Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008294.t1 | P04078.1 | 100 | 356 | 0 | 0 | 1 | 356 | 1 | 356 | 3.90E-213 | 750.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008294.t1 | P04078 | 100.0 | 356 | 0 | 0 | 1 | 356 | 1 | 356 | 9.5e-216 | 750.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008294.t1 | G7J9B8 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 3.1e-212 | 746.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008294 | MS.gene81828 | PPI |
| MS.gene93980 | MS.gene008294 | PPI |
| MS.gene042906 | MS.gene008294 | PPI |
| MS.gene72618 | MS.gene008294 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008294.t1 | MTR_3g065250 | 99.157 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 0.0 | 728 |
| MS.gene008294.t1 | MTR_6g071070 | 89.326 | 356 | 38 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| MS.gene008294.t1 | MTR_5g077950 | 87.042 | 355 | 46 | 0 | 2 | 356 | 3 | 357 | 0.0 | 657 |
| MS.gene008294.t1 | MTR_2g021255 | 79.213 | 356 | 74 | 0 | 1 | 356 | 57 | 412 | 0.0 | 612 |
| MS.gene008294.t1 | MTR_2g021242 | 75.562 | 356 | 87 | 0 | 1 | 356 | 57 | 412 | 0.0 | 590 |
| MS.gene008294.t1 | MTR_2g021255 | 78.042 | 337 | 74 | 0 | 1 | 337 | 57 | 393 | 0.0 | 562 |
| MS.gene008294.t1 | MTR_8g062840 | 58.000 | 100 | 29 | 2 | 257 | 356 | 1 | 87 | 2.23e-27 | 105 |
| MS.gene008294.t1 | MTR_2g021248 | 41.429 | 140 | 31 | 4 | 217 | 355 | 10 | 99 | 3.12e-21 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008294.t1 | AT5G37600 | 89.326 | 356 | 38 | 0 | 1 | 356 | 1 | 356 | 0.0 | 679 |
| MS.gene008294.t1 | AT1G66200 | 88.764 | 356 | 40 | 0 | 1 | 356 | 1 | 356 | 0.0 | 677 |
| MS.gene008294.t1 | AT5G16570 | 90.169 | 356 | 35 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| MS.gene008294.t1 | AT1G66200 | 86.575 | 365 | 40 | 1 | 1 | 356 | 1 | 365 | 0.0 | 669 |
| MS.gene008294.t1 | AT3G17820 | 85.552 | 353 | 51 | 0 | 1 | 353 | 1 | 353 | 0.0 | 644 |
| MS.gene008294.t1 | AT1G48470 | 81.065 | 338 | 64 | 0 | 16 | 353 | 16 | 353 | 0.0 | 598 |
| MS.gene008294.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene008294.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene008294.t1 | AT5G35630 | 76.966 | 356 | 82 | 0 | 1 | 356 | 59 | 414 | 0.0 | 596 |
| MS.gene008294.t1 | AT1G66200 | 88.889 | 252 | 28 | 0 | 1 | 252 | 1 | 252 | 5.23e-174 | 484 |
| MS.gene008294.t1 | AT5G16570 | 89.540 | 239 | 25 | 0 | 1 | 239 | 1 | 239 | 8.56e-162 | 452 |
Find 111 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGCAAACCTTAATTGGTTT+TGG | 0.177125 | 3.1:+54657473 | None:intergenic |
| CTTTGACCCAAAACCAATTA+AGG | 0.180257 | 3.1:-54657480 | MS.gene008294:intron |
| TGGAAATAGCAAACCTTAAT+TGG | 0.193278 | 3.1:+54657467 | None:intergenic |
| ATGGGTAGCTCGTTACATTT+TGG | 0.226756 | 3.1:-54657671 | MS.gene008294:CDS |
| CTGACATTAACACCTTCTTA+TGG | 0.238098 | 3.1:-54657062 | MS.gene008294:CDS |
| TCTAAATGGATCCTTGAAAA+TGG | 0.250502 | 3.1:+54658961 | None:intergenic |
| ATATTGTTACCCCTTCTAAA+TGG | 0.285580 | 3.1:+54658947 | None:intergenic |
| TCTCTGCTGGTGATGAGATA+TGG | 0.307171 | 3.1:-54657690 | MS.gene008294:CDS |
| ATGTCTCTTGTTGGTGGGAA+TGG | 0.309316 | 3.1:+54658479 | None:intergenic |
| AAGGAGCACATTGCTGCTTA+TGG | 0.324475 | 3.1:-54657126 | MS.gene008294:CDS |
| TTATGCAAAACTAGGGTGAT+TGG | 0.355807 | 3.1:-54657340 | MS.gene008294:intron |
| TGACATTAACACCTTCTTAT+GGG | 0.364511 | 3.1:-54657061 | MS.gene008294:intron |
| AGCTGTGAAGGGTCAGTAAC+TGG | 0.376973 | 3.1:+54659180 | None:intergenic |
| GGCAGCTGCATGTCTCTTGT+TGG | 0.378014 | 3.1:+54658470 | None:intergenic |
| TATGTCAGGATTGGTGGATC+TGG | 0.389845 | 3.1:-54659356 | MS.gene008294:intron |
| GTGGGAATGGGTTCTCCAGC+TGG | 0.392840 | 3.1:+54658492 | None:intergenic |
| AGAATCTAACCATATGTATT+CGG | 0.402832 | 3.1:+54660075 | None:intergenic |
| CAGGATTGGTGGATCTGGTT+TGG | 0.409454 | 3.1:-54659351 | MS.gene008294:CDS |
| TGAAAGCAATTGAGAAGCTT+GGG | 0.410163 | 3.1:-54657158 | MS.gene008294:CDS |
| ATCATGGAAGTAACAACATA+TGG | 0.411129 | 3.1:+54656763 | None:intergenic |
| TCCAGGAGCTTGACCTGTGC+TGG | 0.411245 | 3.1:+54659134 | None:intergenic |
| TAGAAGGGGTAACAATATCT+TGG | 0.417590 | 3.1:-54658942 | MS.gene008294:intron |
| CTGGTGCTCACACAAATTAC+AGG | 0.417888 | 3.1:-54657310 | MS.gene008294:intron |
| AAAGACATCAATTGGCCTCT+TGG | 0.419531 | 3.1:-54658279 | MS.gene008294:CDS |
| CCCTCAGTTGGTATCTCTGC+TGG | 0.420001 | 3.1:-54657703 | MS.gene008294:CDS |
| TTGAAAGCAATTGAGAAGCT+TGG | 0.420009 | 3.1:-54657159 | MS.gene008294:CDS |
| GGCAACGAGCGTAGATTGAC+AGG | 0.421220 | 3.1:-54657099 | MS.gene008294:CDS |
| TGTTGCAGAAAGACATCAAT+TGG | 0.424542 | 3.1:-54658287 | MS.gene008294:CDS |
| TGTCTCTTGTTGGTGGGAAT+GGG | 0.425962 | 3.1:+54658480 | None:intergenic |
| TAGAGGATCACTGAGGTTGC+TGG | 0.429246 | 3.1:-54657515 | MS.gene008294:CDS |
| GCTGGTGCTGACAAGGCATT+TGG | 0.430707 | 3.1:-54657956 | MS.gene008294:CDS |
| ATCAGGATGGCTGAAAATCT+TGG | 0.445473 | 3.1:+54658449 | None:intergenic |
| CTCTGCTGGTGATGAGATAT+GGG | 0.446320 | 3.1:-54657689 | MS.gene008294:CDS |
| CGGTGGTTTCGGAGAGGTCA+AGG | 0.456062 | 3.1:+54660110 | None:intergenic |
| GTTCATTATGTCAGGATTGG+TGG | 0.459850 | 3.1:-54659362 | MS.gene008294:intron |
| GTGGATCTGGTTTGGACTTG+AGG | 0.460278 | 3.1:-54659343 | MS.gene008294:CDS |
| GGCTTATGGTTTCCAGAGAA+TGG | 0.461165 | 3.1:+54656729 | None:intergenic |
| CCTCTTGGTTGGCCAGTTGG+TGG | 0.462411 | 3.1:-54658264 | MS.gene008294:CDS |
| AAATCATCGCCGAATACATA+TGG | 0.465828 | 3.1:-54660084 | MS.gene008294:intron |
| AGCTGCATGTCTCTTGTTGG+TGG | 0.467488 | 3.1:+54658473 | None:intergenic |
| AATGGTGGTGTCTGCAATCA+TGG | 0.470051 | 3.1:+54656747 | None:intergenic |
| TCCAGCACAGGTCAAGCTCC+TGG | 0.473336 | 3.1:-54659135 | MS.gene008294:CDS |
| TTGCAGACACCACCATTCTC+TGG | 0.481231 | 3.1:-54656741 | MS.gene008294:CDS |
| TGGCCTCTTGGTTGGCCAGT+TGG | 0.482222 | 3.1:-54658267 | MS.gene008294:CDS |
| AACTATGATGGTTCCAGCAC+AGG | 0.485647 | 3.1:-54659147 | MS.gene008294:CDS |
| GGTACTTCAGCAACAACATC+AGG | 0.488296 | 3.1:+54658432 | None:intergenic |
| TTATTTGCTTACCCATAAGA+AGG | 0.490705 | 3.1:+54657050 | None:intergenic |
| TTCCACTTGGGAAGCTGTGA+AGG | 0.498232 | 3.1:+54659168 | None:intergenic |
| GATCCTTGAAAATGGCTTGT+GGG | 0.500897 | 3.1:+54658969 | None:intergenic |
| ACATCAATTGGCCTCTTGGT+TGG | 0.505676 | 3.1:-54658275 | MS.gene008294:CDS |
| GCACCAGCACCACAATAGTA+TGG | 0.514601 | 3.1:+54657971 | None:intergenic |
| GGAAGGGACACAGAGAAAGC+AGG | 0.514679 | 3.1:-54656829 | MS.gene008294:CDS |
| ATCAACATCAGTGGAATCAA+TGG | 0.515689 | 3.1:-54657887 | MS.gene008294:CDS |
| CTTCCCAAGTGGAACTATGA+TGG | 0.516245 | 3.1:-54659159 | MS.gene008294:CDS |
| GGAAAGGTTATTTCGAGGAT+AGG | 0.519246 | 3.1:-54656807 | MS.gene008294:CDS |
| CACATTGCTGCTTATGGAGA+AGG | 0.521068 | 3.1:-54657120 | MS.gene008294:CDS |
| TACAAAGCCTGTCTTTATGC+CGG | 0.521155 | 3.1:-54657911 | MS.gene008294:CDS |
| ACCAAGTCTATGAGAGAAGA+TGG | 0.523810 | 3.1:-54657198 | MS.gene008294:CDS |
| TTTCAAGGATCCATTTAGAA+GGG | 0.527758 | 3.1:-54658957 | MS.gene008294:CDS |
| GTTGATGCCGGCATAAAGAC+AGG | 0.529739 | 3.1:+54657904 | None:intergenic |
| GGACCATACTATTGTGGTGC+TGG | 0.534606 | 3.1:-54657974 | MS.gene008294:CDS |
| TATGGATCCATGTTAGATGA+TGG | 0.538723 | 3.1:+54656781 | None:intergenic |
| GCTGCATGTCTCTTGTTGGT+GGG | 0.539293 | 3.1:+54658474 | None:intergenic |
| GGTCCAGGAAAACCACCAAC+TGG | 0.540153 | 3.1:+54658252 | None:intergenic |
| TTCCAAGTTGGTCCCTCAGT+TGG | 0.551503 | 3.1:-54657715 | MS.gene008294:CDS |
| CGTGGTGCGTCGATTAGAGT+TGG | 0.552602 | 3.1:-54656850 | MS.gene008294:CDS |
| ATAACTTCACTATCTTCTCC+AGG | 0.553474 | 3.1:+54659117 | None:intergenic |
| GATCACTGAGGTTGCTGGTG+TGG | 0.554625 | 3.1:-54657510 | MS.gene008294:CDS |
| GATTCCACTGATGTTGATGC+CGG | 0.555187 | 3.1:+54657892 | None:intergenic |
| AGCAGGGAAAGGTTATTTCG+AGG | 0.555891 | 3.1:-54656812 | MS.gene008294:CDS |
| AAGGTTATTTCGAGGATAGG+AGG | 0.561130 | 3.1:-54656804 | MS.gene008294:CDS |
| GGATCCTTGAAAATGGCTTG+TGG | 0.562735 | 3.1:+54658968 | None:intergenic |
| TGGACTTGAGGAGCAAAGCA+AGG | 0.567464 | 3.1:-54659331 | MS.gene008294:CDS |
| ACCATCTTCTCTCATAGACT+TGG | 0.571470 | 3.1:+54657197 | None:intergenic |
| GGAACCATCATAGTTCCACT+TGG | 0.572427 | 3.1:+54659155 | None:intergenic |
| ATTGATGTCTTTCTGCAACA+AGG | 0.574318 | 3.1:+54658290 | None:intergenic |
| TTGTGGTGCTGGTGCTGACA+AGG | 0.575827 | 3.1:-54657963 | MS.gene008294:CDS |
| TTGCTCCAACTTACTTGACC+AGG | 0.576512 | 3.1:+54657854 | None:intergenic |
| TACCAACTGAGGGACCAACT+TGG | 0.582203 | 3.1:+54657713 | None:intergenic |
| GTGCGTCGATTAGAGTTGGA+AGG | 0.584013 | 3.1:-54656846 | MS.gene008294:CDS |
| ATGTAGTGGGAATTCCAAGT+TGG | 0.586154 | 3.1:-54657727 | MS.gene008294:intron |
| TAGGGTGATTGGAATGGTGC+TGG | 0.586935 | 3.1:-54657329 | MS.gene008294:CDS |
| TGTGATGCGTACACTCCAGC+TGG | 0.588646 | 3.1:-54658507 | MS.gene008294:CDS |
| TTCAAGGATCCATTTAGAAG+GGG | 0.590326 | 3.1:-54658956 | MS.gene008294:CDS |
| ATCAATGGTGAAGTGATGCC+TGG | 0.592881 | 3.1:-54657872 | MS.gene008294:CDS |
| TCCACTTGGGAAGCTGTGAA+GGG | 0.596916 | 3.1:+54659169 | None:intergenic |
| GACACAGAGAAAGCAGGGAA+AGG | 0.598045 | 3.1:-54656823 | MS.gene008294:CDS |
| GAAGGGTCAGTAACTGGACC+TGG | 0.599215 | 3.1:+54659186 | None:intergenic |
| CAATAGGGACCATACTATTG+TGG | 0.601480 | 3.1:-54657980 | MS.gene008294:intron |
| ACCCTTCACAGCTTCCCAAG+TGG | 0.605168 | 3.1:-54659170 | MS.gene008294:CDS |
| GGACTTGAGGAGCAAAGCAA+GGG | 0.609551 | 3.1:-54659330 | MS.gene008294:intron |
| CAACTCTAATCGACGCACCA+CGG | 0.611739 | 3.1:+54656851 | None:intergenic |
| CAAGGTTGATAAGATCTGAA+AGG | 0.614499 | 3.1:+54660128 | None:intergenic |
| TAGGAGGCCATCATCTAACA+TGG | 0.627480 | 3.1:-54656788 | MS.gene008294:CDS |
| GAAGGGACACAGAGAAAGCA+GGG | 0.638354 | 3.1:-54656828 | MS.gene008294:CDS |
| CAAAACTAGGGTGATTGGAA+TGG | 0.644331 | 3.1:-54657335 | MS.gene008294:intron |
| TGCGTCGATTAGAGTTGGAA+GGG | 0.644595 | 3.1:-54656845 | MS.gene008294:CDS |
| GAACCATCATAGTTCCACTT+GGG | 0.652093 | 3.1:+54659156 | None:intergenic |
| TTGAAGGGTGTTGCAAACCG+TGG | 0.663350 | 3.1:-54656868 | MS.gene008294:intron |
| TTATGGTTTCCAGAGAATGG+TGG | 0.667248 | 3.1:+54656732 | None:intergenic |
| ACCAGCAGAGATACCAACTG+AGG | 0.670459 | 3.1:+54657702 | None:intergenic |
| CCACCAACTGGCCAACCAAG+AGG | 0.671238 | 3.1:+54658264 | None:intergenic |
| TATGCCGGCATCAACATCAG+TGG | 0.676060 | 3.1:-54657896 | MS.gene008294:CDS |
| CTTCAGCAACAACATCAGGA+TGG | 0.677550 | 3.1:+54658436 | None:intergenic |
| CCAGCAGAGATACCAACTGA+GGG | 0.678315 | 3.1:+54657703 | None:intergenic |
| AATGTGAGTCAACAATGTCA+CGG | 0.681181 | 3.1:+54657933 | None:intergenic |
| GCAACGAGCGTAGATTGACA+GGG | 0.702514 | 3.1:-54657098 | MS.gene008294:CDS |
| ATGTTGTTGCTGAAGTACCA+TGG | 0.706598 | 3.1:-54658428 | MS.gene008294:intron |
| GAAGCTTGGGAAGAAGCACA+AGG | 0.711059 | 3.1:-54657145 | MS.gene008294:CDS |
| AAGTCTATGAGAGAAGATGG+TGG | 0.739470 | 3.1:-54657195 | MS.gene008294:CDS |
| GTTCCAATAGAGGATCACTG+AGG | 0.789699 | 3.1:-54657522 | MS.gene008294:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATATATACATAATTA+AGG | + | chr3.1:54657823-54657842 | None:intergenic | 10.0% |
| !! | ATGAATAAAAAAAATAATCA+TGG | + | chr3.1:54657003-54657022 | None:intergenic | 10.0% |
| !!! | ATTATGATTTTTACTTATTT+GGG | - | chr3.1:54657860-54657879 | MS.gene008294:intron | 10.0% |
| !!! | TATTATGATTTTTACTTATT+TGG | - | chr3.1:54657859-54657878 | MS.gene008294:intron | 10.0% |
| !! | ATAACATAAAACTATTTGTT+AGG | + | chr3.1:54658769-54658788 | None:intergenic | 15.0% |
| !! | ATGAACATAAATTAATCAAA+AGG | + | chr3.1:54657492-54657511 | None:intergenic | 15.0% |
| !! | GTAGTAAATAATAATGATAA+AGG | + | chr3.1:54659058-54659077 | None:intergenic | 15.0% |
| !! | TGAACATAAATTAATCAAAA+GGG | + | chr3.1:54657491-54657510 | None:intergenic | 15.0% |
| !!! | AAAATATAAATGGCTTTTTT+TGG | - | chr3.1:54657647-54657666 | MS.gene008294:intron | 15.0% |
| !!! | AAATATAAATGGCTTTTTTT+GGG | - | chr3.1:54657648-54657667 | MS.gene008294:intron | 15.0% |
| !!! | ATAGATTTTTAAGTTGATTT+TGG | - | chr3.1:54657136-54657155 | MS.gene008294:CDS | 15.0% |
| !!! | ATTTTATAATTTGCTCAATA+GGG | - | chr3.1:54658873-54658892 | MS.gene008294:intron | 15.0% |
| !!! | ATTTTTTTTATGCAAAACTA+GGG | - | chr3.1:54659521-54659540 | MS.gene008294:intron | 15.0% |
| !!! | CTATAGTTGAATATTTTATA+TGG | - | chr3.1:54659611-54659630 | MS.gene008294:intron | 15.0% |
| !!! | TAGATTTTTAAGTTGATTTT+GGG | - | chr3.1:54657137-54657156 | MS.gene008294:CDS | 15.0% |
| !!! | TAGTAATTTTGATACATTTA+AGG | + | chr3.1:54658026-54658045 | None:intergenic | 15.0% |
| !!! | TATTGTTTTTTTAATGTAGT+GGG | - | chr3.1:54659128-54659147 | MS.gene008294:CDS | 15.0% |
| !!! | TATTTTATAATTTGCTCAAT+AGG | - | chr3.1:54658872-54658891 | MS.gene008294:intron | 15.0% |
| !!! | TATTTTTTTTATGCAAAACT+AGG | - | chr3.1:54659520-54659539 | MS.gene008294:intron | 15.0% |
| !!! | TTATGATTTTTACTTATTTG+GGG | - | chr3.1:54657861-54657880 | MS.gene008294:intron | 15.0% |
| !!! | TTTTTTGTTTGGAATAAAAT+TGG | - | chr3.1:54657282-54657301 | MS.gene008294:intron | 15.0% |
| !! | AACAAAGAAAATTAGTTAGT+TGG | + | chr3.1:54659323-54659342 | None:intergenic | 20.0% |
| !! | AAGAATTTAATATCATGGTT+TGG | + | chr3.1:54657425-54657444 | None:intergenic | 20.0% |
| !! | ATATAGACAAGTATATCAAT+TGG | + | chr3.1:54659481-54659500 | None:intergenic | 20.0% |
| !! | GAACATAAATTAATCAAAAG+GGG | + | chr3.1:54657490-54657509 | None:intergenic | 20.0% |
| !! | GAGTTTAATTAAAAACAAGA+GGG | + | chr3.1:54658333-54658352 | None:intergenic | 20.0% |
| !! | TAATTTATGTTCATTATGTC+AGG | - | chr3.1:54657498-54657517 | MS.gene008294:CDS | 20.0% |
| !! | TACACAATCATATAAGAAAA+TGG | - | chr3.1:54658702-54658721 | MS.gene008294:intron | 20.0% |
| !! | TATAGACAAGTATATCAATT+GGG | + | chr3.1:54659480-54659499 | None:intergenic | 20.0% |
| !! | TGAGTTTAATTAAAAACAAG+AGG | + | chr3.1:54658334-54658353 | None:intergenic | 20.0% |
| !!! | AATGACTTTGTTTTTTTGTT+TGG | - | chr3.1:54657271-54657290 | MS.gene008294:intron | 20.0% |
| !!! | ATAAAACTATTTGTTAGGTA+AGG | + | chr3.1:54658764-54658783 | None:intergenic | 20.0% |
| !!! | CTATTGTTTTTTTAATGTAG+TGG | - | chr3.1:54659127-54659146 | MS.gene008294:CDS | 20.0% |
| !!! | TAAAACTATTTGTTAGGTAA+GGG | + | chr3.1:54658763-54658782 | None:intergenic | 20.0% |
| !!! | TATTTTGTTCTCTATTTTCT+TGG | - | chr3.1:54657835-54657854 | MS.gene008294:intron | 20.0% |
| !!! | TCTTGTTTTTAATTAAACTC+AGG | - | chr3.1:54658333-54658352 | MS.gene008294:intron | 20.0% |
| !!! | TTGAATATTTTATATGGTCA+TGG | - | chr3.1:54659617-54659636 | MS.gene008294:intron | 20.0% |
| ! | AAAAACAAATGTTACAGACT+AGG | + | chr3.1:54659945-54659964 | None:intergenic | 25.0% |
| ! | AAGTATATCAATTGGGTTAA+AGG | + | chr3.1:54659473-54659492 | None:intergenic | 25.0% |
| ! | AATAGGTCAAAATCAAAAAG+AGG | + | chr3.1:54659276-54659295 | None:intergenic | 25.0% |
| ! | AGAACAGAAAAAATCATCAT+GGG | + | chr3.1:54657199-54657218 | None:intergenic | 25.0% |
| ! | AGAATAACTTGATTCAAACA+AGG | + | chr3.1:54659428-54659447 | None:intergenic | 25.0% |
| ! | AGAATCTAACCATATGTATT+CGG | + | chr3.1:54656796-54656815 | None:intergenic | 25.0% |
| ! | CGTACAAGAATTTAATATCA+TGG | + | chr3.1:54657430-54657449 | None:intergenic | 25.0% |
| ! | GAATAACTTGATTCAAACAA+GGG | + | chr3.1:54659427-54659446 | None:intergenic | 25.0% |
| ! | TCTCATATTATTACCACTAA+TGG | + | chr3.1:54658733-54658752 | None:intergenic | 25.0% |
| ! | TTGTCTCTTGTTAATTAGTT+TGG | - | chr3.1:54658091-54658110 | MS.gene008294:intron | 25.0% |
| !! | TTGTTGTATGATTTGTGATT+AGG | - | chr3.1:54658533-54658552 | MS.gene008294:intron | 25.0% |
| !!! | GATGTTTTGTTCTGTTTTTT+AGG | - | chr3.1:54657167-54657186 | MS.gene008294:CDS | 25.0% |
| !!! | GGTGAATTTTTTTTTGTCAT+TGG | - | chr3.1:54658827-54658846 | MS.gene008294:intron | 25.0% |
| !!! | TTTAATATCATGGTTTGGTT+TGG | + | chr3.1:54657420-54657439 | None:intergenic | 25.0% |
| !!! | TTTGATTTTGACCTATTGAA+TGG | - | chr3.1:54659279-54659298 | MS.gene008294:intron | 25.0% |
| AAAGGTTAAAATGAGTGCAT+AGG | + | chr3.1:54659040-54659059 | None:intergenic | 30.0% | |
| AACACTAACTTCCATTCAAT+AGG | + | chr3.1:54659293-54659312 | None:intergenic | 30.0% | |
| AAGAGAGAGAAAATAATCAC+TGG | + | chr3.1:54657064-54657083 | None:intergenic | 30.0% | |
| AGAATAAACAAGTGGCAAAA+AGG | + | chr3.1:54658499-54658518 | None:intergenic | 30.0% | |
| AGTAGCAAAAAAAGATACCA+TGG | + | chr3.1:54658460-54658479 | None:intergenic | 30.0% | |
| ATACATTTAAGGACTAACGA+CGG | + | chr3.1:54658015-54658034 | None:intergenic | 30.0% | |
| ATACGTAGTAGACTTGAAAT+CGG | + | chr3.1:54659897-54659916 | None:intergenic | 30.0% | |
| ATATTGTTACCCCTTCTAAA+TGG | + | chr3.1:54657924-54657943 | None:intergenic | 30.0% | |
| ATCAGAACAGAATAAACAAG+TGG | + | chr3.1:54658507-54658526 | None:intergenic | 30.0% | |
| ATCATGGAAGTAACAACATA+TGG | + | chr3.1:54660108-54660127 | None:intergenic | 30.0% | |
| CAGAACAGAAAAAATCATCA+TGG | + | chr3.1:54657200-54657219 | None:intergenic | 30.0% | |
| CAGATGATTCAATATACAAC+AGG | + | chr3.1:54658249-54658268 | None:intergenic | 30.0% | |
| GAAAATTAGTTAGTTGGAGA+AGG | + | chr3.1:54659317-54659336 | None:intergenic | 30.0% | |
| TATGTTCATTATGTCAGGAT+TGG | - | chr3.1:54657503-54657522 | MS.gene008294:CDS | 30.0% | |
| TCTAAATGGATCCTTGAAAA+TGG | + | chr3.1:54657910-54657929 | None:intergenic | 30.0% | |
| TGACATTAACACCTTCTTAT+GGG | - | chr3.1:54659807-54659826 | MS.gene008294:intron | 30.0% | |
| TGGAAATAGCAAACCTTAAT+TGG | + | chr3.1:54659404-54659423 | None:intergenic | 30.0% | |
| TTATTTGCTTACCCATAAGA+AGG | + | chr3.1:54659821-54659840 | None:intergenic | 30.0% | |
| TTGGTATTGTACTTACTTAG+TGG | + | chr3.1:54657396-54657415 | None:intergenic | 30.0% | |
| TTTCAAGGATCCATTTAGAA+GGG | - | chr3.1:54657911-54657930 | MS.gene008294:CDS | 30.0% | |
| ! | ATGATTCTAGAAAAACGTTG+CGG | + | chr3.1:54656965-54656984 | None:intergenic | 30.0% |
| ! | ATTTCAAGTCTACTACGTAT+GGG | - | chr3.1:54659897-54659916 | MS.gene008294:intron | 30.0% |
| ! | CTTTGTTTATGTTCCAATAG+AGG | - | chr3.1:54659336-54659355 | MS.gene008294:CDS | 30.0% |
| ! | GTATGATTTGTGATTAGGTA+TGG | - | chr3.1:54658538-54658557 | MS.gene008294:intron | 30.0% |
| ! | TCAAAATCAAAAAGAGGTGT+TGG | + | chr3.1:54659270-54659289 | None:intergenic | 30.0% |
| !! | GATTTTTACTTATTTGGGGT+TGG | - | chr3.1:54657865-54657884 | MS.gene008294:intron | 30.0% |
| !! | TAGCAAACCTTAATTGGTTT+TGG | + | chr3.1:54659398-54659417 | None:intergenic | 30.0% |
| !! | TTTTCAAGGATCCATTTAGA+AGG | - | chr3.1:54657910-54657929 | MS.gene008294:CDS | 30.0% |
| !!! | AGCAAACCTTAATTGGTTTT+GGG | + | chr3.1:54659397-54659416 | None:intergenic | 30.0% |
| !!! | TAAGTTGATTTTGGGATATG+AGG | - | chr3.1:54657145-54657164 | MS.gene008294:CDS | 30.0% |
| !!! | TGTTTTTTGATGGTTGAGTA+TGG | - | chr3.1:54657224-54657243 | MS.gene008294:intron | 30.0% |
| AAATCATCGCCGAATACATA+TGG | - | chr3.1:54656784-54656803 | MS.gene008294:CDS | 35.0% | |
| AATGTGAGTCAACAATGTCA+CGG | + | chr3.1:54658938-54658957 | None:intergenic | 35.0% | |
| ATAACTTCACTATCTTCTCC+AGG | + | chr3.1:54657754-54657773 | None:intergenic | 35.0% | |
| ATCAACATCAGTGGAATCAA+TGG | - | chr3.1:54658981-54659000 | MS.gene008294:intron | 35.0% | |
| ATCAATTGGGTTAAAGGAGT+TGG | + | chr3.1:54659467-54659486 | None:intergenic | 35.0% | |
| ATTGATGTCTTTCTGCAACA+AGG | + | chr3.1:54658581-54658600 | None:intergenic | 35.0% | |
| CCAAAAGACAAGTTCAAACT+TGG | + | chr3.1:54658809-54658828 | None:intergenic | 35.0% | |
| CTGACATTAACACCTTCTTA+TGG | - | chr3.1:54659806-54659825 | MS.gene008294:intron | 35.0% | |
| CTTTGACCCAAAACCAATTA+AGG | - | chr3.1:54659388-54659407 | MS.gene008294:intron | 35.0% | |
| GTGTGTCTTGGAAAACATAT+TGG | + | chr3.1:54658121-54658140 | None:intergenic | 35.0% | |
| TAACTTGATTCAAACAAGGG+TGG | + | chr3.1:54659424-54659443 | None:intergenic | 35.0% | |
| TAGAAGGGGTAACAATATCT+TGG | - | chr3.1:54657926-54657945 | MS.gene008294:CDS | 35.0% | |
| TATGGATCCATGTTAGATGA+TGG | + | chr3.1:54660090-54660109 | None:intergenic | 35.0% | |
| TGAAAGCAATTGAGAAGCTT+GGG | - | chr3.1:54659710-54659729 | MS.gene008294:intron | 35.0% | |
| TGTTGCAGAAAGACATCAAT+TGG | - | chr3.1:54658581-54658600 | MS.gene008294:intron | 35.0% | |
| TTATGCAAAACTAGGGTGAT+TGG | - | chr3.1:54659528-54659547 | MS.gene008294:intron | 35.0% | |
| TTCAAGGATCCATTTAGAAG+GGG | - | chr3.1:54657912-54657931 | MS.gene008294:CDS | 35.0% | |
| TTGAAAGCAATTGAGAAGCT+TGG | - | chr3.1:54659709-54659728 | MS.gene008294:intron | 35.0% | |
| ! | AGTAGAGTTTTTCGTACGTA+CGG | + | chr3.1:54656897-54656916 | None:intergenic | 35.0% |
| ! | CCAAGTTTGAACTTGTCTTT+TGG | - | chr3.1:54658806-54658825 | MS.gene008294:intron | 35.0% |
| ! | GATTTCAAGTCTACTACGTA+TGG | - | chr3.1:54659896-54659915 | MS.gene008294:intron | 35.0% |
| ! | TTTCAAGTCTACTACGTATG+GGG | - | chr3.1:54659898-54659917 | MS.gene008294:intron | 35.0% |
| !! | CAAGGTTGATAAGATCTGAA+AGG | + | chr3.1:54656743-54656762 | None:intergenic | 35.0% |
| !! | CTTGGTGCTACAGTATTATA+AGG | + | chr3.1:54659656-54659675 | None:intergenic | 35.0% |
| !! | TATCATGGTTTGGTTTGGTT+TGG | + | chr3.1:54657415-54657434 | None:intergenic | 35.0% |
| !! | TGTGGCTTGTGTTATTTGAA+GGG | - | chr3.1:54659985-54660004 | MS.gene008294:intron | 35.0% |
| !!! | CTTAATTGGTTTTGGGTCAA+AGG | + | chr3.1:54659390-54659409 | None:intergenic | 35.0% |
| !!! | GTTCTGACTCTGTTTTTTGA+TGG | - | chr3.1:54657214-54657233 | MS.gene008294:intron | 35.0% |
| AAACATCATCGAGTGTGTCT+TGG | + | chr3.1:54658133-54658152 | None:intergenic | 40.0% | |
| AAGTCTATGAGAGAAGATGG+TGG | - | chr3.1:54659673-54659692 | MS.gene008294:intron | 40.0% | |
| ACCAAGTCTATGAGAGAAGA+TGG | - | chr3.1:54659670-54659689 | MS.gene008294:intron | 40.0% | |
| ACCATCTTCTCTCATAGACT+TGG | + | chr3.1:54659674-54659693 | None:intergenic | 40.0% | |
| ATCAGGATGGCTGAAAATCT+TGG | + | chr3.1:54658422-54658441 | None:intergenic | 40.0% | |
| CAAAACTAGGGTGATTGGAA+TGG | - | chr3.1:54659533-54659552 | MS.gene008294:intron | 40.0% | |
| CAATAGGGACCATACTATTG+TGG | - | chr3.1:54658888-54658907 | MS.gene008294:intron | 40.0% | |
| GAAAATGGTGTGACCATTAG+TGG | - | chr3.1:54658717-54658736 | MS.gene008294:intron | 40.0% | |
| GAACCATCATAGTTCCACTT+GGG | + | chr3.1:54657715-54657734 | None:intergenic | 40.0% | |
| GTACTTACTTAGTGGTAGAC+TGG | + | chr3.1:54657388-54657407 | None:intergenic | 40.0% | |
| GTTCATTATGTCAGGATTGG+TGG | - | chr3.1:54657506-54657525 | MS.gene008294:CDS | 40.0% | |
| TACAAAGCCTGTCTTTATGC+CGG | - | chr3.1:54658957-54658976 | MS.gene008294:CDS | 40.0% | |
| TGTTGTTCTAATCGTTCGTG+TGG | - | chr3.1:54659967-54659986 | MS.gene008294:intron | 40.0% | |
| TTACTTAGTGGTAGACTGGT+AGG | + | chr3.1:54657384-54657403 | None:intergenic | 40.0% | |
| TTATGGTTTCCAGAGAATGG+TGG | + | chr3.1:54660139-54660158 | None:intergenic | 40.0% | |
| TTCTGATCCCTAAATGTGTG+AGG | + | chr3.1:54658193-54658212 | None:intergenic | 40.0% | |
| ! | AAAGACATCAATTGGCCTCT+TGG | - | chr3.1:54658589-54658608 | MS.gene008294:intron | 40.0% |
| ! | AAGGTTATTTCGAGGATAGG+AGG | - | chr3.1:54660064-54660083 | MS.gene008294:intron | 40.0% |
| ! | ATGGGTAGCTCGTTACATTT+TGG | - | chr3.1:54659197-54659216 | MS.gene008294:intron | 40.0% |
| ! | ATGTAGTGGGAATTCCAAGT+TGG | - | chr3.1:54659141-54659160 | MS.gene008294:CDS | 40.0% |
| ! | ATGTTGTTGCTGAAGTACCA+TGG | - | chr3.1:54658440-54658459 | MS.gene008294:CDS | 40.0% |
| ! | ATTCTAGAAAAACGTTGCGG+TGG | + | chr3.1:54656962-54656981 | None:intergenic | 40.0% |
| ! | GATCCTTGAAAATGGCTTGT+GGG | + | chr3.1:54657902-54657921 | None:intergenic | 40.0% |
| ! | GATGATTTTCTCGGTGGTTT+CGG | + | chr3.1:54656772-54656791 | None:intergenic | 40.0% |
| ! | GGAAAGGTTATTTCGAGGAT+AGG | - | chr3.1:54660061-54660080 | MS.gene008294:intron | 40.0% |
| ! | GTATTCGGCGATGATTTTCT+CGG | + | chr3.1:54656781-54656800 | None:intergenic | 40.0% |
| ! | TGAAAGTGAGTTTTCACCTG+AGG | + | chr3.1:54658640-54658659 | None:intergenic | 40.0% |
| !! | GTGTGGCTTGTGTTATTTGA+AGG | - | chr3.1:54659984-54660003 | MS.gene008294:intron | 40.0% |
| AACTATGATGGTTCCAGCAC+AGG | - | chr3.1:54657721-54657740 | MS.gene008294:CDS | 45.0% | |
| AGTGGTAGACTGGTAGGTTT+GGG | + | chr3.1:54657378-54657397 | None:intergenic | 45.0% | |
| ATCAATGGTGAAGTGATGCC+TGG | - | chr3.1:54658996-54659015 | MS.gene008294:intron | 45.0% | |
| ATGTGTGAGGCGTGTCAATA+TGG | + | chr3.1:54658180-54658199 | None:intergenic | 45.0% | |
| CAACCTCAGTGATCCTCTAT+TGG | + | chr3.1:54659352-54659371 | None:intergenic | 45.0% | |
| CTGGTGCTCACACAAATTAC+AGG | - | chr3.1:54659558-54659577 | MS.gene008294:intron | 45.0% | |
| CTTCAGCAACAACATCAGGA+TGG | + | chr3.1:54658435-54658454 | None:intergenic | 45.0% | |
| CTTCCCAAGTGGAACTATGA+TGG | - | chr3.1:54657709-54657728 | MS.gene008294:CDS | 45.0% | |
| GATTCCACTGATGTTGATGC+CGG | + | chr3.1:54658979-54658998 | None:intergenic | 45.0% | |
| GGAACCATCATAGTTCCACT+TGG | + | chr3.1:54657716-54657735 | None:intergenic | 45.0% | |
| GGATCCTTGAAAATGGCTTG+TGG | + | chr3.1:54657903-54657922 | None:intergenic | 45.0% | |
| GGTACTTCAGCAACAACATC+AGG | + | chr3.1:54658439-54658458 | None:intergenic | 45.0% | |
| GTTCCAATAGAGGATCACTG+AGG | - | chr3.1:54659346-54659365 | MS.gene008294:CDS | 45.0% | |
| TAGGAGGCCATCATCTAACA+TGG | - | chr3.1:54660080-54660099 | MS.gene008294:intron | 45.0% | |
| TAGTGGTAGACTGGTAGGTT+TGG | + | chr3.1:54657379-54657398 | None:intergenic | 45.0% | |
| TGACACGCCTCACACATTTA+GGG | - | chr3.1:54658183-54658202 | MS.gene008294:intron | 45.0% | |
| TGATGCCTGGTCAAGTAAGT+TGG | - | chr3.1:54659009-54659028 | MS.gene008294:intron | 45.0% | |
| TTGACACGCCTCACACATTT+AGG | - | chr3.1:54658182-54658201 | MS.gene008294:intron | 45.0% | |
| TTGCTCCAACTTACTTGACC+AGG | + | chr3.1:54659017-54659036 | None:intergenic | 45.0% | |
| ! | AAGGAGCACATTGCTGCTTA+TGG | - | chr3.1:54659742-54659761 | MS.gene008294:intron | 45.0% |
| ! | AATGGTGGTGTCTGCAATCA+TGG | + | chr3.1:54660124-54660143 | None:intergenic | 45.0% |
| ! | ACATCAATTGGCCTCTTGGT+TGG | - | chr3.1:54658593-54658612 | MS.gene008294:intron | 45.0% |
| ! | AGCAGGGAAAGGTTATTTCG+AGG | - | chr3.1:54660056-54660075 | MS.gene008294:intron | 45.0% |
| ! | ATGTCTCTTGTTGGTGGGAA+TGG | + | chr3.1:54658392-54658411 | None:intergenic | 45.0% |
| ! | CACATTGCTGCTTATGGAGA+AGG | - | chr3.1:54659748-54659767 | MS.gene008294:intron | 45.0% |
| ! | CTCTGCTGGTGATGAGATAT+GGG | - | chr3.1:54659179-54659198 | MS.gene008294:CDS | 45.0% |
| ! | GGTAGCTCGTTACATTTTGG+AGG | - | chr3.1:54659200-54659219 | MS.gene008294:intron | 45.0% |
| ! | TATGTCAGGATTGGTGGATC+TGG | - | chr3.1:54657512-54657531 | MS.gene008294:CDS | 45.0% |
| ! | TCTCTGCTGGTGATGAGATA+TGG | - | chr3.1:54659178-54659197 | MS.gene008294:CDS | 45.0% |
| ! | TGTCTCTTGTTGGTGGGAAT+GGG | + | chr3.1:54658391-54658410 | None:intergenic | 45.0% |
| !! | CGTTACATTTTGGAGGTAGG+TGG | - | chr3.1:54659207-54659226 | MS.gene008294:intron | 45.0% |
| !! | GCTCGTTACATTTTGGAGGT+AGG | - | chr3.1:54659204-54659223 | MS.gene008294:intron | 45.0% |
| !! | TACTACGTATGGGGTTAGTC+CGG | - | chr3.1:54659907-54659926 | MS.gene008294:intron | 45.0% |
| !! | TGCGTCGATTAGAGTTGGAA+GGG | - | chr3.1:54660023-54660042 | MS.gene008294:intron | 45.0% |
| !! | TAATTTATTGAAAATATAAA+TGG | - | chr3.1:54657637-54657656 | MS.gene008294:intron | 5.0% |
| ACCAGCAGAGATACCAACTG+AGG | + | chr3.1:54659169-54659188 | None:intergenic | 50.0% | |
| AGCTGCATGTCTCTTGTTGG+TGG | + | chr3.1:54658398-54658417 | None:intergenic | 50.0% | |
| AGCTGTGAAGGGTCAGTAAC+TGG | + | chr3.1:54657691-54657710 | None:intergenic | 50.0% | |
| CAACTCTAATCGACGCACCA+CGG | + | chr3.1:54660020-54660039 | None:intergenic | 50.0% | |
| CCAGCAGAGATACCAACTGA+GGG | + | chr3.1:54659168-54659187 | None:intergenic | 50.0% | |
| GAAGGGACACAGAGAAAGCA+GGG | - | chr3.1:54660040-54660059 | MS.gene008294:intron | 50.0% | |
| GACACAGAGAAAGCAGGGAA+AGG | - | chr3.1:54660045-54660064 | MS.gene008294:intron | 50.0% | |
| GCAACGAGCGTAGATTGACA+GGG | - | chr3.1:54659770-54659789 | MS.gene008294:intron | 50.0% | |
| GCACCAGCACCACAATAGTA+TGG | + | chr3.1:54658900-54658919 | None:intergenic | 50.0% | |
| GCTGCATGTCTCTTGTTGGT+GGG | + | chr3.1:54658397-54658416 | None:intergenic | 50.0% | |
| GGACCATACTATTGTGGTGC+TGG | - | chr3.1:54658894-54658913 | MS.gene008294:intron | 50.0% | |
| GGACTTGAGGAGCAAAGCAA+GGG | - | chr3.1:54657538-54657557 | MS.gene008294:intron | 50.0% | |
| GTTGATGCCGGCATAAAGAC+AGG | + | chr3.1:54658967-54658986 | None:intergenic | 50.0% | |
| TACCAACTGAGGGACCAACT+TGG | + | chr3.1:54659158-54659177 | None:intergenic | 50.0% | |
| TAGAGGATCACTGAGGTTGC+TGG | - | chr3.1:54659353-54659372 | MS.gene008294:intron | 50.0% | |
| TAGGGTGATTGGAATGGTGC+TGG | - | chr3.1:54659539-54659558 | MS.gene008294:intron | 50.0% | |
| TATGCCGGCATCAACATCAG+TGG | - | chr3.1:54658972-54658991 | MS.gene008294:CDS | 50.0% | |
| TCCACTTGGGAAGCTGTGAA+GGG | + | chr3.1:54657702-54657721 | None:intergenic | 50.0% | |
| TGGACTTGAGGAGCAAAGCA+AGG | - | chr3.1:54657537-54657556 | MS.gene008294:intron | 50.0% | |
| TTCCACTTGGGAAGCTGTGA+AGG | + | chr3.1:54657703-54657722 | None:intergenic | 50.0% | |
| TTGCAGACACCACCATTCTC+TGG | - | chr3.1:54660127-54660146 | MS.gene008294:CDS | 50.0% | |
| ! | CAGGATTGGTGGATCTGGTT+TGG | - | chr3.1:54657517-54657536 | MS.gene008294:intron | 50.0% |
| ! | GAAGCTTGGGAAGAAGCACA+AGG | - | chr3.1:54659723-54659742 | MS.gene008294:intron | 50.0% |
| ! | TGAGTTTTCACCTGAGGTCC+AGG | + | chr3.1:54658634-54658653 | None:intergenic | 50.0% |
| ! | TTCGGCGATGATTTTCTCGG+TGG | + | chr3.1:54656778-54656797 | None:intergenic | 50.0% |
| ! | TTTTCTCGGTGGTTTCGGAG+AGG | + | chr3.1:54656767-54656786 | None:intergenic | 50.0% |
| !! | CAGCCCACAAGCCATTTTCA+AGG | - | chr3.1:54657896-54657915 | MS.gene008294:CDS | 50.0% |
| !! | GTGCGTCGATTAGAGTTGGA+AGG | - | chr3.1:54660022-54660041 | MS.gene008294:intron | 50.0% |
| !! | GTGGATCTGGTTTGGACTTG+AGG | - | chr3.1:54657525-54657544 | MS.gene008294:intron | 50.0% |
| !! | TTCCAAGTTGGTCCCTCAGT+TGG | - | chr3.1:54659153-54659172 | MS.gene008294:CDS | 50.0% |
| !! | TTGAAGGGTGTTGCAAACCG+TGG | - | chr3.1:54660000-54660019 | MS.gene008294:intron | 50.0% |
| !! | TTTTGGGTGCAGACTCTACC+AGG | - | chr3.1:54657664-54657683 | MS.gene008294:intron | 50.0% |
| ACCCTTCACAGCTTCCCAAG+TGG | - | chr3.1:54657698-54657717 | MS.gene008294:CDS | 55.0% | |
| GAAGGGTCAGTAACTGGACC+TGG | + | chr3.1:54657685-54657704 | None:intergenic | 55.0% | |
| GACTAGGTCAAGTCCCCAAC+CGG | + | chr3.1:54659929-54659948 | None:intergenic | 55.0% | |
| GATCACTGAGGTTGCTGGTG+TGG | - | chr3.1:54659358-54659377 | MS.gene008294:intron | 55.0% | |
| GGAAGGGACACAGAGAAAGC+AGG | - | chr3.1:54660039-54660058 | MS.gene008294:intron | 55.0% | |
| GGCAACGAGCGTAGATTGAC+AGG | - | chr3.1:54659769-54659788 | MS.gene008294:intron | 55.0% | |
| GGCAGCTGCATGTCTCTTGT+TGG | + | chr3.1:54658401-54658420 | None:intergenic | 55.0% | |
| GGTCCAGGAAAACCACCAAC+TGG | + | chr3.1:54658619-54658638 | None:intergenic | 55.0% | |
| TGTGATGCGTACACTCCAGC+TGG | - | chr3.1:54658361-54658380 | MS.gene008294:intron | 55.0% | |
| ! | CCCTCAGTTGGTATCTCTGC+TGG | - | chr3.1:54659165-54659184 | MS.gene008294:CDS | 55.0% |
| ! | TGGTGGTTTTCCTGGACCTC+AGG | - | chr3.1:54658621-54658640 | MS.gene008294:intron | 55.0% |
| !! | ACGTATGGGGTTAGTCCGGT+TGG | - | chr3.1:54659911-54659930 | MS.gene008294:intron | 55.0% |
| !! | CGTATGGGGTTAGTCCGGTT+GGG | - | chr3.1:54659912-54659931 | MS.gene008294:intron | 55.0% |
| !! | CGTGGTGCGTCGATTAGAGT+TGG | - | chr3.1:54660018-54660037 | MS.gene008294:intron | 55.0% |
| !! | GCTGGTGCTGACAAGGCATT+TGG | - | chr3.1:54658912-54658931 | MS.gene008294:intron | 55.0% |
| !! | GTATGGGGTTAGTCCGGTTG+GGG | - | chr3.1:54659913-54659932 | MS.gene008294:intron | 55.0% |
| !! | TTGTGGTGCTGGTGCTGACA+AGG | - | chr3.1:54658905-54658924 | MS.gene008294:intron | 55.0% |
| !!! | TGGCCAGTTGGTGGTTTTCC+TGG | - | chr3.1:54658613-54658632 | MS.gene008294:intron | 55.0% |
| CCACCAACTGGCCAACCAAG+AGG | + | chr3.1:54658607-54658626 | None:intergenic | 60.0% | |
| CGGTGGTTTCGGAGAGGTCA+AGG | + | chr3.1:54656761-54656780 | None:intergenic | 60.0% | |
| TCCAGCACAGGTCAAGCTCC+TGG | - | chr3.1:54657733-54657752 | MS.gene008294:intron | 60.0% | |
| TCCAGGAGCTTGACCTGTGC+TGG | + | chr3.1:54657737-54657756 | None:intergenic | 60.0% | |
| ! | CCTCTTGGTTGGCCAGTTGG+TGG | - | chr3.1:54658604-54658623 | MS.gene008294:intron | 60.0% |
| ! | GTGGGAATGGGTTCTCCAGC+TGG | + | chr3.1:54658379-54658398 | None:intergenic | 60.0% |
| ! | TGGCCTCTTGGTTGGCCAGT+TGG | - | chr3.1:54658601-54658620 | MS.gene008294:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 54656732 | 54660158 | 54656732 | ID=MS.gene008294 |
| chr3.1 | mRNA | 54656732 | 54660158 | 54656732 | ID=MS.gene008294.t1;Parent=MS.gene008294 |
| chr3.1 | exon | 54660085 | 54660158 | 54660085 | ID=MS.gene008294.t1.exon1;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54660085 | 54660158 | 54660085 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54659331 | 54659370 | 54659331 | ID=MS.gene008294.t1.exon2;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54659331 | 54659370 | 54659331 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54659111 | 54659214 | 54659111 | ID=MS.gene008294.t1.exon3;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54659111 | 54659214 | 54659111 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54658943 | 54658991 | 54658943 | ID=MS.gene008294.t1.exon4;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54658943 | 54658991 | 54658943 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54658429 | 54658535 | 54658429 | ID=MS.gene008294.t1.exon5;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54658429 | 54658535 | 54658429 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54658248 | 54658335 | 54658248 | ID=MS.gene008294.t1.exon6;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54658248 | 54658335 | 54658248 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54657868 | 54657996 | 54657868 | ID=MS.gene008294.t1.exon7;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54657868 | 54657996 | 54657868 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54657669 | 54657743 | 54657669 | ID=MS.gene008294.t1.exon8;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54657669 | 54657743 | 54657669 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54657481 | 54657534 | 54657481 | ID=MS.gene008294.t1.exon9;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54657481 | 54657534 | 54657481 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54657311 | 54657348 | 54657311 | ID=MS.gene008294.t1.exon10;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54657311 | 54657348 | 54657311 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54657062 | 54657221 | 54657062 | ID=MS.gene008294.t1.exon11;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54657062 | 54657221 | 54657062 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| chr3.1 | exon | 54656732 | 54656884 | 54656732 | ID=MS.gene008294.t1.exon12;Parent=MS.gene008294.t1 |
| chr3.1 | CDS | 54656732 | 54656884 | 54656732 | ID=cds.MS.gene008294.t1;Parent=MS.gene008294.t1 |
| Gene Sequence |
| Protein sequence |
