron 45.0%
! TTTGGTGGTCTAAAACTCGC+TGG + chr3.2:65141138-65141157 MS.gene039996:CDS 45.0%
!! AGGGATTAGTGGGCTAACAA+AGG + chr3.2:65139374-65139393 MS.gene039996:CDS 45.0%
!! GGTCTGGTTCTTCTTGATAC+AGG + chr3.2:65140765-65140784 MS.gene039996:intron 45.0%
!! TGAGTGAGTTCTGAAAGCAG+AGG - chr3.2:65140670-65140689 None:intergenic 45.0%
AACGGTTGTTAAACCGGAGG+AGG + chr3.2:65137811-65137830 MS.gene039996:CDS 50.0%
AAGACAGTTCATTCGCCGTG+AGG + chr3.2:65139728-65139747 MS.gene039996:CDS 50.0%
ACTTGACTGTCATGGCAGGA+TGG + chr3.2:65138615-65138634 MS.gene039996:intron 50.0%
AGAACCCAGTGGGGACAAAT+TGG + chr3.2:65141085-65141104 MS.gene039996:CDS 50.0%
AGAACTCACTCACCGTTTCC+AGG + chr3.2:65140678-65140697 MS.gene039996:CDS 50.0%
AGACAGTTCATTCGCCGTGA+GGG + chr3.2:65139729-65139748 MS.gene039996:CDS 50.0%
AGCAACGGTTGTTAAACCGG+AGG + chr3.2:65137808-65137827 MS.gene039996:CDS 50.0%
ATAGGTGAACCGTTGGCGAT+AGG + chr3.2:65137887-65137906 MS.gene039996:CDS 50.0%
ATTTCTGCTACAGGGTCTGG+CGG - chr3.2:65139790-65139809 None:intergenic 50.0%
CAACAGGAACTTCTCCCTCA+CGG - chr3.2:65139746-65139765 None:intergenic 50.0%
CAATTCTTACTGGGGAACGC+AGG + chr3.2:65142176-65142195 MS.gene039996:CDS 50.0%
CGAAATGGCCAACTAACCTG+TGG - chr3.2:65139876-65139895 None:intergenic 50.0%
CGGCGAATGAACTGTCTTTC+TGG - chr3.2:65139726-65139745 None:intergenic 50.0%
CGGTGAAAGTAAGTCACGTG+CGG - chr3.2:65137488-65137507 None:intergenic 50.0%
CTCGGGTTATGAATGCTGCT+GGG + chr3.2:65139832-65139851 MS.gene039996:CDS 50.0%
CTCTCTTTCCCTATCGCCAA+CGG - chr3.2:65137899-65137918 None:intergenic 50.0%
GAACACCACGACGGAAACAA+CGG + chr3.2:65137632-65137651 MS.gene039996:CDS 50.0%
GAAGCTCCAGCGGCTAAAAA+CGG - chr3.2:65137716-65137735 None:intergenic 50.0%
GAATCTGATGAAGGTGGCTC+AGG - chr3.2:65143413-65143432 None:intergenic 50.0%
GAATCTGATGTAGGTGGCTC+AGG - chr3.2:65143329-65143348 None:intergenic 50.0%
GATCCTCATCAGCGTGAAGT+TGG - chr3.2:65139256-65139275 None:intergenic 50.0%
GCAATTTCTGCTACAGGGTC+TGG - chr3.2:65139793-65139812 None:intergenic 50.0%
GCAGACACCATCCTGTCTAA+AGG - chr3.2:65140529-65140548 None:intergenic 50.0%
GCAGATAATTGCTGGGGTTG+TGG + chr3.2:65142080-65142099 MS.gene039996:intron 50.0%
GCCTGATATGAAGCCTGAAC+CGG - chr3.2:65139427-65139446 None:intergenic 50.0%
GGAAAGAGAGAGGGAAAGTG+TGG + chr3.2:65137909-65137928 MS.gene039996:CDS 50.0%
GGAGGAGGTGAAGAAGATAG+AGG + chr3.2:65137826-65137845 MS.gene039996:CDS 50.0%
GGAGGTGAAGAAGATAGAGG+AGG + chr3.2:65137829-65137848 MS.gene039996:CDS 50.0%
GGCCAGTTGCAGACCTAAAT+TGG - chr3.2:65142023-65142042 None:intergenic 50.0%
GGTATTGTTAGCTGCGGTGA+TGG - chr3.2:65137612-65137631 None:intergenic 50.0%
GGTGCAAGCCATGTCACATA+TGG + chr3.2:65139624-65139643 MS.gene039996:CDS 50.0%
GTCCAAGCAGAAGGGATTAG+TGG + chr3.2:65139363-65139382 MS.gene039996:CDS 50.0%
GTTCTCCAGTACGAAGCAAC+CGG + chr3.2:65137672-65137691 MS.gene039996:CDS 50.0%
TAACCCGAGCAATCTCAACC+CGG - chr3.2:65139821-65139840 None:intergenic 50.0%
TACAATCCTTCAGGGCTCAC+TGG + chr3.2:65141811-65141830 MS.gene039996:intron 50.0%
TAGGTGAACCGTTGGCGATA+GGG + chr3.2:65137888-65137907 MS.gene039996:CDS 50.0%
TCATACTCCTGCCATCGTTC+AGG - chr3.2:65138679-65138698 None:intergenic 50.0%
TCTATCTGCACAGGCTAGAG+TGG + chr3.2:65139521-65139540 MS.gene039996:CDS 50.0%
TGAAAGTAAGTCACGTGCGG+CGG - chr3.2:65137485-65137504 None:intergenic 50.0%
TGCTTGTGGTACTCCACTGA+AGG + chr3.2:65138741-65138760 MS.gene039996:CDS 50.0%
TGGCGATAGGGAAAGAGAGA+GGG + chr3.2:65137900-65137919 MS.gene039996:CDS 50.0%
TTGGCGATAGGGAAAGAGAG+AGG + chr3.2:65137899-65137918 MS.gene039996:CDS 50.0%
! AGGAGGAAGTGATAACGTCG+AGG + chr3.2:65137846-65137865 MS.gene039996:CDS 50.0%
! GGAATCCGTCTTGTTGCTTG+TGG + chr3.2:65138727-65138746 MS.gene039996:CDS 50.0%
! GTTGTTTCCGTCGTGGTGTT+CGG - chr3.2:65137633-65137652 None:intergenic 50.0%
! TTGACCGGGTTGAGATTGCT+CGG + chr3.2:65139814-65139833 MS.gene039996:CDS 50.0%
!! TACGGTGTCGGTTGAAGCAA+CGG + chr3.2:65137793-65137812 MS.gene039996:CDS 50.0%
!!! TGTCGGAGTTTTTGGTTCGG+AGG - chr3.2:65137554-65137573 None:intergenic 50.0%
AACGGCGATAGGTGAACCGT+TGG + chr3.2:65137880-65137899 MS.gene039996:CDS 55.0%
AGTGGCTCCTGAAGATCAGC+AGG - chr3.2:65138088-65138107 None:intergenic 55.0%
ATGCCCTCCCACAGGTTAGT+TGG + chr3.2:65139865-65139884 MS.gene039996:intron 55.0%
ATGGCCAACTAACCTGTGGG+AGG - chr3.2:65139872-65139891 None:intergenic 55.0%
ATTGACCTCGCACGCTCTAC+TGG + chr3.2:65143278-65143297 MS.gene039996:CDS 55.0%
CAGTATCCAGTGAGCCCTGA+AGG - chr3.2:65141820-65141839 None:intergenic 55.0%
CGGAGGTGGAAGATGAGTCT+GGG - chr3.2:65137537-65137556 None:intergenic 55.0%
CGTCGCCGCAGAAAGAAGAA+AGG - chr3.2:65137738-65137757 None:intergenic 55.0%
GAAAGTAAGTCACGTGCGGC+GGG - chr3.2:65137484-65137503 None:intergenic 55.0%
GACTGTCATGGCAGGATGGA+TGG + chr3.2:65138619-65138638 MS.gene039996:intron 55.0%
GATATGAAGCCTGAACCGGC+TGG - chr3.2:65139423-65139442 None:intergenic 55.0%
GCCCACTAATCCCTTCTGCT+TGG - chr3.2:65139368-65139387 None:intergenic 55.0%
GCGAAAGAAGCCTGGGCATT+GGG - chr3.2:65137455-65137474 None:intergenic 55.0%
GCTCGGGTTATGAATGCTGC+TGG + chr3.2:65139831-65139850 MS.gene039996:CDS 55.0%
GGCGGAGGAGGAGAAGATAA+AGG + chr3.2:65137766-65137785 MS.gene039996:CDS 55.0%
GGGGGAAGCTGAACAAGTTC+CGG + chr3.2:65137964-65137983 MS.gene039996:CDS 55.0%
GGTGGAAGATGAGTCTGGGA+AGG - chr3.2:65137533-65137552 None:intergenic 55.0%
TACTCCTGCCATCGTTCAGG+CGG - chr3.2:65138676-65138695 None:intergenic 55.0%
TCGGAGGTGGAAGATGAGTC+TGG - chr3.2:65137538-65137557 None:intergenic 55.0%
TCTTTCTGCGGCGACGACAA+GGG + chr3.2:65137742-65137761 MS.gene039996:CDS 55.0%
TGAAGGTGGCTCAGGTGACT+CGG - chr3.2:65143405-65143424 None:intergenic 55.0%
TGAATGCTGCTGGGCAGAGA+CGG + chr3.2:65139841-65139860 MS.gene039996:CDS 55.0%
TGATGGAGAGGTTGACACGG+CGG - chr3.2:65137595-65137614 None:intergenic 55.0%
TGGCCAACTAACCTGTGGGA+GGG - chr3.2:65139871-65139890 None:intergenic 55.0%
TGTAGGTGGCTCAGGTGACT+CGG - chr3.2:65143321-65143340 None:intergenic 55.0%
TTCTTTCTGCGGCGACGACA+AGG + chr3.2:65137741-65137760 MS.gene039996:CDS 55.0%
TTGCTGGGGTTGTGGAGCAT+CGG + chr3.2:65142088-65142107 MS.gene039996:CDS 55.0%
! GCCGGTTCAGGCTTCATATC+AGG + chr3.2:65139423-65139442 MS.gene039996:CDS 55.0%
! GGTCTAAAACTCGCTGGCGT+TGG + chr3.2:65141144-65141163 MS.gene039996:CDS 55.0%
! TGACCGGGTTGAGATTGCTC+GGG + chr3.2:65139815-65139834 MS.gene039996:CDS 55.0%
!! CGGTGATGGAGAGGTTGACA+CGG - chr3.2:65137598-65137617 None:intergenic 55.0%
!! TGTTAGCTGCGGTGATGGAG+AGG - chr3.2:65137607-65137626 None:intergenic 55.0%
!!! CGGAGTTTTTGGTTCGGAGG+TGG - chr3.2:65137551-65137570 None:intergenic 55.0%
ATGAAGCCTGAACCGGCTGG+AGG - chr3.2:65139420-65139439 None:intergenic 60.0%
ATGCTTGATGGAGGGGCCAC+CGG + chr3.2:65139582-65139601 MS.gene039996:CDS 60.0%
CGGCACGTGAGACAGTTACG+CGG - chr3.2:65137508-65137527 None:intergenic 60.0%
GAATGCTGCTGGGCAGAGAC+GGG + chr3.2:65139842-65139861 MS.gene039996:CDS 60.0%
GCCTGTGGCGAAAGAAGCCT+GGG - chr3.2:65137462-65137481 None:intergenic 60.0%
GGCGAAAGAAGCCTGGGCAT+TGG - chr3.2:65137456-65137475 None:intergenic 60.0%
! GTTGACACGGCGGCGTTTTG+CGG - chr3.2:65137585-65137604 None:intergenic 60.0%
! TATGCACCTCCAGCCGGTTC+AGG + chr3.2:65139411-65139430 MS.gene039996:CDS 60.0%
! TGCATTGGCCGCCTGAACGA+TGG + chr3.2:65138665-65138684 MS.gene039996:CDS 60.0%
!! CAACCGGCGAGGAGTGTTGA+TGG + chr3.2:65137688-65137707 MS.gene039996:CDS 60.0%
!!! ATGGCGCCGTTTTTAGCCGC+TGG + chr3.2:65137707-65137726 MS.gene039996:CDS 60.0%
CCAGTACGAAGCAACCGGCG+AGG + chr3.2:65137677-65137696 MS.gene039996:CDS 65.0%
GCAGTCCAGTAGAGCGTGCG+AGG - chr3.2:65143286-65143305 None:intergenic 65.0%
GCCCAGGCTTCTTTCGCCAC+AGG + chr3.2:65137458-65137477 MS.gene039996:CDS 65.0%
GCGCCATCAACACTCCTCGC+CGG - chr3.2:65137694-65137713 None:intergenic 65.0%
GGCCTGTGGCGAAAGAAGCC+TGG - chr3.2:65137463-65137482 None:intergenic 65.0%
TTCTGCGGCGACGACAAGGG+CGG + chr3.2:65137745-65137764 MS.gene039996:CDS 65.0%
TTGGCCGCCTGAACGATGGC+AGG + chr3.2:65138669-65138688 MS.gene039996:CDS 65.0%
! CCTCGCCGGTTGCTTCGTAC+TGG - chr3.2:65137680-65137699 None:intergenic 65.0%
! CGACGCCGTTGTTTCCGTCG+TGG - chr3.2:65137640-65137659 None:intergenic 65.0%
GAGACGGGATGCCCTCCCAC+AGG + chr3.2:65139857-65139876 MS.gene039996:CDS 70.0%
AGTCACGTGCGGCGGGCCTG+TGG - chr3.2:65137477-65137496 None:intergenic 75.0%
GACGACAAGGGCGGCGGAGG+AGG + chr3.2:65137754-65137773 MS.gene039996:CDS 75.0%
TGCGGCGACGACAAGGGCGG+CGG + chr3.2:65137748-65137767 MS.gene039996:CDS 75.0%
! GGCGACGACAAGGGCGGCGG+AGG + chr3.2:65137751-65137770 MS.gene039996:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 65137446 65143502 65137446 ID=MS.gene039996
chr3.2 mRNA 65137446 65143502 65137446 ID=MS.gene039996.t1;Parent=MS.gene039996
chr3.2 exon 65137446 65138128 65137446 ID=MS.gene039996.t1.exon1;Parent=MS.gene039996.t1
chr3.2 CDS 65137446 65138128 65137446 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65138633 65138762 65138633 ID=MS.gene039996.t1.exon2;Parent=MS.gene039996.t1
chr3.2 CDS 65138633 65138762 65138633 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65139351 65139878 65139351 ID=MS.gene039996.t1.exon3;Parent=MS.gene039996.t1
chr3.2 CDS 65139351 65139878 65139351 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65140592 65140699 65140592 ID=MS.gene039996.t1.exon4;Parent=MS.gene039996.t1
chr3.2 CDS 65140592 65140699 65140592 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65140787 65141335 65140787 ID=MS.gene039996.t1.exon5;Parent=MS.gene039996.t1
chr3.2 CDS 65140787 65141335 65140787 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65142084 65142197 65142084 ID=MS.gene039996.t1.exon6;Parent=MS.gene039996.t1
chr3.2 CDS 65142084 65142197 65142084 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
chr3.2 exon 65143272 65143502 65143272 ID=MS.gene039996.t1.exon7;Parent=MS.gene039996.t1
chr3.2 CDS 65143272 65143502 65143272 ID=cds.MS.gene039996.t1;Parent=MS.gene039996.t1
Gene Sequence

>MS.gene039996

ATGAAGCCCAATGCCCAGGCTTCTTTCGCCACAGGCCCGCCGCACGTGACTTACTTTCACCGCGTAACTGTCTCACGTGCCGTACCTTCCCAGACTCATCTTCCACCTCCGAACCAAAAACTCCGACAATTTCGCACCGCAAAACGCCGCCGTGTCAACCTCTCCATCACCGCAGCTAACAATACCGAACACCACGACGGAAACAACGGCGTCGAGCGAATAGAATGTTCTCCAGTACGAAGCAACCGGCGAGGAGTGTTGATGGCGCCGTTTTTAGCCGCTGGAGCTTCCTTTCTTCTTTCTGCGGCGACGACAAGGGCGGCGGAGGAGGAGAAGATAAAGGAGAATACGGTGTCGGTTGAAGCAACGGTTGTTAAACCGGAGGAGGTGAAGAAGATAGAGGAGGAAGTGATAACGTCGAGGATATATGATGCAACGGCGATAGGTGAACCGTTGGCGATAGGGAAAGAGAGAGGGAAAGTGTGGGAGAAGTTGATGAATGCTAGAGTTGTGTATTTGGGGGAAGCTGAACAAGTTCCGGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTAAAGAATTTGCATAAGCGGTGTGTTGATGTTGATAAGCGATTATCTTTGGCTATTGAAGCTTTTCCTGCTGATCTTCAGGAGCCACTTAATCAGTATATGGATAAAAAGTATGCATTTTAATTTATTTATCTTATGAACAGTTGAATACAGCTTATAGCTTATACCAAAACAATTTAATTATCATGATAAGCGGTAAATGAACTGTTTATCCAACAAGAGCCTTAATTAAGTGCTTATTAAGTAAACGTTTATATGATAAGCCATAAGTTTTTTTCATGAACAATCTTGAAGAGCTTATTGAAATACACTGGAAAGAGCTTATGTACACGTCATACTTGACAGTGCATAAGTTCAAATAAGTTGTTCATAAATCAATCCAAATGCACCCTATGTCACTTGCGCCATGATAATTTCCGATTTTTGTTATGCTCTTATTTTATTTTTATACTATTTTGCAGAAAGTCTTGTTATCAAAATAAGAATTCAATTATCAATTTATGTTTCTTTTACCTTGGTTGCTATTTATCTATTGGCTCCTGTATTTTTGTCATTGCTAGATTGTTTCTCACAATTCTTTGTTACTTATAAGATAAACTTGACTGTCATGGCAGGATGGATGGAGAAACCTTGAAGTCTTATACAATGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAATGGAATCCGTCTTGTTGCTTGTGGTACTCCACTGAAGGTATGTTCAAATTTTCATTCAAACTGATGTAGATTATTAACATGTTCATTATCTTCTGAAATTTTCTGGTGGTGGTTAATTAGGAGTAATAATTTAACAATATCACTGCACTAGACACTCAATGCTATGCAAAATGACTTACCCTAGATTAAAATGGTAAGCACTTGGCACCATAAAGATTAAATAATAGACCACAAGGATTTTAAAATTTTAATTGCATTATGACACTAACATGAAAAACCTAATCTATGAATTAGGTTTTTCATAATATTTGAGGTTCCCGAATTTAACAAAAGGGTGAACATAATTTTGGAAACTTGCCTTATGCAGTATGGTAAATATCATGATATGAGAAGATCAGATAATATGTTGAAAGGGTGAATGATGGCAAGAGAATTAGGAGCACTAAATAGACCTTGCGTTCAATGTTTTAAATTTGTTGGGTTTTAGACAGAGTTGTATGGTTTCAGTAGATTCATGTAAGTTGTAACCAACTTCACGCTGATGAGGATCAAGCTTGATTCTTGTATACCTAGATCAAGTCATACAAAGATGATATTTAAAAATTGACAATTTTCTCATCAACAGATCTTAAGGACTGTCCAAGCAGAAGGGATTAGTGGGCTAACAAAGGCTGAACGTAAATTATATGCACCTCCAGCCGGTTCAGGCTTCATATCAGGCTTTTCTTCTATGTCACGTAGATATTCAGCTGACAGTACTCCAAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTGGTTGACGAGTATACTATGTCCCAGACCATCTTACAAAATATGCTTGATGGAGGGGCCACCGGTATGTTGATAGTTGTGACTGGTGCAAGCCATGTCACATATGGAGCTAGAGGAACTGGGGTGCCTGCAAGAATATCAAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAAAGACAGTTCATTCGCCGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCCGCCAGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCTGGGCAGAGACGGGATGCCCTCCCACAGGTTAGTTGGCCATTTCGTTCACTTATTAGCTTGACTGTTATTTTTCTTGCTCTGTTGATTCCCCCTTCCAAATTTAAGCCCTTTATGTGCTCTCATTGCCCATTTTGGTGATACAAAATTGAGAAATTTTACATGTTACCATGTATCTTGTATCAGTGCCTTTTATGAATTATTTTTTCTGTAGGCAATATAACTTTGGTGTTTCATCATCATTTATCCTTTTACTTGATGTTTCTGTTTGGTGAAATGTTAATTGACGTGGATAATGCATCCCAACCTGCTGTCGTGAAGATTTGTACTCGAATATTGATCGTCTCATAGTACTTTTTTCTTTTCCTTAAATGTTGGAAGTGAGATTTTTTGCACAACAATATATGATCTAAGGACTTGGACTTTAAACTTTTGGGATGGGTAACTTGTGATAATGAAATATCATTTTTTGAAAAATTTCTCTAAAATTAAAGTAACTCTATTCTATAATTTAGTTTACATACATTGATTCCAAGTATTTAGGGGGTATAATTGAGCCATCGGCAGTGGTAACTAGTTTAAATTGGTTGCAAAATCTGATGATTAGGTAGTTGGGTGTTTTTAGATTTTTTTTTTTTTCTTTTCATATGCAGCTACTTACCCTTTAATGTAATCATCCTTTAGACAGGATGGTGTCTGCTATTATTGGTTGTGAACATGATTATATTTCCTTTTGGCTTCAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCGGAGGTATTGCAGAACTTCTTTGATCTAGAGAAATATCCTCTGCTTTCAGAACTCACTCACCGTTTCCAGGTAAATTTGTATTTTTTGAAAATAAAACTCTTAACTTATAATCATGAGATTATTTCATCACTCTCGGTCTGGTTCTTCTTGATACAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAGTTCTTGCAAAGACTAGCAATAGAAGAAGGAATATCAGTAACAACTACATTATTAGCACAGTATCAGAAGCGGAAAGAAAACTTCTTTCAAGAGCTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTCACAGTGTGGCTTCCTGCACCAACTTTATCATTCCTTTCCTATGCTGATGAGTCAATTGCGCCTGATAACATTAGTTCTCTAATAGGACTTCTTGGCTCCATCCCTGACAATGCATTTCAAAAGAACCCAGTGGGGACAAATTGGAATCTCAATCATCGAATTGCATCAGTTGTATTTGGTGGTCTAAAACTCGCTGGCGTTGGATTTATTTCAAGTATTGGAGCTGTTGCTTCATCAAATTCTCTGTTTGCAGTTCGTAAGTTTCTTAATCCAGCAATTATCACTAACAAACAGATTGCAAGGTCACCGATACTCAAAACAGCAGTTGTTTATGCACTTTTTCTTGGAATATCTGCAAATCTCCGTTATCAGGTATTTAGAGAACTTCTTTCTTGCACTGAATTTTTTAGTTGTAATAAAAAGACGTAAAAGAAGATTGGACCCAGTATATGATTATTGACACAGGACAAATTTTGCAATTTGGAAATTTGAGTATGTTGACATTTGAAAGCAGGACTTGATTACCTGTATCTTTAAAAACTAGTTGTGGTGTGATTTTATGACTCACCAATAATTTAAAGGAAAAATGCTAGTAACACTCTCTAACACACTCTTTTTAACATACACTATTATTGCTGAATTTAATGTGGGTCTCACTAAATTATGCGGGCTTTATTCCTTATTTGTGAGACTCATTTACAAAGTGGTGAGACTAAAATGAATTTCACCCAATAATAAAAAGTGTCTTAGAAAGAAAGTTGTAGAGAATGTGTTGCTACTTGTTAGTATTTCTACAACTAGAAATATTGTACTGTAATATAATTTGCTTTACTATCACCTTGCAACTTACAATCCTTCAGGGCTCACTGGATACTGTTAAAAAAGCATTGTGAAAAAATATCTTGTTTAATTTTCTTCTCCTTTCTATTTCTTCATCTGCACTCTGTCTGCTGTGTAGTTATTTGAGGATATTTTCTTTCTGGAAATTGCATATGTTGTATAGCTGTATTGTTAGTGATGTGATAATCTTGTACTGTAAATTTGCAACCAAAAATTCCAATTTAGGTCTGCAACTGGCCTTCTGTATTAATACTGAAGTTACAATATTTTTGATATGCAGATAATTGCTGGGGTTGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACGCAGGTAAGATACACTTTCTTATTCTATCTTGTATATCCTTTTGATCATTTTCAAAATTCTGAGTGTTCATCACCTCATCTTAAGTAAGCCGATTGTGTTTGAACCCTATAATTTTCGGATATCAAGTATATTTTTTTTCTTTCCTATTGTTAGCGAAGCTTCCAATTTCACAATCAAGCGTTCATATGAAAATGTGTATGGTGGAGTGGTAATTGTGTCTGAATGTGTATTTTTGCAAGAAAATGAATCATATAAGTTTAGTTTTGTGATAGAAAGAGGGGAAATTCACTTCTGGTTGTCTTGTAGTATGTGAACTTAATATTGGAAGGGCCTTGTCTAAGAGCGTCCTAAGAGATCTTGTTATGGAATAAACAATTAAAAAGTATCCAATGTAAAGTACAACAAATTATACATTGGGGAGTGAAGATTATTTTTTCACTTGGTATTTCCATTTTTGAATCCTTCTTTAACAATTGCCTTAATGGCCAGGTTGGCATTTATCTTCGGTTTCAACATAGGTTATTTAAATTTAATACATGGACTATGTTATTCAATATTCACAATTTCAAAGAAATGTTATTTAATGTAATTTAAAATTTTGAATCCTTAAAAAGTGATTTAGAGGTACACAGTCAAATTTGTCAGATCACAGTACATTCTGCTTACTATTAATTTTTCAAGGTTTTGTAAAAAGCTTAAGAAGTCATTAAATATTCCCAACTTCAGGGAAATATGGACTCTTACTCCCGTATTTCACCAACACTATCTCCTTTCATATACAAATTTCTCATTAAAGGCCATGTTAAATTTTAACTTAGAGCATCTATTCCTTTTAACTTAGAGCATCTATTCCCCTTAAATTAAAGGAAAGTCAATTACGACAATAAAGTTGAAGGGAAAAGTAACTAATGTCCTGTATGTTTGATAAGTAATTTGAACAAACTAAATCCTCAAAAGAGAGAATTGTTTTGAAACCAAGATAAGCATAATTTGGATTGATGTTAATCATTCATCTGCATATAGATTCTAAATTTGACTAAGATTTTTCAAATCTAATTTTTTGGTAAATTGCTGCAGCAATGGATTGACCTCGCACGCTCTACTGGACTGCAAGTTAGAAAGACCGAGTCACCTGAGCCACCTACATCAGATTCTCCAAATCAAGCTGCTATCTTATGCAACTCTACCGGACTGCAAGTTACAAAGACCGAGTCACCTGAGCCACCTTCATCAGATTCTCCAAATCAAGCTGCAATCTTATGCAACGAAGCAGAAGAAGCCAGCATCGATGAGATTAAAAGTGAATGA
Protein sequence

>MS.gene039996.t1

MKPNAQASFATGPPHVTYFHRVTVSRAVPSQTHLPPPNQKLRQFRTAKRRRVNLSITAANNTEHHDGNNGVERIECSPVRSNRRGVLMAPFLAAGASFLLSAATTRAAEEEKIKENTVSVEATVVKPEEVKKIEEEVITSRIYDATAIGEPLAIGKERGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVDVDKRLSLAIEAFPADLQEPLNQYMDKKMDGETLKSYTMHWPPERWQEYEPILSYCRENGIRLVACGTPLKILRTVQAEGISGLTKAERKLYAPPAGSGFISGFSSMSRRYSADSTPNLSFPFGPSSYLSAQARVVDEYTMSQTILQNMLDGGATGMLIVVTGASHVTYGARGTGVPARISRKLQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLQRLAIEEGISVTTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADESIAPDNISSLIGLLGSIPDNAFQKNPVGTNWNLNHRIASVVFGGLKLAGVGFISSIGAVASSNSLFAVRKFLNPAIITNKQIARSPILKTAVVYALFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQQWIDLARSTGLQVRKTESPEPPTSDSPNQAAILCNSTGLQVTKTESPEPPSSDSPNQAAILCNEAEEASIDEIKSE