Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008066.t1 | AFK47256.1 | 73.3 | 206 | 10 | 2 | 1 | 161 | 14 | 219 | 1.20E-63 | 252.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008066.t1 | I3T414 | 73.3 | 206 | 10 | 2 | 1 | 161 | 14 | 219 | 8.8e-64 | 252.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69234 | MS.gene008066 | PPI |
| MS.gene031986 | MS.gene008066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008066.t1 | MTR_3g070400 | 98.913 | 92 | 1 | 0 | 1 | 92 | 14 | 105 | 3.91e-55 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008066.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 3.75e-25 | 96.7 |
| MS.gene008066.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 3.75e-25 | 96.7 |
| MS.gene008066.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 9.47e-25 | 95.5 |
| MS.gene008066.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.61e-18 | 77.0 |
| MS.gene008066.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.61e-18 | 77.0 |
| MS.gene008066.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.81e-18 | 77.4 |
| MS.gene008066.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.81e-18 | 77.4 |
| MS.gene008066.t1 | AT1G80280 | 45.238 | 84 | 41 | 2 | 8 | 91 | 9 | 87 | 6.85e-16 | 74.7 |
| MS.gene008066.t1 | AT1G52750 | 41.667 | 96 | 49 | 3 | 8 | 101 | 11 | 101 | 7.26e-15 | 71.6 |
Find 28 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGATCAGTCACTCACTA+TGG | 0.333726 | 3.3:-61556111 | MS.gene008066:CDS |
| TCTCTCTTCCTGAAGAATCT+TGG | 0.338218 | 3.3:+61556137 | None:intergenic |
| CAGATTTCAGCTTGCACAAA+TGG | 0.343327 | 3.3:-61556174 | MS.gene008066:CDS |
| GTTGTTAAGGAAAGAGAAAC+AGG | 0.354501 | 3.3:+61558264 | None:intergenic |
| TAGAGAGAGAAGAAAGCTTT+TGG | 0.358985 | 3.3:-61557834 | MS.gene008066:CDS |
| CTCTCTACAACTTGTTCTAT+AGG | 0.360607 | 3.3:+61557850 | None:intergenic |
| CTCTCTTCCTGAAGAATCTT+GGG | 0.375477 | 3.3:+61556138 | None:intergenic |
| ATGAGAAGAGAGTGTTGTTA+AGG | 0.381925 | 3.3:+61558251 | None:intergenic |
| GAGGTATCCCAAGATTCTTC+AGG | 0.427863 | 3.3:-61556145 | MS.gene008066:CDS |
| TCAGCAATAACCAATAGAAC+CGG | 0.440120 | 3.3:+61558324 | None:intergenic |
| GTGTTCTTGTGCGTTGGCTG+TGG | 0.460083 | 3.3:-61557888 | MS.gene008066:CDS |
| CTACTTACAGAAAATGATGA+AGG | 0.486815 | 3.3:+61558167 | None:intergenic |
| GTTTGTGTGTTCTTGTGCGT+TGG | 0.489131 | 3.3:-61557894 | MS.gene008066:CDS |
| AGTGTTGAGAGAAGAGCTGA+AGG | 0.489499 | 3.3:+61558291 | None:intergenic |
| GGAAATGGTAGTGGCTATGT+TGG | 0.502642 | 3.3:-61557935 | MS.gene008066:intron |
| AGATTTCAGCTTGCACAAAT+GGG | 0.503541 | 3.3:-61556173 | MS.gene008066:CDS |
| TGTTCTTGTGCGTTGGCTGT+GGG | 0.508786 | 3.3:-61557887 | MS.gene008066:CDS |
| AATGATCAGTCACTCACTAT+GGG | 0.560782 | 3.3:-61556110 | MS.gene008066:CDS |
| CAGCAATAACCAATAGAACC+GGG | 0.564536 | 3.3:+61558325 | None:intergenic |
| ATCTAAAAGAATATTAAGAG+TGG | 0.588910 | 3.3:-61558403 | MS.gene008066:CDS |
| TGAAGAATCTTGGGATACCT+CGG | 0.600326 | 3.3:+61556147 | None:intergenic |
| GGATCTTATTATTGAAACGA+GGG | 0.601692 | 3.3:+61558188 | None:intergenic |
| GGCTGTGGGACATGTTGTCG+TGG | 0.612882 | 3.3:-61557873 | MS.gene008066:CDS |
| AATGGTAGTGGCTATGTTGG+AGG | 0.637532 | 3.3:-61557932 | MS.gene008066:intron |
| CTTGCACAAATGGGTATCCG+AGG | 0.640579 | 3.3:-61556164 | MS.gene008066:CDS |
| GATCTTATTATTGAAACGAG+GGG | 0.673020 | 3.3:+61558189 | None:intergenic |
| AGGATCTTATTATTGAAACG+AGG | 0.676792 | 3.3:+61558187 | None:intergenic |
| AGCAATAACCAATAGAACCG+GGG | 0.697692 | 3.3:+61558326 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATAGTATCAATTAAA+AGG | + | chr3.3:61556991-61557010 | None:intergenic | 10.0% |
| !!! | ATCTTTTTATAATTATTAAG+TGG | + | chr3.3:61558228-61558247 | None:intergenic | 10.0% |
| !!! | TCTTTTTATAATTATTAAGT+GGG | + | chr3.3:61558227-61558246 | None:intergenic | 10.0% |
| !! | ATAATAATTTACAAACATCT+AGG | - | chr3.3:61558038-61558057 | MS.gene008066:intron | 15.0% |
| !! | CTTTATCAAAATTACAAATT+TGG | + | chr3.3:61557860-61557879 | None:intergenic | 15.0% |
| !! | TACAAATTTGGATTAAAAAT+TGG | + | chr3.3:61557848-61557867 | None:intergenic | 15.0% |
| !! | TATTGATATTAGAACAAAAT+AGG | - | chr3.3:61557534-61557553 | MS.gene008066:intron | 15.0% |
| !! | TTAGTCAAAAATAAACATTA+TGG | - | chr3.3:61557046-61557065 | MS.gene008066:intron | 15.0% |
| !! | TTTAGGTAAACATATAAATA+TGG | + | chr3.3:61558282-61558301 | None:intergenic | 15.0% |
| !!! | AAAATATCAAAAGTATAACA+TGG | + | chr3.3:61558331-61558350 | None:intergenic | 15.0% |
| !!! | TTTTATTTCATTTTTGATGT+AGG | - | chr3.3:61556447-61556466 | MS.gene008066:intron | 15.0% |
| !! | AAATTTGGATTAAAAATTGG+AGG | + | chr3.3:61557845-61557864 | None:intergenic | 20.0% |
| !! | AATTTGGATTAAAAATTGGA+GGG | + | chr3.3:61557844-61557863 | None:intergenic | 20.0% |
| !! | ATCTAAAAGAATATTAAGAG+TGG | - | chr3.3:61556123-61556142 | MS.gene008066:CDS | 20.0% |
| !! | CAAAGCTGAAAAAATTAAAT+AGG | + | chr3.3:61557646-61557665 | None:intergenic | 20.0% |
| !! | CCTTTAATTAAAATCCAAAA+GGG | + | chr3.3:61556422-61556441 | None:intergenic | 20.0% |
| !! | TATTATGTATAGTCAAAATG+TGG | + | chr3.3:61558021-61558040 | None:intergenic | 20.0% |
| !! | TATTATTAATTGTTGCTAGT+GGG | + | chr3.3:61558197-61558216 | None:intergenic | 20.0% |
| !! | TGTTCTAATATCAATAAGAA+AGG | + | chr3.3:61557530-61557549 | None:intergenic | 20.0% |
| !! | TTTGAAAAATTTATGTGAGA+AGG | + | chr3.3:61556777-61556796 | None:intergenic | 20.0% |
| !!! | AATTTCATCTTTTAGAATGT+AGG | - | chr3.3:61557351-61557370 | MS.gene008066:intron | 20.0% |
| !!! | ATTTTGATAAAATCAAGACT+TGG | - | chr3.3:61557905-61557924 | MS.gene008066:CDS | 20.0% |
| !!! | CATTGATATTTTCAACATTT+TGG | - | chr3.3:61557017-61557036 | MS.gene008066:intron | 20.0% |
| !!! | CCTTTTGGATTTTAATTAAA+GGG | - | chr3.3:61556420-61556439 | MS.gene008066:intron | 20.0% |
| !!! | CTATTTAATTTTTTCAGCTT+TGG | - | chr3.3:61557644-61557663 | MS.gene008066:intron | 20.0% |
| !!! | TAGTCACATTCAATATTTTT+AGG | + | chr3.3:61558299-61558318 | None:intergenic | 20.0% |
| ! | ACTAGTATATGAATATGATG+TGG | + | chr3.3:61557774-61557793 | None:intergenic | 25.0% |
| ! | ATCGTTGTTATACACAAATA+AGG | + | chr3.3:61556519-61556538 | None:intergenic | 25.0% |
| ! | ATTTGGAAGAGTAATTCAAT+GGG | + | chr3.3:61557813-61557832 | None:intergenic | 25.0% |
| ! | CACTAGCAACAATTAATAAT+AGG | - | chr3.3:61558196-61558215 | MS.gene008066:CDS | 25.0% |
| ! | CCCTTTAATTAAAATCCAAA+AGG | + | chr3.3:61556423-61556442 | None:intergenic | 25.0% |
| ! | CTATTATTAATTGTTGCTAG+TGG | + | chr3.3:61558198-61558217 | None:intergenic | 25.0% |
| ! | GGGTATAAATGTATAATACA+TGG | - | chr3.3:61557728-61557747 | MS.gene008066:intron | 25.0% |
| ! | TATTTGGAAGAGTAATTCAA+TGG | + | chr3.3:61557814-61557833 | None:intergenic | 25.0% |
| !! | GAAGTTTCCTTGATTTTAAA+TGG | + | chr3.3:61557499-61557518 | None:intergenic | 25.0% |
| !! | GTAAGTACCATTTAAAATCA+AGG | - | chr3.3:61557489-61557508 | MS.gene008066:intron | 25.0% |
| !! | GTCTTGATTTTATCAAAATC+AGG | + | chr3.3:61557904-61557923 | None:intergenic | 25.0% |
| !! | TTAATTTTCAATGACCCTTT+TGG | - | chr3.3:61556405-61556424 | MS.gene008066:intron | 25.0% |
| !! | TTTAAAGCTGTTTATGTGTT+TGG | - | chr3.3:61556570-61556589 | MS.gene008066:intron | 25.0% |
| !! | TTTTAAATGGTACTTACGAT+AGG | + | chr3.3:61557486-61557505 | None:intergenic | 25.0% |
| !! | TTTTGAATACAGCATATATG+AGG | - | chr3.3:61557687-61557706 | MS.gene008066:intron | 25.0% |
| !!! | CCCTTTTGGATTTTAATTAA+AGG | - | chr3.3:61556419-61556438 | MS.gene008066:intron | 25.0% |
| !!! | TATTTTTTGCCTTAAGAGAA+TGG | - | chr3.3:61558128-61558147 | MS.gene008066:intron | 25.0% |
| AATATGGCATGAAAAGAACA+TGG | + | chr3.3:61558266-61558285 | None:intergenic | 30.0% | |
| AGGATCTTATTATTGAAACG+AGG | + | chr3.3:61556342-61556361 | None:intergenic | 30.0% | |
| ATATGGCATGAAAAGAACAT+GGG | + | chr3.3:61558265-61558284 | None:intergenic | 30.0% | |
| ATGTATAATACATGGCCATA+AGG | - | chr3.3:61557736-61557755 | MS.gene008066:intron | 30.0% | |
| CTACTTACAGAAAATGATGA+AGG | + | chr3.3:61556362-61556381 | None:intergenic | 30.0% | |
| GATCTTATTATTGAAACGAG+GGG | + | chr3.3:61556340-61556359 | None:intergenic | 30.0% | |
| GGATCTTATTATTGAAACGA+GGG | + | chr3.3:61556341-61556360 | None:intergenic | 30.0% | |
| GGTGTTTATAGTTTATGTGA+TGG | - | chr3.3:61556468-61556487 | MS.gene008066:intron | 30.0% | |
| TATCAATTAAAAGGTTCACG+CGG | + | chr3.3:61556982-61557001 | None:intergenic | 30.0% | |
| TGAAAAATCCAAGTAGTTTC+CGG | - | chr3.3:61557384-61557403 | MS.gene008066:intron | 30.0% | |
| TGTATAATACATGGCCATAA+GGG | - | chr3.3:61557737-61557756 | MS.gene008066:intron | 30.0% | |
| TTCAAAGAATATGTGCAAGT+GGG | - | chr3.3:61557975-61557994 | MS.gene008066:intron | 30.0% | |
| ! | AACTAATGGGAATTTTTGTG+AGG | - | chr3.3:61557447-61557466 | MS.gene008066:intron | 30.0% |
| AAATGATCAGTCACTCACTA+TGG | - | chr3.3:61558415-61558434 | MS.gene008066:CDS | 35.0% | |
| AAATGGTACTTACGATAGGT+GGG | + | chr3.3:61557482-61557501 | None:intergenic | 35.0% | |
| AATGATCAGTCACTCACTAT+GGG | - | chr3.3:61558416-61558435 | MS.gene008066:CDS | 35.0% | |
| AATTTATGTGAGAAGGCAAG+TGG | + | chr3.3:61556770-61556789 | None:intergenic | 35.0% | |
| AATTTCCTTTGTCTTCTGGA+AGG | - | chr3.3:61557562-61557581 | MS.gene008066:intron | 35.0% | |
| AGATTTCAGCTTGCACAAAT+GGG | - | chr3.3:61558353-61558372 | MS.gene008066:CDS | 35.0% | |
| ATATGAGGTGGTTGTTAAGT+TGG | - | chr3.3:61557702-61557721 | MS.gene008066:intron | 35.0% | |
| CAAAATGTGGTCACCAATTT+AGG | + | chr3.3:61558008-61558027 | None:intergenic | 35.0% | |
| CAATATTGGCCATTCTCTTA+AGG | + | chr3.3:61558140-61558159 | None:intergenic | 35.0% | |
| CGTAAATTTGTGTGCAAATG+TGG | - | chr3.3:61556945-61556964 | MS.gene008066:intron | 35.0% | |
| CTTTCACGATAGGAACTAAT+GGG | - | chr3.3:61557434-61557453 | MS.gene008066:intron | 35.0% | |
| GCTGTTTATGTGTTTGGAAA+TGG | - | chr3.3:61556576-61556595 | MS.gene008066:intron | 35.0% | |
| GTATAATACATGGCCATAAG+GGG | - | chr3.3:61557738-61557757 | MS.gene008066:intron | 35.0% | |
| GTTCAAAGAATATGTGCAAG+TGG | - | chr3.3:61557974-61557993 | MS.gene008066:intron | 35.0% | |
| GTTGAATTTCCTTTGTCTTC+TGG | - | chr3.3:61557558-61557577 | MS.gene008066:intron | 35.0% | |
| GTTGTTAAGGAAAGAGAAAC+AGG | + | chr3.3:61556265-61556284 | None:intergenic | 35.0% | |
| TAAATGGTACTTACGATAGG+TGG | + | chr3.3:61557483-61557502 | None:intergenic | 35.0% | |
| TATGAGGTGGTTGTTAAGTT+GGG | - | chr3.3:61557703-61557722 | MS.gene008066:intron | 35.0% | |
| TATGTGTTTGGAAATGGTAG+TGG | - | chr3.3:61556582-61556601 | MS.gene008066:intron | 35.0% | |
| TCAGCAATAACCAATAGAAC+CGG | + | chr3.3:61556205-61556224 | None:intergenic | 35.0% | |
| TGAATACAGCATATATGAGG+TGG | - | chr3.3:61557690-61557709 | MS.gene008066:intron | 35.0% | |
| ! | ACTTTGATGACAATTCCACT+TGG | - | chr3.3:61557595-61557614 | MS.gene008066:intron | 35.0% |
| ! | CTCTCTACAACTTGTTCTAT+AGG | + | chr3.3:61556679-61556698 | None:intergenic | 35.0% |
| ! | GGAATTTTTGTGAGGTAACA+AGG | - | chr3.3:61557455-61557474 | MS.gene008066:intron | 35.0% |
| ! | TAGAGAGAGAAGAAAGCTTT+TGG | - | chr3.3:61556692-61556711 | MS.gene008066:intron | 35.0% |
| ! | TTGCTTAATGACTTGGAGTA+TGG | - | chr3.3:61557408-61557427 | MS.gene008066:intron | 35.0% |
| !! | ATGAGAAGAGAGTGTTGTTA+AGG | + | chr3.3:61556278-61556297 | None:intergenic | 35.0% |
| !! | TGGTTGGTAAATGGATTGAA+GGG | + | chr3.3:61556750-61556769 | None:intergenic | 35.0% |
| AGCAATAACCAATAGAACCG+GGG | + | chr3.3:61556203-61556222 | None:intergenic | 40.0% | |
| ATTGGAGGGTTGAGACTATT+TGG | + | chr3.3:61557830-61557849 | None:intergenic | 40.0% | |
| CAATACCTTCCAGAAGACAA+AGG | + | chr3.3:61557570-61557589 | None:intergenic | 40.0% | |
| CAGATTTCAGCTTGCACAAA+TGG | - | chr3.3:61558352-61558371 | MS.gene008066:CDS | 40.0% | |
| CAGCAATAACCAATAGAACC+GGG | + | chr3.3:61556204-61556223 | None:intergenic | 40.0% | |
| CCAATATTGCCAACGCAATT+GGG | - | chr3.3:61558151-61558170 | MS.gene008066:intron | 40.0% | |
| CTCCAAGTCATTAAGCAAAC+CGG | + | chr3.3:61557406-61557425 | None:intergenic | 40.0% | |
| CTCTCTTCCTGAAGAATCTT+GGG | + | chr3.3:61558391-61558410 | None:intergenic | 40.0% | |
| GCTTTCACGATAGGAACTAA+TGG | - | chr3.3:61557433-61557452 | MS.gene008066:intron | 40.0% | |
| TAACACCATATCTTCGCATG+TGG | + | chr3.3:61558079-61558098 | None:intergenic | 40.0% | |
| TAAGCAAACCGGAAACTACT+TGG | + | chr3.3:61557395-61557414 | None:intergenic | 40.0% | |
| TCTCTCTTCCTGAAGAATCT+TGG | + | chr3.3:61558392-61558411 | None:intergenic | 40.0% | |
| TGAAGAATCTTGGGATACCT+CGG | + | chr3.3:61558382-61558401 | None:intergenic | 40.0% | |
| TGGAATCCAATATCCCCTTA+TGG | + | chr3.3:61557754-61557773 | None:intergenic | 40.0% | |
| TTATGCCACATGCGAAGATA+TGG | - | chr3.3:61558071-61558090 | MS.gene008066:intron | 40.0% | |
| TTTGCTTTCAAGCATCCAAG+TGG | + | chr3.3:61557613-61557632 | None:intergenic | 40.0% | |
| ! | ACTTCTTCTATTTTCTGCCC+CGG | - | chr3.3:61556183-61556202 | MS.gene008066:intron | 40.0% |
| ! | CTTAATGACTTGGAGTATGG+TGG | - | chr3.3:61557411-61557430 | MS.gene008066:intron | 40.0% |
| ! | CTTTGTCTTCTGGAAGGTAT+TGG | - | chr3.3:61557568-61557587 | MS.gene008066:intron | 40.0% |
| ! | TTCCGGTTTGCTTAATGACT+TGG | - | chr3.3:61557401-61557420 | MS.gene008066:intron | 40.0% |
| !! | GTGGTTGGTAAATGGATTGA+AGG | + | chr3.3:61556751-61556770 | None:intergenic | 40.0% |
| ACATGGCCATAAGGGGATAT+TGG | - | chr3.3:61557745-61557764 | MS.gene008066:intron | 45.0% | |
| AGTATGGTGGCTTTCACGAT+AGG | - | chr3.3:61557424-61557443 | MS.gene008066:intron | 45.0% | |
| AGTGGGAACACGTCCTAAAT+TGG | - | chr3.3:61557992-61558011 | MS.gene008066:intron | 45.0% | |
| CCAAGACTTTCACGATCAAG+AGG | - | chr3.3:61556492-61556511 | MS.gene008066:intron | 45.0% | |
| CCTCTTGATCGTGAAAGTCT+TGG | + | chr3.3:61556495-61556514 | None:intergenic | 45.0% | |
| GCCAATATTGCCAACGCAAT+TGG | - | chr3.3:61558150-61558169 | MS.gene008066:intron | 45.0% | |
| GTTTGTGTGTTCTTGTGCGT+TGG | - | chr3.3:61556632-61556651 | MS.gene008066:intron | 45.0% | |
| TATGTGAGAAGGCAAGTGGT+TGG | + | chr3.3:61556766-61556785 | None:intergenic | 45.0% | |
| TGGGTATTCTCCAACTTGCA+GGG | + | chr3.3:61558178-61558197 | None:intergenic | 45.0% | |
| ! | AGTGTTGAGAGAAGAGCTGA+AGG | + | chr3.3:61556238-61556257 | None:intergenic | 45.0% |
| ! | ATTTTCTGCCCCGGTTCTAT+TGG | - | chr3.3:61556192-61556211 | MS.gene008066:intron | 45.0% |
| ! | CCCAATTGCGTTGGCAATAT+TGG | + | chr3.3:61558154-61558173 | None:intergenic | 45.0% |
| ! | GAGGTATCCCAAGATTCTTC+AGG | - | chr3.3:61558381-61558400 | MS.gene008066:CDS | 45.0% |
| !! | AATGGTAGTGGCTATGTTGG+AGG | - | chr3.3:61556594-61556613 | MS.gene008066:intron | 45.0% |
| !! | AGGTGGTTGTTAAGTTGGGT+AGG | - | chr3.3:61557707-61557726 | MS.gene008066:intron | 45.0% |
| !! | GAAGGCAAGTGGTTGGTAAA+TGG | + | chr3.3:61556759-61556778 | None:intergenic | 45.0% |
| !! | GGAAATGGTAGTGGCTATGT+TGG | - | chr3.3:61556591-61556610 | MS.gene008066:intron | 45.0% |
| !! | GGTGGTTGTTAAGTTGGGTA+GGG | - | chr3.3:61557708-61557727 | MS.gene008066:intron | 45.0% |
| CTTGCACAAATGGGTATCCG+AGG | - | chr3.3:61558362-61558381 | MS.gene008066:CDS | 50.0% | |
| GTGGGTATTCTCCAACTTGC+AGG | + | chr3.3:61558179-61558198 | None:intergenic | 50.0% | |
| !! | TGTTCTTGTGCGTTGGCTGT+GGG | - | chr3.3:61556639-61556658 | MS.gene008066:intron | 50.0% |
| GCAATTGGGACCCTGCAAGT+TGG | - | chr3.3:61558165-61558184 | MS.gene008066:intron | 55.0% | |
| TTGCAGGGTCCCAATTGCGT+TGG | + | chr3.3:61558163-61558182 | None:intergenic | 55.0% | |
| !! | GTGTTCTTGTGCGTTGGCTG+TGG | - | chr3.3:61556638-61556657 | MS.gene008066:intron | 55.0% |
| GGCTGTGGGACATGTTGTCG+TGG | - | chr3.3:61556653-61556672 | MS.gene008066:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 61556097 | 61558451 | 61556097 | ID=MS.gene008066 |
| chr3.3 | mRNA | 61556097 | 61558451 | 61556097 | ID=MS.gene008066.t1;Parent=MS.gene008066 |
| chr3.3 | exon | 61558175 | 61558451 | 61558175 | ID=MS.gene008066.t1.exon1;Parent=MS.gene008066.t1 |
| chr3.3 | CDS | 61558175 | 61558451 | 61558175 | ID=cds.MS.gene008066.t1;Parent=MS.gene008066.t1 |
| chr3.3 | exon | 61557811 | 61557946 | 61557811 | ID=MS.gene008066.t1.exon2;Parent=MS.gene008066.t1 |
| chr3.3 | CDS | 61557811 | 61557946 | 61557811 | ID=cds.MS.gene008066.t1;Parent=MS.gene008066.t1 |
| chr3.3 | exon | 61556097 | 61556193 | 61556097 | ID=MS.gene008066.t1.exon3;Parent=MS.gene008066.t1 |
| chr3.3 | CDS | 61556097 | 61556193 | 61556097 | ID=cds.MS.gene008066.t1;Parent=MS.gene008066.t1 |
| Gene Sequence |
| Protein sequence |
