Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042906.t1 | Q43785.1 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 4.80E-211 | 743.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042906.t1 | Q43785 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 1.2e-213 | 743.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042906.t1 | O04998 | 98.9 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 5.9e-211 | 742.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04986 | MS.gene042906 | PPI |
| MS.gene042906 | MS.gene008294 | PPI |
| MS.gene042906 | MS.gene01810 | PPI |
| MS.gene042906 | MS.gene01811 | PPI |
| MS.gene042906 | MS.gene002836 | PPI |
| MS.gene042906 | MS.gene004521 | PPI |
| MS.gene00927 | MS.gene042906 | PPI |
| MS.gene042906 | MS.gene048690 | PPI |
| MS.gene004523 | MS.gene042906 | PPI |
| MS.gene042906 | MS.gene002835 | PPI |
| MS.gene042906 | MS.gene048734 | PPI |
| MS.gene042906 | MS.gene00925 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042906.t1 | MTR_6g071070 | 98.876 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 0.0 | 724 |
| MS.gene042906.t1 | MTR_3g065250 | 89.045 | 356 | 39 | 0 | 1 | 356 | 1 | 356 | 0.0 | 673 |
| MS.gene042906.t1 | MTR_5g077950 | 84.507 | 355 | 55 | 0 | 2 | 356 | 3 | 357 | 0.0 | 641 |
| MS.gene042906.t1 | MTR_2g021255 | 78.090 | 356 | 78 | 0 | 1 | 356 | 57 | 412 | 0.0 | 609 |
| MS.gene042906.t1 | MTR_2g021242 | 75.000 | 356 | 89 | 0 | 1 | 356 | 57 | 412 | 0.0 | 592 |
| MS.gene042906.t1 | MTR_2g021255 | 78.287 | 327 | 71 | 0 | 1 | 327 | 57 | 383 | 0.0 | 556 |
| MS.gene042906.t1 | MTR_8g062840 | 59.000 | 100 | 28 | 2 | 257 | 356 | 1 | 87 | 1.76e-29 | 110 |
| MS.gene042906.t1 | MTR_2g021248 | 42.657 | 143 | 31 | 4 | 214 | 355 | 7 | 99 | 3.50e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042906.t1 | AT1G66200 | 89.888 | 356 | 36 | 0 | 1 | 356 | 1 | 356 | 0.0 | 674 |
| MS.gene042906.t1 | AT5G37600 | 88.483 | 356 | 41 | 0 | 1 | 356 | 1 | 356 | 0.0 | 672 |
| MS.gene042906.t1 | AT1G66200 | 87.671 | 365 | 36 | 1 | 1 | 356 | 1 | 365 | 0.0 | 667 |
| MS.gene042906.t1 | AT3G17820 | 85.836 | 353 | 50 | 0 | 1 | 353 | 1 | 353 | 0.0 | 654 |
| MS.gene042906.t1 | AT5G16570 | 84.270 | 356 | 56 | 0 | 1 | 356 | 1 | 356 | 0.0 | 650 |
| MS.gene042906.t1 | AT1G48470 | 81.657 | 338 | 62 | 0 | 16 | 353 | 16 | 353 | 0.0 | 603 |
| MS.gene042906.t1 | AT5G35630 | 77.904 | 353 | 78 | 0 | 4 | 356 | 62 | 414 | 0.0 | 602 |
| MS.gene042906.t1 | AT5G35630 | 77.904 | 353 | 78 | 0 | 4 | 356 | 62 | 414 | 0.0 | 602 |
| MS.gene042906.t1 | AT5G35630 | 77.904 | 353 | 78 | 0 | 4 | 356 | 62 | 414 | 0.0 | 602 |
| MS.gene042906.t1 | AT1G66200 | 89.286 | 252 | 27 | 0 | 1 | 252 | 1 | 252 | 7.30e-171 | 476 |
| MS.gene042906.t1 | AT5G16570 | 80.833 | 240 | 46 | 0 | 1 | 240 | 1 | 240 | 2.42e-151 | 426 |
Find 98 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTGTTGCCTTGTCTAAA+TGG | 0.224649 | 6.1:+64333144 | None:intergenic |
| GATCCATCATAGTTCCATTT+AGG | 0.252717 | 6.1:+64333354 | None:intergenic |
| TTACCCTGGCTTTGCTTCTA+AGG | 0.260345 | 6.1:+64333531 | None:intergenic |
| TGGCCTATTGGTGGCTTTCC+AGG | 0.261567 | 6.1:-64332510 | MS.gene042906:CDS |
| TTTCTGCTGGAGATGAAATA+TGG | 0.262725 | 6.1:-64330963 | MS.gene042906:CDS |
| CAGAAGGCCTTCTTCTAATA+TGG | 0.269659 | 6.1:-64329289 | MS.gene042906:CDS |
| ATCAGGGTGACTGAAAATTT+TGG | 0.293766 | 6.1:+64332912 | None:intergenic |
| ACCCTGCAAAACTTCCTAAA+TGG | 0.295570 | 6.1:-64333368 | MS.gene042906:CDS |
| TTGAATAAACAGACTCTTCC+TGG | 0.301044 | 6.1:-64333402 | MS.gene042906:intron |
| TATTGCAGAAAGATACTAAT+TGG | 0.302912 | 6.1:-64332542 | MS.gene042906:CDS |
| GTTGGGAGTGGTTCACCAGC+TGG | 0.311962 | 6.1:+64332955 | None:intergenic |
| AAGGAGCACATTGCTGCTTA+TGG | 0.321020 | 6.1:-64330101 | MS.gene042906:CDS |
| CATTGTACCTCTTGTTTGTT+GGG | 0.325016 | 6.1:+64332938 | None:intergenic |
| GCACCAATCCCACAATAATA+TGG | 0.333506 | 6.1:+64332101 | None:intergenic |
| GACTTCATGGTTTCCATAGA+AGG | 0.338574 | 6.1:+64329229 | None:intergenic |
| TTGCTGAAACCACCCTTCTA+TGG | 0.342660 | 6.1:-64329242 | MS.gene042906:CDS |
| AAGGGCATTCTAACCGGAAT+TGG | 0.349045 | 6.1:+64330752 | None:intergenic |
| ATTCTAACCGGAATTGGCTT+AGG | 0.356734 | 6.1:+64330758 | None:intergenic |
| GCATTGTACCTCTTGTTTGT+TGG | 0.365960 | 6.1:+64332937 | None:intergenic |
| ATTGTTGTTACTAGGGTGAT+TGG | 0.368030 | 6.1:-64330616 | MS.gene042906:intron |
| CCTTCTGTTGGTATTTCTGC+TGG | 0.371824 | 6.1:-64330976 | MS.gene042906:CDS |
| TATGCTGGCATTAACATTAG+TGG | 0.390340 | 6.1:-64332026 | MS.gene042906:CDS |
| TTGGGAGTGGTTCACCAGCT+GGG | 0.397770 | 6.1:+64332956 | None:intergenic |
| CAAACCGTGGTGCCTCAGTT+AGG | 0.400634 | 6.1:-64329356 | MS.gene042906:CDS |
| ATAAACAGGGTTGGTGGATC+TGG | 0.401271 | 6.1:-64333560 | MS.gene042906:intron |
| CGGAGGATTCTGAGAGATTG+AGG | 0.404950 | 6.1:+64334110 | None:intergenic |
| GGTACCTCAGCAGCAACATC+AGG | 0.435763 | 6.1:+64332895 | None:intergenic |
| AAAATTCATACTTGTGGTCC+TGG | 0.445805 | 6.1:+64332492 | None:intergenic |
| TACCTCTTGTTTGTTGGGAG+TGG | 0.446761 | 6.1:+64332943 | None:intergenic |
| AACAGGGTCCATATTATTGT+GGG | 0.450127 | 6.1:-64332109 | MS.gene042906:intron |
| CTTCCTAAATGGAACTATGA+TGG | 0.457898 | 6.1:-64333357 | MS.gene042906:CDS |
| TACCAACAGAAGGGCCAACT+TGG | 0.457942 | 6.1:+64330986 | None:intergenic |
| TACAAAGCTTGTCTTTATGC+TGG | 0.462426 | 6.1:-64332041 | MS.gene042906:CDS |
| CCACTAGGATGGCCTATTGG+TGG | 0.464713 | 6.1:-64332519 | MS.gene042906:CDS |
| ATTTGACCCTAAGCCAATTC+CGG | 0.465261 | 6.1:-64330765 | MS.gene042906:intron |
| GGTCCATATTATTGTGGGAT+TGG | 0.467497 | 6.1:-64332104 | MS.gene042906:CDS |
| AGATTATTGCTGAATACATA+TGG | 0.469751 | 6.1:-64334084 | MS.gene042906:intron |
| ATCAATGGAGAGGTTATGCC+TGG | 0.479715 | 6.1:-64332002 | MS.gene042906:CDS |
| TTCCAAGTTGGCCCTTCTGT+TGG | 0.480743 | 6.1:-64330988 | MS.gene042906:CDS |
| GGTCCTGGAAAGCCACCAAT+AGG | 0.482434 | 6.1:+64332507 | None:intergenic |
| GGAAATGAGAGACGTCTCAC+TGG | 0.484871 | 6.1:-64330074 | MS.gene042906:CDS |
| TGGCCACTAGGATGGCCTAT+TGG | 0.485125 | 6.1:-64332522 | MS.gene042906:CDS |
| AAACCGTGGTGCCTCAGTTA+GGG | 0.490188 | 6.1:-64329355 | MS.gene042906:CDS |
| AAAGCTTAGATTGAGGCATA+AGG | 0.491860 | 6.1:-64330120 | MS.gene042906:CDS |
| TTCTAACCGGAATTGGCTTA+GGG | 0.495438 | 6.1:+64330759 | None:intergenic |
| TGGACCTTAGAAGCAAAGCC+AGG | 0.496641 | 6.1:-64333535 | MS.gene042906:CDS |
| AAGGGTGGTTTCAGCAATCA+TGG | 0.497015 | 6.1:+64329248 | None:intergenic |
| CAGAGGATCACAGAGATAGC+TGG | 0.499269 | 6.1:-64330800 | MS.gene042906:CDS |
| GAACAGGGTCCATATTATTG+TGG | 0.501632 | 6.1:-64332110 | MS.gene042906:intron |
| GTTATTATAAACAGGGTTGG+TGG | 0.502339 | 6.1:-64333566 | MS.gene042906:intron |
| CAGGGTTGGTGGATCTGGTA+TGG | 0.504774 | 6.1:-64333555 | MS.gene042906:CDS |
| TTCTGCTGGAGATGAAATAT+GGG | 0.507050 | 6.1:-64330962 | MS.gene042906:CDS |
| TTCTAATATGGATCCCTATG+TGG | 0.513250 | 6.1:-64329277 | MS.gene042906:CDS |
| CACATTGCTGCTTATGGAGA+AGG | 0.524445 | 6.1:-64330095 | MS.gene042906:CDS |
| GCAGGGTCACTCACTGGACC+AGG | 0.525486 | 6.1:+64333384 | None:intergenic |
| TGGAGAGGTTATGCCTGGCC+AGG | 0.526189 | 6.1:-64331997 | MS.gene042906:intron |
| TAAAGAACTGACCCAAGAAA+AGG | 0.531510 | 6.1:+64330025 | None:intergenic |
| ATTAACATTAGTGGTATCAA+TGG | 0.532567 | 6.1:-64332017 | MS.gene042906:CDS |
| TGGGAGTGGTTCACCAGCTG+GGG | 0.539124 | 6.1:+64332957 | None:intergenic |
| ATACTAATTGGCCACTAGGA+TGG | 0.540230 | 6.1:-64332530 | MS.gene042906:CDS |
| TCAAGCACAAATCAAGCTCC+AGG | 0.541387 | 6.1:-64333333 | MS.gene042906:CDS |
| ATCATGGAAGTAACCACATA+GGG | 0.546488 | 6.1:+64329264 | None:intergenic |
| TGTGATGTTTACACCCCAGC+TGG | 0.552836 | 6.1:-64332970 | MS.gene042906:CDS |
| ATAACTTCACTATCTTGTCC+TGG | 0.553036 | 6.1:+64333315 | None:intergenic |
| ACAAAGTCAATGAGAGAGGA+TGG | 0.553563 | 6.1:-64330173 | MS.gene042906:CDS |
| CTGGTGCTCACACAAACTAT+AGG | 0.555909 | 6.1:-64330586 | MS.gene042906:intron |
| AAGGTTACTTTGAGGACAGA+AGG | 0.559707 | 6.1:-64329305 | MS.gene042906:CDS |
| TAGGGATCCATATTAGAAGA+AGG | 0.561293 | 6.1:+64329282 | None:intergenic |
| TCACCCTGATGTTGCTGCTG+AGG | 0.562513 | 6.1:-64332899 | MS.gene042906:CDS |
| ACTTCATGGTTTCCATAGAA+GGG | 0.562577 | 6.1:+64329230 | None:intergenic |
| CGTGGTGCCTCAGTTAGGGT+TGG | 0.568100 | 6.1:-64329351 | MS.gene042906:CDS |
| AAAGATACTAATTGGCCACT+AGG | 0.568445 | 6.1:-64332534 | MS.gene042906:CDS |
| TGTTACTAGGGTGATTGGAA+TGG | 0.570387 | 6.1:-64330611 | MS.gene042906:intron |
| GGATCCTTGAAAATAGCTTG+TGG | 0.575621 | 6.1:+64333165 | None:intergenic |
| ATTGGTGCTGATAAAGCATA+TGG | 0.577793 | 6.1:-64332086 | MS.gene042906:CDS |
| TAGGGTGATTGGAATGGAGC+TGG | 0.587168 | 6.1:-64330605 | MS.gene042906:CDS |
| CCATTGAAAAGCTTAGATTG+AGG | 0.596334 | 6.1:-64330127 | MS.gene042906:CDS |
| AGATGGCAAAGGTTACTTTG+AGG | 0.600333 | 6.1:-64329313 | MS.gene042906:CDS |
| TTGTAGTGGGAGTTCCAAGT+TGG | 0.601958 | 6.1:-64331000 | MS.gene042906:intron |
| TTCAAGGATCCATTTAGACA+AGG | 0.602322 | 6.1:-64333153 | MS.gene042906:CDS |
| ATGTTGCTGCTGAGGTACCA+TGG | 0.605031 | 6.1:-64332891 | MS.gene042906:intron |
| CCAGCAGAAATACCAACAGA+AGG | 0.605255 | 6.1:+64330976 | None:intergenic |
| AATCATGGAAGTAACCACAT+AGG | 0.611809 | 6.1:+64329263 | None:intergenic |
| GATCACAGAGATAGCTGGAG+TGG | 0.613338 | 6.1:-64330795 | MS.gene042906:CDS |
| GGCTGCTCGTTACATTCTAG+AGG | 0.619452 | 6.1:-64330941 | MS.gene042906:intron |
| CATTAGTGGTATCAATGGAG+AGG | 0.622524 | 6.1:-64332012 | MS.gene042906:CDS |
| AGGCTATGAAATCATCAAGA+AGG | 0.629772 | 6.1:-64330150 | MS.gene042906:CDS |
| TCATGGTTTCCATAGAAGGG+TGG | 0.631294 | 6.1:+64329233 | None:intergenic |
| CAGCACAAAGTCAATGAGAG+AGG | 0.636631 | 6.1:-64330177 | MS.gene042906:CDS |
| CAGCAGAAATACCAACAGAA+GGG | 0.642583 | 6.1:+64330977 | None:intergenic |
| AACCACTCCCAACAAACAAG+AGG | 0.646714 | 6.1:-64332945 | MS.gene042906:CDS |
| GGACCTTAGAAGCAAAGCCA+GGG | 0.664228 | 6.1:-64333534 | MS.gene042906:intron |
| GTACCTCAGCAGCAACATCA+GGG | 0.665566 | 6.1:+64332896 | None:intergenic |
| CAACCCTAACTGAGGCACCA+CGG | 0.665899 | 6.1:+64329352 | None:intergenic |
| GTCTCTTCCAACCCTAACTG+AGG | 0.685094 | 6.1:+64329344 | None:intergenic |
| AAGTCAATGAGAGAGGATGG+AGG | 0.709816 | 6.1:-64330170 | MS.gene042906:CDS |
| ATGTAGGGTGTGGCAAACCG+TGG | 0.713160 | 6.1:-64329369 | MS.gene042906:intron |
| CCACCAATAGGCCATCCTAG+TGG | 0.722635 | 6.1:+64332519 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTATATTATTATTACAG+AGG | - | chr6.1:64332552-64332571 | MS.gene042906:CDS | 10.0% |
| !! | TTTATATGTTATTATAAACA+GGG | - | chr6.1:64329796-64329815 | MS.gene042906:intron | 10.0% |
| !!! | AATTATTTTTACTAATTGTT+TGG | + | chr6.1:64333452-64333471 | None:intergenic | 10.0% |
| !!! | ATATTTTTTATTACTTTCTT+TGG | - | chr6.1:64332305-64332324 | MS.gene042906:intron | 10.0% |
| !!! | ATTCAAGAAATATTAATTTT+TGG | + | chr6.1:64330771-64330790 | None:intergenic | 10.0% |
| !!! | ATTCTTCTTTTTAAAAATTA+AGG | - | chr6.1:64333815-64333834 | MS.gene042906:intron | 10.0% |
| !!! | GTTATTACATTTTTTTTTTA+TGG | + | chr6.1:64329393-64329412 | None:intergenic | 10.0% |
| !!! | TCTTAATTTTTTAATTTGAA+GGG | - | chr6.1:64332478-64332497 | MS.gene042906:intron | 10.0% |
| !!! | TTCTTAATTTTTTAATTTGA+AGG | - | chr6.1:64332477-64332496 | MS.gene042906:intron | 10.0% |
| !!! | TTTTATATGTTATTATAAAC+AGG | - | chr6.1:64329795-64329814 | MS.gene042906:intron | 10.0% |
| !! | AATAATCAAAACAAACAAAA+AGG | + | chr6.1:64330171-64330190 | None:intergenic | 15.0% |
| !! | ATACTACATAATCTAAAAAA+GGG | + | chr6.1:64330573-64330592 | None:intergenic | 15.0% |
| !! | TAACAAACATTATAACATAT+TGG | - | chr6.1:64332806-64332825 | MS.gene042906:intron | 15.0% |
| !! | TAGAAAAATAGGAAAATAAA+AGG | + | chr6.1:64331155-64331174 | None:intergenic | 15.0% |
| !! | TATACTACATAATCTAAAAA+AGG | + | chr6.1:64330574-64330593 | None:intergenic | 15.0% |
| !!! | AACATTTTTATTGATATTCT+TGG | + | chr6.1:64332512-64332531 | None:intergenic | 15.0% |
| !!! | AATATACATTTTGATTAACT+AGG | + | chr6.1:64330332-64330351 | None:intergenic | 15.0% |
| !!! | AATTGAAATTTTTCTCATAT+TGG | - | chr6.1:64333468-64333487 | MS.gene042906:intron | 15.0% |
| !!! | ATATATATTTTGTTTTGAAC+AGG | - | chr6.1:64331243-64331262 | MS.gene042906:intron | 15.0% |
| !!! | ATTCTTGGTATATTTTAAAA+GGG | - | chr6.1:64329462-64329481 | MS.gene042906:intron | 15.0% |
| !!! | ATTTGTTAAAAACTTTTGTA+TGG | - | chr6.1:64332655-64332674 | MS.gene042906:intron | 15.0% |
| !!! | GTTACATTTTTTTTTTTCTA+TGG | + | chr6.1:64329415-64329434 | None:intergenic | 15.0% |
| !!! | TATATATTTTGTTTTGAACA+GGG | - | chr6.1:64331244-64331263 | MS.gene042906:intron | 15.0% |
| !!! | TCATTTTCTTATTATTTCAT+TGG | - | chr6.1:64333163-64333182 | MS.gene042906:CDS | 15.0% |
| !!! | TTTATTGTATAGTTTTCTTA+TGG | - | chr6.1:64329594-64329613 | MS.gene042906:intron | 15.0% |
| !!! | TTTATTTTCCTATTTTTCTA+AGG | - | chr6.1:64331155-64331174 | MS.gene042906:intron | 15.0% |
| !!! | TTTTTCAATTTTGACATAAT+TGG | - | chr6.1:64330265-64330284 | MS.gene042906:intron | 15.0% |
| !! | AGATAAAAGTCTTTAACTAT+TGG | - | chr6.1:64333386-64333405 | MS.gene042906:CDS | 20.0% |
| !! | ATACCAAATCCAAAATATTA+AGG | + | chr6.1:64333953-64333972 | None:intergenic | 20.0% |
| !! | ATATTACAAATAAACCATAG+AGG | + | chr6.1:64329657-64329676 | None:intergenic | 20.0% |
| !! | ATGTTATTCATTATGATTCT+TGG | - | chr6.1:64329447-64329466 | MS.gene042906:intron | 20.0% |
| !! | ATTTGTATTCATTCATTTAC+TGG | - | chr6.1:64329929-64329948 | MS.gene042906:intron | 20.0% |
| !! | CAAAACAAGATAAACATAAA+GGG | + | chr6.1:64330948-64330967 | None:intergenic | 20.0% |
| !! | CAAACAAACAAATATCAAAA+TGG | + | chr6.1:64332729-64332748 | None:intergenic | 20.0% |
| !! | CAATTCACATAATAACAAAT+TGG | + | chr6.1:64332145-64332164 | None:intergenic | 20.0% |
| !! | GAATTTGAAAGGATAATAAA+TGG | + | chr6.1:64330544-64330563 | None:intergenic | 20.0% |
| !! | GATCAATTATTACAATTTCA+AGG | - | chr6.1:64332246-64332265 | MS.gene042906:intron | 20.0% |
| !! | TAAAACCTAAGAATCAAAAT+AGG | + | chr6.1:64330521-64330540 | None:intergenic | 20.0% |
| !! | TATTACAAATAAACCATAGA+GGG | + | chr6.1:64329656-64329675 | None:intergenic | 20.0% |
| !! | TATTTCTTGAATGTATTAAC+AGG | - | chr6.1:64330779-64330798 | MS.gene042906:CDS | 20.0% |
| !! | TTGATCTATATTATGTTATG+TGG | - | chr6.1:64329729-64329748 | MS.gene042906:intron | 20.0% |
| !! | TTTAATTGTATCAAAACCAA+GGG | + | chr6.1:64329633-64329652 | None:intergenic | 20.0% |
| !! | TTTGTGGAAAAAAAATATTC+AGG | - | chr6.1:64330371-64330390 | MS.gene042906:intron | 20.0% |
| !!! | AAACATTCTAGTCTTTAAAA+TGG | - | chr6.1:64332056-64332075 | MS.gene042906:CDS | 20.0% |
| !!! | AAATATTAAGGTATGTTTTG+AGG | + | chr6.1:64333941-64333960 | None:intergenic | 20.0% |
| !!! | AAATATTTTGATGTAATACC+TGG | + | chr6.1:64331393-64331412 | None:intergenic | 20.0% |
| !!! | AGATAAATTGTTCATTTTAG+AGG | - | chr6.1:64332001-64332020 | MS.gene042906:CDS | 20.0% |
| !!! | ATACCTTAATATTTTGGATT+TGG | - | chr6.1:64333947-64333966 | MS.gene042906:intron | 20.0% |
| !!! | ATTATATACCAATTTTGTAG+TGG | - | chr6.1:64332355-64332374 | MS.gene042906:intron | 20.0% |
| !!! | ATTCATTTACTGGTTTTTTT+TGG | - | chr6.1:64329939-64329958 | MS.gene042906:intron | 20.0% |
| !!! | ATTTGTTATTATGTGAATTG+TGG | - | chr6.1:64332145-64332164 | MS.gene042906:intron | 20.0% |
| !!! | CAAAACATACCTTAATATTT+TGG | - | chr6.1:64333941-64333960 | MS.gene042906:intron | 20.0% |
| !!! | GATTCTTGGTATATTTTAAA+AGG | - | chr6.1:64329461-64329480 | MS.gene042906:intron | 20.0% |
| !!! | GATTTTTCAATAACAAACTA+GGG | - | chr6.1:64333645-64333664 | MS.gene042906:intron | 20.0% |
| !!! | TGATTTTTCAATAACAAACT+AGG | - | chr6.1:64333644-64333663 | MS.gene042906:intron | 20.0% |
| !!! | TGGTTGAAAAATTGATAATT+GGG | + | chr6.1:64330978-64330997 | None:intergenic | 20.0% |
| !!! | TTATATACCAATTTTGTAGT+GGG | - | chr6.1:64332356-64332375 | MS.gene042906:intron | 20.0% |
| !!! | TTGGTTGAAAAATTGATAAT+TGG | + | chr6.1:64330979-64330998 | None:intergenic | 20.0% |
| ! | AAAAACATGCATCATAGATT+TGG | + | chr6.1:64330998-64331017 | None:intergenic | 25.0% |
| ! | AAAATCAAGAAGGAAAAAGA+AGG | + | chr6.1:64330920-64330939 | None:intergenic | 25.0% |
| ! | AAAGGAAAAATTCATACTTG+TGG | + | chr6.1:64330886-64330905 | None:intergenic | 25.0% |
| ! | ACTAAATAGTGGTTAAATAG+TGG | + | chr6.1:64332946-64332965 | None:intergenic | 25.0% |
| ! | AGATTATTGCTGAATACATA+TGG | - | chr6.1:64329285-64329304 | MS.gene042906:CDS | 25.0% |
| ! | AGCAAAAACTTAACAAATCA+TGG | + | chr6.1:64331536-64331555 | None:intergenic | 25.0% |
| ! | ATATAGATCAACCAAAGAAA+AGG | + | chr6.1:64329720-64329739 | None:intergenic | 25.0% |
| ! | ATGACAAATAATGTGTTACA+TGG | + | chr6.1:64330719-64330738 | None:intergenic | 25.0% |
| ! | ATTAACATTAGTGGTATCAA+TGG | - | chr6.1:64331352-64331371 | MS.gene042906:intron | 25.0% |
| ! | ATTTACTCAAATTTCGCTAT+GGG | + | chr6.1:64332878-64332897 | None:intergenic | 25.0% |
| ! | CAAAAGAACCTTAGAAAAAT+AGG | + | chr6.1:64331166-64331185 | None:intergenic | 25.0% |
| ! | CCAAAACAAGATAAACATAA+AGG | + | chr6.1:64330949-64330968 | None:intergenic | 25.0% |
| ! | CTAAACCTATGGTTTATTTA+TGG | - | chr6.1:64329549-64329568 | MS.gene042906:intron | 25.0% |
| ! | GGAAAATAAAAGGTTATGTA+CGG | + | chr6.1:64331145-64331164 | None:intergenic | 25.0% |
| ! | GTTATGTTTCATTGTATGTA+GGG | - | chr6.1:64333985-64334004 | MS.gene042906:intron | 25.0% |
| ! | GTTTAATTGTATCAAAACCA+AGG | + | chr6.1:64329634-64329653 | None:intergenic | 25.0% |
| ! | TAAATAAACCATAGGTTTAG+AGG | + | chr6.1:64329549-64329568 | None:intergenic | 25.0% |
| ! | TAAGTATTTGTCAAGAAAGT+AGG | - | chr6.1:64333412-64333431 | MS.gene042906:intron | 25.0% |
| ! | TATAGATCAACCAAAGAAAA+GGG | + | chr6.1:64329719-64329738 | None:intergenic | 25.0% |
| ! | TATGTTATTATAAACAGGGT+TGG | - | chr6.1:64329800-64329819 | MS.gene042906:intron | 25.0% |
| ! | TATTGATATTCTTGGTCATA+TGG | + | chr6.1:64332504-64332523 | None:intergenic | 25.0% |
| ! | TATTGCAGAAAGATACTAAT+TGG | - | chr6.1:64330827-64330846 | MS.gene042906:intron | 25.0% |
| ! | TGTTATGTTTCATTGTATGT+AGG | - | chr6.1:64333984-64334003 | MS.gene042906:intron | 25.0% |
| ! | TTAAGAAATAACAATTACCC+TGG | + | chr6.1:64329855-64329874 | None:intergenic | 25.0% |
| ! | TTGATCCATAAATAAACCAT+AGG | + | chr6.1:64329557-64329576 | None:intergenic | 25.0% |
| ! | TTTAACAAATGTTCACTTTG+TGG | - | chr6.1:64330355-64330374 | MS.gene042906:intron | 25.0% |
| !! | ATACATATGGTAAGGTTTTA+AGG | - | chr6.1:64329298-64329317 | MS.gene042906:CDS | 25.0% |
| !! | GTATTCAGCAATAATCTTTT+CGG | + | chr6.1:64329282-64329301 | None:intergenic | 25.0% |
| !! | TTGTTACATTGTTGTTACTA+GGG | - | chr6.1:64332746-64332765 | MS.gene042906:intron | 25.0% |
| !! | TTTGTTACATTGTTGTTACT+AGG | - | chr6.1:64332745-64332764 | MS.gene042906:intron | 25.0% |
| !!! | AAGGGTTTTAAGAATTTGAA+AGG | + | chr6.1:64330555-64330574 | None:intergenic | 25.0% |
| !!! | AATGATGGATTTTAGATATG+AGG | - | chr6.1:64333690-64333709 | MS.gene042906:intron | 25.0% |
| !!! | CCTTTATGTTTATCTTGTTT+TGG | - | chr6.1:64330946-64330965 | MS.gene042906:CDS | 25.0% |
| AACCTAAGAATCAAAATAGG+AGG | + | chr6.1:64330518-64330537 | None:intergenic | 30.0% | |
| AAGAATCAAAATAGGAGGTT+AGG | + | chr6.1:64330513-64330532 | None:intergenic | 30.0% | |
| AAGGGAACAAAAAATCAAGA+AGG | + | chr6.1:64330930-64330949 | None:intergenic | 30.0% | |
| ATATTGTTGCCTTGTCTAAA+TGG | + | chr6.1:64330228-64330247 | None:intergenic | 30.0% | |
| ATGAGCTATAGATGAAATCA+TGG | + | chr6.1:64331958-64331977 | None:intergenic | 30.0% | |
| ATTGCTGAATACATATGGTA+AGG | - | chr6.1:64329290-64329309 | MS.gene042906:CDS | 30.0% | |
| CACACAAAGATACTAAATAG+TGG | + | chr6.1:64332957-64332976 | None:intergenic | 30.0% | |
| CTTGAATGTATTAACAGGTA+TGG | - | chr6.1:64330784-64330803 | MS.gene042906:CDS | 30.0% | |
| GATTTACTCAAATTTCGCTA+TGG | + | chr6.1:64332879-64332898 | None:intergenic | 30.0% | |
| GTATCTTTGTGTGAAAATAG+TGG | - | chr6.1:64332964-64332983 | MS.gene042906:CDS | 30.0% | |
| TGATACAATTAAACCCTCTA+TGG | - | chr6.1:64329640-64329659 | MS.gene042906:intron | 30.0% | |
| ! | AGGATACTCTGTTTTATAAC+AGG | - | chr6.1:64329318-64329337 | MS.gene042906:CDS | 30.0% |
| ! | GATACTCTGTTTTATAACAG+GGG | - | chr6.1:64329320-64329339 | MS.gene042906:CDS | 30.0% |
| ! | GGATACTCTGTTTTATAACA+GGG | - | chr6.1:64329319-64329338 | MS.gene042906:CDS | 30.0% |
| ! | TGAGAAATATGTTGATAGAG+AGG | - | chr6.1:64332087-64332106 | MS.gene042906:CDS | 30.0% |
| !! | ATGTTTTTGTGCTAAGGAAA+TGG | - | chr6.1:64331010-64331029 | MS.gene042906:intron | 30.0% |
| !! | CTTTCTTTGGTTTGTATGTA+AGG | - | chr6.1:64332318-64332337 | MS.gene042906:intron | 30.0% |
| !!! | AACCTCCTATTTTGATTCTT+AGG | - | chr6.1:64330513-64330532 | MS.gene042906:intron | 30.0% |
| !!! | ACGTCCTCATATCTTTTTTT+TGG | + | chr6.1:64333795-64333814 | None:intergenic | 30.0% |
| !!! | CGTCCTCATATCTTTTTTTT+GGG | + | chr6.1:64333794-64333813 | None:intergenic | 30.0% |
| AAAATTCATACTTGTGGTCC+TGG | + | chr6.1:64330880-64330899 | None:intergenic | 35.0% | |
| AAAGATACTAATTGGCCACT+AGG | - | chr6.1:64330835-64330854 | MS.gene042906:intron | 35.0% | |
| AAAGCTTAGATTGAGGCATA+AGG | - | chr6.1:64333249-64333268 | MS.gene042906:intron | 35.0% | |
| AACAGGGTCCATATTATTGT+GGG | - | chr6.1:64331260-64331279 | MS.gene042906:intron | 35.0% | |
| AATCATGGAAGTAACCACAT+AGG | + | chr6.1:64334109-64334128 | None:intergenic | 35.0% | |
| ACGCATATTGCGAAAAATAG+TGG | + | chr6.1:64333105-64333124 | None:intergenic | 35.0% | |
| AGGTTAGGAAATACATACCA+TGG | + | chr6.1:64330498-64330517 | None:intergenic | 35.0% | |
| ATAACTTCACTATCTTGTCC+TGG | + | chr6.1:64330057-64330076 | None:intergenic | 35.0% | |
| ATCATGGAAGTAACCACATA+GGG | + | chr6.1:64334108-64334127 | None:intergenic | 35.0% | |
| CCATTGAAAAGCTTAGATTG+AGG | - | chr6.1:64333242-64333261 | MS.gene042906:intron | 35.0% | |
| CTTCCTAAATGGAACTATGA+TGG | - | chr6.1:64330012-64330031 | MS.gene042906:intron | 35.0% | |
| GATCCATCATAGTTCCATTT+AGG | + | chr6.1:64330018-64330037 | None:intergenic | 35.0% | |
| GTGCCCAAAAAAAAGATATG+AGG | - | chr6.1:64333788-64333807 | MS.gene042906:intron | 35.0% | |
| GTTATTATAAACAGGGTTGG+TGG | - | chr6.1:64329803-64329822 | MS.gene042906:intron | 35.0% | |
| GTTCAAATCAGTTGAAATCG+TGG | + | chr6.1:64333005-64333024 | None:intergenic | 35.0% | |
| TAAAGAACTGACCCAAGAAA+AGG | + | chr6.1:64333347-64333366 | None:intergenic | 35.0% | |
| TACAAAGCTTGTCTTTATGC+TGG | - | chr6.1:64331328-64331347 | MS.gene042906:intron | 35.0% | |
| TAGGGATCCATATTAGAAGA+AGG | + | chr6.1:64334090-64334109 | None:intergenic | 35.0% | |
| TATGCTGGCATTAACATTAG+TGG | - | chr6.1:64331343-64331362 | MS.gene042906:intron | 35.0% | |
| TCAATAACAAACTAGGGCTT+TGG | - | chr6.1:64333651-64333670 | MS.gene042906:intron | 35.0% | |
| TCAATGTTCCTCTAAACCTA+TGG | - | chr6.1:64329538-64329557 | MS.gene042906:intron | 35.0% | |
| TTCAAGGATCCATTTAGACA+AGG | - | chr6.1:64330216-64330235 | MS.gene042906:intron | 35.0% | |
| TTCTAATATGGATCCCTATG+TGG | - | chr6.1:64334092-64334111 | MS.gene042906:CDS | 35.0% | |
| TTCTGCTGGAGATGAAATAT+GGG | - | chr6.1:64332407-64332426 | MS.gene042906:intron | 35.0% | |
| TTGAATAAACAGACTCTTCC+TGG | - | chr6.1:64329967-64329986 | MS.gene042906:intron | 35.0% | |
| TTTCTGCTGGAGATGAAATA+TGG | - | chr6.1:64332406-64332425 | MS.gene042906:intron | 35.0% | |
| ! | AGACATCAACACCTTTTCTT+GGG | - | chr6.1:64333333-64333352 | MS.gene042906:CDS | 35.0% |
| ! | AGTCCTAAAACCCTTTTCTT+TGG | - | chr6.1:64329706-64329725 | MS.gene042906:intron | 35.0% |
| ! | ATCAGGGTGACTGAAAATTT+TGG | + | chr6.1:64330460-64330479 | None:intergenic | 35.0% |
| ! | ATTGTTGTTACTAGGGTGAT+TGG | - | chr6.1:64332753-64332772 | MS.gene042906:intron | 35.0% |
| ! | CAACCAAAGAAAAGGGTTTT+AGG | + | chr6.1:64329712-64329731 | None:intergenic | 35.0% |
| ! | CATTGTACCTCTTGTTTGTT+GGG | + | chr6.1:64330434-64330453 | None:intergenic | 35.0% |
| ! | CCTCAATCTAAGCTTTTCAA+TGG | + | chr6.1:64333245-64333264 | None:intergenic | 35.0% |
| ! | GTATCAAAACCAAGGGTTTT+AGG | + | chr6.1:64329626-64329645 | None:intergenic | 35.0% |
| ! | TCCATTTAGGAAGTTTTGCA+GGG | + | chr6.1:64330005-64330024 | None:intergenic | 35.0% |
| ! | TTCAGCAATAATCTTTTCGG+AGG | + | chr6.1:64329279-64329298 | None:intergenic | 35.0% |
| ! | TTCCATTTAGGAAGTTTTGC+AGG | + | chr6.1:64330006-64330025 | None:intergenic | 35.0% |
| !! | AAGAAGGCACTAAATGACAA+AGG | + | chr6.1:64330904-64330923 | None:intergenic | 35.0% |
| !! | AAGTCCACAAGCTATTTTCA+AGG | - | chr6.1:64330200-64330219 | MS.gene042906:intron | 35.0% |
| !! | ATTGGTGCTGATAAAGCATA+TGG | - | chr6.1:64331283-64331302 | MS.gene042906:intron | 35.0% |
| !! | GTTAAAAAGGGCATTCTAAC+CGG | + | chr6.1:64332626-64332645 | None:intergenic | 35.0% |
| !! | TGATGCATGTTTTTGTGCTA+AGG | - | chr6.1:64331004-64331023 | MS.gene042906:intron | 35.0% |
| ACAAAGTCAATGAGAGAGGA+TGG | - | chr6.1:64333196-64333215 | MS.gene042906:intron | 40.0% | |
| ACATCTTAATGCTCCTACTC+AGG | + | chr6.1:64333750-64333769 | None:intergenic | 40.0% | |
| ACCCTGCAAAACTTCCTAAA+TGG | - | chr6.1:64330001-64330020 | MS.gene042906:intron | 40.0% | |
| ACCTCTTAGGGTTTGAATGA+TGG | - | chr6.1:64333675-64333694 | MS.gene042906:intron | 40.0% | |
| ACGACAATGATCATTGACAC+TGG | - | chr6.1:64330620-64330639 | MS.gene042906:intron | 40.0% | |
| ATACTAATTGGCCACTAGGA+TGG | - | chr6.1:64330839-64330858 | MS.gene042906:intron | 40.0% | |
| ATTTGACCCTAAGCCAATTC+CGG | - | chr6.1:64332604-64332623 | MS.gene042906:intron | 40.0% | |
| CAGAAGGCCTTCTTCTAATA+TGG | - | chr6.1:64334080-64334099 | MS.gene042906:intron | 40.0% | |
| CAGCAGAAATACCAACAGAA+GGG | + | chr6.1:64332395-64332414 | None:intergenic | 40.0% | |
| CATTAGTGGTATCAATGGAG+AGG | - | chr6.1:64331357-64331376 | MS.gene042906:intron | 40.0% | |
| GAACAGGGTCCATATTATTG+TGG | - | chr6.1:64331259-64331278 | MS.gene042906:intron | 40.0% | |
| GACACAGAAAAAGATGGCAA+AGG | - | chr6.1:64334045-64334064 | MS.gene042906:intron | 40.0% | |
| GCACCAATCCCACAATAATA+TGG | + | chr6.1:64331271-64331290 | None:intergenic | 40.0% | |
| GGAAGAGACACAGAAAAAGA+TGG | - | chr6.1:64334039-64334058 | MS.gene042906:intron | 40.0% | |
| GGATCCTTGAAAATAGCTTG+TGG | + | chr6.1:64330207-64330226 | None:intergenic | 40.0% | |
| GGTCCATATTATTGTGGGAT+TGG | - | chr6.1:64331265-64331284 | MS.gene042906:intron | 40.0% | |
| GTTTCATTGTATGTAGGGTG+TGG | - | chr6.1:64333990-64334009 | MS.gene042906:intron | 40.0% | |
| TCCATCATTCAAACCCTAAG+AGG | + | chr6.1:64333679-64333698 | None:intergenic | 40.0% | |
| TGGAACTCCCACTACAAAAT+TGG | + | chr6.1:64332366-64332385 | None:intergenic | 40.0% | |
| TGGATAAGTCCTAAAACCCT+TGG | - | chr6.1:64329614-64329633 | MS.gene042906:intron | 40.0% | |
| TGTTACTAGGGTGATTGGAA+TGG | - | chr6.1:64332758-64332777 | MS.gene042906:intron | 40.0% | |
| ! | AAGGTTACTTTGAGGACAGA+AGG | - | chr6.1:64334064-64334083 | MS.gene042906:intron | 40.0% |
| ! | AGATGGCAAAGGTTACTTTG+AGG | - | chr6.1:64334056-64334075 | MS.gene042906:intron | 40.0% |
| ! | ATTCTAACCGGAATTGGCTT+AGG | + | chr6.1:64332614-64332633 | None:intergenic | 40.0% |
| ! | CAGACATCAACACCTTTTCT+TGG | - | chr6.1:64333332-64333351 | MS.gene042906:CDS | 40.0% |
| ! | GCATTGTACCTCTTGTTTGT+TGG | + | chr6.1:64330435-64330454 | None:intergenic | 40.0% |
| ! | TTCTAACCGGAATTGGCTTA+GGG | + | chr6.1:64332613-64332632 | None:intergenic | 40.0% |
| ! | TTTTGATGTAATACCTGGCC+AGG | + | chr6.1:64331388-64331407 | None:intergenic | 40.0% |
| !! | AGGAGCATTAAGATGTTGGA+AGG | - | chr6.1:64333754-64333773 | MS.gene042906:intron | 40.0% |
| !! | GAGTAGGAGCATTAAGATGT+TGG | - | chr6.1:64333750-64333769 | MS.gene042906:intron | 40.0% |
| AACCACTCCCAACAAACAAG+AGG | - | chr6.1:64330424-64330443 | MS.gene042906:intron | 45.0% | |
| AAGGGTGGTTTCAGCAATCA+TGG | + | chr6.1:64334124-64334143 | None:intergenic | 45.0% | |
| AAGTCAATGAGAGAGGATGG+AGG | - | chr6.1:64333199-64333218 | MS.gene042906:intron | 45.0% | |
| ATCAATGGAGAGGTTATGCC+TGG | - | chr6.1:64331367-64331386 | MS.gene042906:intron | 45.0% | |
| CAGCACAAAGTCAATGAGAG+AGG | - | chr6.1:64333192-64333211 | MS.gene042906:intron | 45.0% | |
| CCAGCAGAAATACCAACAGA+AGG | + | chr6.1:64332396-64332415 | None:intergenic | 45.0% | |
| CTGGTGCTCACACAAACTAT+AGG | - | chr6.1:64332783-64332802 | MS.gene042906:intron | 45.0% | |
| TCAAGCACAAATCAAGCTCC+AGG | - | chr6.1:64330036-64330055 | MS.gene042906:intron | 45.0% | |
| TCATGGTTTCCATAGAAGGG+TGG | + | chr6.1:64334139-64334158 | None:intergenic | 45.0% | |
| TGAGGACATATTGCTGAGCT+TGG | - | chr6.1:64333708-64333727 | MS.gene042906:intron | 45.0% | |
| TTGCTGAAACCACCCTTCTA+TGG | - | chr6.1:64334127-64334146 | MS.gene042906:CDS | 45.0% | |
| ! | AAGGAGCACATTGCTGCTTA+TGG | - | chr6.1:64333268-64333287 | MS.gene042906:intron | 45.0% |
| ! | CACATTGCTGCTTATGGAGA+AGG | - | chr6.1:64333274-64333293 | MS.gene042906:intron | 45.0% |
| ! | CCTTCTGTTGGTATTTCTGC+TGG | - | chr6.1:64332393-64332412 | MS.gene042906:intron | 45.0% |
| ! | TACCTCTTGTTTGTTGGGAG+TGG | + | chr6.1:64330429-64330448 | None:intergenic | 45.0% |
| ! | TAGGGCTTTGGTACCTCTTA+GGG | - | chr6.1:64333663-64333682 | MS.gene042906:intron | 45.0% |
| ! | TTGTAGTGGGAGTTCCAAGT+TGG | - | chr6.1:64332369-64332388 | MS.gene042906:intron | 45.0% |
| !! | AAGGGCATTCTAACCGGAAT+TGG | + | chr6.1:64332620-64332639 | None:intergenic | 45.0% |
| !! | ATAAACAGGGTTGGTGGATC+TGG | - | chr6.1:64329809-64329828 | MS.gene042906:intron | 45.0% |
| !! | CTCTCTCATTGACTTTGTGC+TGG | + | chr6.1:64333194-64333213 | None:intergenic | 45.0% |
| !! | TTACCCTGGCTTTGCTTCTA+AGG | + | chr6.1:64329841-64329860 | None:intergenic | 45.0% |
| !! | AAATTTAAAAATAGTTAAAA+AGG | + | chr6.1:64332639-64332658 | None:intergenic | 5.0% |
| !! | AATTTAAAAATAGTTAAAAA+GGG | + | chr6.1:64332638-64332657 | None:intergenic | 5.0% |
| !! | TATATTAATTATATTTGAAT+AGG | - | chr6.1:64330297-64330316 | MS.gene042906:intron | 5.0% |
| !!! | ATGTTAAAAATTTTTTTTTA+AGG | + | chr6.1:64331081-64331100 | None:intergenic | 5.0% |
| AAACCGTGGTGCCTCAGTTA+GGG | - | chr6.1:64334014-64334033 | MS.gene042906:intron | 50.0% | |
| CAGAGGATCACAGAGATAGC+TGG | - | chr6.1:64332569-64332588 | MS.gene042906:CDS | 50.0% | |
| CGCAAGTTTGTGACCTGAGT+AGG | - | chr6.1:64333734-64333753 | MS.gene042906:intron | 50.0% | |
| GATCACAGAGATAGCTGGAG+TGG | - | chr6.1:64332574-64332593 | MS.gene042906:intron | 50.0% | |
| GGAAATGAGAGACGTCTCAC+TGG | - | chr6.1:64333295-64333314 | MS.gene042906:intron | 50.0% | |
| GGACCTTAGAAGCAAAGCCA+GGG | - | chr6.1:64329835-64329854 | MS.gene042906:intron | 50.0% | |
| GGCTGCTCGTTACATTCTAG+AGG | - | chr6.1:64332428-64332447 | MS.gene042906:intron | 50.0% | |
| GTACCTCAGCAGCAACATCA+GGG | + | chr6.1:64330476-64330495 | None:intergenic | 50.0% | |
| GTCTCTTCCAACCCTAACTG+AGG | + | chr6.1:64334028-64334047 | None:intergenic | 50.0% | |
| TACCAACAGAAGGGCCAACT+TGG | + | chr6.1:64332386-64332405 | None:intergenic | 50.0% | |
| TAGGGTGATTGGAATGGAGC+TGG | - | chr6.1:64332764-64332783 | MS.gene042906:intron | 50.0% | |
| TGGACCTTAGAAGCAAAGCC+AGG | - | chr6.1:64329834-64329853 | MS.gene042906:intron | 50.0% | |
| TGTGATGTTTACACCCCAGC+TGG | - | chr6.1:64330399-64330418 | MS.gene042906:intron | 50.0% | |
| ! | AGTTTTGCAGGGTCACTCAC+TGG | + | chr6.1:64329994-64330013 | None:intergenic | 50.0% |
| ! | ATGTTGCTGCTGAGGTACCA+TGG | - | chr6.1:64330478-64330497 | MS.gene042906:intron | 50.0% |
| ! | CGGAGGATTCTGAGAGATTG+AGG | + | chr6.1:64329262-64329281 | None:intergenic | 50.0% |
| ! | CTAGGGCTTTGGTACCTCTT+AGG | - | chr6.1:64333662-64333681 | MS.gene042906:intron | 50.0% |
| ! | TTCCAAGTTGGCCCTTCTGT+TGG | - | chr6.1:64332381-64332400 | MS.gene042906:intron | 50.0% |
| ATGTAGGGTGTGGCAAACCG+TGG | - | chr6.1:64334000-64334019 | MS.gene042906:intron | 55.0% | |
| CAAACCGTGGTGCCTCAGTT+AGG | - | chr6.1:64334013-64334032 | MS.gene042906:intron | 55.0% | |
| CCACCAATAGGCCATCCTAG+TGG | + | chr6.1:64330853-64330872 | None:intergenic | 55.0% | |
| CCACTAGGATGGCCTATTGG+TGG | - | chr6.1:64330850-64330869 | MS.gene042906:intron | 55.0% | |
| GGTACCTCAGCAGCAACATC+AGG | + | chr6.1:64330477-64330496 | None:intergenic | 55.0% | |
| GGTCCTGGAAAGCCACCAAT+AGG | + | chr6.1:64330865-64330884 | None:intergenic | 55.0% | |
| TCACCCTGATGTTGCTGCTG+AGG | - | chr6.1:64330470-64330489 | MS.gene042906:intron | 55.0% | |
| TGGCCACTAGGATGGCCTAT+TGG | - | chr6.1:64330847-64330866 | MS.gene042906:intron | 55.0% | |
| TTGGGAGTGGTTCACCAGCT+GGG | + | chr6.1:64330416-64330435 | None:intergenic | 55.0% | |
| ! | CAACCCTAACTGAGGCACCA+CGG | + | chr6.1:64334020-64334039 | None:intergenic | 55.0% |
| ! | TGGCCTATTGGTGGCTTTCC+AGG | - | chr6.1:64330859-64330878 | MS.gene042906:intron | 55.0% |
| !! | CAGGGTTGGTGGATCTGGTA+TGG | - | chr6.1:64329814-64329833 | MS.gene042906:intron | 55.0% |
| CGTGGTGCCTCAGTTAGGGT+TGG | - | chr6.1:64334018-64334037 | MS.gene042906:intron | 60.0% | |
| GTTGGGAGTGGTTCACCAGC+TGG | + | chr6.1:64330417-64330436 | None:intergenic | 60.0% | |
| TGGAGAGGTTATGCCTGGCC+AGG | - | chr6.1:64331372-64331391 | MS.gene042906:intron | 60.0% | |
| TGGGAGTGGTTCACCAGCTG+GGG | + | chr6.1:64330415-64330434 | None:intergenic | 60.0% | |
| GCAGGGTCACTCACTGGACC+AGG | + | chr6.1:64329988-64330007 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 64329233 | 64334158 | 64329233 | ID=MS.gene042906 |
| chr6.1 | mRNA | 64329233 | 64334158 | 64329233 | ID=MS.gene042906.t1;Parent=MS.gene042906 |
| chr6.1 | exon | 64334085 | 64334158 | 64334085 | ID=MS.gene042906.t1.exon1;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64334085 | 64334158 | 64334085 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64333535 | 64333574 | 64333535 | ID=MS.gene042906.t1.exon2;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64333535 | 64333574 | 64333535 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64333309 | 64333412 | 64333309 | ID=MS.gene042906.t1.exon3;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64333309 | 64333412 | 64333309 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64333140 | 64333188 | 64333140 | ID=MS.gene042906.t1.exon4;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64333140 | 64333188 | 64333140 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64332892 | 64332998 | 64332892 | ID=MS.gene042906.t1.exon5;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64332892 | 64332998 | 64332892 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64332503 | 64332590 | 64332503 | ID=MS.gene042906.t1.exon6;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64332503 | 64332590 | 64332503 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64331998 | 64332126 | 64331998 | ID=MS.gene042906.t1.exon7;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64331998 | 64332126 | 64331998 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64330942 | 64331016 | 64330942 | ID=MS.gene042906.t1.exon8;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64330942 | 64331016 | 64330942 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64330766 | 64330819 | 64330766 | ID=MS.gene042906.t1.exon9;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64330766 | 64330819 | 64330766 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64330587 | 64330624 | 64330587 | ID=MS.gene042906.t1.exon10;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64330587 | 64330624 | 64330587 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64330037 | 64330196 | 64330037 | ID=MS.gene042906.t1.exon11;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64330037 | 64330196 | 64330037 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| chr6.1 | exon | 64329233 | 64329385 | 64329233 | ID=MS.gene042906.t1.exon12;Parent=MS.gene042906.t1 |
| chr6.1 | CDS | 64329233 | 64329385 | 64329233 | ID=cds.MS.gene042906.t1;Parent=MS.gene042906.t1 |
| Gene Sequence |
| Protein sequence |
