Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008126.t1 | XP_003600780.1 | 97.6 | 574 | 12 | 1 | 1 | 574 | 1 | 572 | 0.00E+00 | 1129 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008126.t1 | Q39033 | 67.6 | 580 | 165 | 7 | 6 | 574 | 14 | 581 | 8.3e-230 | 797.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008126.t1 | G7JA07 | 97.6 | 574 | 12 | 1 | 1 | 574 | 1 | 572 | 0.0e+00 | 1129.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008055 | MS.gene008126 | PPI |
| MS.gene008126 | MS.gene057347 | PPI |
| MS.gene008126 | MS.gene69296 | PPI |
| MS.gene008126 | MS.gene62159 | PPI |
| MS.gene008126 | MS.gene031403 | PPI |
| MS.gene008126 | MS.gene059849 | PPI |
| MS.gene068784 | MS.gene008126 | PPI |
| MS.gene008126 | MS.gene065186 | PPI |
| MS.gene008126 | MS.gene69222 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008126.t1 | MTR_3g069280 | 97.561 | 574 | 12 | 1 | 1 | 574 | 1 | 572 | 0.0 | 1156 |
| MS.gene008126.t1 | MTR_3g070720 | 91.597 | 595 | 27 | 3 | 1 | 574 | 1 | 593 | 0.0 | 1015 |
| MS.gene008126.t1 | MTR_5g082620 | 74.177 | 577 | 138 | 5 | 6 | 573 | 14 | 588 | 0.0 | 884 |
| MS.gene008126.t1 | MTR_3g070720 | 91.383 | 499 | 20 | 3 | 1 | 478 | 1 | 497 | 0.0 | 826 |
| MS.gene008126.t1 | MTR_3g070720 | 91.064 | 470 | 19 | 3 | 1 | 449 | 1 | 468 | 0.0 | 763 |
| MS.gene008126.t1 | MTR_5g071010 | 61.395 | 588 | 203 | 7 | 6 | 574 | 12 | 594 | 0.0 | 730 |
| MS.gene008126.t1 | MTR_5g082590 | 58.714 | 591 | 211 | 8 | 2 | 573 | 5 | 581 | 0.0 | 687 |
| MS.gene008126.t1 | MTR_3g070720 | 90.431 | 418 | 17 | 3 | 1 | 397 | 1 | 416 | 0.0 | 656 |
| MS.gene008126.t1 | MTR_5g082580 | 49.667 | 600 | 258 | 8 | 6 | 573 | 19 | 606 | 0.0 | 580 |
| MS.gene008126.t1 | MTR_3g070710 | 50.171 | 584 | 263 | 8 | 6 | 573 | 15 | 586 | 0.0 | 569 |
| MS.gene008126.t1 | MTR_3g070560 | 50.342 | 584 | 262 | 8 | 7 | 573 | 15 | 587 | 0.0 | 564 |
| MS.gene008126.t1 | MTR_5g071040 | 50.611 | 573 | 236 | 10 | 13 | 573 | 35 | 572 | 0.0 | 542 |
| MS.gene008126.t1 | MTR_3g070560 | 54.048 | 420 | 185 | 4 | 154 | 573 | 3 | 414 | 2.62e-156 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008126.t1 | AT3G08510 | 68.158 | 581 | 168 | 6 | 2 | 574 | 10 | 581 | 0.0 | 819 |
| MS.gene008126.t1 | AT3G08510 | 68.158 | 581 | 168 | 6 | 2 | 574 | 10 | 581 | 0.0 | 819 |
| MS.gene008126.t1 | AT3G55940 | 66.038 | 583 | 178 | 8 | 2 | 574 | 12 | 584 | 0.0 | 768 |
| MS.gene008126.t1 | AT3G08510 | 64.200 | 581 | 162 | 7 | 2 | 574 | 10 | 552 | 0.0 | 747 |
| MS.gene008126.t1 | AT3G08510 | 64.200 | 581 | 162 | 7 | 2 | 574 | 10 | 552 | 0.0 | 747 |
| MS.gene008126.t1 | AT2G40116 | 59.140 | 558 | 198 | 7 | 32 | 573 | 69 | 612 | 0.0 | 662 |
| MS.gene008126.t1 | AT5G58700 | 56.314 | 586 | 233 | 7 | 6 | 574 | 18 | 597 | 0.0 | 657 |
| MS.gene008126.t1 | AT5G58700 | 56.314 | 586 | 233 | 7 | 6 | 574 | 18 | 597 | 0.0 | 657 |
| MS.gene008126.t1 | AT5G58700 | 62.857 | 490 | 175 | 4 | 88 | 574 | 4 | 489 | 0.0 | 631 |
| MS.gene008126.t1 | AT5G58690 | 52.316 | 583 | 227 | 7 | 15 | 574 | 24 | 578 | 0.0 | 603 |
| MS.gene008126.t1 | AT5G58690 | 52.316 | 583 | 227 | 7 | 15 | 574 | 5 | 559 | 0.0 | 603 |
| MS.gene008126.t1 | AT5G58690 | 52.316 | 583 | 227 | 7 | 15 | 574 | 24 | 578 | 0.0 | 603 |
| MS.gene008126.t1 | AT5G58670 | 50.515 | 582 | 242 | 5 | 2 | 571 | 9 | 556 | 0.0 | 568 |
| MS.gene008126.t1 | AT4G38530 | 48.427 | 572 | 249 | 8 | 12 | 571 | 18 | 555 | 0.0 | 529 |
| MS.gene008126.t1 | AT3G47290 | 39.726 | 511 | 245 | 10 | 65 | 573 | 81 | 530 | 5.16e-119 | 362 |
| MS.gene008126.t1 | AT3G47290 | 39.604 | 505 | 239 | 11 | 65 | 567 | 81 | 521 | 3.68e-115 | 354 |
| MS.gene008126.t1 | AT3G47220 | 36.177 | 586 | 289 | 12 | 7 | 573 | 11 | 530 | 2.30e-110 | 340 |
Find 137 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATAATCCATTAAT+TGG | 0.072901 | 3.1:-56729690 | MS.gene008126:CDS |
| ATAATAGTTGGTTGCCTTCT+TGG | 0.178944 | 3.1:-56728521 | MS.gene008126:CDS |
| AGGATCGAAAACCTCATTAT+TGG | 0.216160 | 3.1:+56729268 | None:intergenic |
| CAAATGTTTGACGTCTATTA+AGG | 0.230837 | 3.1:-56730852 | MS.gene008126:CDS |
| CCATGCATCCACCCAATTAA+TGG | 0.240859 | 3.1:+56729678 | None:intergenic |
| TAATTAGGTCACTGTATATA+TGG | 0.245203 | 3.1:-56729096 | MS.gene008126:intron |
| TGGTTCTTTGGCAGGGTTAT+GGG | 0.259926 | 3.1:-56729379 | MS.gene008126:intron |
| TGTAGTCATCTGATGCATTT+TGG | 0.262746 | 3.1:+56730225 | None:intergenic |
| GTGGTTCTTTGGCAGGGTTA+TGG | 0.264327 | 3.1:-56729380 | MS.gene008126:intron |
| CTTAGACGTCTCACTTTATC+AGG | 0.266369 | 3.1:+56730137 | None:intergenic |
| CCCGCTTTCTGTTCCGGAGC+TGG | 0.275180 | 3.1:-56728481 | MS.gene008126:CDS |
| TTTGATGGCAAATGAGCTTT+AGG | 0.277773 | 3.1:+56729248 | None:intergenic |
| CTTATGCAGGTTGGAATTGC+TGG | 0.289356 | 3.1:-56728585 | MS.gene008126:intron |
| TGAATTCCCGCTTTCTGTTC+CGG | 0.306917 | 3.1:-56728487 | MS.gene008126:CDS |
| AGGGTTATGGGAGATCTCTT+TGG | 0.311117 | 3.1:-56729367 | MS.gene008126:CDS |
| GGATCGAAAACCTCATTATT+GGG | 0.335505 | 3.1:+56729269 | None:intergenic |
| GGTCATAATTCTTATCTAAC+TGG | 0.348463 | 3.1:-56731120 | MS.gene008126:CDS |
| CTCTGAAGTGCTTCGATGAT+GGG | 0.355533 | 3.1:+56731066 | None:intergenic |
| CGCTTAATTGCCATTCATGC+TGG | 0.358294 | 3.1:-56730200 | MS.gene008126:CDS |
| CTTCGTTGCGTCTGAATATC+CGG | 0.360784 | 3.1:-56730822 | MS.gene008126:CDS |
| GAGTTATTGAATTGGATATA+TGG | 0.361839 | 3.1:-56731035 | MS.gene008126:CDS |
| CCACCTTACTCCTGATCTTC+AGG | 0.370917 | 3.1:-56730780 | MS.gene008126:CDS |
| TAGATGGTTACTCAAACATT+TGG | 0.373406 | 3.1:-56730634 | MS.gene008126:CDS |
| TCACAGAAGGGAAAGCCTTT+AGG | 0.380419 | 3.1:-56730475 | MS.gene008126:CDS |
| ATGTCTGAGAAGGATGATTT+TGG | 0.381957 | 3.1:-56728426 | MS.gene008126:CDS |
| GGAGGCACCGCCGGAGATAA+AGG | 0.382295 | 3.1:-56732083 | MS.gene008126:CDS |
| CATTCCACTATTCCACCTTT+AGG | 0.387588 | 3.1:+56730173 | None:intergenic |
| GCCACTTTGGCCTGAAGATC+AGG | 0.391390 | 3.1:+56730770 | None:intergenic |
| TATATGGCCAAATGACTCTA+AGG | 0.397917 | 3.1:-56731019 | MS.gene008126:CDS |
| ACATCATCCTTAGAGTCATT+TGG | 0.405986 | 3.1:+56731012 | None:intergenic |
| TTTAGGTGATGAAGAAGCTT+GGG | 0.407451 | 3.1:-56730458 | MS.gene008126:CDS |
| TCTCTGAAGTGCTTCGATGA+TGG | 0.421908 | 3.1:+56731065 | None:intergenic |
| AGGTGTTAGAGTTATTGAAT+TGG | 0.437110 | 3.1:-56731043 | MS.gene008126:CDS |
| TCTTCTAGTGTTATTACAAC+CGG | 0.444726 | 3.1:+56730803 | None:intergenic |
| CATACCCTTGCATAGAAGTC+TGG | 0.448430 | 3.1:+56729020 | None:intergenic |
| TCTCCTTCGCGGGAATGTAA+TGG | 0.452778 | 3.1:+56728351 | None:intergenic |
| GATGATGTTGATGTCCTTCA+TGG | 0.454017 | 3.1:-56730997 | MS.gene008126:CDS |
| CAAATTATAATCCATTAATT+GGG | 0.455647 | 3.1:-56729689 | MS.gene008126:CDS |
| ATGCGAAGCAGCGCCAGCTC+CGG | 0.456222 | 3.1:+56728468 | None:intergenic |
| CATATGGAAAAGAAATTGTC+AGG | 0.456553 | 3.1:-56730079 | MS.gene008126:intron |
| AGATTCCGATGAAGCGGAAA+AGG | 0.459147 | 3.1:-56730252 | MS.gene008126:CDS |
| TTTAGGCTTCCCAGCATGAA+TGG | 0.462118 | 3.1:+56730190 | None:intergenic |
| CCTTGAAGCTAAAGAAGAAA+AGG | 0.464912 | 3.1:-56730509 | MS.gene008126:CDS |
| AAGGTACTCCTTAGGCGGCT+TGG | 0.465613 | 3.1:+56730528 | None:intergenic |
| GAAAAGGCTGCTGAAACATA+TGG | 0.467059 | 3.1:-56730095 | MS.gene008126:CDS |
| CTAACTAACCTGAGCCACTT+TGG | 0.472125 | 3.1:+56730757 | None:intergenic |
| ATAGTACCGCCTCTCAAACT+AGG | 0.474142 | 3.1:+56730424 | None:intergenic |
| GAGGTAATGCGTGTACCTTT+CGG | 0.479808 | 3.1:+56729714 | None:intergenic |
| TATCATCGTTACTCCGATGA+AGG | 0.484028 | 3.1:-56732055 | MS.gene008126:CDS |
| AGCTAAAGAAGAAAAGGAAA+AGG | 0.484145 | 3.1:-56730503 | MS.gene008126:CDS |
| AACAAAACCGCATCCTCCAT+TGG | 0.486065 | 3.1:+56729322 | None:intergenic |
| CCATTAATTGGGTGGATGCA+TGG | 0.487420 | 3.1:-56729678 | MS.gene008126:CDS |
| TCTTCAGGCCAAAGTGGCTC+AGG | 0.489930 | 3.1:-56730765 | MS.gene008126:intron |
| TCACATTATTACATATTCAC+TGG | 0.491218 | 3.1:-56731141 | MS.gene008126:CDS |
| CAAAGTCAACAGATAATAGT+TGG | 0.492685 | 3.1:-56728533 | MS.gene008126:CDS |
| AATTAGGTCACTGTATATAT+GGG | 0.492839 | 3.1:-56729095 | MS.gene008126:intron |
| GATGGTTGCATTTAACATGC+AGG | 0.494100 | 3.1:-56729649 | MS.gene008126:intron |
| CAAGCTTCTTCATCACCTAA+AGG | 0.494465 | 3.1:+56730460 | None:intergenic |
| TTGGTTGCCTTCTTGGAATG+AGG | 0.497276 | 3.1:-56728514 | MS.gene008126:CDS |
| CTTTAGGTGATGAAGAAGCT+TGG | 0.501759 | 3.1:-56730459 | MS.gene008126:CDS |
| TAAAGAAGAAAAGGAAAAGG+AGG | 0.506940 | 3.1:-56730500 | MS.gene008126:CDS |
| TGTCGATGAAGATGATCTTA+AGG | 0.513054 | 3.1:-56730282 | MS.gene008126:CDS |
| GAAAACTGGTCCCAATAATG+AGG | 0.515061 | 3.1:-56729279 | MS.gene008126:CDS |
| TCCTTTGAGGTTTCTGAGGT+AGG | 0.515273 | 3.1:+56730595 | None:intergenic |
| CGGTACTATAGCTGATTACA+AGG | 0.516593 | 3.1:-56730410 | MS.gene008126:intron |
| GTTGTATTTATCTCCTTCGC+GGG | 0.517351 | 3.1:+56728341 | None:intergenic |
| ATCGTTACTCCGATGAAGGC+GGG | 0.518193 | 3.1:-56732051 | MS.gene008126:CDS |
| ATCGGAGACGGAGGCACCGC+CGG | 0.519846 | 3.1:-56732092 | MS.gene008126:CDS |
| CAAGGAATGTTTAAAGCCAA+TGG | 0.521167 | 3.1:-56729338 | MS.gene008126:CDS |
| GAAGCCTAAAGGTGGAATAG+TGG | 0.523615 | 3.1:-56730177 | MS.gene008126:CDS |
| TTAGCTTCAAGGTACTCCTT+AGG | 0.524662 | 3.1:+56730520 | None:intergenic |
| TCTGAAGTGCTTCGATGATG+GGG | 0.528251 | 3.1:+56731067 | None:intergenic |
| AAGATCTCCACGATCAATGA+TGG | 0.528390 | 3.1:+56731949 | None:intergenic |
| TGGCCTGAAGATCAGGAGTA+AGG | 0.530572 | 3.1:+56730777 | None:intergenic |
| TGTCATGATCCCGCCTTCAT+CGG | 0.531322 | 3.1:+56732042 | None:intergenic |
| GCTTAATTGCCATTCATGCT+GGG | 0.532116 | 3.1:-56730199 | MS.gene008126:CDS |
| CATATCAACCAAGCCGCCTA+AGG | 0.532591 | 3.1:-56730536 | MS.gene008126:CDS |
| TGATAAAGTTCCTTTATCTC+CGG | 0.533476 | 3.1:+56732073 | None:intergenic |
| TGTTGTATTTATCTCCTTCG+CGG | 0.535824 | 3.1:+56728340 | None:intergenic |
| ATTATAATCCATTAATTGGG+TGG | 0.536189 | 3.1:-56729686 | MS.gene008126:CDS |
| AGGTGAAAGAAATTCCTTTG+AGG | 0.539167 | 3.1:+56730582 | None:intergenic |
| GGAAAAGGAGGAATCACAGA+AGG | 0.541089 | 3.1:-56730488 | MS.gene008126:CDS |
| AAAACACAGCGTATCGGAGA+CGG | 0.544068 | 3.1:-56732104 | MS.gene008126:CDS |
| TTTAAAGCCAATGGAGGATG+CGG | 0.547215 | 3.1:-56729329 | MS.gene008126:CDS |
| GCCAGCTCCGGAACAGAAAG+CGG | 0.549635 | 3.1:+56728480 | None:intergenic |
| ATTCATGCTGGGAAGCCTAA+AGG | 0.550977 | 3.1:-56730188 | MS.gene008126:CDS |
| AAGCGAGTCACAGCTCGAAA+AGG | 0.551984 | 3.1:-56730111 | MS.gene008126:CDS |
| CCAGCTCCGGAACAGAAAGC+GGG | 0.556338 | 3.1:+56728481 | None:intergenic |
| CTTCAATCAGAAAGCTTCTG+AGG | 0.557081 | 3.1:+56732011 | None:intergenic |
| TAGTACCGCCTCTCAAACTA+GGG | 0.558608 | 3.1:+56730425 | None:intergenic |
| TGAAGATGATCTTAAGGAGG+AGG | 0.558834 | 3.1:-56730276 | MS.gene008126:CDS |
| ACAATGGTAAACTCATATCT+TGG | 0.558961 | 3.1:+56731163 | None:intergenic |
| CGGATATTCAGACGCAACGA+AGG | 0.561402 | 3.1:+56730823 | None:intergenic |
| TAATGGATTATAATTTGATG+AGG | 0.561590 | 3.1:+56729695 | None:intergenic |
| GTGGATGCATGGAGCTCAGA+TGG | 0.561990 | 3.1:-56729667 | MS.gene008126:CDS |
| ACCCCAGTGGAAGGTAAAAG+AGG | 0.562878 | 3.1:+56731881 | None:intergenic |
| TCCTGATCTTCAGGCCAAAG+TGG | 0.568046 | 3.1:-56730771 | MS.gene008126:CDS |
| CATCGTTACTCCGATGAAGG+CGG | 0.573076 | 3.1:-56732052 | MS.gene008126:CDS |
| CCTGTGTGGGAACTAAGAAA+CGG | 0.577952 | 3.1:-56728387 | MS.gene008126:CDS |
| ATCTCCAGACTTCTATGCAA+GGG | 0.579812 | 3.1:-56729024 | MS.gene008126:intron |
| GCTTCAAGGTACTCCTTAGG+CGG | 0.582171 | 3.1:+56730523 | None:intergenic |
| AGATCTCTTTGGTTGATGCA+AGG | 0.584104 | 3.1:-56729356 | MS.gene008126:CDS |
| CTGAAGTGCTTCGATGATGG+GGG | 0.585163 | 3.1:+56731068 | None:intergenic |
| GTCACTGTATATATGGGAGA+AGG | 0.587116 | 3.1:-56729089 | MS.gene008126:CDS |
| TCAAATACCTCATTCCAAGA+AGG | 0.587279 | 3.1:+56728507 | None:intergenic |
| CATCTCCAGACTTCTATGCA+AGG | 0.588070 | 3.1:-56729025 | MS.gene008126:CDS |
| AAGAGGATTACCCCAGTGGA+AGG | 0.591185 | 3.1:+56731872 | None:intergenic |
| GGAGGAAGATTCCGATGAAG+CGG | 0.594226 | 3.1:-56730258 | MS.gene008126:CDS |
| GTTCCATTACATTCCCGCGA+AGG | 0.594715 | 3.1:-56728354 | MS.gene008126:CDS |
| AAATTCCTTTGAGGTTTCTG+AGG | 0.594965 | 3.1:+56730591 | None:intergenic |
| GGTAAACTTACATTCCATGA+AGG | 0.597062 | 3.1:+56730983 | None:intergenic |
| TTCTATCTTTAGCAAAACAG+TGG | 0.603639 | 3.1:-56730305 | MS.gene008126:intron |
| GAAAAGGAGGAATCACAGAA+GGG | 0.605582 | 3.1:-56730487 | MS.gene008126:CDS |
| CGATGAAGATGATCTTAAGG+AGG | 0.606898 | 3.1:-56730279 | MS.gene008126:CDS |
| AAAGAAGTCCCTAGTTTGAG+AGG | 0.608524 | 3.1:-56730433 | MS.gene008126:CDS |
| AAACATTTGATAAGTGCCAC+AGG | 0.609405 | 3.1:+56730866 | None:intergenic |
| TCCTACCTCAGAAACCTCAA+AGG | 0.616696 | 3.1:-56730596 | MS.gene008126:CDS |
| TAAAGTTCCTTTATCTCCGG+CGG | 0.616964 | 3.1:+56732076 | None:intergenic |
| AATATGTAATAATGTGACAA+TGG | 0.622860 | 3.1:+56731147 | None:intergenic |
| CCGTTTCTTAGTTCCCACAC+AGG | 0.623175 | 3.1:+56728387 | None:intergenic |
| CTGTATATATGGGAGAAGGA+TGG | 0.631132 | 3.1:-56729085 | MS.gene008126:CDS |
| ACAAACATGCTTACCTGTGT+GGG | 0.631770 | 3.1:-56728400 | MS.gene008126:CDS |
| TGAATATGACATGTCTGAGA+AGG | 0.639315 | 3.1:-56728436 | MS.gene008126:CDS |
| CAGGACATTGACGACTCCTG+TGG | 0.642402 | 3.1:-56730882 | MS.gene008126:CDS |
| ACACAAGCCATCATTGATCG+TGG | 0.646149 | 3.1:-56731956 | MS.gene008126:CDS |
| TTAGGTGATGAAGAAGCTTG+GGG | 0.654802 | 3.1:-56730457 | MS.gene008126:CDS |
| AATAGTGGAATGTCTCAAAG+TGG | 0.664523 | 3.1:-56730162 | MS.gene008126:CDS |
| GACAAACATGCTTACCTGTG+TGG | 0.665048 | 3.1:-56728401 | MS.gene008126:CDS |
| CCAGTGGAAGGTAAAAGAGG+AGG | 0.668421 | 3.1:+56731884 | None:intergenic |
| CCTGAAGATCAGGAGTAAGG+TGG | 0.674793 | 3.1:+56730780 | None:intergenic |
| GGAATGTTTAAAGCCAATGG+AGG | 0.677096 | 3.1:-56729335 | MS.gene008126:CDS |
| CATGCTGGGAAGCCTAAAGG+TGG | 0.677747 | 3.1:-56730185 | MS.gene008126:CDS |
| ATATTGCGAGTGTATCCGAA+AGG | 0.679225 | 3.1:-56729729 | MS.gene008126:CDS |
| GAAGTCCCTAGTTTGAGAGG+CGG | 0.688180 | 3.1:-56730430 | MS.gene008126:CDS |
| ACACAGCGTATCGGAGACGG+AGG | 0.693737 | 3.1:-56732101 | MS.gene008126:CDS |
| GTAAAAGAGGATTACCCCAG+TGG | 0.701192 | 3.1:+56731868 | None:intergenic |
| ATCATCGAAGCACTTCAGAG+AGG | 0.734048 | 3.1:-56731063 | MS.gene008126:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTATTTCAATAACAA+AGG | + | chr3.1:56731635-56731654 | None:intergenic | 10.0% |
| !!! | ATTTTTAGATAAATCAATTT+TGG | + | chr3.1:56728998-56729017 | None:intergenic | 10.0% |
| !!! | TTTTTAGATAAATCAATTTT+GGG | + | chr3.1:56728997-56729016 | None:intergenic | 10.0% |
| !! | CAAATTATAATCCATTAATT+GGG | - | chr3.1:56730737-56730756 | MS.gene008126:intron | 15.0% |
| !! | TCAAATAAAATAATTCATAC+AGG | + | chr3.1:56731456-56731475 | None:intergenic | 15.0% |
| !! | TCAAATTATAATCCATTAAT+TGG | - | chr3.1:56730736-56730755 | MS.gene008126:intron | 15.0% |
| !!! | TAAGATTTAAGATGATTTAT+GGG | - | chr3.1:56731430-56731449 | MS.gene008126:intron | 15.0% |
| !!! | TTTTAGATAAATCAATTTTG+GGG | + | chr3.1:56728996-56729015 | None:intergenic | 15.0% |
| !! | AATATGTAATAATGTGACAA+TGG | + | chr3.1:56729282-56729301 | None:intergenic | 20.0% |
| !! | AATGTTGTATATAAATTGCA+AGG | - | chr3.1:56730053-56730072 | MS.gene008126:intron | 20.0% |
| !! | CGAAGAATTAGAAAAATATA+TGG | + | chr3.1:56731741-56731760 | None:intergenic | 20.0% |
| !! | TCAACTCTATAAATTATGTT+TGG | + | chr3.1:56729022-56729041 | None:intergenic | 20.0% |
| !! | TTTAATCCAGTAACAATAAA+AGG | + | chr3.1:56730458-56730477 | None:intergenic | 20.0% |
| !!! | ATGATATATTATTTTTGCTG+TGG | - | chr3.1:56731023-56731042 | MS.gene008126:CDS | 20.0% |
| !!! | ATTTAATTTAAAAGCCAACA+AGG | + | chr3.1:56728583-56728602 | None:intergenic | 20.0% |
| !!! | CATTTATATTCAATTAGCTT+TGG | - | chr3.1:56730585-56730604 | MS.gene008126:CDS | 20.0% |
| !!! | CTAAGATTTAAGATGATTTA+TGG | - | chr3.1:56731429-56731448 | MS.gene008126:intron | 20.0% |
| !!! | GTAATTTTTATGAACTATGT+TGG | - | chr3.1:56729183-56729202 | MS.gene008126:intron | 20.0% |
| !!! | TAATGGATTATAATTTGATG+AGG | + | chr3.1:56730734-56730753 | None:intergenic | 20.0% |
| !!! | TGATATATTATTTTTGCTGT+GGG | - | chr3.1:56731024-56731043 | MS.gene008126:CDS | 20.0% |
| ! | AAATATATGGATGCTATAAC+TGG | + | chr3.1:56731728-56731747 | None:intergenic | 25.0% |
| ! | AATCTCACATACAAAATTAG+AGG | + | chr3.1:56730080-56730099 | None:intergenic | 25.0% |
| ! | AATTAGGTCACTGTATATAT+GGG | - | chr3.1:56731331-56731350 | MS.gene008126:intron | 25.0% |
| ! | ATTATAATCCATTAATTGGG+TGG | - | chr3.1:56730740-56730759 | MS.gene008126:intron | 25.0% |
| ! | GAGTTATTGAATTGGATATA+TGG | - | chr3.1:56729391-56729410 | MS.gene008126:intron | 25.0% |
| ! | GTTGTCATTAGTAAAATACA+TGG | + | chr3.1:56729507-56729526 | None:intergenic | 25.0% |
| ! | TAAATATTTGTCCTTGACAA+TGG | - | chr3.1:56730489-56730508 | MS.gene008126:CDS | 25.0% |
| ! | TAATTAGGTCACTGTATATA+TGG | - | chr3.1:56731330-56731349 | MS.gene008126:intron | 25.0% |
| ! | TAATTGATAAACTCTTATGC+AGG | - | chr3.1:56731828-56731847 | MS.gene008126:intron | 25.0% |
| ! | TCACATTATTACATATTCAC+TGG | - | chr3.1:56729285-56729304 | MS.gene008126:CDS | 25.0% |
| ! | TGTTGGAGATATAATTCAAA+CGG | + | chr3.1:56729467-56729486 | None:intergenic | 25.0% |
| !! | AACCATCTAAAATTTGAACA+GGG | + | chr3.1:56729781-56729800 | None:intergenic | 25.0% |
| !! | TAACCATCTAAAATTTGAAC+AGG | + | chr3.1:56729782-56729801 | None:intergenic | 25.0% |
| !! | TATAATTTTACCTGTTGCAT+TGG | - | chr3.1:56730419-56730438 | MS.gene008126:CDS | 25.0% |
| !! | TCTAATTTTGTATGTGAGAT+TGG | - | chr3.1:56730079-56730098 | MS.gene008126:intron | 25.0% |
| !! | TGCTTTTCTTACTCTTAATT+AGG | - | chr3.1:56731315-56731334 | MS.gene008126:intron | 25.0% |
| !! | TTCAATCCTTTTATTGTTAC+TGG | - | chr3.1:56730449-56730468 | MS.gene008126:CDS | 25.0% |
| !! | TTTTCATACCAGTATCAAAA+GGG | + | chr3.1:56731870-56731889 | None:intergenic | 25.0% |
| !! | TTTTGTCTTGAATTTCTCTT+TGG | - | chr3.1:56730927-56730946 | MS.gene008126:intron | 25.0% |
| !! | TTTTTCATACCAGTATCAAA+AGG | + | chr3.1:56731871-56731890 | None:intergenic | 25.0% |
| !!! | ATCCTTTTTTTAAGTGAATC+AGG | + | chr3.1:56729867-56729886 | None:intergenic | 25.0% |
| !!! | CTCACTTTTAAGTGTATATT+TGG | - | chr3.1:56728785-56728804 | MS.gene008126:intron | 25.0% |
| AACCTATATTAGAGAGCTTA+TGG | + | chr3.1:56731571-56731590 | None:intergenic | 30.0% | |
| AATAAGTGATAACTTCCCTT+CGG | - | chr3.1:56731785-56731804 | MS.gene008126:intron | 30.0% | |
| AATCAAAGGCTACAAATAGT+AGG | - | chr3.1:56728946-56728965 | MS.gene008126:intron | 30.0% | |
| AATCTGTGTGTTAGAATCAA+AGG | - | chr3.1:56728932-56728951 | MS.gene008126:intron | 30.0% | |
| ACAAAATGATGCAATCTTAC+AGG | - | chr3.1:56729525-56729544 | MS.gene008126:intron | 30.0% | |
| ACAATGGTAAACTCATATCT+TGG | + | chr3.1:56729266-56729285 | None:intergenic | 30.0% | |
| ACGGCTACTAATTGAAAATT+TGG | - | chr3.1:56730858-56730877 | MS.gene008126:CDS | 30.0% | |
| AGCTAAAGAAGAAAAGGAAA+AGG | - | chr3.1:56729923-56729942 | MS.gene008126:intron | 30.0% | |
| AGGTGTTAGAGTTATTGAAT+TGG | - | chr3.1:56729383-56729402 | MS.gene008126:intron | 30.0% | |
| ATAACTGGAACATAACTGTT+TGG | + | chr3.1:56731713-56731732 | None:intergenic | 30.0% | |
| ATGAATTCTCGTCAAATTGT+TGG | + | chr3.1:56729484-56729503 | None:intergenic | 30.0% | |
| ATTAAGCTGAAAACAGCTTA+TGG | + | chr3.1:56731547-56731566 | None:intergenic | 30.0% | |
| CAAAGTCAACAGATAATAGT+TGG | - | chr3.1:56731893-56731912 | MS.gene008126:CDS | 30.0% | |
| CAAATGTTTGACGTCTATTA+AGG | - | chr3.1:56729574-56729593 | MS.gene008126:intron | 30.0% | |
| CACCTGATTCACTTAAAAAA+AGG | - | chr3.1:56729862-56729881 | MS.gene008126:intron | 30.0% | |
| CATATGGAAAAGAAATTGTC+AGG | - | chr3.1:56730347-56730366 | MS.gene008126:intron | 30.0% | |
| CATGTAAAGTGGTTTATGTT+TGG | + | chr3.1:56728757-56728776 | None:intergenic | 30.0% | |
| CGGCTACTAATTGAAAATTT+GGG | - | chr3.1:56730859-56730878 | MS.gene008126:CDS | 30.0% | |
| CTCTAGACTTGATTATAACA+AGG | - | chr3.1:56731289-56731308 | MS.gene008126:intron | 30.0% | |
| GAGTTACATTACATGTAAAG+TGG | + | chr3.1:56728768-56728787 | None:intergenic | 30.0% | |
| GGCTACTAATTGAAAATTTG+GGG | - | chr3.1:56730860-56730879 | MS.gene008126:CDS | 30.0% | |
| GGTCATAATTCTTATCTAAC+TGG | - | chr3.1:56729306-56729325 | MS.gene008126:CDS | 30.0% | |
| TAAAGAAGAAAAGGAAAAGG+AGG | - | chr3.1:56729926-56729945 | MS.gene008126:intron | 30.0% | |
| TAGATGGTTACTCAAACATT+TGG | - | chr3.1:56729792-56729811 | MS.gene008126:intron | 30.0% | |
| TATATAACAAGAAACCTGTG+AGG | - | chr3.1:56730829-56730848 | MS.gene008126:CDS | 30.0% | |
| TGATAAAGTTCCTTTATCTC+CGG | + | chr3.1:56728356-56728375 | None:intergenic | 30.0% | |
| TTCCATAAGCTCTCTAATAT+AGG | - | chr3.1:56731566-56731585 | MS.gene008126:intron | 30.0% | |
| TTCTATCTTTAGCAAAACAG+TGG | - | chr3.1:56730121-56730140 | MS.gene008126:CDS | 30.0% | |
| ! | ACCTTCAAAGTAGTTTTTGA+TGG | + | chr3.1:56731196-56731215 | None:intergenic | 30.0% |
| ! | AGTGACAAAATTGGTTTAAG+AGG | - | chr3.1:56728659-56728678 | MS.gene008126:intron | 30.0% |
| ! | ATTTTGTATGTGAGATTGGT+TGG | - | chr3.1:56730083-56730102 | MS.gene008126:CDS | 30.0% |
| ! | CCAGTTTTCAATAGAAAATC+AGG | + | chr3.1:56731136-56731155 | None:intergenic | 30.0% |
| ! | CCTGATTTTCTATTGAAAAC+TGG | - | chr3.1:56731133-56731152 | MS.gene008126:CDS | 30.0% |
| ! | TAGATAAAGTGCTTTGTGTT+TGG | - | chr3.1:56728878-56728897 | MS.gene008126:intron | 30.0% |
| ! | TCTTCTAGTGTTATTACAAC+CGG | + | chr3.1:56729626-56729645 | None:intergenic | 30.0% |
| ! | TTGAGTAGTGACTTTTACAA+GGG | - | chr3.1:56731238-56731257 | MS.gene008126:intron | 30.0% |
| ! | TTTGAGTAGTGACTTTTACA+AGG | - | chr3.1:56731237-56731256 | MS.gene008126:intron | 30.0% |
| !! | TTATAGAGTTGAGTTGCTTT+TGG | - | chr3.1:56729030-56729049 | MS.gene008126:CDS | 30.0% |
| !!! | TATATTATTTTTGCTGTGGG+TGG | - | chr3.1:56731027-56731046 | MS.gene008126:CDS | 30.0% |
| AAAAGCCAACAAGGTAAAAG+AGG | + | chr3.1:56728574-56728593 | None:intergenic | 35.0% | |
| AAACATTTGATAAGTGCCAC+AGG | + | chr3.1:56729563-56729582 | None:intergenic | 35.0% | |
| AATGTCTTGATACAGCTGAA+AGG | + | chr3.1:56730980-56730999 | None:intergenic | 35.0% | |
| ACATCATCCTTAGAGTCATT+TGG | + | chr3.1:56729417-56729436 | None:intergenic | 35.0% | |
| ACGAAAACAGCTTATAAGCA+AGG | - | chr3.1:56731591-56731610 | MS.gene008126:intron | 35.0% | |
| ACTATGTTGGTGTGTGATAA+TGG | - | chr3.1:56729196-56729215 | MS.gene008126:intron | 35.0% | |
| AGGATCGAAAACCTCATTAT+TGG | + | chr3.1:56731161-56731180 | None:intergenic | 35.0% | |
| AGGTGAAAGAAATTCCTTTG+AGG | + | chr3.1:56729847-56729866 | None:intergenic | 35.0% | |
| ATAATAGTTGGTTGCCTTCT+TGG | - | chr3.1:56731905-56731924 | MS.gene008126:CDS | 35.0% | |
| CCTTGAAGCTAAAGAAGAAA+AGG | - | chr3.1:56729917-56729936 | MS.gene008126:intron | 35.0% | |
| GCCATCAAAAACTACTTTGA+AGG | - | chr3.1:56731192-56731211 | MS.gene008126:intron | 35.0% | |
| GGATCGAAAACCTCATTATT+GGG | + | chr3.1:56731160-56731179 | None:intergenic | 35.0% | |
| GGTAAACTTACATTCCATGA+AGG | + | chr3.1:56729446-56729465 | None:intergenic | 35.0% | |
| TATATGGCCAAATGACTCTA+AGG | - | chr3.1:56729407-56729426 | MS.gene008126:intron | 35.0% | |
| TCAAATACCTCATTCCAAGA+AGG | + | chr3.1:56731922-56731941 | None:intergenic | 35.0% | |
| TCTTGAATTTCTCTTTGGTG+AGG | - | chr3.1:56730932-56730951 | MS.gene008126:intron | 35.0% | |
| TGAATATGACATGTCTGAGA+AGG | - | chr3.1:56731990-56732009 | MS.gene008126:CDS | 35.0% | |
| TGATAAACTCTTATGCAGGT+TGG | - | chr3.1:56731832-56731851 | MS.gene008126:intron | 35.0% | |
| TGTCGATGAAGATGATCTTA+AGG | - | chr3.1:56730144-56730163 | MS.gene008126:CDS | 35.0% | |
| TGTTGTATTTATCTCCTTCG+CGG | + | chr3.1:56732089-56732108 | None:intergenic | 35.0% | |
| TTCTTAGATGGCATATCGAA+CGG | - | chr3.1:56730526-56730545 | MS.gene008126:CDS | 35.0% | |
| TTTAGGTGATGAAGAAGCTT+GGG | - | chr3.1:56729968-56729987 | MS.gene008126:intron | 35.0% | |
| ! | AATAGTGGAATGTCTCAAAG+TGG | - | chr3.1:56730264-56730283 | MS.gene008126:CDS | 35.0% |
| ! | AGCCCTGTTCAAATTTTAGA+TGG | - | chr3.1:56729776-56729795 | MS.gene008126:intron | 35.0% |
| ! | ATGTCTGAGAAGGATGATTT+TGG | - | chr3.1:56732000-56732019 | MS.gene008126:CDS | 35.0% |
| ! | CAAAAACTACTTTGAAGGTG+AGG | - | chr3.1:56731197-56731216 | MS.gene008126:intron | 35.0% |
| ! | CAAGGAATGTTTAAAGCCAA+TGG | - | chr3.1:56731088-56731107 | MS.gene008126:CDS | 35.0% |
| ! | CAATTTTGTCACTCGAAACA+AGG | + | chr3.1:56728652-56728671 | None:intergenic | 35.0% |
| ! | CTGTTTCTTTGTGTGATTTC+AGG | - | chr3.1:56729236-56729255 | MS.gene008126:CDS | 35.0% |
| ! | CTTGTTTCGAGTGACAAAAT+TGG | - | chr3.1:56728650-56728669 | MS.gene008126:intron | 35.0% |
| ! | GTAATCCTCTTTTACCTTGT+TGG | - | chr3.1:56728566-56728585 | MS.gene008126:CDS | 35.0% |
| ! | TGTAGTCATCTGATGCATTT+TGG | + | chr3.1:56730204-56730223 | None:intergenic | 35.0% |
| ! | TTTGATGGCAAATGAGCTTT+AGG | + | chr3.1:56731181-56731200 | None:intergenic | 35.0% |
| !! | AAATTCCTTTGAGGTTTCTG+AGG | + | chr3.1:56729838-56729857 | None:intergenic | 35.0% |
| !! | CCTTTTCTTCTTTAGCTTCA+AGG | + | chr3.1:56729920-56729939 | None:intergenic | 35.0% |
| !! | GCACTTGAAAAGCACTTATA+AGG | - | chr3.1:56729052-56729071 | MS.gene008126:CDS | 35.0% |
| !! | GTGTATATTTGGTTCTGCAT+TGG | - | chr3.1:56728796-56728815 | MS.gene008126:intron | 35.0% |
| AAAGAAGTCCCTAGTTTGAG+AGG | - | chr3.1:56729993-56730012 | MS.gene008126:intron | 40.0% | |
| AAGATCTCCACGATCAATGA+TGG | + | chr3.1:56728480-56728499 | None:intergenic | 40.0% | |
| ACAAACATGCTTACCTGTGT+GGG | - | chr3.1:56732026-56732045 | MS.gene008126:CDS | 40.0% | |
| ACCGAAAAAACACAGCGTAT+CGG | - | chr3.1:56728316-56728335 | MS.gene008126:CDS | 40.0% | |
| ATATTGCGAGTGTATCCGAA+AGG | - | chr3.1:56730697-56730716 | MS.gene008126:intron | 40.0% | |
| ATCTCCAGACTTCTATGCAA+GGG | - | chr3.1:56731402-56731421 | MS.gene008126:intron | 40.0% | |
| ATGCCATCTAAGAAGACTGT+TGG | + | chr3.1:56730520-56730539 | None:intergenic | 40.0% | |
| CAAGCTTCTTCATCACCTAA+AGG | + | chr3.1:56729969-56729988 | None:intergenic | 40.0% | |
| CATTCCACTATTCCACCTTT+AGG | + | chr3.1:56730256-56730275 | None:intergenic | 40.0% | |
| CGATGAAGATGATCTTAAGG+AGG | - | chr3.1:56730147-56730166 | MS.gene008126:CDS | 40.0% | |
| CGGTACTATAGCTGATTACA+AGG | - | chr3.1:56730016-56730035 | MS.gene008126:intron | 40.0% | |
| CTCAAATCTCAAAGCCGTAA+AGG | + | chr3.1:56731223-56731242 | None:intergenic | 40.0% | |
| CTGTATATATGGGAGAAGGA+TGG | - | chr3.1:56731341-56731360 | MS.gene008126:intron | 40.0% | |
| CTTAGACGTCTCACTTTATC+AGG | + | chr3.1:56730292-56730311 | None:intergenic | 40.0% | |
| CTTCAATCAGAAAGCTTCTG+AGG | + | chr3.1:56728418-56728437 | None:intergenic | 40.0% | |
| CTTTAGGTGATGAAGAAGCT+TGG | - | chr3.1:56729967-56729986 | MS.gene008126:intron | 40.0% | |
| GAAAACTGGTCCCAATAATG+AGG | - | chr3.1:56731147-56731166 | MS.gene008126:CDS | 40.0% | |
| GAAAAGGAGGAATCACAGAA+GGG | - | chr3.1:56729939-56729958 | MS.gene008126:intron | 40.0% | |
| GAAAAGGCTGCTGAAACATA+TGG | - | chr3.1:56730331-56730350 | MS.gene008126:intron | 40.0% | |
| GATGATGTTGATGTCCTTCA+TGG | - | chr3.1:56729429-56729448 | MS.gene008126:intron | 40.0% | |
| GATGGTTGCATTTAACATGC+AGG | - | chr3.1:56730777-56730796 | MS.gene008126:CDS | 40.0% | |
| GCTTAATTGCCATTCATGCT+GGG | - | chr3.1:56730227-56730246 | MS.gene008126:CDS | 40.0% | |
| GTCACTGTATATATGGGAGA+AGG | - | chr3.1:56731337-56731356 | MS.gene008126:intron | 40.0% | |
| GTCTAGAGACACTTGAATGA+CGG | + | chr3.1:56731277-56731296 | None:intergenic | 40.0% | |
| GTTGTATTTATCTCCTTCGC+GGG | + | chr3.1:56732088-56732107 | None:intergenic | 40.0% | |
| TAAAGTTCCTTTATCTCCGG+CGG | + | chr3.1:56728353-56728372 | None:intergenic | 40.0% | |
| TATCATCGTTACTCCGATGA+AGG | - | chr3.1:56728371-56728390 | MS.gene008126:CDS | 40.0% | |
| TCAACACTCAAGTGCATGTT+TGG | + | chr3.1:56729142-56729161 | None:intergenic | 40.0% | |
| TCACCAACAGTCTTCTTAGA+TGG | - | chr3.1:56730514-56730533 | MS.gene008126:CDS | 40.0% | |
| TGAAGATGATCTTAAGGAGG+AGG | - | chr3.1:56730150-56730169 | MS.gene008126:CDS | 40.0% | |
| TTAGGTGATGAAGAAGCTTG+GGG | - | chr3.1:56729969-56729988 | MS.gene008126:intron | 40.0% | |
| TTGATCCTCTGATTGTTGAC+AGG | - | chr3.1:56730659-56730678 | MS.gene008126:intron | 40.0% | |
| ! | AGATCTCTTTGGTTGATGCA+AGG | - | chr3.1:56731070-56731089 | MS.gene008126:CDS | 40.0% |
| ! | GGAATGTTTAAAGCCAATGG+AGG | - | chr3.1:56731091-56731110 | MS.gene008126:CDS | 40.0% |
| ! | TCTGAGAAGGATGATTTTGG+TGG | - | chr3.1:56732003-56732022 | MS.gene008126:CDS | 40.0% |
| ! | TGTTGGTGAAACCATTGTCA+AGG | + | chr3.1:56730503-56730522 | None:intergenic | 40.0% |
| ! | TTAGCTTCAAGGTACTCCTT+AGG | + | chr3.1:56729909-56729928 | None:intergenic | 40.0% |
| ! | TTTAAAGCCAATGGAGGATG+CGG | - | chr3.1:56731097-56731116 | MS.gene008126:CDS | 40.0% |
| ! | TTTTCAATTAGTAGCCGTGC+TGG | + | chr3.1:56730856-56730875 | None:intergenic | 40.0% |
| !! | AGAAATGATAGAAGCACCGA+AGG | + | chr3.1:56731804-56731823 | None:intergenic | 40.0% |
| !! | CTTTGGAACAAACACATTGC+AGG | - | chr3.1:56730602-56730621 | MS.gene008126:CDS | 40.0% |
| !! | GAAATGATAGAAGCACCGAA+GGG | + | chr3.1:56731803-56731822 | None:intergenic | 40.0% |
| !!! | TCCGATACGCTGTGTTTTTT+CGG | + | chr3.1:56728320-56728339 | None:intergenic | 40.0% |
| AAAACACAGCGTATCGGAGA+CGG | - | chr3.1:56728322-56728341 | MS.gene008126:CDS | 45.0% | |
| AACAAAACCGCATCCTCCAT+TGG | + | chr3.1:56731107-56731126 | None:intergenic | 45.0% | |
| ACACAAGCCATCATTGATCG+TGG | - | chr3.1:56728470-56728489 | MS.gene008126:CDS | 45.0% | |
| AGATTCCGATGAAGCGGAAA+AGG | - | chr3.1:56730174-56730193 | MS.gene008126:CDS | 45.0% | |
| AGGGTTATGGGAGATCTCTT+TGG | - | chr3.1:56731059-56731078 | MS.gene008126:CDS | 45.0% | |
| ATAGTACCGCCTCTCAAACT+AGG | + | chr3.1:56730005-56730024 | None:intergenic | 45.0% | |
| ATTCATGCTGGGAAGCCTAA+AGG | - | chr3.1:56730238-56730257 | MS.gene008126:CDS | 45.0% | |
| CAAGTGCATGTTTGGATCTG+CGG | + | chr3.1:56729134-56729153 | None:intergenic | 45.0% | |
| CATACCCTTGCATAGAAGTC+TGG | + | chr3.1:56731409-56731428 | None:intergenic | 45.0% | |
| CATCTCCAGACTTCTATGCA+AGG | - | chr3.1:56731401-56731420 | MS.gene008126:intron | 45.0% | |
| CCATGCATCCACCCAATTAA+TGG | + | chr3.1:56730751-56730770 | None:intergenic | 45.0% | |
| CCATTAATTGGGTGGATGCA+TGG | - | chr3.1:56730748-56730767 | MS.gene008126:intron | 45.0% | |
| CCTGTGTGGGAACTAAGAAA+CGG | - | chr3.1:56732039-56732058 | MS.gene008126:CDS | 45.0% | |
| CGCTTAATTGCCATTCATGC+TGG | - | chr3.1:56730226-56730245 | MS.gene008126:CDS | 45.0% | |
| CTAACTAACCTGAGCCACTT+TGG | + | chr3.1:56729672-56729691 | None:intergenic | 45.0% | |
| CTTCGTTGCGTCTGAATATC+CGG | - | chr3.1:56729604-56729623 | MS.gene008126:intron | 45.0% | |
| GAAGCCTAAAGGTGGAATAG+TGG | - | chr3.1:56730249-56730268 | MS.gene008126:CDS | 45.0% | |
| GAATCAAGAGCCAATGCAAC+AGG | + | chr3.1:56730432-56730451 | None:intergenic | 45.0% | |
| GACAAACATGCTTACCTGTG+TGG | - | chr3.1:56732025-56732044 | MS.gene008126:CDS | 45.0% | |
| GAGGTAATGCGTGTACCTTT+CGG | + | chr3.1:56730715-56730734 | None:intergenic | 45.0% | |
| GGAAAAGGAGGAATCACAGA+AGG | - | chr3.1:56729938-56729957 | MS.gene008126:intron | 45.0% | |
| GTAAAAGAGGATTACCCCAG+TGG | + | chr3.1:56728561-56728580 | None:intergenic | 45.0% | |
| GTGAACCTGTCAACAATCAG+AGG | + | chr3.1:56730667-56730686 | None:intergenic | 45.0% | |
| TAGTACCGCCTCTCAAACTA+GGG | + | chr3.1:56730004-56730023 | None:intergenic | 45.0% | |
| TCACAGAAGGGAAAGCCTTT+AGG | - | chr3.1:56729951-56729970 | MS.gene008126:intron | 45.0% | |
| TCCTACCTCAGAAACCTCAA+AGG | - | chr3.1:56729830-56729849 | MS.gene008126:intron | 45.0% | |
| TGAACAGGGCTATCAACTGT+CGG | + | chr3.1:56729767-56729786 | None:intergenic | 45.0% | |
| TGAATTCCCGCTTTCTGTTC+CGG | - | chr3.1:56731939-56731958 | MS.gene008126:CDS | 45.0% | |
| TGGTTCTTTGGCAGGGTTAT+GGG | - | chr3.1:56731047-56731066 | MS.gene008126:CDS | 45.0% | |
| TTGGTTGCCTTCTTGGAATG+AGG | - | chr3.1:56731912-56731931 | MS.gene008126:CDS | 45.0% | |
| TTTAGGCTTCCCAGCATGAA+TGG | + | chr3.1:56730239-56730258 | None:intergenic | 45.0% | |
| ! | AGTGGCTCAGGTTAGTTAGT+TGG | - | chr3.1:56729673-56729692 | MS.gene008126:CDS | 45.0% |
| ! | ATCATCGAAGCACTTCAGAG+AGG | - | chr3.1:56729363-56729382 | MS.gene008126:CDS | 45.0% |
| ! | CTCCTCTTTTACCTTCCACT+GGG | - | chr3.1:56728543-56728562 | MS.gene008126:CDS | 45.0% |
| ! | CTTATGCAGGTTGGAATTGC+TGG | - | chr3.1:56731841-56731860 | MS.gene008126:intron | 45.0% |
| ! | CTTTGAAGGTGAGGCCTTTA+CGG | - | chr3.1:56731206-56731225 | MS.gene008126:intron | 45.0% |
| ! | TCCTCTTTTACCTTCCACTG+GGG | - | chr3.1:56728544-56728563 | MS.gene008126:CDS | 45.0% |
| ! | TCTGAAGTGCTTCGATGATG+GGG | + | chr3.1:56729362-56729381 | None:intergenic | 45.0% |
| !! | CTCTGAAGTGCTTCGATGAT+GGG | + | chr3.1:56729363-56729382 | None:intergenic | 45.0% |
| !! | TCCTTTGAGGTTTCTGAGGT+AGG | + | chr3.1:56729834-56729853 | None:intergenic | 45.0% |
| !! | TCTCTGAAGTGCTTCGATGA+TGG | + | chr3.1:56729364-56729383 | None:intergenic | 45.0% |
| !! | TTTTGCTGTGGGTGGTTCTT+TGG | - | chr3.1:56731035-56731054 | MS.gene008126:CDS | 45.0% |
| AAGAGGATTACCCCAGTGGA+AGG | + | chr3.1:56728557-56728576 | None:intergenic | 50.0% | |
| AAGCGAGTCACAGCTCGAAA+AGG | - | chr3.1:56730315-56730334 | MS.gene008126:intron | 50.0% | |
| ACCCCAGTGGAAGGTAAAAG+AGG | + | chr3.1:56728548-56728567 | None:intergenic | 50.0% | |
| ATCGTTACTCCGATGAAGGC+GGG | - | chr3.1:56728375-56728394 | MS.gene008126:CDS | 50.0% | |
| CATATCAACCAAGCCGCCTA+AGG | - | chr3.1:56729890-56729909 | MS.gene008126:intron | 50.0% | |
| CATCGTTACTCCGATGAAGG+CGG | - | chr3.1:56728374-56728393 | MS.gene008126:CDS | 50.0% | |
| CCACCTTACTCCTGATCTTC+AGG | - | chr3.1:56729646-56729665 | MS.gene008126:intron | 50.0% | |
| CCAGTGGAAGGTAAAAGAGG+AGG | + | chr3.1:56728545-56728564 | None:intergenic | 50.0% | |
| CCGTTTCTTAGTTCCCACAC+AGG | + | chr3.1:56732042-56732061 | None:intergenic | 50.0% | |
| CCTGAAGATCAGGAGTAAGG+TGG | + | chr3.1:56729649-56729668 | None:intergenic | 50.0% | |
| CGGATATTCAGACGCAACGA+AGG | + | chr3.1:56729606-56729625 | None:intergenic | 50.0% | |
| GAAGTCCCTAGTTTGAGAGG+CGG | - | chr3.1:56729996-56730015 | MS.gene008126:intron | 50.0% | |
| GGAGGAAGATTCCGATGAAG+CGG | - | chr3.1:56730168-56730187 | MS.gene008126:CDS | 50.0% | |
| GTGGTTCTTTGGCAGGGTTA+TGG | - | chr3.1:56731046-56731065 | MS.gene008126:CDS | 50.0% | |
| GTTCCATTACATTCCCGCGA+AGG | - | chr3.1:56732072-56732091 | MS.gene008126:CDS | 50.0% | |
| TCCTGATCTTCAGGCCAAAG+TGG | - | chr3.1:56729655-56729674 | MS.gene008126:CDS | 50.0% | |
| TCTCCTTCGCGGGAATGTAA+TGG | + | chr3.1:56732078-56732097 | None:intergenic | 50.0% | |
| TGGCCTGAAGATCAGGAGTA+AGG | + | chr3.1:56729652-56729671 | None:intergenic | 50.0% | |
| TGTCATGATCCCGCCTTCAT+CGG | + | chr3.1:56728387-56728406 | None:intergenic | 50.0% | |
| ! | CCTCCTCTTTTACCTTCCAC+TGG | - | chr3.1:56728542-56728561 | MS.gene008126:CDS | 50.0% |
| ! | CTGAAGTGCTTCGATGATGG+GGG | + | chr3.1:56729361-56729380 | None:intergenic | 50.0% |
| ! | GCTGGAGTCCCTTTTGATAC+TGG | - | chr3.1:56731859-56731878 | MS.gene008126:intron | 50.0% |
| ! | GCTTCAAGGTACTCCTTAGG+CGG | + | chr3.1:56729906-56729925 | None:intergenic | 50.0% |
| CAGGACATTGACGACTCCTG+TGG | - | chr3.1:56729544-56729563 | MS.gene008126:intron | 55.0% | |
| CATGCTGGGAAGCCTAAAGG+TGG | - | chr3.1:56730241-56730260 | MS.gene008126:CDS | 55.0% | |
| CTGTGGGTGGTTCTTTGGCA+GGG | - | chr3.1:56731040-56731059 | MS.gene008126:CDS | 55.0% | |
| GAAACCTGTGAGGTCCAGCA+CGG | - | chr3.1:56730839-56730858 | MS.gene008126:CDS | 55.0% | |
| GACGTGCTTGCGTTGCTCTT+GGG | - | chr3.1:56728697-56728716 | MS.gene008126:intron | 55.0% | |
| GTGGATGCATGGAGCTCAGA+TGG | - | chr3.1:56730759-56730778 | MS.gene008126:intron | 55.0% | |
| TCTTCAGGCCAAAGTGGCTC+AGG | - | chr3.1:56729661-56729680 | MS.gene008126:CDS | 55.0% | |
| TGACGTGCTTGCGTTGCTCT+TGG | - | chr3.1:56728696-56728715 | MS.gene008126:intron | 55.0% | |
| ! | AAGGTACTCCTTAGGCGGCT+TGG | + | chr3.1:56729901-56729920 | None:intergenic | 55.0% |
| ! | GCCACTTTGGCCTGAAGATC+AGG | + | chr3.1:56729659-56729678 | None:intergenic | 55.0% |
| ! | GCGTGCCTTTTCCGCTTCAT+CGG | + | chr3.1:56730182-56730201 | None:intergenic | 55.0% |
| ACACAGCGTATCGGAGACGG+AGG | - | chr3.1:56728325-56728344 | MS.gene008126:CDS | 60.0% | |
| CCAGCTCCGGAACAGAAAGC+GGG | + | chr3.1:56731948-56731967 | None:intergenic | 60.0% | |
| GCCAGCTCCGGAACAGAAAG+CGG | + | chr3.1:56731949-56731968 | None:intergenic | 60.0% | |
| GCTGTGGGTGGTTCTTTGGC+AGG | - | chr3.1:56731039-56731058 | MS.gene008126:CDS | 60.0% | |
| ATGCGAAGCAGCGCCAGCTC+CGG | + | chr3.1:56731961-56731980 | None:intergenic | 65.0% | |
| CCCGCTTTCTGTTCCGGAGC+TGG | - | chr3.1:56731945-56731964 | MS.gene008126:CDS | 65.0% | |
| GTAGCCGTGCTGGACCTCAC+AGG | + | chr3.1:56730846-56730865 | None:intergenic | 65.0% | |
| !! | GGAGGCACCGCCGGAGATAA+AGG | - | chr3.1:56728343-56728362 | MS.gene008126:CDS | 65.0% |
| !! | ATCGGAGACGGAGGCACCGC+CGG | - | chr3.1:56728334-56728353 | MS.gene008126:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 56728305 | 56732143 | 56728305 | ID=MS.gene008126 |
| chr3.1 | mRNA | 56728305 | 56732143 | 56728305 | ID=MS.gene008126.t1;Parent=MS.gene008126 |
| chr3.1 | exon | 56731883 | 56732143 | 56731883 | ID=MS.gene008126.t1.exon1;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56731883 | 56732143 | 56731883 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56730994 | 56731190 | 56730994 | ID=MS.gene008126.t1.exon2;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56730994 | 56731190 | 56730994 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56730766 | 56730901 | 56730766 | ID=MS.gene008126.t1.exon3;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56730766 | 56730901 | 56730766 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56730411 | 56730653 | 56730411 | ID=MS.gene008126.t1.exon4;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56730411 | 56730653 | 56730411 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56730080 | 56730315 | 56730080 | ID=MS.gene008126.t1.exon5;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56730080 | 56730315 | 56730080 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56729650 | 56729767 | 56729650 | ID=MS.gene008126.t1.exon6;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56729650 | 56729767 | 56729650 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56729235 | 56729387 | 56729235 | ID=MS.gene008126.t1.exon7;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56729235 | 56729387 | 56729235 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56729025 | 56729111 | 56729025 | ID=MS.gene008126.t1.exon8;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56729025 | 56729111 | 56729025 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| chr3.1 | exon | 56728305 | 56728598 | 56728305 | ID=MS.gene008126.t1.exon9;Parent=MS.gene008126.t1 |
| chr3.1 | CDS | 56728305 | 56728598 | 56728305 | ID=cds.MS.gene008126.t1;Parent=MS.gene008126.t1 |
| Gene Sequence |
| Protein sequence |
