Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031986.t1 | AFK47256.1 | 73.3 | 206 | 10 | 2 | 1 | 161 | 14 | 219 | 1.20E-63 | 252.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031986.t1 | I3T414 | 73.3 | 206 | 10 | 2 | 1 | 161 | 14 | 219 | 8.8e-64 | 252.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031986 | MS.gene69234 | PPI |
| MS.gene031986 | MS.gene008066 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031986.t1 | MTR_3g070400 | 98.913 | 92 | 1 | 0 | 1 | 92 | 14 | 105 | 3.91e-55 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031986.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 3.75e-25 | 96.7 |
| MS.gene031986.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 3.75e-25 | 96.7 |
| MS.gene031986.t1 | AT2G40095 | 58.333 | 96 | 31 | 2 | 1 | 91 | 1 | 92 | 9.47e-25 | 95.5 |
| MS.gene031986.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.61e-18 | 77.0 |
| MS.gene031986.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.61e-18 | 77.0 |
| MS.gene031986.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.81e-18 | 77.4 |
| MS.gene031986.t1 | AT3G55880 | 52.885 | 104 | 35 | 3 | 1 | 91 | 1 | 103 | 9.81e-18 | 77.4 |
| MS.gene031986.t1 | AT1G80280 | 45.238 | 84 | 41 | 2 | 8 | 91 | 9 | 87 | 6.85e-16 | 74.7 |
| MS.gene031986.t1 | AT1G52750 | 41.667 | 96 | 49 | 3 | 8 | 101 | 11 | 101 | 7.26e-15 | 71.6 |
Find 28 sgRNAs with CRISPR-Local
Find 129 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGATCAGTCACTCACTA+TGG | 0.333726 | 3.4:-70064711 | MS.gene031986:CDS |
| TCTCTCTTCCTGAAGAATCT+TGG | 0.338218 | 3.4:+70064737 | None:intergenic |
| CAGATTTCAGCTTGCACAAA+TGG | 0.343327 | 3.4:-70064774 | MS.gene031986:CDS |
| GTTGTTAAGGAAAGAGAAAC+AGG | 0.354501 | 3.4:+70066864 | None:intergenic |
| TAGAGAGAGAAGAAAGCTTT+TGG | 0.358985 | 3.4:-70066434 | MS.gene031986:CDS |
| CTCTCTACAACTTGTTCTAT+AGG | 0.360607 | 3.4:+70066450 | None:intergenic |
| CTCTCTTCCTGAAGAATCTT+GGG | 0.375477 | 3.4:+70064738 | None:intergenic |
| ATGAGAAGAGAGTGTTGTTA+AGG | 0.381925 | 3.4:+70066851 | None:intergenic |
| GAGGTATCCCAAGATTCTTC+AGG | 0.427863 | 3.4:-70064745 | MS.gene031986:CDS |
| TCAGCAATAACCAATAGAAC+CGG | 0.440120 | 3.4:+70066924 | None:intergenic |
| GTGTTCTTGTGCGTTGGCTG+TGG | 0.460083 | 3.4:-70066488 | MS.gene031986:CDS |
| CTACTTACAGAAAATGATGA+AGG | 0.486815 | 3.4:+70066767 | None:intergenic |
| GTTTGTGTGTTCTTGTGCGT+TGG | 0.489131 | 3.4:-70066494 | MS.gene031986:CDS |
| AGTGTTGAGAGAAGAGCTGA+AGG | 0.489499 | 3.4:+70066891 | None:intergenic |
| GGAAATGGTAGTGGCTATGT+TGG | 0.502642 | 3.4:-70066535 | MS.gene031986:intron |
| AGATTTCAGCTTGCACAAAT+GGG | 0.503541 | 3.4:-70064773 | MS.gene031986:CDS |
| TGTTCTTGTGCGTTGGCTGT+GGG | 0.508786 | 3.4:-70066487 | MS.gene031986:CDS |
| AATGATCAGTCACTCACTAT+GGG | 0.560782 | 3.4:-70064710 | MS.gene031986:CDS |
| CAGCAATAACCAATAGAACC+GGG | 0.564536 | 3.4:+70066925 | None:intergenic |
| ATCTAAAAGAATATTAAGAG+TGG | 0.588910 | 3.4:-70067003 | MS.gene031986:CDS |
| TGAAGAATCTTGGGATACCT+CGG | 0.600326 | 3.4:+70064747 | None:intergenic |
| GGATCTTATTATTGAAACGA+GGG | 0.601692 | 3.4:+70066788 | None:intergenic |
| GGCTGTGGGACATGTTGTCG+TGG | 0.612882 | 3.4:-70066473 | MS.gene031986:CDS |
| AATGGTAGTGGCTATGTTGG+AGG | 0.637532 | 3.4:-70066532 | MS.gene031986:intron |
| CTTGCACAAATGGGTATCCG+AGG | 0.640579 | 3.4:-70064764 | MS.gene031986:CDS |
| GATCTTATTATTGAAACGAG+GGG | 0.673020 | 3.4:+70066789 | None:intergenic |
| AGGATCTTATTATTGAAACG+AGG | 0.676792 | 3.4:+70066787 | None:intergenic |
| AGCAATAACCAATAGAACCG+GGG | 0.697692 | 3.4:+70066926 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATAGTATCAATTAAA+AGG | + | chr3.4:70065591-70065610 | None:intergenic | 10.0% |
| !!! | ATCTTTTTATAATTATTAAG+TGG | + | chr3.4:70066828-70066847 | None:intergenic | 10.0% |
| !!! | TCTTTTTATAATTATTAAGT+GGG | + | chr3.4:70066827-70066846 | None:intergenic | 10.0% |
| !! | ATAATAATTTACAAACATCT+AGG | - | chr3.4:70066638-70066657 | MS.gene031986:intron | 15.0% |
| !! | CTTTATCAAAATTACAAATT+TGG | + | chr3.4:70066460-70066479 | None:intergenic | 15.0% |
| !! | TACAAATTTGGATTAAAAAT+TGG | + | chr3.4:70066448-70066467 | None:intergenic | 15.0% |
| !! | TATTGATATTAGAACAAAAT+AGG | - | chr3.4:70066134-70066153 | MS.gene031986:intron | 15.0% |
| !! | TTAGTCAAAAATAAACATTA+TGG | - | chr3.4:70065646-70065665 | MS.gene031986:intron | 15.0% |
| !! | TTTAGGTAAACATATAAATA+TGG | + | chr3.4:70066882-70066901 | None:intergenic | 15.0% |
| !!! | AAAATATCAAAAGTATAACA+TGG | + | chr3.4:70066931-70066950 | None:intergenic | 15.0% |
| !!! | TTTTATTTCATTTTTGATGT+AGG | - | chr3.4:70065047-70065066 | MS.gene031986:intron | 15.0% |
| !! | AAATTTGGATTAAAAATTGG+AGG | + | chr3.4:70066445-70066464 | None:intergenic | 20.0% |
| !! | AATTTGGATTAAAAATTGGA+GGG | + | chr3.4:70066444-70066463 | None:intergenic | 20.0% |
| !! | ATCTAAAAGAATATTAAGAG+TGG | - | chr3.4:70064723-70064742 | MS.gene031986:CDS | 20.0% |
| !! | CAAAGCTGAAAAAATTAAAT+AGG | + | chr3.4:70066246-70066265 | None:intergenic | 20.0% |
| !! | CCTTTAATTAAAATCCAAAA+GGG | + | chr3.4:70065022-70065041 | None:intergenic | 20.0% |
| !! | TATTATGTATAGTCAAAATG+TGG | + | chr3.4:70066621-70066640 | None:intergenic | 20.0% |
| !! | TATTATTAATTGTTGCTAGT+GGG | + | chr3.4:70066797-70066816 | None:intergenic | 20.0% |
| !! | TGTTCTAATATCAATAAGAA+AGG | + | chr3.4:70066130-70066149 | None:intergenic | 20.0% |
| !! | TTTGAAAAATTTATGTGAGA+AGG | + | chr3.4:70065377-70065396 | None:intergenic | 20.0% |
| !!! | AATTTCATCTTTTAGAATGT+AGG | - | chr3.4:70065951-70065970 | MS.gene031986:intron | 20.0% |
| !!! | ATTTTGATAAAATCAAGACT+TGG | - | chr3.4:70066505-70066524 | MS.gene031986:CDS | 20.0% |
| !!! | CATTGATATTTTCAACATTT+TGG | - | chr3.4:70065617-70065636 | MS.gene031986:intron | 20.0% |
| !!! | CCTTTTGGATTTTAATTAAA+GGG | - | chr3.4:70065020-70065039 | MS.gene031986:intron | 20.0% |
| !!! | CTATTTAATTTTTTCAGCTT+TGG | - | chr3.4:70066244-70066263 | MS.gene031986:intron | 20.0% |
| !!! | TAGTCACATTCAATATTTTT+AGG | + | chr3.4:70066899-70066918 | None:intergenic | 20.0% |
| ! | ACTAGTATATGAATATGATG+TGG | + | chr3.4:70066374-70066393 | None:intergenic | 25.0% |
| ! | ATCGTTGTTATACACAAATA+AGG | + | chr3.4:70065119-70065138 | None:intergenic | 25.0% |
| ! | ATTTGGAAGAGTAATTCAAT+GGG | + | chr3.4:70066413-70066432 | None:intergenic | 25.0% |
| ! | CACTAGCAACAATTAATAAT+AGG | - | chr3.4:70066796-70066815 | MS.gene031986:CDS | 25.0% |
| ! | CCCTTTAATTAAAATCCAAA+AGG | + | chr3.4:70065023-70065042 | None:intergenic | 25.0% |
| ! | CTATTATTAATTGTTGCTAG+TGG | + | chr3.4:70066798-70066817 | None:intergenic | 25.0% |
| ! | GGGTATAAATGTATAATACA+TGG | - | chr3.4:70066328-70066347 | MS.gene031986:intron | 25.0% |
| ! | TATTTGGAAGAGTAATTCAA+TGG | + | chr3.4:70066414-70066433 | None:intergenic | 25.0% |
| !! | GAAGTTTCCTTGATTTTAAA+TGG | + | chr3.4:70066099-70066118 | None:intergenic | 25.0% |
| !! | GTAAGTACCATTTAAAATCA+AGG | - | chr3.4:70066089-70066108 | MS.gene031986:intron | 25.0% |
| !! | GTCTTGATTTTATCAAAATC+AGG | + | chr3.4:70066504-70066523 | None:intergenic | 25.0% |
| !! | TTAATTTTCAATGACCCTTT+TGG | - | chr3.4:70065005-70065024 | MS.gene031986:intron | 25.0% |
| !! | TTTAAAGCTGTTTATGTGTT+TGG | - | chr3.4:70065170-70065189 | MS.gene031986:intron | 25.0% |
| !! | TTTTAAATGGTACTTACGAT+AGG | + | chr3.4:70066086-70066105 | None:intergenic | 25.0% |
| !! | TTTTGAATACAGCATATATG+AGG | - | chr3.4:70066287-70066306 | MS.gene031986:intron | 25.0% |
| !!! | CCCTTTTGGATTTTAATTAA+AGG | - | chr3.4:70065019-70065038 | MS.gene031986:intron | 25.0% |
| !!! | TATTTTTTGCCTTAAGAGAA+TGG | - | chr3.4:70066728-70066747 | MS.gene031986:intron | 25.0% |
| AATATGGCATGAAAAGAACA+TGG | + | chr3.4:70066866-70066885 | None:intergenic | 30.0% | |
| AGGATCTTATTATTGAAACG+AGG | + | chr3.4:70064942-70064961 | None:intergenic | 30.0% | |
| ATATGGCATGAAAAGAACAT+GGG | + | chr3.4:70066865-70066884 | None:intergenic | 30.0% | |
| ATGTATAATACATGGCCATA+AGG | - | chr3.4:70066336-70066355 | MS.gene031986:intron | 30.0% | |
| CTACTTACAGAAAATGATGA+AGG | + | chr3.4:70064962-70064981 | None:intergenic | 30.0% | |
| GATCTTATTATTGAAACGAG+GGG | + | chr3.4:70064940-70064959 | None:intergenic | 30.0% | |
| GGATCTTATTATTGAAACGA+GGG | + | chr3.4:70064941-70064960 | None:intergenic | 30.0% | |
| GGTGTTTATAGTTTATGTGA+TGG | - | chr3.4:70065068-70065087 | MS.gene031986:intron | 30.0% | |
| TATCAATTAAAAGGTTCACG+CGG | + | chr3.4:70065582-70065601 | None:intergenic | 30.0% | |
| TGTATAATACATGGCCATAA+GGG | - | chr3.4:70066337-70066356 | MS.gene031986:intron | 30.0% | |
| TTCAAAGAATATGTGCAAGT+GGG | - | chr3.4:70066575-70066594 | MS.gene031986:intron | 30.0% | |
| ! | AACTAATGGGAATTTTTGTG+AGG | - | chr3.4:70066047-70066066 | MS.gene031986:intron | 30.0% |
| AAATGATCAGTCACTCACTA+TGG | - | chr3.4:70067015-70067034 | MS.gene031986:CDS | 35.0% | |
| AAATGGTACTTACGATAGGT+GGG | + | chr3.4:70066082-70066101 | None:intergenic | 35.0% | |
| AATGATCAGTCACTCACTAT+GGG | - | chr3.4:70067016-70067035 | MS.gene031986:CDS | 35.0% | |
| AATTTATGTGAGAAGGCAAG+TGG | + | chr3.4:70065370-70065389 | None:intergenic | 35.0% | |
| AATTTCCTTTGTCTTCTGGA+AGG | - | chr3.4:70066162-70066181 | MS.gene031986:intron | 35.0% | |
| AGATTTCAGCTTGCACAAAT+GGG | - | chr3.4:70066953-70066972 | MS.gene031986:CDS | 35.0% | |
| ATATGAGGTGGTTGTTAAGT+TGG | - | chr3.4:70066302-70066321 | MS.gene031986:intron | 35.0% | |
| CAAAATGTGGTCACCAATTT+AGG | + | chr3.4:70066608-70066627 | None:intergenic | 35.0% | |
| CAATATTGGCCATTCTCTTA+AGG | + | chr3.4:70066740-70066759 | None:intergenic | 35.0% | |
| CGTAAATTTGTGTGCAAATG+TGG | - | chr3.4:70065545-70065564 | MS.gene031986:intron | 35.0% | |
| CTTTCACGATAGGAACTAAT+GGG | - | chr3.4:70066034-70066053 | MS.gene031986:intron | 35.0% | |
| GCTGTTTATGTGTTTGGAAA+TGG | - | chr3.4:70065176-70065195 | MS.gene031986:intron | 35.0% | |
| GTATAATACATGGCCATAAG+GGG | - | chr3.4:70066338-70066357 | MS.gene031986:intron | 35.0% | |
| GTTCAAAGAATATGTGCAAG+TGG | - | chr3.4:70066574-70066593 | MS.gene031986:intron | 35.0% | |
| GTTGAATTTCCTTTGTCTTC+TGG | - | chr3.4:70066158-70066177 | MS.gene031986:intron | 35.0% | |
| GTTGTTAAGGAAAGAGAAAC+AGG | + | chr3.4:70064865-70064884 | None:intergenic | 35.0% | |
| TAAATGGTACTTACGATAGG+TGG | + | chr3.4:70066083-70066102 | None:intergenic | 35.0% | |
| TAAGCAAACTGGAAACTACT+TGG | + | chr3.4:70065995-70066014 | None:intergenic | 35.0% | |
| TATGAGGTGGTTGTTAAGTT+GGG | - | chr3.4:70066303-70066322 | MS.gene031986:intron | 35.0% | |
| TATGTGTTTGGAAATGGTAG+TGG | - | chr3.4:70065182-70065201 | MS.gene031986:intron | 35.0% | |
| TCAGCAATAACCAATAGAAC+CGG | + | chr3.4:70064805-70064824 | None:intergenic | 35.0% | |
| TGAATACAGCATATATGAGG+TGG | - | chr3.4:70066290-70066309 | MS.gene031986:intron | 35.0% | |
| ! | ACTTTGATGACAATTCCACT+TGG | - | chr3.4:70066195-70066214 | MS.gene031986:intron | 35.0% |
| ! | CTCTCTACAACTTGTTCTAT+AGG | + | chr3.4:70065279-70065298 | None:intergenic | 35.0% |
| ! | GGAATTTTTGTGAGGTAACA+AGG | - | chr3.4:70066055-70066074 | MS.gene031986:intron | 35.0% |
| ! | TAGAGAGAGAAGAAAGCTTT+TGG | - | chr3.4:70065292-70065311 | MS.gene031986:intron | 35.0% |
| ! | TTCCAGTTTGCTTAATGACT+TGG | - | chr3.4:70066001-70066020 | MS.gene031986:intron | 35.0% |
| ! | TTGCTTAATGACTTGGAGTA+TGG | - | chr3.4:70066008-70066027 | MS.gene031986:intron | 35.0% |
| ! | TTTGATTTCAAGCATCCAAG+TGG | + | chr3.4:70066213-70066232 | None:intergenic | 35.0% |
| !! | ATGAGAAGAGAGTGTTGTTA+AGG | + | chr3.4:70064878-70064897 | None:intergenic | 35.0% |
| !! | TGGTTGGTAAATGGATTGAA+GGG | + | chr3.4:70065350-70065369 | None:intergenic | 35.0% |
| AGCAATAACCAATAGAACCG+GGG | + | chr3.4:70064803-70064822 | None:intergenic | 40.0% | |
| ATTGGAGGGTTGAGACTATT+TGG | + | chr3.4:70066430-70066449 | None:intergenic | 40.0% | |
| CAATACCTTCCAGAAGACAA+AGG | + | chr3.4:70066170-70066189 | None:intergenic | 40.0% | |
| CAGATTTCAGCTTGCACAAA+TGG | - | chr3.4:70066952-70066971 | MS.gene031986:CDS | 40.0% | |
| CAGCAATAACCAATAGAACC+GGG | + | chr3.4:70064804-70064823 | None:intergenic | 40.0% | |
| CCAATATTGCCAACGCAATT+GGG | - | chr3.4:70066751-70066770 | MS.gene031986:intron | 40.0% | |
| CTCCAAGTCATTAAGCAAAC+TGG | + | chr3.4:70066006-70066025 | None:intergenic | 40.0% | |
| CTCTCTTCCTGAAGAATCTT+GGG | + | chr3.4:70066991-70067010 | None:intergenic | 40.0% | |
| GCTTTCACGATAGGAACTAA+TGG | - | chr3.4:70066033-70066052 | MS.gene031986:intron | 40.0% | |
| TAACACCATATCTTCGCATG+TGG | + | chr3.4:70066679-70066698 | None:intergenic | 40.0% | |
| TCTCTCTTCCTGAAGAATCT+TGG | + | chr3.4:70066992-70067011 | None:intergenic | 40.0% | |
| TGAAGAATCTTGGGATACCT+CGG | + | chr3.4:70066982-70067001 | None:intergenic | 40.0% | |
| TGGAATCCAATATCCCCTTA+TGG | + | chr3.4:70066354-70066373 | None:intergenic | 40.0% | |
| TTATGCCACATGCGAAGATA+TGG | - | chr3.4:70066671-70066690 | MS.gene031986:intron | 40.0% | |
| ! | ACTTCTTCTATTTTCTGCCC+CGG | - | chr3.4:70064783-70064802 | MS.gene031986:intron | 40.0% |
| ! | CTTAATGACTTGGAGTATGG+TGG | - | chr3.4:70066011-70066030 | MS.gene031986:intron | 40.0% |
| ! | CTTTGTCTTCTGGAAGGTAT+TGG | - | chr3.4:70066168-70066187 | MS.gene031986:intron | 40.0% |
| !! | GTGGTTGGTAAATGGATTGA+AGG | + | chr3.4:70065351-70065370 | None:intergenic | 40.0% |
| ACATGGCCATAAGGGGATAT+TGG | - | chr3.4:70066345-70066364 | MS.gene031986:intron | 45.0% | |
| AGTATGGTGGCTTTCACGAT+AGG | - | chr3.4:70066024-70066043 | MS.gene031986:intron | 45.0% | |
| AGTGGGAACACGTCCTAAAT+TGG | - | chr3.4:70066592-70066611 | MS.gene031986:intron | 45.0% | |
| CCAAGACTTTCACGATCAAG+AGG | - | chr3.4:70065092-70065111 | MS.gene031986:intron | 45.0% | |
| CCTCTTGATCGTGAAAGTCT+TGG | + | chr3.4:70065095-70065114 | None:intergenic | 45.0% | |
| GCCAATATTGCCAACGCAAT+TGG | - | chr3.4:70066750-70066769 | MS.gene031986:intron | 45.0% | |
| GTTTGTGTGTTCTTGTGCGT+TGG | - | chr3.4:70065232-70065251 | MS.gene031986:intron | 45.0% | |
| TATGTGAGAAGGCAAGTGGT+TGG | + | chr3.4:70065366-70065385 | None:intergenic | 45.0% | |
| TGGGTATTCTCCAACTTGCA+GGG | + | chr3.4:70066778-70066797 | None:intergenic | 45.0% | |
| ! | AGTGTTGAGAGAAGAGCTGA+AGG | + | chr3.4:70064838-70064857 | None:intergenic | 45.0% |
| ! | ATTTTCTGCCCCGGTTCTAT+TGG | - | chr3.4:70064792-70064811 | MS.gene031986:intron | 45.0% |
| ! | CCCAATTGCGTTGGCAATAT+TGG | + | chr3.4:70066754-70066773 | None:intergenic | 45.0% |
| ! | GAGGTATCCCAAGATTCTTC+AGG | - | chr3.4:70066981-70067000 | MS.gene031986:CDS | 45.0% |
| !! | AATGGTAGTGGCTATGTTGG+AGG | - | chr3.4:70065194-70065213 | MS.gene031986:intron | 45.0% |
| !! | AGGTGGTTGTTAAGTTGGGT+AGG | - | chr3.4:70066307-70066326 | MS.gene031986:intron | 45.0% |
| !! | GAAGGCAAGTGGTTGGTAAA+TGG | + | chr3.4:70065359-70065378 | None:intergenic | 45.0% |
| !! | GGAAATGGTAGTGGCTATGT+TGG | - | chr3.4:70065191-70065210 | MS.gene031986:intron | 45.0% |
| !! | GGTGGTTGTTAAGTTGGGTA+GGG | - | chr3.4:70066308-70066327 | MS.gene031986:intron | 45.0% |
| CTTGCACAAATGGGTATCCG+AGG | - | chr3.4:70066962-70066981 | MS.gene031986:CDS | 50.0% | |
| GTGGGTATTCTCCAACTTGC+AGG | + | chr3.4:70066779-70066798 | None:intergenic | 50.0% | |
| !! | TGTTCTTGTGCGTTGGCTGT+GGG | - | chr3.4:70065239-70065258 | MS.gene031986:intron | 50.0% |
| GCAATTGGGACCCTGCAAGT+TGG | - | chr3.4:70066765-70066784 | MS.gene031986:intron | 55.0% | |
| TTGCAGGGTCCCAATTGCGT+TGG | + | chr3.4:70066763-70066782 | None:intergenic | 55.0% | |
| !! | GTGTTCTTGTGCGTTGGCTG+TGG | - | chr3.4:70065238-70065257 | MS.gene031986:intron | 55.0% |
| GGCTGTGGGACATGTTGTCG+TGG | - | chr3.4:70065253-70065272 | MS.gene031986:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 70064697 | 70067051 | 70064697 | ID=MS.gene031986 |
| chr3.4 | mRNA | 70064697 | 70067051 | 70064697 | ID=MS.gene031986.t1;Parent=MS.gene031986 |
| chr3.4 | exon | 70066775 | 70067051 | 70066775 | ID=MS.gene031986.t1.exon1;Parent=MS.gene031986.t1 |
| chr3.4 | CDS | 70066775 | 70067051 | 70066775 | ID=cds.MS.gene031986.t1;Parent=MS.gene031986.t1 |
| chr3.4 | exon | 70066411 | 70066546 | 70066411 | ID=MS.gene031986.t1.exon2;Parent=MS.gene031986.t1 |
| chr3.4 | CDS | 70066411 | 70066546 | 70066411 | ID=cds.MS.gene031986.t1;Parent=MS.gene031986.t1 |
| chr3.4 | exon | 70064697 | 70064793 | 70064697 | ID=MS.gene031986.t1.exon3;Parent=MS.gene031986.t1 |
| chr3.4 | CDS | 70064697 | 70064793 | 70064697 | ID=cds.MS.gene031986.t1;Parent=MS.gene031986.t1 |
| Gene Sequence |
| Protein sequence |
