Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039995.t1 | XP_003601002.1 | 96.4 | 780 | 28 | 0 | 1 | 780 | 1 | 780 | 0.00E+00 | 1392.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039995.t1 | Q8RWG3 | 76.2 | 584 | 138 | 1 | 138 | 720 | 129 | 712 | 7.0e-264 | 911.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039995.t1 | G7J2E8 | 96.4 | 780 | 28 | 0 | 1 | 780 | 1 | 780 | 0.0e+00 | 1392.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87666 | MS.gene039995 | PPI |
| MS.gene007994 | MS.gene039995 | PPI |
| MS.gene039995 | MS.gene031914 | PPI |
| MS.gene039996 | MS.gene039995 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039995.t1 | MTR_3g071970 | 97.179 | 780 | 22 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1572 |
| MS.gene039995.t1 | MTR_0013s0150 | 37.288 | 295 | 168 | 6 | 427 | 716 | 95 | 377 | 2.11e-55 | 195 |
| MS.gene039995.t1 | MTR_3g033620 | 35.315 | 286 | 170 | 5 | 434 | 716 | 114 | 387 | 7.74e-49 | 177 |
| MS.gene039995.t1 | MTR_4g077000 | 34.828 | 290 | 176 | 5 | 430 | 716 | 109 | 388 | 2.22e-48 | 176 |
| MS.gene039995.t1 | MTR_7g064130 | 27.897 | 233 | 161 | 3 | 485 | 716 | 222 | 448 | 4.94e-24 | 106 |
| MS.gene039995.t1 | MTR_2g084605 | 29.010 | 293 | 184 | 8 | 434 | 716 | 114 | 392 | 1.25e-21 | 98.2 |
| MS.gene039995.t1 | MTR_7g074070 | 29.461 | 241 | 139 | 7 | 482 | 716 | 103 | 318 | 1.38e-17 | 85.5 |
| MS.gene039995.t1 | MTR_2g081000 | 27.092 | 251 | 162 | 5 | 426 | 670 | 173 | 408 | 1.20e-16 | 84.3 |
| MS.gene039995.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 93 | 315 | 2.77e-16 | 81.3 |
| MS.gene039995.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 93 | 315 | 1.49e-15 | 79.7 |
| MS.gene039995.t1 | MTR_7g074090 | 26.939 | 245 | 154 | 6 | 483 | 724 | 111 | 333 | 2.09e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039995.t1 | AT2G40400 | 68.981 | 648 | 172 | 3 | 134 | 780 | 116 | 735 | 0.0 | 951 |
| MS.gene039995.t1 | AT2G40400 | 68.981 | 648 | 172 | 3 | 134 | 780 | 116 | 735 | 0.0 | 951 |
| MS.gene039995.t1 | AT3G56140 | 73.892 | 609 | 158 | 1 | 134 | 741 | 125 | 733 | 0.0 | 946 |
| MS.gene039995.t1 | AT3G56140 | 73.892 | 609 | 158 | 1 | 134 | 741 | 125 | 733 | 0.0 | 946 |
| MS.gene039995.t1 | AT2G40400 | 74.206 | 535 | 137 | 1 | 134 | 667 | 116 | 650 | 0.0 | 864 |
| MS.gene039995.t1 | AT3G56140 | 73.735 | 514 | 134 | 1 | 229 | 741 | 1 | 514 | 0.0 | 788 |
| MS.gene039995.t1 | AT5G12470 | 35.739 | 291 | 178 | 5 | 427 | 716 | 101 | 383 | 1.17e-51 | 185 |
| MS.gene039995.t1 | AT2G37860 | 26.441 | 295 | 199 | 7 | 429 | 716 | 149 | 432 | 3.00e-25 | 110 |
| MS.gene039995.t1 | AT2G37860 | 26.441 | 295 | 199 | 7 | 429 | 716 | 149 | 432 | 3.00e-25 | 110 |
| MS.gene039995.t1 | AT5G22790 | 27.778 | 288 | 195 | 7 | 434 | 716 | 154 | 433 | 6.10e-25 | 108 |
| MS.gene039995.t1 | AT3G08630 | 29.237 | 236 | 146 | 8 | 483 | 716 | 103 | 319 | 3.10e-21 | 96.3 |
| MS.gene039995.t1 | AT3G08640 | 28.287 | 251 | 157 | 8 | 483 | 729 | 106 | 337 | 1.36e-20 | 94.4 |
| MS.gene039995.t1 | AT5G24690 | 27.203 | 261 | 168 | 6 | 426 | 680 | 172 | 416 | 1.09e-17 | 87.4 |
| MS.gene039995.t1 | AT2G37860 | 23.858 | 197 | 146 | 2 | 434 | 629 | 154 | 347 | 6.07e-13 | 71.6 |
| MS.gene039995.t1 | AT2G37860 | 23.858 | 197 | 146 | 2 | 434 | 629 | 154 | 347 | 6.07e-13 | 71.6 |
Find 204 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGCGAATGAACTGTCTTTC+TGG | 0.090777 | 3.1:-58775007 | None:intergenic |
| TCTTCTTGATACAGGGTTTC+AGG | 0.152745 | 3.1:+58776057 | MS.gene039995:intron |
| CGAATTGCATCAGTTGTATT+TGG | 0.192343 | 3.1:+58776404 | MS.gene039995:CDS |
| CTTAGTTACTGTCGTGAAAA+TGG | 0.222076 | 3.1:+58773990 | MS.gene039995:CDS |
| GAATGCTAGAGTTGTGTATT+TGG | 0.273191 | 3.1:+58773227 | MS.gene039995:CDS |
| CATAAGATTGCAGCTTGATT+TGG | 0.278656 | 3.1:-58778718 | None:intergenic |
| AATGCTAGAGTTGTGTATTT+GGG | 0.288954 | 3.1:+58773228 | MS.gene039995:CDS |
| TGTTGATAAGCGATTATCTT+TGG | 0.300117 | 3.1:+58773332 | MS.gene039995:CDS |
| CCAAATCTGTCGTTTCCTTT+TGG | 0.305738 | 3.1:+58774770 | MS.gene039995:CDS |
| GCCGGTTCAGGCTTCATATC+AGG | 0.318344 | 3.1:+58774707 | MS.gene039995:CDS |
| CATAAGATAGCAGCTTGATT+TGG | 0.319979 | 3.1:-58778634 | None:intergenic |
| CTTCAAAAGGGAATTGATCT+TGG | 0.320765 | 3.1:+58775879 | MS.gene039995:CDS |
| CACGGACAATCAATTCTTAC+TGG | 0.323981 | 3.1:+58777450 | MS.gene039995:CDS |
| TTTCTCATCAACAGATCTTA+AGG | 0.326958 | 3.1:+58774621 | MS.gene039995:intron |
| GCATATTTACAAGAAATGTT+TGG | 0.329508 | 3.1:-58777415 | None:intergenic |
| AGAACCCAGTGGGGACAAAT+TGG | 0.330231 | 3.1:+58776369 | MS.gene039995:CDS |
| ATCTGCAAATCTCCGTTATC+AGG | 0.331816 | 3.1:+58776598 | MS.gene039995:CDS |
| AGTTCTCTAATAGGACTTCT+TGG | 0.338841 | 3.1:+58776320 | MS.gene039995:CDS |
| TGCTAGTCTTTGCAAGAACT+TGG | 0.340316 | 3.1:-58776099 | None:intergenic |
| AGAACTCACTCACCGTTTCC+AGG | 0.340540 | 3.1:+58775962 | MS.gene039995:CDS |
| GACGACAAGGGCGGCGGAGG+AGG | 0.358045 | 3.1:+58773038 | MS.gene039995:CDS |
| CATATTTACAAGAAATGTTT+GGG | 0.367643 | 3.1:-58777414 | None:intergenic |
| ATTAGAGAACTAATGTTATC+AGG | 0.372366 | 3.1:-58776308 | None:intergenic |
| TGAAGCAACGGTTGTTAAAC+CGG | 0.377949 | 3.1:+58773089 | MS.gene039995:CDS |
| ACATATGGAGCTAGAGGAAC+TGG | 0.381829 | 3.1:+58774923 | MS.gene039995:CDS |
| CCAAAAGGAAACGACAGATT+TGG | 0.382199 | 3.1:-58774770 | None:intergenic |
| TATGCACCTCCAGCCGGTTC+AGG | 0.382397 | 3.1:+58774695 | MS.gene039995:CDS |
| GGAGCCACTTAATCAGTATA+TGG | 0.382755 | 3.1:+58773383 | MS.gene039995:CDS |
| TTTGATATGCAGATAATTGC+TGG | 0.385689 | 3.1:+58777356 | MS.gene039995:intron |
| GCGAAAGAAGCCTGGGCATT+GGG | 0.389102 | 3.1:-58772736 | None:intergenic |
| ATGCATTGTATAAGACTTCA+AGG | 0.390763 | 3.1:-58773931 | None:intergenic |
| GATAACATTAGTTCTCTAAT+AGG | 0.396181 | 3.1:+58776311 | MS.gene039995:CDS |
| ATCTTACAAAATATGCTTGA+TGG | 0.396790 | 3.1:+58774854 | MS.gene039995:CDS |
| GGCCTGTGGCGAAAGAAGCC+TGG | 0.397330 | 3.1:-58772744 | None:intergenic |
| AGAGCTTGACTATGTTATTA+CGG | 0.398518 | 3.1:+58776193 | MS.gene039995:CDS |
| GCTCGGGTTATGAATGCTGC+TGG | 0.402906 | 3.1:+58775115 | MS.gene039995:CDS |
| GTCAAAGCAATTTCTGCTAC+AGG | 0.405412 | 3.1:-58775080 | None:intergenic |
| TTCTTTCTGCGGCGACGACA+AGG | 0.406359 | 3.1:+58773025 | MS.gene039995:CDS |
| GCAATTTCTGCTACAGGGTC+TGG | 0.409182 | 3.1:-58775074 | None:intergenic |
| GGTTCGAGATGATAAGGAAT+TGG | 0.416736 | 3.1:+58773269 | MS.gene039995:CDS |
| CAACCGGCGAGGAGTGTTGA+TGG | 0.420911 | 3.1:+58772972 | MS.gene039995:CDS |
| TCGGAGGTGGAAGATGAGTC+TGG | 0.423468 | 3.1:-58772819 | None:intergenic |
| TTGGCTTCAGGATCTTCAAA+AGG | 0.426441 | 3.1:+58775866 | MS.gene039995:intron |
| ATTGACCTCGCACGCTCTAC+TGG | 0.429541 | 3.1:+58778562 | MS.gene039995:CDS |
| GTTGGATTTATTTCAAGTAT+TGG | 0.430933 | 3.1:+58776446 | MS.gene039995:CDS |
| AGATATGAGCTTGGACCAAA+AGG | 0.431226 | 3.1:-58774785 | None:intergenic |
| AGATTCCAATTTGTCCCCAC+TGG | 0.431706 | 3.1:-58776374 | None:intergenic |
| GGAGAAGATAAAGGAGAATA+CGG | 0.432178 | 3.1:+58773059 | MS.gene039995:CDS |
| GGAAAGAGAGAGGGAAAGTG+TGG | 0.432186 | 3.1:+58773193 | MS.gene039995:CDS |
| TTATCCATATACTGATTAAG+TGG | 0.432289 | 3.1:-58773387 | None:intergenic |
| TCATACTCCTGCCATCGTTC+AGG | 0.432726 | 3.1:-58773960 | None:intergenic |
| TCACGACAGTAACTAAGAAT+AGG | 0.433080 | 3.1:-58773984 | None:intergenic |
| TGTTTGTTAGTGATAATTGC+TGG | 0.433263 | 3.1:-58776518 | None:intergenic |
| GGCGACGACAAGGGCGGCGG+AGG | 0.433973 | 3.1:+58773035 | MS.gene039995:CDS |
| GGCGAATGAACTGTCTTTCT+GGG | 0.434604 | 3.1:-58775006 | None:intergenic |
| TAGGTGAACCGTTGGCGATA+GGG | 0.435940 | 3.1:+58773172 | MS.gene039995:CDS |
| TTGACCGGGTTGAGATTGCT+CGG | 0.437015 | 3.1:+58775098 | MS.gene039995:CDS |
| GCCCAGGCTTCTTTCGCCAC+AGG | 0.438210 | 3.1:+58772742 | MS.gene039995:CDS |
| CCTCGCCGGTTGCTTCGTAC+TGG | 0.441228 | 3.1:-58772961 | None:intergenic |
| GGCGGAGGAGGAGAAGATAA+AGG | 0.443539 | 3.1:+58773050 | MS.gene039995:CDS |
| TCTATCTTCTTCACCTCCTC+CGG | 0.445871 | 3.1:-58773108 | None:intergenic |
| GTTGTTTCCGTCGTGGTGTT+CGG | 0.446693 | 3.1:-58772914 | None:intergenic |
| GGTCTAAAACTCGCTGGCGT+TGG | 0.455815 | 3.1:+58776428 | MS.gene039995:CDS |
| GCCTGATATGAAGCCTGAAC+CGG | 0.457500 | 3.1:-58774708 | None:intergenic |
| CTCTCTTTCCCTATCGCCAA+CGG | 0.462103 | 3.1:-58773180 | None:intergenic |
| CTTCTTGATACAGGGTTTCA+GGG | 0.463114 | 3.1:+58776058 | MS.gene039995:intron |
| GGCGAAAGAAGCCTGGGCAT+TGG | 0.464505 | 3.1:-58772737 | None:intergenic |
| GTAGCAGAAATTGCTTTGAC+CGG | 0.474834 | 3.1:+58775083 | MS.gene039995:CDS |
| GGTGCAAGCCATGTCACATA+TGG | 0.477383 | 3.1:+58774908 | MS.gene039995:CDS |
| TACGGTGTCGGTTGAAGCAA+CGG | 0.484374 | 3.1:+58773077 | MS.gene039995:CDS |
| GCCTGTGGCGAAAGAAGCCT+GGG | 0.486642 | 3.1:-58772743 | None:intergenic |
| GGTATTGTTAGCTGCGGTGA+TGG | 0.488263 | 3.1:-58772893 | None:intergenic |
| GCAGATAATTGCTGGGGTTG+TGG | 0.489520 | 3.1:+58777364 | MS.gene039995:intron |
| ATTGCATCAGTTGTATTTGG+TGG | 0.489742 | 3.1:+58776407 | MS.gene039995:CDS |
| GCCCACTAATCCCTTCTGCT+TGG | 0.490070 | 3.1:-58774649 | None:intergenic |
| TGGCTTCAGGATCTTCAAAA+GGG | 0.490844 | 3.1:+58775867 | MS.gene039995:intron |
| TGCGGCGACGACAAGGGCGG+CGG | 0.493291 | 3.1:+58773032 | MS.gene039995:CDS |
| GATTCCAATTTGTCCCCACT+GGG | 0.496606 | 3.1:-58776373 | None:intergenic |
| TGATCTTGGTTTAGTATCAC+CGG | 0.498342 | 3.1:+58775893 | MS.gene039995:CDS |
| GGGTTTCAGGGAAAGATTGT+TGG | 0.502306 | 3.1:+58776070 | MS.gene039995:intron |
| TCTTTCTGCGGCGACGACAA+GGG | 0.503242 | 3.1:+58773026 | MS.gene039995:CDS |
| AGTTCCGGTTCGAGATGATA+AGG | 0.504021 | 3.1:+58773263 | MS.gene039995:CDS |
| AATACAAATTTACCTGGAAA+CGG | 0.504032 | 3.1:-58775974 | None:intergenic |
| GTCCAAGCAGAAGGGATTAG+TGG | 0.505797 | 3.1:+58774647 | MS.gene039995:CDS |
| TTGATATGCAGATAATTGCT+GGG | 0.507089 | 3.1:+58777357 | MS.gene039995:intron |
| ATGCTTGATGGAGGGGCCAC+CGG | 0.507280 | 3.1:+58774866 | MS.gene039995:CDS |
| CTCTAGCTCCATATGTGACA+TGG | 0.508607 | 3.1:-58774916 | None:intergenic |
| ACAAAATATGCTTGATGGAG+GGG | 0.508686 | 3.1:+58774859 | MS.gene039995:CDS |
| TTGAAATGCATTGTCAGGGA+TGG | 0.509174 | 3.1:-58776345 | None:intergenic |
| GTTCTCCAGTACGAAGCAAC+CGG | 0.512381 | 3.1:+58772956 | MS.gene039995:CDS |
| GAAAGTAAGTCACGTGCGGC+GGG | 0.513194 | 3.1:-58772765 | None:intergenic |
| GTTCTCTAAATACCTGATAA+CGG | 0.515162 | 3.1:-58776610 | None:intergenic |
| ATAGGTGAACCGTTGGCGAT+AGG | 0.517601 | 3.1:+58773171 | MS.gene039995:CDS |
| ACGGACAATCAATTCTTACT+GGG | 0.519712 | 3.1:+58777451 | MS.gene039995:CDS |
| AGGAATGATAAAGTTGGTGC+AGG | 0.519719 | 3.1:-58776260 | None:intergenic |
| TTAAGGACTGTCCAAGCAGA+AGG | 0.520748 | 3.1:+58774638 | MS.gene039995:CDS |
| GAATCTGATGTAGGTGGCTC+AGG | 0.521983 | 3.1:-58778610 | None:intergenic |
| TTGGCCGCCTGAACGATGGC+AGG | 0.528649 | 3.1:+58773953 | MS.gene039995:CDS |
| AGTGGCTCCTGAAGATCAGC+AGG | 0.528866 | 3.1:-58773369 | None:intergenic |
| GCTAGTCTTTGCAAGAACTT+GGG | 0.533750 | 3.1:-58776098 | None:intergenic |
| GAATCTGATGAAGGTGGCTC+AGG | 0.534682 | 3.1:-58778694 | None:intergenic |
| ATATATGATGCAACGGCGAT+AGG | 0.534917 | 3.1:+58773153 | MS.gene039995:CDS |
| TGAAGTCTTATACAATGCAT+TGG | 0.535749 | 3.1:+58773934 | MS.gene039995:CDS |
| TAGGAAAGGAATGATAAAGT+TGG | 0.537940 | 3.1:-58776266 | None:intergenic |
| CAAAGACTAGCAATAGAAGA+AGG | 0.538188 | 3.1:+58776110 | MS.gene039995:CDS |
| AATTCCTTATCATCTCGAAC+CGG | 0.538956 | 3.1:-58773267 | None:intergenic |
| GACTGTCATGGCAGGATGGA+TGG | 0.539731 | 3.1:+58773903 | MS.gene039995:intron |
| AGCTTCCTTTCTTCTTTCTG+CGG | 0.540180 | 3.1:+58773014 | MS.gene039995:CDS |
| TTGCTGGGGTTGTGGAGCAT+CGG | 0.546344 | 3.1:+58777372 | MS.gene039995:CDS |
| TGAAGGTGGCTCAGGTGACT+CGG | 0.549801 | 3.1:-58778686 | None:intergenic |
| TGAATGCTGCTGGGCAGAGA+CGG | 0.550691 | 3.1:+58775125 | MS.gene039995:CDS |
| AGTCACGTGCGGCGGGCCTG+TGG | 0.551744 | 3.1:-58772758 | None:intergenic |
| GAAAGAGAGAGGGAAAGTGT+GGG | 0.552614 | 3.1:+58773194 | MS.gene039995:CDS |
| GAATGCTGCTGGGCAGAGAC+GGG | 0.554415 | 3.1:+58775126 | MS.gene039995:CDS |
| GAGACGGGATGCCCTCCCAC+AGG | 0.554747 | 3.1:+58775141 | MS.gene039995:CDS |
| TGTAGGTGGCTCAGGTGACT+CGG | 0.556660 | 3.1:-58778602 | None:intergenic |
| AAATTATATGCACCTCCAGC+CGG | 0.558669 | 3.1:+58774689 | MS.gene039995:CDS |
| TTGTAAAGAATTTGCATAAG+CGG | 0.562562 | 3.1:+58773301 | MS.gene039995:CDS |
| TGACCGGGTTGAGATTGCTC+GGG | 0.562769 | 3.1:+58775099 | MS.gene039995:CDS |
| TACAAAATATGCTTGATGGA+GGG | 0.564237 | 3.1:+58774858 | MS.gene039995:CDS |
| TGCATTGGCCGCCTGAACGA+TGG | 0.564565 | 3.1:+58773949 | MS.gene039995:CDS |
| CATATGGAGCTAGAGGAACT+GGG | 0.567576 | 3.1:+58774924 | MS.gene039995:CDS |
| GGAGGAGGTGAAGAAGATAG+AGG | 0.570113 | 3.1:+58773110 | MS.gene039995:CDS |
| AACGGTTGTTAAACCGGAGG+AGG | 0.570414 | 3.1:+58773095 | MS.gene039995:CDS |
| AAGAAGTTCTGCAATACCTC+CGG | 0.571472 | 3.1:-58775912 | None:intergenic |
| CTCGGGTTATGAATGCTGCT+GGG | 0.571983 | 3.1:+58775116 | MS.gene039995:CDS |
| TTACAAAATATGCTTGATGG+AGG | 0.573219 | 3.1:+58774857 | MS.gene039995:CDS |
| TACTCCTGCCATCGTTCAGG+CGG | 0.574643 | 3.1:-58773957 | None:intergenic |
| TAGCAGAAATTGCTTTGACC+GGG | 0.576460 | 3.1:+58775084 | MS.gene039995:CDS |
| AAGCTCATATCTATCTGCAC+AGG | 0.578491 | 3.1:+58774796 | MS.gene039995:CDS |
| TGCTTGTGGTACTCCACTGA+AGG | 0.579264 | 3.1:+58774025 | MS.gene039995:CDS |
| CGGAGGTGGAAGATGAGTCT+GGG | 0.579331 | 3.1:-58772818 | None:intergenic |
| GGTCTTTGTAACTTGCAGTC+CGG | 0.579868 | 3.1:-58778665 | None:intergenic |
| AAATTTGAACATACCTTCAG+TGG | 0.581152 | 3.1:-58774038 | None:intergenic |
| AGACAGTTCATTCGCCGTGA+GGG | 0.581170 | 3.1:+58775013 | MS.gene039995:CDS |
| TGATTTGGAGAATCTGATGT+AGG | 0.581495 | 3.1:-58778619 | None:intergenic |
| TTTGGTGGTCTAAAACTCGC+TGG | 0.583586 | 3.1:+58776422 | MS.gene039995:CDS |
| TGAAAGTAAGTCACGTGCGG+CGG | 0.586751 | 3.1:-58772766 | None:intergenic |
| TGATTTGGAGAATCTGATGA+AGG | 0.587198 | 3.1:-58778703 | None:intergenic |
| TCCAAGCAGAAGGGATTAGT+GGG | 0.588891 | 3.1:+58774648 | MS.gene039995:CDS |
| GCTATCTTATGCAACTCTAC+CGG | 0.590768 | 3.1:+58778646 | MS.gene039995:CDS |
| TCTATCTGCACAGGCTAGAG+TGG | 0.591577 | 3.1:+58774805 | MS.gene039995:CDS |
| GATATGAAGCCTGAACCGGC+TGG | 0.591682 | 3.1:-58774704 | None:intergenic |
| CGTCGCCGCAGAAAGAAGAA+AGG | 0.594142 | 3.1:-58773019 | None:intergenic |
| GGAATCCGTCTTGTTGCTTG+TGG | 0.594184 | 3.1:+58774011 | MS.gene039995:CDS |
| AACGGCGATAGGTGAACCGT+TGG | 0.596522 | 3.1:+58773164 | MS.gene039995:CDS |
| TGTGCAGATAGATATGAGCT+TGG | 0.597352 | 3.1:-58774794 | None:intergenic |
| CGCAATTGACTCATCAGCAT+AGG | 0.597542 | 3.1:-58776285 | None:intergenic |
| AAGATGAGTCTGGGAAGGTA+CGG | 0.598763 | 3.1:-58772809 | None:intergenic |
| GCATTTCAAAAGAACCCAGT+GGG | 0.600369 | 3.1:+58776359 | MS.gene039995:CDS |
| TTGACTCATCAGCATAGGAA+AGG | 0.600777 | 3.1:-58776280 | None:intergenic |
| TCACTAACAAACAGATTGCA+AGG | 0.600933 | 3.1:+58776528 | MS.gene039995:CDS |
| CATGTCACATATGGAGCTAG+AGG | 0.602908 | 3.1:+58774917 | MS.gene039995:CDS |
| TTCTGCGGCGACGACAAGGG+CGG | 0.603218 | 3.1:+58773029 | MS.gene039995:CDS |
| GGAGGTGAAGAAGATAGAGG+AGG | 0.603634 | 3.1:+58773113 | MS.gene039995:CDS |
| CAATTCTTACTGGGGAACGC+AGG | 0.606143 | 3.1:+58777460 | MS.gene039995:CDS |
| TCAAAGCAATTTCTGCTACA+GGG | 0.606508 | 3.1:-58775079 | None:intergenic |
| TTGGCGATAGGGAAAGAGAG+AGG | 0.610708 | 3.1:+58773183 | MS.gene039995:CDS |
| TTGTTGATTTCTTCACAGTG+TGG | 0.614872 | 3.1:+58776234 | MS.gene039995:CDS |
| GTCGAGGATATATGATGCAA+CGG | 0.620249 | 3.1:+58773146 | MS.gene039995:CDS |
| TGTTAGCTGCGGTGATGGAG+AGG | 0.620468 | 3.1:-58772888 | None:intergenic |
| CGACGCCGTTGTTTCCGTCG+TGG | 0.620705 | 3.1:-58772921 | None:intergenic |
| TGGCGATAGGGAAAGAGAGA+GGG | 0.621244 | 3.1:+58773184 | MS.gene039995:CDS |
| AAGAAGAAAGGAAGCTCCAG+CGG | 0.626670 | 3.1:-58773007 | None:intergenic |
| GATAAAGGAGAATACGGTGT+CGG | 0.626733 | 3.1:+58773065 | MS.gene039995:CDS |
| GCAGTCCAGTAGAGCGTGCG+AGG | 0.627373 | 3.1:-58778567 | None:intergenic |
| GCGCCATCAACACTCCTCGC+CGG | 0.627563 | 3.1:-58772975 | None:intergenic |
| AACAATACCGAACACCACGA+CGG | 0.629518 | 3.1:+58772907 | MS.gene039995:CDS |
| AGTCACAACTATCAACATAC+CGG | 0.634556 | 3.1:-58774885 | None:intergenic |
| TAAGGACTGTCCAAGCAGAA+GGG | 0.637036 | 3.1:+58774639 | MS.gene039995:CDS |
| GAACACCACGACGGAAACAA+CGG | 0.638488 | 3.1:+58772916 | MS.gene039995:CDS |
| AGGGATTAGTGGGCTAACAA+AGG | 0.639086 | 3.1:+58774658 | MS.gene039995:CDS |
| TATTAGCACAGTATCAGAAG+CGG | 0.643218 | 3.1:+58776153 | MS.gene039995:CDS |
| GGTGGAAGATGAGTCTGGGA+AGG | 0.644361 | 3.1:-58772814 | None:intergenic |
| TGGCCAACTAACCTGTGGGA+GGG | 0.648648 | 3.1:-58775152 | None:intergenic |
| TAACCCGAGCAATCTCAACC+CGG | 0.649576 | 3.1:-58775102 | None:intergenic |
| ATGGCCAACTAACCTGTGGG+AGG | 0.651841 | 3.1:-58775153 | None:intergenic |
| ATGCTAGAGTTGTGTATTTG+GGG | 0.654997 | 3.1:+58773229 | MS.gene039995:CDS |
| CGGTGATGGAGAGGTTGACA+CGG | 0.659005 | 3.1:-58772879 | None:intergenic |
| GTTATTACGGACACTGTCAG+AGG | 0.660546 | 3.1:+58776206 | MS.gene039995:CDS |
| GGTATGTTGATAGTTGTGAC+TGG | 0.667974 | 3.1:+58774887 | MS.gene039995:CDS |
| GAGTACCACAAGCAACAAGA+CGG | 0.670544 | 3.1:-58774016 | None:intergenic |
| AAGACAGTTCATTCGCCGTG+AGG | 0.674905 | 3.1:+58775012 | MS.gene039995:CDS |
| AGCAACGGTTGTTAAACCGG+AGG | 0.682945 | 3.1:+58773092 | MS.gene039995:CDS |
| TTTGGAGAATCTGATGTAGG+TGG | 0.683114 | 3.1:-58778616 | None:intergenic |
| TGATATGCAGATAATTGCTG+GGG | 0.689345 | 3.1:+58777358 | MS.gene039995:intron |
| GTGTTCGGTATTGTTAGCTG+CGG | 0.690961 | 3.1:-58772899 | None:intergenic |
| CGGACAATCAATTCTTACTG+GGG | 0.691240 | 3.1:+58777452 | MS.gene039995:CDS |
| CACAACTATCAACATACCGG+TGG | 0.692061 | 3.1:-58774882 | None:intergenic |
| CAACAGGAACTTCTCCCTCA+CGG | 0.692731 | 3.1:-58775027 | None:intergenic |
| CGGTGAAAGTAAGTCACGTG+CGG | 0.694390 | 3.1:-58772769 | None:intergenic |
| ATATGGAGCTAGAGGAACTG+GGG | 0.700000 | 3.1:+58774925 | MS.gene039995:CDS |
| TCTTGGTTTAGTATCACCGG+AGG | 0.703286 | 3.1:+58775896 | MS.gene039995:CDS |
| CCAGTACGAAGCAACCGGCG+AGG | 0.704719 | 3.1:+58772961 | MS.gene039995:CDS |
| ATGAAGCCTGAACCGGCTGG+AGG | 0.705896 | 3.1:-58774701 | None:intergenic |
| TTTGGAGAATCTGATGAAGG+TGG | 0.706792 | 3.1:-58778700 | None:intergenic |
| TGCATTTCAAAAGAACCCAG+TGG | 0.707372 | 3.1:+58776358 | MS.gene039995:CDS |
| AGGAGGAAGTGATAACGTCG+AGG | 0.707415 | 3.1:+58773130 | MS.gene039995:CDS |
| TGCTAGAGTTGTGTATTTGG+GGG | 0.710856 | 3.1:+58773230 | MS.gene039995:CDS |
| ATTTCTGCTACAGGGTCTGG+CGG | 0.715985 | 3.1:-58775071 | None:intergenic |
| TGATGGAGAGGTTGACACGG+CGG | 0.731595 | 3.1:-58772876 | None:intergenic |
| TGAGTGAGTTCTGAAAGCAG+AGG | 0.753513 | 3.1:-58775951 | None:intergenic |
| CATTTCAAAAGAACCCAGTG+GGG | 0.761830 | 3.1:+58776360 | MS.gene039995:CDS |
| CGGCACGTGAGACAGTTACG+CGG | 0.785215 | 3.1:-58772789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCAAATCTAATTTTT+TGG | + | chr3.1:58778520-58778539 | MS.gene039995:intron | 10.0% |
| !! | AATTTAATTATCATGATAAG+CGG | + | chr3.1:58773476-58773495 | MS.gene039995:intron | 15.0% |
| !! | ATATACAAATTTCTCATTAA+AGG | + | chr3.1:58778253-58778272 | MS.gene039995:intron | 15.0% |
| !! | CAGAAAAAATAATTCATAAA+AGG | - | chr3.1:58775324-58775343 | None:intergenic | 15.0% |
| !! | GGTTATTTAAATTTAATACA+TGG | + | chr3.1:58777996-58778015 | MS.gene039995:intron | 15.0% |
| !!! | TCATGATAATTAAATTGTTT+TGG | - | chr3.1:58773472-58773491 | None:intergenic | 15.0% |
| !!! | TTAAAATTTTAAAATCCTTG+TGG | - | chr3.1:58774241-58774260 | None:intergenic | 15.0% |
| !!! | TTATGAATTATTTTTTCTGT+AGG | + | chr3.1:58775325-58775344 | MS.gene039995:intron | 15.0% |
| !!! | TTCAATGTTTTAAATTTGTT+GGG | + | chr3.1:58774468-58774487 | MS.gene039995:intron | 15.0% |
| !! | AAAAACCTAATCTATGAATT+AGG | + | chr3.1:58774282-58774301 | MS.gene039995:intron | 20.0% |
| !! | AAAAACCTAATTCATAGATT+AGG | - | chr3.1:58774290-58774309 | None:intergenic | 20.0% |
| !! | AAATTACTTATCAAACATAC+AGG | - | chr3.1:58778394-58778413 | None:intergenic | 20.0% |
| !! | AAGTACAACAAATTATACAT+TGG | + | chr3.1:58777873-58777892 | MS.gene039995:intron | 20.0% |
| !! | ACTTAATAAGCACTTAATTA+AGG | - | chr3.1:58773528-58773547 | None:intergenic | 20.0% |
| !! | AGTACAACAAATTATACATT+GGG | + | chr3.1:58777874-58777893 | MS.gene039995:intron | 20.0% |
| !! | ATGAGAAATTTGTATATGAA+AGG | - | chr3.1:58778250-58778269 | None:intergenic | 20.0% |
| !! | ATTATTGCTGAATTTAATGT+GGG | + | chr3.1:58776876-58776895 | MS.gene039995:intron | 20.0% |
| !! | CATATTTACAAGAAATGTTT+GGG | - | chr3.1:58777417-58777436 | None:intergenic | 20.0% |
| !! | CTCTAAGTTAAAATTTAACA+TGG | - | chr3.1:58778279-58778298 | None:intergenic | 20.0% |
| !! | GGTCTATTATTTAATCTTTA+TGG | - | chr3.1:58774220-58774239 | None:intergenic | 20.0% |
| !! | TAAAGGATGATTACATTAAA+GGG | - | chr3.1:58775796-58775815 | None:intergenic | 20.0% |
| !! | TATTATTGCTGAATTTAATG+TGG | + | chr3.1:58776875-58776894 | MS.gene039995:intron | 20.0% |
| !! | TCAAAAAATACAAATTTACC+TGG | - | chr3.1:58775983-58776002 | None:intergenic | 20.0% |
| !! | TTGTTCATGAAAAAAACTTA+TGG | - | chr3.1:58773569-58773588 | None:intergenic | 20.0% |
| !!! | AACATGATTATATTTCCTTT+TGG | + | chr3.1:58775847-58775866 | MS.gene039995:intron | 20.0% |
| !!! | AATAAGAGCATAACAAAAAT+CGG | - | chr3.1:58773722-58773741 | None:intergenic | 20.0% |
| !!! | AATTTATGTTTCTTTTACCT+TGG | + | chr3.1:58773798-58773817 | MS.gene039995:intron | 20.0% |
| !!! | ATTGACTTTCCTTTAATTTA+AGG | - | chr3.1:58778335-58778354 | None:intergenic | 20.0% |
| !!! | CTAAGACACTTTTTATTATT+GGG | - | chr3.1:58776978-58776997 | None:intergenic | 20.0% |
| !!! | GAATTTTGAAAATGATCAAA+AGG | - | chr3.1:58777518-58777537 | None:intergenic | 20.0% |
| !!! | GCATTTTTCCTTTAAATTAT+TGG | - | chr3.1:58776818-58776837 | None:intergenic | 20.0% |
| !!! | GTTCAATGTTTTAAATTTGT+TGG | + | chr3.1:58774467-58774486 | MS.gene039995:intron | 20.0% |
| !!! | TAATTTGTTGTACTTTACAT+TGG | - | chr3.1:58777868-58777887 | None:intergenic | 20.0% |
| !!! | TAGGTTTTTCATAATATTTG+AGG | + | chr3.1:58774301-58774320 | MS.gene039995:intron | 20.0% |
| !!! | TCTAAGACACTTTTTATTAT+TGG | - | chr3.1:58776979-58776998 | None:intergenic | 20.0% |
| !!! | TGCTTACTATTAATTTTTCA+AGG | + | chr3.1:58778138-58778157 | MS.gene039995:intron | 20.0% |
| !!! | TTGACTTTCCTTTAATTTAA+GGG | - | chr3.1:58778334-58778353 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTTCCTTAAATGT+TGG | + | chr3.1:58775488-58775507 | MS.gene039995:intron | 20.0% |
| ! | AAAAAGACGTAAAAGAAGAT+TGG | + | chr3.1:58776665-58776684 | MS.gene039995:intron | 25.0% |
| ! | AAACAGAAACATCAAGTAAA+AGG | - | chr3.1:58775383-58775402 | None:intergenic | 25.0% |
| ! | AAACCAAGATAAGCATAATT+TGG | + | chr3.1:58778450-58778469 | MS.gene039995:intron | 25.0% |
| ! | AACTTCAGTATTAATACAGA+AGG | - | chr3.1:58777328-58777347 | None:intergenic | 25.0% |
| ! | AATACAAATTTACCTGGAAA+CGG | - | chr3.1:58775977-58775996 | None:intergenic | 25.0% |
| ! | AATCCAAATTATGCTTATCT+TGG | - | chr3.1:58778456-58778475 | None:intergenic | 25.0% |
| ! | AATTACGACAATAAAGTTGA+AGG | + | chr3.1:58778352-58778371 | MS.gene039995:intron | 25.0% |
| ! | ACAAAAATCGGAAATTATCA+TGG | - | chr3.1:58773710-58773729 | None:intergenic | 25.0% |
| ! | ACTTGATATCCGAAAATTAT+AGG | - | chr3.1:58777586-58777605 | None:intergenic | 25.0% |
| ! | AGATCAGATAATATGTTGAA+AGG | + | chr3.1:58774401-58774420 | MS.gene039995:intron | 25.0% |
| ! | AGATTAAATAATAGACCACA+AGG | + | chr3.1:58774223-58774242 | MS.gene039995:intron | 25.0% |
| ! | ATCCTTAAAAAGTGATTTAG+AGG | + | chr3.1:58778081-58778100 | MS.gene039995:intron | 25.0% |
| ! | ATCTATTCCCCTTAAATTAA+AGG | + | chr3.1:58778323-58778342 | MS.gene039995:intron | 25.0% |
| ! | ATCTTACAAAATATGCTTGA+TGG | + | chr3.1:58774854-58774873 | MS.gene039995:CDS | 25.0% |
| ! | ATGACTCACCAATAATTTAA+AGG | + | chr3.1:58776807-58776826 | MS.gene039995:intron | 25.0% |
| ! | ATGTGAACTTAATATTGGAA+GGG | + | chr3.1:58777786-58777805 | MS.gene039995:intron | 25.0% |
| ! | ATTAAATATTCCCAACTTCA+GGG | + | chr3.1:58778184-58778203 | MS.gene039995:intron | 25.0% |
| ! | ATTAAGGCAATTGTTAAAGA+AGG | - | chr3.1:58777942-58777961 | None:intergenic | 25.0% |
| ! | ATTACGACAATAAAGTTGAA+GGG | + | chr3.1:58778353-58778372 | MS.gene039995:intron | 25.0% |
| ! | ATTAGAGAACTAATGTTATC+AGG | - | chr3.1:58776311-58776330 | None:intergenic | 25.0% |
| ! | CTAAAGGATGATTACATTAA+AGG | - | chr3.1:58775797-58775816 | None:intergenic | 25.0% |
| ! | CTTGATATCCGAAAATTATA+GGG | - | chr3.1:58777585-58777604 | None:intergenic | 25.0% |
| ! | GATCAGATAATATGTTGAAA+GGG | + | chr3.1:58774402-58774421 | MS.gene039995:intron | 25.0% |
| ! | GCATATTTACAAGAAATGTT+TGG | - | chr3.1:58777418-58777437 | None:intergenic | 25.0% |
| ! | GTACAACAAATTATACATTG+GGG | + | chr3.1:58777875-58777894 | MS.gene039995:intron | 25.0% |
| ! | GTAGTATGTGAACTTAATAT+TGG | + | chr3.1:58777781-58777800 | MS.gene039995:intron | 25.0% |
| ! | GTTAAAGAAGGATTCAAAAA+TGG | - | chr3.1:58777930-58777949 | None:intergenic | 25.0% |
| ! | TATGTGAACTTAATATTGGA+AGG | + | chr3.1:58777785-58777804 | MS.gene039995:intron | 25.0% |
| ! | TGTGTCAATAATCATATACT+GGG | - | chr3.1:58776692-58776711 | None:intergenic | 25.0% |
| ! | TTCTTTAACAATTGCCTTAA+TGG | + | chr3.1:58777941-58777960 | MS.gene039995:intron | 25.0% |
| ! | TTGTAAAGAATTTGCATAAG+CGG | + | chr3.1:58773301-58773320 | MS.gene039995:CDS | 25.0% |
| !! | AATAGATGCTCTAAGTTAAA+AGG | - | chr3.1:58778287-58778306 | None:intergenic | 25.0% |
| !! | AATTTAAAACATTGAACGCA+AGG | - | chr3.1:58774464-58774483 | None:intergenic | 25.0% |
| !! | AATTTTCTTGATATTCTTGC+AGG | - | chr3.1:58774953-58774972 | None:intergenic | 25.0% |
| !! | ATATGCTATCTTTTGTATCA+CGG | + | chr3.1:58777432-58777451 | MS.gene039995:CDS | 25.0% |
| !! | ATCAAGCATATTTTGTAAGA+TGG | - | chr3.1:58774855-58774874 | None:intergenic | 25.0% |
| !! | ATTTGAGGATATTTTCTTTC+TGG | + | chr3.1:58777208-58777227 | MS.gene039995:intron | 25.0% |
| !! | CAATTTTGTATCACCAAAAT+GGG | - | chr3.1:58775264-58775283 | None:intergenic | 25.0% |
| !! | GATAACATTAGTTCTCTAAT+AGG | + | chr3.1:58776311-58776330 | MS.gene039995:CDS | 25.0% |
| !! | GTATCTTTAAAAACTAGTTG+TGG | + | chr3.1:58776775-58776794 | MS.gene039995:intron | 25.0% |
| !! | GTTGGATTTATTTCAAGTAT+TGG | + | chr3.1:58776446-58776465 | MS.gene039995:CDS | 25.0% |
| !! | TCAATTTTGTATCACCAAAA+TGG | - | chr3.1:58775265-58775284 | None:intergenic | 25.0% |
| !! | TGACTTTCCTTTAATTTAAG+GGG | - | chr3.1:58778333-58778352 | None:intergenic | 25.0% |
| !! | TGTTTGAACCCTATAATTTT+CGG | + | chr3.1:58777574-58777593 | MS.gene039995:intron | 25.0% |
| !! | TTATCCATATACTGATTAAG+TGG | - | chr3.1:58773390-58773409 | None:intergenic | 25.0% |
| !!! | ACATTGATTCCAAGTATTTA+GGG | + | chr3.1:58775655-58775674 | MS.gene039995:intron | 25.0% |
| !!! | CAACTAGTTTTTAAAGATAC+AGG | - | chr3.1:58776775-58776794 | None:intergenic | 25.0% |
| !!! | CATTATCTTCTGAAATTTTC+TGG | + | chr3.1:58774093-58774112 | MS.gene039995:intron | 25.0% |
| !!! | GTGAAGATTATTTTTTCACT+TGG | + | chr3.1:58777899-58777918 | MS.gene039995:intron | 25.0% |
| !!! | TACATTGATTCCAAGTATTT+AGG | + | chr3.1:58775654-58775673 | MS.gene039995:intron | 25.0% |
| !!! | TACCTCTAAATCACTTTTTA+AGG | - | chr3.1:58778086-58778105 | None:intergenic | 25.0% |
| !!! | TTAGTTTTGTGATAGAAAGA+GGG | + | chr3.1:58777736-58777755 | MS.gene039995:intron | 25.0% |
| !!! | TTTAGTTTTGTGATAGAAAG+AGG | + | chr3.1:58777735-58777754 | MS.gene039995:intron | 25.0% |
| !!! | TTTTACTTGATGTTTCTGTT+TGG | + | chr3.1:58775382-58775401 | MS.gene039995:intron | 25.0% |
| AAATCTGATGATTAGGTAGT+TGG | + | chr3.1:58775725-58775744 | MS.gene039995:intron | 30.0% | |
| AAATTTGAACATACCTTCAG+TGG | - | chr3.1:58774041-58774060 | None:intergenic | 30.0% | |
| AAGAGCTTATTGAAATACAC+TGG | + | chr3.1:58773594-58773613 | MS.gene039995:intron | 30.0% | |
| AAGCTAATAAGTGAACGAAA+TGG | - | chr3.1:58775175-58775194 | None:intergenic | 30.0% | |
| AATCTCACTTCCAACATTTA+AGG | - | chr3.1:58775501-58775520 | None:intergenic | 30.0% | |
| AATCTGATGATTAGGTAGTT+GGG | + | chr3.1:58775726-58775745 | MS.gene039995:intron | 30.0% | |
| AATGCTAGAGTTGTGTATTT+GGG | + | chr3.1:58773228-58773247 | MS.gene039995:CDS | 30.0% | |
| AATGTAATCATCCTTTAGAC+AGG | + | chr3.1:58775799-58775818 | MS.gene039995:intron | 30.0% | |
| AATTATACCCCCTAAATACT+TGG | - | chr3.1:58775667-58775686 | None:intergenic | 30.0% | |
| AGAGCTTGACTATGTTATTA+CGG | + | chr3.1:58776193-58776212 | MS.gene039995:CDS | 30.0% | |
| AGATTAAAATGGTAAGCACT+TGG | + | chr3.1:58774192-58774211 | MS.gene039995:intron | 30.0% | |
| ATAAAGGGCTTAAATTTGGA+AGG | - | chr3.1:58775229-58775248 | None:intergenic | 30.0% | |
| ATCTTTGTATGACTTGATCT+AGG | - | chr3.1:58774581-58774600 | None:intergenic | 30.0% | |
| ATGCATTGTATAAGACTTCA+AGG | - | chr3.1:58773934-58773953 | None:intergenic | 30.0% | |
| ATTCCATAACAAGATCTCTT+AGG | - | chr3.1:58777828-58777847 | None:intergenic | 30.0% | |
| CAATAGATAAATAGCAACCA+AGG | - | chr3.1:58773818-58773837 | None:intergenic | 30.0% | |
| CAATATATGATCTAAGGACT+TGG | + | chr3.1:58775531-58775550 | MS.gene039995:intron | 30.0% | |
| CAGTATATGATTATTGACAC+AGG | + | chr3.1:58776691-58776710 | MS.gene039995:intron | 30.0% | |
| CATTAAATATTCCCAACTTC+AGG | + | chr3.1:58778183-58778202 | MS.gene039995:intron | 30.0% | |
| CGTTCATATGAAAATGTGTA+TGG | + | chr3.1:58777657-58777676 | MS.gene039995:intron | 30.0% | |
| CTGTGTCAATAATCATATAC+TGG | - | chr3.1:58776693-58776712 | None:intergenic | 30.0% | |
| GATATTTACCATACTGCATA+AGG | - | chr3.1:58774370-58774389 | None:intergenic | 30.0% | |
| GCAACCAAAAATTCCAATTT+AGG | + | chr3.1:58777291-58777310 | MS.gene039995:intron | 30.0% | |
| GCACAACAATATATGATCTA+AGG | + | chr3.1:58775525-58775544 | MS.gene039995:intron | 30.0% | |
| GTAAATGAGTCTCACAAATA+AGG | - | chr3.1:58776928-58776947 | None:intergenic | 30.0% | |
| GTTCTCTAAATACCTGATAA+CGG | - | chr3.1:58776613-58776632 | None:intergenic | 30.0% | |
| TAAAGGGCTTAAATTTGGAA+GGG | - | chr3.1:58775228-58775247 | None:intergenic | 30.0% | |
| TAAGATAAACTTGACTGTCA+TGG | + | chr3.1:58773891-58773910 | MS.gene039995:intron | 30.0% | |
| TACAAAATATGCTTGATGGA+GGG | + | chr3.1:58774858-58774877 | MS.gene039995:CDS | 30.0% | |
| TAGGAAAGGAATGATAAAGT+TGG | - | chr3.1:58776269-58776288 | None:intergenic | 30.0% | |
| TATATGAAAGGAGATAGTGT+TGG | - | chr3.1:58778238-58778257 | None:intergenic | 30.0% | |
| TCATATGAAAATGTGTATGG+TGG | + | chr3.1:58777660-58777679 | MS.gene039995:intron | 30.0% | |
| TCTAGCAATGACAAAAATAC+AGG | - | chr3.1:58773844-58773863 | None:intergenic | 30.0% | |
| TGACTTACCCTAGATTAAAA+TGG | + | chr3.1:58774181-58774200 | MS.gene039995:intron | 30.0% | |
| TGAGATTATTTCATCACTCT+CGG | + | chr3.1:58776028-58776047 | MS.gene039995:intron | 30.0% | |
| TTACAAAATATGCTTGATGG+AGG | + | chr3.1:58774857-58774876 | MS.gene039995:CDS | 30.0% | |
| TTATAGGGTTCAAACACAAT+CGG | - | chr3.1:58777570-58777589 | None:intergenic | 30.0% | |
| TTCTGTAGGCAATATAACTT+TGG | + | chr3.1:58775339-58775358 | MS.gene039995:intron | 30.0% | |
| TTGATATGCAGATAATTGCT+GGG | + | chr3.1:58777357-58777376 | MS.gene039995:intron | 30.0% | |
| TTTATCTTCGGTTTCAACAT+AGG | + | chr3.1:58777975-58777994 | MS.gene039995:intron | 30.0% | |
| TTTCTCATCAACAGATCTTA+AGG | + | chr3.1:58774621-58774640 | MS.gene039995:intron | 30.0% | |
| TTTGATATGCAGATAATTGC+TGG | + | chr3.1:58777356-58777375 | MS.gene039995:intron | 30.0% | |
| ! | ACAGGACAAATTTTGCAATT+TGG | + | chr3.1:58776709-58776728 | MS.gene039995:intron | 30.0% |
| ! | ATTGATTCCAAGTATTTAGG+GGG | + | chr3.1:58775657-58775676 | MS.gene039995:intron | 30.0% |
| ! | CAAAACAATTCTCTCTTTTG+AGG | - | chr3.1:58778430-58778449 | None:intergenic | 30.0% |
| ! | CAAAAGGGTGAACATAATTT+TGG | + | chr3.1:58774337-58774356 | MS.gene039995:intron | 30.0% |
| ! | CAGACCTAAATTGGAATTTT+TGG | - | chr3.1:58777298-58777317 | None:intergenic | 30.0% |
| ! | CAGTGGTAACTAGTTTAAAT+TGG | + | chr3.1:58775697-58775716 | MS.gene039995:intron | 30.0% |
| ! | CATATTTTGTAAGATGGTCT+GGG | - | chr3.1:58774849-58774868 | None:intergenic | 30.0% |
| ! | GACTTGGACTTTAAACTTTT+GGG | + | chr3.1:58775547-58775566 | MS.gene039995:intron | 30.0% |
| ! | GTTCACCCTTTTGTTAAATT+CGG | - | chr3.1:58774330-58774349 | None:intergenic | 30.0% |
| ! | TGAAGTCTTATACAATGCAT+TGG | + | chr3.1:58773934-58773953 | MS.gene039995:CDS | 30.0% |
| ! | TGTTGATAAGCGATTATCTT+TGG | + | chr3.1:58773332-58773351 | MS.gene039995:CDS | 30.0% |
| ! | TGTTTGTTAGTGATAATTGC+TGG | - | chr3.1:58776521-58776540 | None:intergenic | 30.0% |
| ! | TTCACCCTTTTGTTAAATTC+GGG | - | chr3.1:58774329-58774348 | None:intergenic | 30.0% |
| !! | AGTGCTTACCATTTTAATCT+AGG | - | chr3.1:58774192-58774211 | None:intergenic | 30.0% |
| !! | CATTGATTCCAAGTATTTAG+GGG | + | chr3.1:58775656-58775675 | MS.gene039995:intron | 30.0% |
| !! | CTTGGTTGCTATTTATCTAT+TGG | + | chr3.1:58773816-58773835 | MS.gene039995:intron | 30.0% |
| !! | GTGCTTACCATTTTAATCTA+GGG | - | chr3.1:58774191-58774210 | None:intergenic | 30.0% |
| !!! | GTTGTTTATGCACTTTTTCT+TGG | + | chr3.1:58776572-58776591 | MS.gene039995:CDS | 30.0% |
| !!! | TAGTTTTGTGATAGAAAGAG+GGG | + | chr3.1:58777737-58777756 | MS.gene039995:intron | 30.0% |
| !!! | TATCTTCTGAAATTTTCTGG+TGG | + | chr3.1:58774096-58774115 | MS.gene039995:intron | 30.0% |
| !!! | TCTTTTGAAATGCATTGTCA+GGG | - | chr3.1:58776352-58776371 | None:intergenic | 30.0% |
| !!! | TTATATTTCCTTTTGGCTTC+AGG | + | chr3.1:58775854-58775873 | MS.gene039995:intron | 30.0% |
| !!! | TTCTTTTGAAATGCATTGTC+AGG | - | chr3.1:58776353-58776372 | None:intergenic | 30.0% |
| AAAGGGCTTAAATTTGGAAG+GGG | - | chr3.1:58775227-58775246 | None:intergenic | 35.0% | |
| AATTCCTTATCATCTCGAAC+CGG | - | chr3.1:58773270-58773289 | None:intergenic | 35.0% | |
| ACAAAATATGCTTGATGGAG+GGG | + | chr3.1:58774859-58774878 | MS.gene039995:CDS | 35.0% | |
| ACGGACAATCAATTCTTACT+GGG | + | chr3.1:58777451-58777470 | MS.gene039995:CDS | 35.0% | |
| AGGTTCCCGAATTTAACAAA+AGG | + | chr3.1:58774321-58774340 | MS.gene039995:intron | 35.0% | |
| AGTCACAACTATCAACATAC+CGG | - | chr3.1:58774888-58774907 | None:intergenic | 35.0% | |
| AGTTCTCTAATAGGACTTCT+TGG | + | chr3.1:58776320-58776339 | MS.gene039995:CDS | 35.0% | |
| ATGCTAGAGTTGTGTATTTG+GGG | + | chr3.1:58773229-58773248 | MS.gene039995:CDS | 35.0% | |
| ATTGCATCAGTTGTATTTGG+TGG | + | chr3.1:58776407-58776426 | MS.gene039995:CDS | 35.0% | |
| CAAAGACTAGCAATAGAAGA+AGG | + | chr3.1:58776110-58776129 | MS.gene039995:CDS | 35.0% | |
| CACTTAATTAAGGCTCTTGT+TGG | - | chr3.1:58773518-58773537 | None:intergenic | 35.0% | |
| CATAAGATAGCAGCTTGATT+TGG | - | chr3.1:58778637-58778656 | None:intergenic | 35.0% | |
| CATAAGATTGCAGCTTGATT+TGG | - | chr3.1:58778721-58778740 | None:intergenic | 35.0% | |
| CGAATTGCATCAGTTGTATT+TGG | + | chr3.1:58776404-58776423 | MS.gene039995:CDS | 35.0% | |
| CTTAGTTACTGTCGTGAAAA+TGG | + | chr3.1:58773990-58774009 | MS.gene039995:CDS | 35.0% | |
| CTTCAAAAGGGAATTGATCT+TGG | + | chr3.1:58775879-58775898 | MS.gene039995:CDS | 35.0% | |
| GAATGCTAGAGTTGTGTATT+TGG | + | chr3.1:58773227-58773246 | MS.gene039995:CDS | 35.0% | |
| GCACATAAAGGGCTTAAATT+TGG | - | chr3.1:58775233-58775252 | None:intergenic | 35.0% | |
| GGAGAAGATAAAGGAGAATA+CGG | + | chr3.1:58773059-58773078 | MS.gene039995:CDS | 35.0% | |
| GGTTCCCGAATTTAACAAAA+GGG | + | chr3.1:58774322-58774341 | MS.gene039995:intron | 35.0% | |
| GGTTGCAAAATCTGATGATT+AGG | + | chr3.1:58775718-58775737 | MS.gene039995:intron | 35.0% | |
| GTATGTTGACATTTGAAAGC+AGG | + | chr3.1:58776740-58776759 | MS.gene039995:intron | 35.0% | |
| GTGCAGATGAAGAAATAGAA+AGG | - | chr3.1:58777170-58777189 | None:intergenic | 35.0% | |
| TAATCATCCTTTAGACAGGA+TGG | + | chr3.1:58775803-58775822 | MS.gene039995:intron | 35.0% | |
| TACCACAAAAAATCAGCAAC+AGG | - | chr3.1:58775046-58775065 | None:intergenic | 35.0% | |
| TATGTTGAAAGGGTGAATGA+TGG | + | chr3.1:58774412-58774431 | MS.gene039995:intron | 35.0% | |
| TATTAGCACAGTATCAGAAG+CGG | + | chr3.1:58776153-58776172 | MS.gene039995:CDS | 35.0% | |
| TCAAAGCAATTTCTGCTACA+GGG | - | chr3.1:58775082-58775101 | None:intergenic | 35.0% | |
| TCACGACAGTAACTAAGAAT+AGG | - | chr3.1:58773987-58774006 | None:intergenic | 35.0% | |
| TCACTAACAAACAGATTGCA+AGG | + | chr3.1:58776528-58776547 | MS.gene039995:CDS | 35.0% | |
| TGAACGCTTGATTGTGAAAT+TGG | - | chr3.1:58777643-58777662 | None:intergenic | 35.0% | |
| TGAATGATGGCAAGAGAATT+AGG | + | chr3.1:58774425-58774444 | MS.gene039995:intron | 35.0% | |
| TGATATGCAGATAATTGCTG+GGG | + | chr3.1:58777358-58777377 | MS.gene039995:intron | 35.0% | |
| TGATCTTGGTTTAGTATCAC+CGG | + | chr3.1:58775893-58775912 | MS.gene039995:CDS | 35.0% | |
| TGGTGAAATGTTAATTGACG+TGG | + | chr3.1:58775402-58775421 | MS.gene039995:intron | 35.0% | |
| TGTGAGACTCATTTACAAAG+TGG | + | chr3.1:58776932-58776951 | MS.gene039995:intron | 35.0% | |
| TTGCAACTTACAATCCTTCA+GGG | + | chr3.1:58777087-58777106 | MS.gene039995:intron | 35.0% | |
| ! | ACTTTTAATCTCATCGATGC+TGG | - | chr3.1:58778761-58778780 | None:intergenic | 35.0% |
| ! | GCATATTTTGTAAGATGGTC+TGG | - | chr3.1:58774850-58774869 | None:intergenic | 35.0% |
| ! | GGACTTGGACTTTAAACTTT+TGG | + | chr3.1:58775546-58775565 | MS.gene039995:intron | 35.0% |
| ! | TGATTTGGAGAATCTGATGA+AGG | - | chr3.1:58778706-58778725 | None:intergenic | 35.0% |
| ! | TGATTTGGAGAATCTGATGT+AGG | - | chr3.1:58778622-58778641 | None:intergenic | 35.0% |
| !! | AGATAGTGTTGGTGAAATAC+GGG | - | chr3.1:58778227-58778246 | None:intergenic | 35.0% |
| !! | GAGATAGTGTTGGTGAAATA+CGG | - | chr3.1:58778228-58778247 | None:intergenic | 35.0% |
| !! | TGGACTTTAAACTTTTGGGA+TGG | + | chr3.1:58775551-58775570 | MS.gene039995:intron | 35.0% |
| !! | TTGTTGATTTCTTCACAGTG+TGG | + | chr3.1:58776234-58776253 | MS.gene039995:CDS | 35.0% |
| !!! | AATTGTCGGAGTTTTTGGTT+CGG | - | chr3.1:58772841-58772860 | None:intergenic | 35.0% |
| !!! | ACAACTGCTGTTTTGAGTAT+CGG | - | chr3.1:58776557-58776576 | None:intergenic | 35.0% |
| !!! | GGACTTTAAACTTTTGGGAT+GGG | + | chr3.1:58775552-58775571 | MS.gene039995:intron | 35.0% |
| !!! | TTCCTGTTGCTGATTTTTTG+TGG | + | chr3.1:58775041-58775060 | MS.gene039995:CDS | 35.0% |
| !!! | TTTTCTGGTGGTGGTTAATT+AGG | + | chr3.1:58774108-58774127 | MS.gene039995:intron | 35.0% |
| AAAGAGGGGAAATTCACTTC+TGG | + | chr3.1:58777751-58777770 | MS.gene039995:intron | 40.0% | |
| AAATTATATGCACCTCCAGC+CGG | + | chr3.1:58774689-58774708 | MS.gene039995:CDS | 40.0% | |
| AAGAAGTTCTGCAATACCTC+CGG | - | chr3.1:58775915-58775934 | None:intergenic | 40.0% | |
| AAGCTCATATCTATCTGCAC+AGG | + | chr3.1:58774796-58774815 | MS.gene039995:CDS | 40.0% | |
| AAGGGCTTAAATTTGGAAGG+GGG | - | chr3.1:58775226-58775245 | None:intergenic | 40.0% | |
| AGATATGAGCTTGGACCAAA+AGG | - | chr3.1:58774788-58774807 | None:intergenic | 40.0% | |
| AGCTTCCTTTCTTCTTTCTG+CGG | + | chr3.1:58773014-58773033 | MS.gene039995:CDS | 40.0% | |
| AGGATGGTGTCTGCTATTAT+TGG | + | chr3.1:58775819-58775838 | MS.gene039995:intron | 40.0% | |
| AGTCCATATTTCCCTGAAGT+TGG | - | chr3.1:58778198-58778217 | None:intergenic | 40.0% | |
| ATAAACTTGACTGTCATGGC+AGG | + | chr3.1:58773895-58773914 | MS.gene039995:intron | 40.0% | |
| ATATATGATGCAACGGCGAT+AGG | + | chr3.1:58773153-58773172 | MS.gene039995:CDS | 40.0% | |
| ATCTGCAAATCTCCGTTATC+AGG | + | chr3.1:58776598-58776617 | MS.gene039995:CDS | 40.0% | |
| CACGGACAATCAATTCTTAC+TGG | + | chr3.1:58777450-58777469 | MS.gene039995:CDS | 40.0% | |
| CATTTCAAAAGAACCCAGTG+GGG | + | chr3.1:58776360-58776379 | MS.gene039995:CDS | 40.0% | |
| CCAAAAGGAAACGACAGATT+TGG | - | chr3.1:58774773-58774792 | None:intergenic | 40.0% | |
| CGGACAATCAATTCTTACTG+GGG | + | chr3.1:58777452-58777471 | MS.gene039995:CDS | 40.0% | |
| CGTCCTAAGAGATCTTGTTA+TGG | + | chr3.1:58777822-58777841 | MS.gene039995:intron | 40.0% | |
| CTGAAGGATTGTAAGTTGCA+AGG | - | chr3.1:58777088-58777107 | None:intergenic | 40.0% | |
| CTTCTTGATACAGGGTTTCA+GGG | + | chr3.1:58776058-58776077 | MS.gene039995:intron | 40.0% | |
| CTTGCAACTTACAATCCTTC+AGG | + | chr3.1:58777086-58777105 | MS.gene039995:intron | 40.0% | |
| GAAACTTGCCTTATGCAGTA+TGG | + | chr3.1:58774359-58774378 | MS.gene039995:intron | 40.0% | |
| GATAAAGGAGAATACGGTGT+CGG | + | chr3.1:58773065-58773084 | MS.gene039995:CDS | 40.0% | |
| GCATTTCAAAAGAACCCAGT+GGG | + | chr3.1:58776359-58776378 | MS.gene039995:CDS | 40.0% | |
| GCTATCTTATGCAACTCTAC+CGG | + | chr3.1:58778646-58778665 | MS.gene039995:CDS | 40.0% | |
| GGAGCCACTTAATCAGTATA+TGG | + | chr3.1:58773383-58773402 | MS.gene039995:CDS | 40.0% | |
| GGTTCGAGATGATAAGGAAT+TGG | + | chr3.1:58773269-58773288 | MS.gene039995:CDS | 40.0% | |
| GTAGCAGAAATTGCTTTGAC+CGG | + | chr3.1:58775083-58775102 | MS.gene039995:CDS | 40.0% | |
| GTCAAAGCAATTTCTGCTAC+AGG | - | chr3.1:58775083-58775102 | None:intergenic | 40.0% | |
| GTCCATATTTCCCTGAAGTT+GGG | - | chr3.1:58778197-58778216 | None:intergenic | 40.0% | |
| GTCGAGGATATATGATGCAA+CGG | + | chr3.1:58773146-58773165 | MS.gene039995:CDS | 40.0% | |
| GTCTGCTGTGTAGTTATTTG+AGG | + | chr3.1:58777193-58777212 | MS.gene039995:intron | 40.0% | |
| GTGGGTCTCACTAAATTATG+CGG | + | chr3.1:58776894-58776913 | MS.gene039995:intron | 40.0% | |
| TAACAATTGCCTTAATGGCC+AGG | + | chr3.1:58777946-58777965 | MS.gene039995:intron | 40.0% | |
| TAGCAGAAATTGCTTTGACC+GGG | + | chr3.1:58775084-58775103 | MS.gene039995:CDS | 40.0% | |
| TCTTCTTGATACAGGGTTTC+AGG | + | chr3.1:58776057-58776076 | MS.gene039995:intron | 40.0% | |
| TGAAGCAACGGTTGTTAAAC+CGG | + | chr3.1:58773089-58773108 | MS.gene039995:CDS | 40.0% | |
| TGCATTTCAAAAGAACCCAG+TGG | + | chr3.1:58776358-58776377 | MS.gene039995:CDS | 40.0% | |
| TGCTAGAGTTGTGTATTTGG+GGG | + | chr3.1:58773230-58773249 | MS.gene039995:CDS | 40.0% | |
| TGGCTTCAGGATCTTCAAAA+GGG | + | chr3.1:58775867-58775886 | MS.gene039995:intron | 40.0% | |
| TGGGTCTCACTAAATTATGC+GGG | + | chr3.1:58776895-58776914 | MS.gene039995:intron | 40.0% | |
| TGTGCAGATAGATATGAGCT+TGG | - | chr3.1:58774797-58774816 | None:intergenic | 40.0% | |
| TTATTTCATCACTCTCGGTC+TGG | + | chr3.1:58776033-58776052 | MS.gene039995:intron | 40.0% | |
| TTCCAATTTAGGTCTGCAAC+TGG | + | chr3.1:58777302-58777321 | MS.gene039995:intron | 40.0% | |
| TTCCCAACTTCAGGGAAATA+TGG | + | chr3.1:58778192-58778211 | MS.gene039995:intron | 40.0% | |
| TTGAAATGCATTGTCAGGGA+TGG | - | chr3.1:58776348-58776367 | None:intergenic | 40.0% | |
| TTGAAGATCCTGAAGCCAAA+AGG | - | chr3.1:58775865-58775884 | None:intergenic | 40.0% | |
| TTGACTCATCAGCATAGGAA+AGG | - | chr3.1:58776283-58776302 | None:intergenic | 40.0% | |
| TTGGAAGCTTCGCTAACAAT+AGG | - | chr3.1:58777624-58777643 | None:intergenic | 40.0% | |
| TTGGCTTCAGGATCTTCAAA+AGG | + | chr3.1:58775866-58775885 | MS.gene039995:intron | 40.0% | |
| TTGGTAAATTGCTGCAGCAA+TGG | + | chr3.1:58778539-58778558 | MS.gene039995:intron | 40.0% | |
| TTTGGAGAATCTGATGAAGG+TGG | - | chr3.1:58778703-58778722 | None:intergenic | 40.0% | |
| TTTGGAGAATCTGATGTAGG+TGG | - | chr3.1:58778619-58778638 | None:intergenic | 40.0% | |
| ! | CAATCGGCTTACTTAAGATG+AGG | - | chr3.1:58777554-58777573 | None:intergenic | 40.0% |
| ! | TGAAAATGTGTATGGTGGAG+TGG | + | chr3.1:58777665-58777684 | MS.gene039995:intron | 40.0% |
| ! | TGCGAAATTGTCGGAGTTTT+TGG | - | chr3.1:58772846-58772865 | None:intergenic | 40.0% |
| !! | AGGAATGATAAAGTTGGTGC+AGG | - | chr3.1:58776263-58776282 | None:intergenic | 40.0% |
| !! | AGGCACTGATACAAGATACA+TGG | - | chr3.1:58775304-58775323 | None:intergenic | 40.0% |
| !! | CCAAATCTGTCGTTTCCTTT+TGG | + | chr3.1:58774770-58774789 | MS.gene039995:CDS | 40.0% |
| !! | GCTAGTCTTTGCAAGAACTT+GGG | - | chr3.1:58776101-58776120 | None:intergenic | 40.0% |
| !! | GGTATGTTGATAGTTGTGAC+TGG | + | chr3.1:58774887-58774906 | MS.gene039995:CDS | 40.0% |
| !! | GTCTGGTTCTTCTTGATACA+GGG | + | chr3.1:58776050-58776069 | MS.gene039995:intron | 40.0% |
| !! | TGCTAGTCTTTGCAAGAACT+TGG | - | chr3.1:58776102-58776121 | None:intergenic | 40.0% |
| !!! | CTTCTGAAATTTTCTGGTGG+TGG | + | chr3.1:58774099-58774118 | MS.gene039995:intron | 40.0% |
| !!! | GGGTTTTAGACAGAGTTGTA+TGG | + | chr3.1:58774488-58774507 | MS.gene039995:intron | 40.0% |
| AAACTAGTTACCACTGCCGA+TGG | - | chr3.1:58775693-58775712 | None:intergenic | 45.0% | |
| AAATCTTCACGACAGCAGGT+TGG | - | chr3.1:58775438-58775457 | None:intergenic | 45.0% | |
| AAATGCCAACCTGGCCATTA+AGG | - | chr3.1:58777958-58777977 | None:intergenic | 45.0% | |
| AACAATACCGAACACCACGA+CGG | + | chr3.1:58772907-58772926 | MS.gene039995:CDS | 45.0% | |
| AAGAAGAAAGGAAGCTCCAG+CGG | - | chr3.1:58773010-58773029 | None:intergenic | 45.0% | |
| AAGATGAGTCTGGGAAGGTA+CGG | - | chr3.1:58772812-58772831 | None:intergenic | 45.0% | |
| AATCTTCACGACAGCAGGTT+GGG | - | chr3.1:58775437-58775456 | None:intergenic | 45.0% | |
| AATTGCCTTAATGGCCAGGT+TGG | + | chr3.1:58777950-58777969 | MS.gene039995:intron | 45.0% | |
| ACATATGGAGCTAGAGGAAC+TGG | + | chr3.1:58774923-58774942 | MS.gene039995:CDS | 45.0% | |
| ACCGAAGATAAATGCCAACC+TGG | - | chr3.1:58777967-58777986 | None:intergenic | 45.0% | |
| AGATTCCAATTTGTCCCCAC+TGG | - | chr3.1:58776377-58776396 | None:intergenic | 45.0% | |
| ATATGGAGCTAGAGGAACTG+GGG | + | chr3.1:58774925-58774944 | MS.gene039995:CDS | 45.0% | |
| ATCATGGCGCAAGTGACATA+GGG | - | chr3.1:58773694-58773713 | None:intergenic | 45.0% | |
| CAAGTGACATAGGGTGCATT+TGG | - | chr3.1:58773685-58773704 | None:intergenic | 45.0% | |
| CACAACTATCAACATACCGG+TGG | - | chr3.1:58774885-58774904 | None:intergenic | 45.0% | |
| CATATGGAGCTAGAGGAACT+GGG | + | chr3.1:58774924-58774943 | MS.gene039995:CDS | 45.0% | |
| CATGTCACATATGGAGCTAG+AGG | + | chr3.1:58774917-58774936 | MS.gene039995:CDS | 45.0% | |
| GAAATGGCCAACTAACCTGT+GGG | - | chr3.1:58775159-58775178 | None:intergenic | 45.0% | |
| GAGTACCACAAGCAACAAGA+CGG | - | chr3.1:58774019-58774038 | None:intergenic | 45.0% | |
| GATTCCAATTTGTCCCCACT+GGG | - | chr3.1:58776376-58776395 | None:intergenic | 45.0% | |
| GGCGAATGAACTGTCTTTCT+GGG | - | chr3.1:58775009-58775028 | None:intergenic | 45.0% | |
| GGGTTTCAGGGAAAGATTGT+TGG | + | chr3.1:58776070-58776089 | MS.gene039995:intron | 45.0% | |
| GTACAAATCTTCACGACAGC+AGG | - | chr3.1:58775442-58775461 | None:intergenic | 45.0% | |
| GTGTTCGGTATTGTTAGCTG+CGG | - | chr3.1:58772902-58772921 | None:intergenic | 45.0% | |
| GTTATTACGGACACTGTCAG+AGG | + | chr3.1:58776206-58776225 | MS.gene039995:CDS | 45.0% | |
| TAACCAACTTCACGCTGATG+AGG | + | chr3.1:58774534-58774553 | MS.gene039995:intron | 45.0% | |
| TAAGGACTGTCCAAGCAGAA+GGG | + | chr3.1:58774639-58774658 | MS.gene039995:CDS | 45.0% | |
| TATAATTGAGCCATCGGCAG+TGG | + | chr3.1:58775680-58775699 | MS.gene039995:intron | 45.0% | |
| TATCATGGCGCAAGTGACAT+AGG | - | chr3.1:58773695-58773714 | None:intergenic | 45.0% | |
| TCTATCTTCTTCACCTCCTC+CGG | - | chr3.1:58773111-58773130 | None:intergenic | 45.0% | |
| TCTTAGGACGCTCTTAGACA+AGG | - | chr3.1:58777812-58777831 | None:intergenic | 45.0% | |
| TCTTGGTTTAGTATCACCGG+AGG | + | chr3.1:58775896-58775915 | MS.gene039995:CDS | 45.0% | |
| TTAAGGACTGTCCAAGCAGA+AGG | + | chr3.1:58774638-58774657 | MS.gene039995:CDS | 45.0% | |
| ! | AGCTTTTCCTGCTGATCTTC+AGG | + | chr3.1:58773362-58773381 | MS.gene039995:CDS | 45.0% |
| ! | AGGGGGTATAATTGAGCCAT+CGG | + | chr3.1:58775674-58775693 | MS.gene039995:intron | 45.0% |
| ! | AGTTCCGGTTCGAGATGATA+AGG | + | chr3.1:58773263-58773282 | MS.gene039995:CDS | 45.0% |
| ! | CGCAATTGACTCATCAGCAT+AGG | - | chr3.1:58776288-58776307 | None:intergenic | 45.0% |
| ! | CTCTAGCTCCATATGTGACA+TGG | - | chr3.1:58774919-58774938 | None:intergenic | 45.0% |
| ! | GAAAGAGAGAGGGAAAGTGT+GGG | + | chr3.1:58773194-58773213 | MS.gene039995:CDS | 45.0% |
| ! | GCCAGGTTGGCATTTATCTT+CGG | + | chr3.1:58777963-58777982 | MS.gene039995:intron | 45.0% |
| ! | GGGCAATGAGAGCACATAAA+GGG | - | chr3.1:58775244-58775263 | None:intergenic | 45.0% |
| ! | GGTCTTTGTAACTTGCAGTC+CGG | - | chr3.1:58778668-58778687 | None:intergenic | 45.0% |
| ! | GTTTTGCGGTGCGAAATTGT+CGG | - | chr3.1:58772855-58772874 | None:intergenic | 45.0% |
| ! | TCCAAGCAGAAGGGATTAGT+GGG | + | chr3.1:58774648-58774667 | MS.gene039995:CDS | 45.0% |
| ! | TGGGCAATGAGAGCACATAA+AGG | - | chr3.1:58775245-58775264 | None:intergenic | 45.0% |
| ! | TGTGCTCTCATTGCCCATTT+TGG | + | chr3.1:58775248-58775267 | MS.gene039995:intron | 45.0% |
| ! | TTTGGTGGTCTAAAACTCGC+TGG | + | chr3.1:58776422-58776441 | MS.gene039995:CDS | 45.0% |
| !! | AGGGATTAGTGGGCTAACAA+AGG | + | chr3.1:58774658-58774677 | MS.gene039995:CDS | 45.0% |
| !! | GGTCTGGTTCTTCTTGATAC+AGG | + | chr3.1:58776049-58776068 | MS.gene039995:intron | 45.0% |
| !! | TGAGTGAGTTCTGAAAGCAG+AGG | - | chr3.1:58775954-58775973 | None:intergenic | 45.0% |
| AACGGTTGTTAAACCGGAGG+AGG | + | chr3.1:58773095-58773114 | MS.gene039995:CDS | 50.0% | |
| AAGACAGTTCATTCGCCGTG+AGG | + | chr3.1:58775012-58775031 | MS.gene039995:CDS | 50.0% | |
| ACTTGACTGTCATGGCAGGA+TGG | + | chr3.1:58773899-58773918 | MS.gene039995:intron | 50.0% | |
| AGAACCCAGTGGGGACAAAT+TGG | + | chr3.1:58776369-58776388 | MS.gene039995:CDS | 50.0% | |
| AGAACTCACTCACCGTTTCC+AGG | + | chr3.1:58775962-58775981 | MS.gene039995:CDS | 50.0% | |
| AGACAGTTCATTCGCCGTGA+GGG | + | chr3.1:58775013-58775032 | MS.gene039995:CDS | 50.0% | |
| AGCAACGGTTGTTAAACCGG+AGG | + | chr3.1:58773092-58773111 | MS.gene039995:CDS | 50.0% | |
| ATAGGTGAACCGTTGGCGAT+AGG | + | chr3.1:58773171-58773190 | MS.gene039995:CDS | 50.0% | |
| ATTTCTGCTACAGGGTCTGG+CGG | - | chr3.1:58775074-58775093 | None:intergenic | 50.0% | |
| CAACAGGAACTTCTCCCTCA+CGG | - | chr3.1:58775030-58775049 | None:intergenic | 50.0% | |
| CAATTCTTACTGGGGAACGC+AGG | + | chr3.1:58777460-58777479 | MS.gene039995:CDS | 50.0% | |
| CGAAATGGCCAACTAACCTG+TGG | - | chr3.1:58775160-58775179 | None:intergenic | 50.0% | |
| CGGCGAATGAACTGTCTTTC+TGG | - | chr3.1:58775010-58775029 | None:intergenic | 50.0% | |
| CGGTGAAAGTAAGTCACGTG+CGG | - | chr3.1:58772772-58772791 | None:intergenic | 50.0% | |
| CTCGGGTTATGAATGCTGCT+GGG | + | chr3.1:58775116-58775135 | MS.gene039995:CDS | 50.0% | |
| CTCTCTTTCCCTATCGCCAA+CGG | - | chr3.1:58773183-58773202 | None:intergenic | 50.0% | |
| GAACACCACGACGGAAACAA+CGG | + | chr3.1:58772916-58772935 | MS.gene039995:CDS | 50.0% | |
| GAAGCTCCAGCGGCTAAAAA+CGG | - | chr3.1:58773000-58773019 | None:intergenic | 50.0% | |
| GAATCTGATGAAGGTGGCTC+AGG | - | chr3.1:58778697-58778716 | None:intergenic | 50.0% | |
| GAATCTGATGTAGGTGGCTC+AGG | - | chr3.1:58778613-58778632 | None:intergenic | 50.0% | |
| GATCCTCATCAGCGTGAAGT+TGG | - | chr3.1:58774540-58774559 | None:intergenic | 50.0% | |
| GCAATTTCTGCTACAGGGTC+TGG | - | chr3.1:58775077-58775096 | None:intergenic | 50.0% | |
| GCAGACACCATCCTGTCTAA+AGG | - | chr3.1:58775813-58775832 | None:intergenic | 50.0% | |
| GCAGATAATTGCTGGGGTTG+TGG | + | chr3.1:58777364-58777383 | MS.gene039995:intron | 50.0% | |
| GCCTGATATGAAGCCTGAAC+CGG | - | chr3.1:58774711-58774730 | None:intergenic | 50.0% | |
| GGAAAGAGAGAGGGAAAGTG+TGG | + | chr3.1:58773193-58773212 | MS.gene039995:CDS | 50.0% | |
| GGAGGAGGTGAAGAAGATAG+AGG | + | chr3.1:58773110-58773129 | MS.gene039995:CDS | 50.0% | |
| GGAGGTGAAGAAGATAGAGG+AGG | + | chr3.1:58773113-58773132 | MS.gene039995:CDS | 50.0% | |
| GGCCAGTTGCAGACCTAAAT+TGG | - | chr3.1:58777307-58777326 | None:intergenic | 50.0% | |
| GGTATTGTTAGCTGCGGTGA+TGG | - | chr3.1:58772896-58772915 | None:intergenic | 50.0% | |
| GGTGCAAGCCATGTCACATA+TGG | + | chr3.1:58774908-58774927 | MS.gene039995:CDS | 50.0% | |
| GTCCAAGCAGAAGGGATTAG+TGG | + | chr3.1:58774647-58774666 | MS.gene039995:CDS | 50.0% | |
| GTTCTCCAGTACGAAGCAAC+CGG | + | chr3.1:58772956-58772975 | MS.gene039995:CDS | 50.0% | |
| TAACCCGAGCAATCTCAACC+CGG | - | chr3.1:58775105-58775124 | None:intergenic | 50.0% | |
| TACAATCCTTCAGGGCTCAC+TGG | + | chr3.1:58777095-58777114 | MS.gene039995:intron | 50.0% | |
| TAGGTGAACCGTTGGCGATA+GGG | + | chr3.1:58773172-58773191 | MS.gene039995:CDS | 50.0% | |
| TCATACTCCTGCCATCGTTC+AGG | - | chr3.1:58773963-58773982 | None:intergenic | 50.0% | |
| TCTATCTGCACAGGCTAGAG+TGG | + | chr3.1:58774805-58774824 | MS.gene039995:CDS | 50.0% | |
| TGAAAGTAAGTCACGTGCGG+CGG | - | chr3.1:58772769-58772788 | None:intergenic | 50.0% | |
| TGCTTGTGGTACTCCACTGA+AGG | + | chr3.1:58774025-58774044 | MS.gene039995:CDS | 50.0% | |
| TGGCGATAGGGAAAGAGAGA+GGG | + | chr3.1:58773184-58773203 | MS.gene039995:CDS | 50.0% | |
| TTGGCGATAGGGAAAGAGAG+AGG | + | chr3.1:58773183-58773202 | MS.gene039995:CDS | 50.0% | |
| ! | AGGAGGAAGTGATAACGTCG+AGG | + | chr3.1:58773130-58773149 | MS.gene039995:CDS | 50.0% |
| ! | GGAATCCGTCTTGTTGCTTG+TGG | + | chr3.1:58774011-58774030 | MS.gene039995:CDS | 50.0% |
| ! | GTTGTTTCCGTCGTGGTGTT+CGG | - | chr3.1:58772917-58772936 | None:intergenic | 50.0% |
| ! | TTGACCGGGTTGAGATTGCT+CGG | + | chr3.1:58775098-58775117 | MS.gene039995:CDS | 50.0% |
| !! | TACGGTGTCGGTTGAAGCAA+CGG | + | chr3.1:58773077-58773096 | MS.gene039995:CDS | 50.0% |
| !!! | TGTCGGAGTTTTTGGTTCGG+AGG | - | chr3.1:58772838-58772857 | None:intergenic | 50.0% |
| AACGGCGATAGGTGAACCGT+TGG | + | chr3.1:58773164-58773183 | MS.gene039995:CDS | 55.0% | |
| AGTGGCTCCTGAAGATCAGC+AGG | - | chr3.1:58773372-58773391 | None:intergenic | 55.0% | |
| ATGCCCTCCCACAGGTTAGT+TGG | + | chr3.1:58775149-58775168 | MS.gene039995:intron | 55.0% | |
| ATGGCCAACTAACCTGTGGG+AGG | - | chr3.1:58775156-58775175 | None:intergenic | 55.0% | |
| ATTGACCTCGCACGCTCTAC+TGG | + | chr3.1:58778562-58778581 | MS.gene039995:CDS | 55.0% | |
| CAGTATCCAGTGAGCCCTGA+AGG | - | chr3.1:58777104-58777123 | None:intergenic | 55.0% | |
| CGGAGGTGGAAGATGAGTCT+GGG | - | chr3.1:58772821-58772840 | None:intergenic | 55.0% | |
| CGTCGCCGCAGAAAGAAGAA+AGG | - | chr3.1:58773022-58773041 | None:intergenic | 55.0% | |
| GAAAGTAAGTCACGTGCGGC+GGG | - | chr3.1:58772768-58772787 | None:intergenic | 55.0% | |
| GACTGTCATGGCAGGATGGA+TGG | + | chr3.1:58773903-58773922 | MS.gene039995:intron | 55.0% | |
| GATATGAAGCCTGAACCGGC+TGG | - | chr3.1:58774707-58774726 | None:intergenic | 55.0% | |
| GCCCACTAATCCCTTCTGCT+TGG | - | chr3.1:58774652-58774671 | None:intergenic | 55.0% | |
| GCGAAAGAAGCCTGGGCATT+GGG | - | chr3.1:58772739-58772758 | None:intergenic | 55.0% | |
| GCTCGGGTTATGAATGCTGC+TGG | + | chr3.1:58775115-58775134 | MS.gene039995:CDS | 55.0% | |
| GGCGGAGGAGGAGAAGATAA+AGG | + | chr3.1:58773050-58773069 | MS.gene039995:CDS | 55.0% | |
| GGGGGAAGCTGAACAAGTTC+CGG | + | chr3.1:58773248-58773267 | MS.gene039995:CDS | 55.0% | |
| GGTGGAAGATGAGTCTGGGA+AGG | - | chr3.1:58772817-58772836 | None:intergenic | 55.0% | |
| TACTCCTGCCATCGTTCAGG+CGG | - | chr3.1:58773960-58773979 | None:intergenic | 55.0% | |
| TCGGAGGTGGAAGATGAGTC+TGG | - | chr3.1:58772822-58772841 | None:intergenic | 55.0% | |
| TCTTTCTGCGGCGACGACAA+GGG | + | chr3.1:58773026-58773045 | MS.gene039995:CDS | 55.0% | |
| TGAAGGTGGCTCAGGTGACT+CGG | - | chr3.1:58778689-58778708 | None:intergenic | 55.0% | |
| TGAATGCTGCTGGGCAGAGA+CGG | + | chr3.1:58775125-58775144 | MS.gene039995:CDS | 55.0% | |
| TGATGGAGAGGTTGACACGG+CGG | - | chr3.1:58772879-58772898 | None:intergenic | 55.0% | |
| TGGCCAACTAACCTGTGGGA+GGG | - | chr3.1:58775155-58775174 | None:intergenic | 55.0% | |
| TGTAGGTGGCTCAGGTGACT+CGG | - | chr3.1:58778605-58778624 | None:intergenic | 55.0% | |
| TTCTTTCTGCGGCGACGACA+AGG | + | chr3.1:58773025-58773044 | MS.gene039995:CDS | 55.0% | |
| TTGCTGGGGTTGTGGAGCAT+CGG | + | chr3.1:58777372-58777391 | MS.gene039995:CDS | 55.0% | |
| ! | GCCGGTTCAGGCTTCATATC+AGG | + | chr3.1:58774707-58774726 | MS.gene039995:CDS | 55.0% |
| ! | GGTCTAAAACTCGCTGGCGT+TGG | + | chr3.1:58776428-58776447 | MS.gene039995:CDS | 55.0% |
| ! | TGACCGGGTTGAGATTGCTC+GGG | + | chr3.1:58775099-58775118 | MS.gene039995:CDS | 55.0% |
| !! | CGGTGATGGAGAGGTTGACA+CGG | - | chr3.1:58772882-58772901 | None:intergenic | 55.0% |
| !! | TGTTAGCTGCGGTGATGGAG+AGG | - | chr3.1:58772891-58772910 | None:intergenic | 55.0% |
| !!! | CGGAGTTTTTGGTTCGGAGG+TGG | - | chr3.1:58772835-58772854 | None:intergenic | 55.0% |
| ATGAAGCCTGAACCGGCTGG+AGG | - | chr3.1:58774704-58774723 | None:intergenic | 60.0% | |
| ATGCTTGATGGAGGGGCCAC+CGG | + | chr3.1:58774866-58774885 | MS.gene039995:CDS | 60.0% | |
| CGGCACGTGAGACAGTTACG+CGG | - | chr3.1:58772792-58772811 | None:intergenic | 60.0% | |
| GAATGCTGCTGGGCAGAGAC+GGG | + | chr3.1:58775126-58775145 | MS.gene039995:CDS | 60.0% | |
| GCCTGTGGCGAAAGAAGCCT+GGG | - | chr3.1:58772746-58772765 | None:intergenic | 60.0% | |
| GGCGAAAGAAGCCTGGGCAT+TGG | - | chr3.1:58772740-58772759 | None:intergenic | 60.0% | |
| ! | GTTGACACGGCGGCGTTTTG+CGG | - | chr3.1:58772869-58772888 | None:intergenic | 60.0% |
| ! | TATGCACCTCCAGCCGGTTC+AGG | + | chr3.1:58774695-58774714 | MS.gene039995:CDS | 60.0% |
| ! | TGCATTGGCCGCCTGAACGA+TGG | + | chr3.1:58773949-58773968 | MS.gene039995:CDS | 60.0% |
| !! | CAACCGGCGAGGAGTGTTGA+TGG | + | chr3.1:58772972-58772991 | MS.gene039995:CDS | 60.0% |
| !!! | ATGGCGCCGTTTTTAGCCGC+TGG | + | chr3.1:58772991-58773010 | MS.gene039995:CDS | 60.0% |
| CCAGTACGAAGCAACCGGCG+AGG | + | chr3.1:58772961-58772980 | MS.gene039995:CDS | 65.0% | |
| GCAGTCCAGTAGAGCGTGCG+AGG | - | chr3.1:58778570-58778589 | None:intergenic | 65.0% | |
| GCCCAGGCTTCTTTCGCCAC+AGG | + | chr3.1:58772742-58772761 | MS.gene039995:CDS | 65.0% | |
| GCGCCATCAACACTCCTCGC+CGG | - | chr3.1:58772978-58772997 | None:intergenic | 65.0% | |
| GGCCTGTGGCGAAAGAAGCC+TGG | - | chr3.1:58772747-58772766 | None:intergenic | 65.0% | |
| TTCTGCGGCGACGACAAGGG+CGG | + | chr3.1:58773029-58773048 | MS.gene039995:CDS | 65.0% | |
| TTGGCCGCCTGAACGATGGC+AGG | + | chr3.1:58773953-58773972 | MS.gene039995:CDS | 65.0% | |
| ! | CCTCGCCGGTTGCTTCGTAC+TGG | - | chr3.1:58772964-58772983 | None:intergenic | 65.0% |
| ! | CGACGCCGTTGTTTCCGTCG+TGG | - | chr3.1:58772924-58772943 | None:intergenic | 65.0% |
| GAGACGGGATGCCCTCCCAC+AGG | + | chr3.1:58775141-58775160 | MS.gene039995:CDS | 70.0% | |
| AGTCACGTGCGGCGGGCCTG+TGG | - | chr3.1:58772761-58772780 | None:intergenic | 75.0% | |
| GACGACAAGGGCGGCGGAGG+AGG | + | chr3.1:58773038-58773057 | MS.gene039995:CDS | 75.0% | |
| TGCGGCGACGACAAGGGCGG+CGG | + | chr3.1:58773032-58773051 | MS.gene039995:CDS | 75.0% | |
| ! | GGCGACGACAAGGGCGGCGG+AGG | + | chr3.1:58773035-58773054 | MS.gene039995:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 58772730 | 58778786 | 58772730 | ID=MS.gene039995 |
| chr3.1 | mRNA | 58772730 | 58778786 | 58772730 | ID=MS.gene039995.t1;Parent=MS.gene039995 |
| chr3.1 | exon | 58772730 | 58773412 | 58772730 | ID=MS.gene039995.t1.exon1;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58772730 | 58773412 | 58772730 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58773917 | 58774046 | 58773917 | ID=MS.gene039995.t1.exon2;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58773917 | 58774046 | 58773917 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58774635 | 58775162 | 58774635 | ID=MS.gene039995.t1.exon3;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58774635 | 58775162 | 58774635 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58775876 | 58775983 | 58775876 | ID=MS.gene039995.t1.exon4;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58775876 | 58775983 | 58775876 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58776071 | 58776619 | 58776071 | ID=MS.gene039995.t1.exon5;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58776071 | 58776619 | 58776071 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58777368 | 58777481 | 58777368 | ID=MS.gene039995.t1.exon6;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58777368 | 58777481 | 58777368 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| chr3.1 | exon | 58778556 | 58778786 | 58778556 | ID=MS.gene039995.t1.exon7;Parent=MS.gene039995.t1 |
| chr3.1 | CDS | 58778556 | 58778786 | 58778556 | ID=cds.MS.gene039995.t1;Parent=MS.gene039995.t1 |
| Gene Sequence |
| Protein sequence |
