Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69234.t1 | AFK47256.1 | 74.3 | 206 | 7 | 2 | 1 | 160 | 14 | 219 | 6.30E-65 | 256.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69234.t1 | I3T414 | 74.3 | 206 | 7 | 2 | 1 | 160 | 14 | 219 | 4.6e-65 | 256.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052917 | MS.gene69234 | 0.800574 | 1.35E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031986 | MS.gene69234 | PPI |
| MS.gene69234 | MS.gene008066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69234.t1 | MTR_3g070400 | 96.809 | 94 | 3 | 0 | 1 | 94 | 14 | 107 | 3.16e-55 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69234.t1 | AT2G40095 | 53.704 | 108 | 38 | 3 | 1 | 100 | 1 | 104 | 2.81e-25 | 96.7 |
| MS.gene69234.t1 | AT2G40095 | 53.704 | 108 | 38 | 3 | 1 | 100 | 1 | 104 | 2.81e-25 | 96.7 |
| MS.gene69234.t1 | AT2G40095 | 53.704 | 108 | 38 | 3 | 1 | 100 | 1 | 104 | 6.13e-25 | 95.9 |
| MS.gene69234.t1 | AT3G55880 | 49.138 | 116 | 42 | 4 | 1 | 100 | 1 | 115 | 6.60e-18 | 77.4 |
| MS.gene69234.t1 | AT3G55880 | 49.138 | 116 | 42 | 4 | 1 | 100 | 1 | 115 | 6.60e-18 | 77.4 |
| MS.gene69234.t1 | AT3G55880 | 49.138 | 116 | 42 | 4 | 1 | 100 | 1 | 115 | 6.82e-18 | 77.8 |
| MS.gene69234.t1 | AT3G55880 | 49.138 | 116 | 42 | 4 | 1 | 100 | 1 | 115 | 6.82e-18 | 77.8 |
| MS.gene69234.t1 | AT1G52750 | 41.667 | 96 | 48 | 3 | 8 | 100 | 11 | 101 | 4.71e-15 | 72.0 |
| MS.gene69234.t1 | AT1G80280 | 45.238 | 84 | 41 | 2 | 8 | 91 | 9 | 87 | 5.79e-15 | 71.6 |
Find 26 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTCTTGAAGAATCTT+AGG | 0.256779 | 3.2:+64119114 | None:intergenic |
| CAGATTTCAGCTTGCACAAA+TGG | 0.343327 | 3.2:-64119150 | MS.gene69234:CDS |
| GTTGTTAAGGAAAGAGAAAC+AGG | 0.354501 | 3.2:+64121588 | None:intergenic |
| TAGAGAGAGAAGAAAGCTTT+TGG | 0.358985 | 3.2:-64121163 | MS.gene69234:CDS |
| CTCTCTACAACTTGTTCTAT+AGG | 0.360607 | 3.2:+64121179 | None:intergenic |
| ATGAGAAGAGAGTGTTGTTA+AGG | 0.381925 | 3.2:+64121575 | None:intergenic |
| TCAGCAATAACCAATAGAAC+CGG | 0.440120 | 3.2:+64121648 | None:intergenic |
| GTGTTCTTGTGCGTTGGCTG+TGG | 0.460083 | 3.2:-64121217 | MS.gene69234:CDS |
| TTTGGAAATGGAAGCTATGT+TGG | 0.473678 | 3.2:-64121264 | MS.gene69234:intron |
| CTACTTACAGAAAATGATGA+AGG | 0.486815 | 3.2:+64121491 | None:intergenic |
| GTTTGTGTGTTCTTGTGCGT+TGG | 0.489131 | 3.2:-64121223 | MS.gene69234:CDS |
| AGTGTTGAGAGAAGAGCTGA+AGG | 0.503134 | 3.2:+64121615 | None:intergenic |
| AGATTTCAGCTTGCACAAAT+GGG | 0.503541 | 3.2:-64119149 | MS.gene69234:CDS |
| TGTTCTTGTGCGTTGGCTGT+GGG | 0.508786 | 3.2:-64121216 | MS.gene69234:CDS |
| CAGCAATAACCAATAGAACC+GGG | 0.564536 | 3.2:+64121649 | None:intergenic |
| GGAAATGGAAGCTATGTTGG+AGG | 0.579482 | 3.2:-64121261 | MS.gene69234:intron |
| TGAAGAATCTTAGGATACCT+CGG | 0.581840 | 3.2:+64119123 | None:intergenic |
| TGGAAGCTATGTTGGAGGAT+CGG | 0.583381 | 3.2:-64121256 | MS.gene69234:intron |
| GGATCTTATGATTGAAACGA+GGG | 0.584128 | 3.2:+64121512 | None:intergenic |
| ATCTAAAAGAATATTAAGAG+TGG | 0.588910 | 3.2:-64121727 | MS.gene69234:CDS |
| GGCTGTGGGACATGTTGTCG+TGG | 0.612882 | 3.2:-64121202 | MS.gene69234:CDS |
| CTTGCACAAATGGGTATCCG+AGG | 0.640579 | 3.2:-64119140 | MS.gene69234:CDS |
| AAATGATCAGTCACTCACTG+TGG | 0.692270 | 3.2:-64119087 | MS.gene69234:CDS |
| AGCAATAACCAATAGAACCG+GGG | 0.697692 | 3.2:+64121650 | None:intergenic |
| AGGATCTTATGATTGAAACG+AGG | 0.704662 | 3.2:+64121511 | None:intergenic |
| GATCTTATGATTGAAACGAG+GGG | 0.745500 | 3.2:+64121513 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATAGTATCAATTAAA+AGG | + | chr3.2:64120009-64120028 | None:intergenic | 10.0% |
| !!! | ATCTTTTATAATTATTAAGT+GGG | + | chr3.2:64121561-64121580 | None:intergenic | 10.0% |
| !!! | TACTATTTGTTTTTTTTTTT+TGG | - | chr3.2:64119860-64119879 | MS.gene69234:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTGATGT+AGG | - | chr3.2:64119430-64119449 | MS.gene69234:intron | 10.0% |
| !! | AATAAGATATTAAATGACTA+AGG | + | chr3.2:64120245-64120264 | None:intergenic | 15.0% |
| !! | ATAATAATTTACAAACATCT+AGG | - | chr3.2:64121372-64121391 | MS.gene69234:intron | 15.0% |
| !! | CTTTATCAAAATTACAAATT+TGG | + | chr3.2:64121191-64121210 | None:intergenic | 15.0% |
| !! | TACAAATTTGGATTAAAAAT+TGG | + | chr3.2:64121179-64121198 | None:intergenic | 15.0% |
| !! | TATTGATATTAGAACAAAAT+AGG | - | chr3.2:64120865-64120884 | MS.gene69234:intron | 15.0% |
| !! | TTAGTCAAAAATAAACATTA+TGG | - | chr3.2:64120095-64120114 | MS.gene69234:intron | 15.0% |
| !! | TTTAGGTAAACATATAAATA+TGG | + | chr3.2:64121615-64121634 | None:intergenic | 15.0% |
| !!! | AAAATATCAAAAGTATAACA+TGG | + | chr3.2:64121664-64121683 | None:intergenic | 15.0% |
| !!! | GATCTTTTATAATTATTAAG+TGG | + | chr3.2:64121562-64121581 | None:intergenic | 15.0% |
| !!! | TCTTTCAAAAAAAAACATTT+TGG | - | chr3.2:64120066-64120085 | MS.gene69234:intron | 15.0% |
| !! | AAATTTGGATTAAAAATTGG+AGG | + | chr3.2:64121176-64121195 | None:intergenic | 20.0% |
| !! | AATTTGGATTAAAAATTGGA+GGG | + | chr3.2:64121175-64121194 | None:intergenic | 20.0% |
| !! | ATCTAAAAGAATATTAAGAG+TGG | - | chr3.2:64119108-64119127 | MS.gene69234:CDS | 20.0% |
| !! | CAAAGCTGAAAAAATTAAAT+AGG | + | chr3.2:64120977-64120996 | None:intergenic | 20.0% |
| !! | TATTATGTATAGTCAAAATG+TGG | + | chr3.2:64121355-64121374 | None:intergenic | 20.0% |
| !! | TATTATTAATTGTTGCTAGT+GGG | + | chr3.2:64121531-64121550 | None:intergenic | 20.0% |
| !! | TGTTCTAATATCAATAAGAA+AGG | + | chr3.2:64120861-64120880 | None:intergenic | 20.0% |
| !! | TTAAAAAGTGACACTTAAAA+AGG | + | chr3.2:64120148-64120167 | None:intergenic | 20.0% |
| !! | TTTGAAAAATTTATGTGAGA+AGG | + | chr3.2:64119757-64119776 | None:intergenic | 20.0% |
| !!! | AATTTCATCTTTTAGAATGT+AGG | - | chr3.2:64120681-64120700 | MS.gene69234:intron | 20.0% |
| !!! | ATTTTGATAAAATCAAGACT+TGG | - | chr3.2:64121236-64121255 | MS.gene69234:CDS | 20.0% |
| !!! | CATTGATATTTTCAACATTT+TGG | - | chr3.2:64120035-64120054 | MS.gene69234:intron | 20.0% |
| !!! | CTATTTAATTTTTTCAGCTT+TGG | - | chr3.2:64120975-64120994 | MS.gene69234:intron | 20.0% |
| !!! | TAGTCACATTCAATATTTTT+AGG | + | chr3.2:64121632-64121651 | None:intergenic | 20.0% |
| ! | ACTAGTATATGAATATGATG+TGG | + | chr3.2:64121105-64121124 | None:intergenic | 25.0% |
| ! | ATCGTTGTTATACACAAATA+AGG | + | chr3.2:64119502-64119521 | None:intergenic | 25.0% |
| ! | ATTTGGAAGAGTAATTCAAT+GGG | + | chr3.2:64121144-64121163 | None:intergenic | 25.0% |
| ! | CACTAGCAACAATTAATAAT+AGG | - | chr3.2:64121530-64121549 | MS.gene69234:CDS | 25.0% |
| ! | CCTTTAATCAAAATCCAAAA+GGG | + | chr3.2:64119407-64119426 | None:intergenic | 25.0% |
| ! | CTATTATTAATTGTTGCTAG+TGG | + | chr3.2:64121532-64121551 | None:intergenic | 25.0% |
| ! | GGGTATAAATGTATAATACA+TGG | - | chr3.2:64121059-64121078 | MS.gene69234:intron | 25.0% |
| ! | GTAACATTTATTAAGTGTCT+TGG | + | chr3.2:64120184-64120203 | None:intergenic | 25.0% |
| ! | TATTTGGAAGAGTAATTCAA+TGG | + | chr3.2:64121145-64121164 | None:intergenic | 25.0% |
| ! | TTATCCTTAGTTATCTATTG+TGG | + | chr3.2:64120284-64120303 | None:intergenic | 25.0% |
| ! | TTTGAAAGTGACAGTTAAAT+AGG | - | chr3.2:64120338-64120357 | MS.gene69234:intron | 25.0% |
| !! | GAAGTTTCCTTGATTTTAAA+TGG | + | chr3.2:64120830-64120849 | None:intergenic | 25.0% |
| !! | GTAAGTACCATTTAAAATCA+AGG | - | chr3.2:64120820-64120839 | MS.gene69234:intron | 25.0% |
| !! | GTCTTGATTTTATCAAAATC+AGG | + | chr3.2:64121235-64121254 | None:intergenic | 25.0% |
| !! | TTAATTTTCAATGACCCTTT+TGG | - | chr3.2:64119390-64119409 | MS.gene69234:intron | 25.0% |
| !! | TTTAAAGCTGTTTATGTGTT+TGG | - | chr3.2:64119553-64119572 | MS.gene69234:intron | 25.0% |
| !! | TTTTAAATGGTACTTACGAT+AGG | + | chr3.2:64120817-64120836 | None:intergenic | 25.0% |
| !! | TTTTGAATACAGCATATATG+AGG | - | chr3.2:64121018-64121037 | MS.gene69234:intron | 25.0% |
| !!! | CCTTTTGGATTTTGATTAAA+GGG | - | chr3.2:64119405-64119424 | MS.gene69234:intron | 25.0% |
| !!! | TATTTTTTGCCTTAAGAGAA+TGG | - | chr3.2:64121462-64121481 | MS.gene69234:intron | 25.0% |
| AATATGGCATGAAAAGAACA+TGG | + | chr3.2:64121599-64121618 | None:intergenic | 30.0% | |
| ATATGGCATGAAAAGAACAT+GGG | + | chr3.2:64121598-64121617 | None:intergenic | 30.0% | |
| ATGTATAATACATGGCCATA+AGG | - | chr3.2:64121067-64121086 | MS.gene69234:intron | 30.0% | |
| CCCTTTAATCAAAATCCAAA+AGG | + | chr3.2:64119408-64119427 | None:intergenic | 30.0% | |
| CTACTTACAGAAAATGATGA+AGG | + | chr3.2:64119347-64119366 | None:intergenic | 30.0% | |
| GGTGTTTATAGTTTATGTGA+TGG | - | chr3.2:64119451-64119470 | MS.gene69234:intron | 30.0% | |
| TAGTGACACTTAAAAAGGAA+CGG | - | chr3.2:64120379-64120398 | MS.gene69234:intron | 30.0% | |
| TATCAATTAAAAGGTTCACG+CGG | + | chr3.2:64120000-64120019 | None:intergenic | 30.0% | |
| TCCAATAGTGACACTTAAAA+AGG | - | chr3.2:64120374-64120393 | MS.gene69234:intron | 30.0% | |
| TGTATAATACATGGCCATAA+GGG | - | chr3.2:64121068-64121087 | MS.gene69234:intron | 30.0% | |
| ! | AACTAATGGGAATTTTTGTG+AGG | - | chr3.2:64120778-64120797 | MS.gene69234:intron | 30.0% |
| !!! | CCCTTTTGGATTTTGATTAA+AGG | - | chr3.2:64119404-64119423 | MS.gene69234:intron | 30.0% |
| !!! | TCCTTTTTAAGTGTCACTAT+TGG | + | chr3.2:64120378-64120397 | None:intergenic | 30.0% |
| AAATGGTACTTACGATAGGT+GGG | + | chr3.2:64120813-64120832 | None:intergenic | 35.0% | |
| AATTTATGTGAGAAGGCAAG+TGG | + | chr3.2:64119750-64119769 | None:intergenic | 35.0% | |
| AATTTCCTTTGTCTTCTGGA+AGG | - | chr3.2:64120893-64120912 | MS.gene69234:intron | 35.0% | |
| AGATTTCAGCTTGCACAAAT+GGG | - | chr3.2:64121686-64121705 | MS.gene69234:CDS | 35.0% | |
| AGGATCTTATGATTGAAACG+AGG | + | chr3.2:64119327-64119346 | None:intergenic | 35.0% | |
| ATATGAGGTGGTTGTTAAGT+TGG | - | chr3.2:64121033-64121052 | MS.gene69234:intron | 35.0% | |
| CAAAATGTGGTCACCAATTT+AGG | + | chr3.2:64121342-64121361 | None:intergenic | 35.0% | |
| CAATATTGGCCATTCTCTTA+AGG | + | chr3.2:64121474-64121493 | None:intergenic | 35.0% | |
| CGTAAATTTGTGTGCAAATG+TGG | - | chr3.2:64119956-64119975 | MS.gene69234:intron | 35.0% | |
| CTCTCCACAATAGATAACTA+AGG | - | chr3.2:64120277-64120296 | MS.gene69234:intron | 35.0% | |
| CTCTCTTCTTGAAGAATCTT+AGG | + | chr3.2:64121724-64121743 | None:intergenic | 35.0% | |
| GATCTTATGATTGAAACGAG+GGG | + | chr3.2:64119325-64119344 | None:intergenic | 35.0% | |
| GCTGTTTATGTGTTTGGAAA+TGG | - | chr3.2:64119559-64119578 | MS.gene69234:intron | 35.0% | |
| GGATCTTATGATTGAAACGA+GGG | + | chr3.2:64119326-64119345 | None:intergenic | 35.0% | |
| GTATAATACATGGCCATAAG+GGG | - | chr3.2:64121069-64121088 | MS.gene69234:intron | 35.0% | |
| GTTGAATTTCCTTTGTCTTC+TGG | - | chr3.2:64120889-64120908 | MS.gene69234:intron | 35.0% | |
| GTTGTTAAGGAAAGAGAAAC+AGG | + | chr3.2:64119250-64119269 | None:intergenic | 35.0% | |
| TAAATGGTACTTACGATAGG+TGG | + | chr3.2:64120814-64120833 | None:intergenic | 35.0% | |
| TAAGCAAACTGGAAACTACT+TGG | + | chr3.2:64120725-64120744 | None:intergenic | 35.0% | |
| TATGAGGTGGTTGTTAAGTT+GGG | - | chr3.2:64121034-64121053 | MS.gene69234:intron | 35.0% | |
| TCAGCAATAACCAATAGAAC+CGG | + | chr3.2:64119190-64119209 | None:intergenic | 35.0% | |
| TGAAGAATCTTAGGATACCT+CGG | + | chr3.2:64121715-64121734 | None:intergenic | 35.0% | |
| TGAATACAGCATATATGAGG+TGG | - | chr3.2:64121021-64121040 | MS.gene69234:intron | 35.0% | |
| TGACACTTAAAAAGGAACAG+AGG | + | chr3.2:64120140-64120159 | None:intergenic | 35.0% | |
| TTCAACGAATATGTGCAAGT+GGG | - | chr3.2:64121309-64121328 | MS.gene69234:intron | 35.0% | |
| TTTCACGATAGGGAACTAAT+GGG | - | chr3.2:64120765-64120784 | MS.gene69234:intron | 35.0% | |
| TTTGGAAATGGAAGCTATGT+TGG | - | chr3.2:64119571-64119590 | MS.gene69234:intron | 35.0% | |
| ! | ACTTTGATGACAATTCCACT+TGG | - | chr3.2:64120926-64120945 | MS.gene69234:intron | 35.0% |
| ! | CTCTCTACAACTTGTTCTAT+AGG | + | chr3.2:64119659-64119678 | None:intergenic | 35.0% |
| ! | GGAATTTTTGTGAGGTAACA+AGG | - | chr3.2:64120786-64120805 | MS.gene69234:intron | 35.0% |
| ! | TAGAGAGAGAAGAAAGCTTT+TGG | - | chr3.2:64119672-64119691 | MS.gene69234:intron | 35.0% |
| ! | TTCCAGTTTGCTTAATGACT+TGG | - | chr3.2:64120731-64120750 | MS.gene69234:intron | 35.0% |
| ! | TTGCTTAATGACTTGGAGTA+TGG | - | chr3.2:64120738-64120757 | MS.gene69234:intron | 35.0% |
| !! | ATGAGAAGAGAGTGTTGTTA+AGG | + | chr3.2:64119263-64119282 | None:intergenic | 35.0% |
| !! | TGGTTGGTAAATGGATTGAA+GGG | + | chr3.2:64119730-64119749 | None:intergenic | 35.0% |
| AAATGATCAGTCACTCACTG+TGG | - | chr3.2:64121748-64121767 | MS.gene69234:CDS | 40.0% | |
| AGCAATAACCAATAGAACCG+GGG | + | chr3.2:64119188-64119207 | None:intergenic | 40.0% | |
| ATTGGAGGGTTGAGACTATT+TGG | + | chr3.2:64121161-64121180 | None:intergenic | 40.0% | |
| CAATACCTTCCAGAAGACAA+AGG | + | chr3.2:64120901-64120920 | None:intergenic | 40.0% | |
| CAGATTTCAGCTTGCACAAA+TGG | - | chr3.2:64121685-64121704 | MS.gene69234:CDS | 40.0% | |
| CAGCAATAACCAATAGAACC+GGG | + | chr3.2:64119189-64119208 | None:intergenic | 40.0% | |
| CCAATATTGCCAACGCAATT+GGG | - | chr3.2:64121485-64121504 | MS.gene69234:intron | 40.0% | |
| CTCCAAGTCATTAAGCAAAC+TGG | + | chr3.2:64120736-64120755 | None:intergenic | 40.0% | |
| CTTTCACGATAGGGAACTAA+TGG | - | chr3.2:64120764-64120783 | MS.gene69234:intron | 40.0% | |
| GACACTTAAAAAGGAACGGA+GGG | - | chr3.2:64120383-64120402 | MS.gene69234:intron | 40.0% | |
| GTTCAACGAATATGTGCAAG+TGG | - | chr3.2:64121308-64121327 | MS.gene69234:intron | 40.0% | |
| TAACACCATATCTTCGCATG+TGG | + | chr3.2:64121413-64121432 | None:intergenic | 40.0% | |
| TGACACTTAAAAAGGAACGG+AGG | - | chr3.2:64120382-64120401 | MS.gene69234:intron | 40.0% | |
| TGGAATCCAATATCCCCTTA+TGG | + | chr3.2:64121085-64121104 | None:intergenic | 40.0% | |
| TTATGCCACATGCGAAGATA+TGG | - | chr3.2:64121405-64121424 | MS.gene69234:intron | 40.0% | |
| TTTGCTTTCAAGCATCCAAG+TGG | + | chr3.2:64120944-64120963 | None:intergenic | 40.0% | |
| ! | ACTTCTTCTATTTTCTGCCC+CGG | - | chr3.2:64119168-64119187 | MS.gene69234:intron | 40.0% |
| ! | CTTAATGACTTGGAGTATGG+TGG | - | chr3.2:64120741-64120760 | MS.gene69234:intron | 40.0% |
| ! | CTTTGTCTTCTGGAAGGTAT+TGG | - | chr3.2:64120899-64120918 | MS.gene69234:intron | 40.0% |
| !! | GTGGTTGGTAAATGGATTGA+AGG | + | chr3.2:64119731-64119750 | None:intergenic | 40.0% |
| ACATGGCCATAAGGGGATAT+TGG | - | chr3.2:64121076-64121095 | MS.gene69234:intron | 45.0% | |
| AGTATGGTGGCTTTCACGAT+AGG | - | chr3.2:64120754-64120773 | MS.gene69234:intron | 45.0% | |
| AGTGGGAACACGTCCTAAAT+TGG | - | chr3.2:64121326-64121345 | MS.gene69234:intron | 45.0% | |
| CCAAGACTTTCACGATCAAG+AGG | - | chr3.2:64119475-64119494 | MS.gene69234:intron | 45.0% | |
| CCTCTTGATCGTGAAAGTCT+TGG | + | chr3.2:64119478-64119497 | None:intergenic | 45.0% | |
| GCCAATATTGCCAACGCAAT+TGG | - | chr3.2:64121484-64121503 | MS.gene69234:intron | 45.0% | |
| GGAAATGGAAGCTATGTTGG+AGG | - | chr3.2:64119574-64119593 | MS.gene69234:intron | 45.0% | |
| GTATGGTGGCTTTCACGATA+GGG | - | chr3.2:64120755-64120774 | MS.gene69234:intron | 45.0% | |
| GTTTGTGTGTTCTTGTGCGT+TGG | - | chr3.2:64119612-64119631 | MS.gene69234:intron | 45.0% | |
| TATGTGAGAAGGCAAGTGGT+TGG | + | chr3.2:64119746-64119765 | None:intergenic | 45.0% | |
| TGGAAGCTATGTTGGAGGAT+CGG | - | chr3.2:64119579-64119598 | MS.gene69234:intron | 45.0% | |
| TGGGTATTCTCCAACTTGCA+GGG | + | chr3.2:64121512-64121531 | None:intergenic | 45.0% | |
| ! | AGTGTTGAGAGAAGAGCTGA+AGG | + | chr3.2:64119223-64119242 | None:intergenic | 45.0% |
| ! | ATTTTCTGCCCCGGTTCTAT+TGG | - | chr3.2:64119177-64119196 | MS.gene69234:intron | 45.0% |
| ! | CCCAATTGCGTTGGCAATAT+TGG | + | chr3.2:64121488-64121507 | None:intergenic | 45.0% |
| !! | AGGTGGTTGTTAAGTTGGGT+AGG | - | chr3.2:64121038-64121057 | MS.gene69234:intron | 45.0% |
| !! | GAAGGCAAGTGGTTGGTAAA+TGG | + | chr3.2:64119739-64119758 | None:intergenic | 45.0% |
| !! | GGTGGTTGTTAAGTTGGGTA+GGG | - | chr3.2:64121039-64121058 | MS.gene69234:intron | 45.0% |
| CTTGCACAAATGGGTATCCG+AGG | - | chr3.2:64121695-64121714 | MS.gene69234:CDS | 50.0% | |
| GTGGGTATTCTCCAACTTGC+AGG | + | chr3.2:64121513-64121532 | None:intergenic | 50.0% | |
| !! | TGTTCTTGTGCGTTGGCTGT+GGG | - | chr3.2:64119619-64119638 | MS.gene69234:intron | 50.0% |
| GCAATTGGGACCCTGCAAGT+TGG | - | chr3.2:64121499-64121518 | MS.gene69234:CDS | 55.0% | |
| TTGCAGGGTCCCAATTGCGT+TGG | + | chr3.2:64121497-64121516 | None:intergenic | 55.0% | |
| !! | GTGTTCTTGTGCGTTGGCTG+TGG | - | chr3.2:64119618-64119637 | MS.gene69234:intron | 55.0% |
| GGCTGTGGGACATGTTGTCG+TGG | - | chr3.2:64119633-64119652 | MS.gene69234:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 64119082 | 64121775 | 64119082 | ID=MS.gene69234 |
| chr3.2 | mRNA | 64119082 | 64121775 | 64119082 | ID=MS.gene69234.t1;Parent=MS.gene69234 |
| chr3.2 | exon | 64121499 | 64121775 | 64121499 | ID=MS.gene69234.t1.exon1;Parent=MS.gene69234.t1 |
| chr3.2 | CDS | 64121499 | 64121775 | 64121499 | ID=cds.MS.gene69234.t1;Parent=MS.gene69234.t1 |
| chr3.2 | exon | 64121140 | 64121272 | 64121140 | ID=MS.gene69234.t1.exon2;Parent=MS.gene69234.t1 |
| chr3.2 | CDS | 64121140 | 64121272 | 64121140 | ID=cds.MS.gene69234.t1;Parent=MS.gene69234.t1 |
| chr3.2 | exon | 64119082 | 64119169 | 64119082 | ID=MS.gene69234.t1.exon3;Parent=MS.gene69234.t1 |
| chr3.2 | CDS | 64119082 | 64119169 | 64119082 | ID=cds.MS.gene69234.t1;Parent=MS.gene69234.t1 |
| Gene Sequence |
| Protein sequence |
