Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72618.t1 | Q43785.1 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 2.20E-211 | 744.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72618.t1 | Q43785 | 99.2 | 356 | 3 | 0 | 1 | 356 | 1 | 356 | 5.2e-214 | 744.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72618.t1 | O04998 | 98.9 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 1.0e-210 | 741.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050868 | MS.gene72618 | -0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene72618 | -0.803227 | 3.85E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene72618 | 0.814512 | 1.48E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene72618 | 0.815631 | 8.37E-52 | -1.69E-46 |
| MS.gene051367 | MS.gene72618 | 0.822454 | 2.35E-53 | -1.69E-46 |
| MS.gene053108 | MS.gene72618 | 0.805205 | 1.49E-49 | -1.69E-46 |
| MS.gene053421 | MS.gene72618 | 0.838511 | 2.75E-57 | -1.69E-46 |
| MS.gene055202 | MS.gene72618 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene72618 | 0.806594 | 7.62E-50 | -1.69E-46 |
| MS.gene057768 | MS.gene72618 | 0.844955 | 5.49E-59 | -1.69E-46 |
| MS.gene058171 | MS.gene72618 | 0.828508 | 8.65E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene72618 | 0.825227 | 5.26E-54 | -1.69E-46 |
| MS.gene058175 | MS.gene72618 | 0.834336 | 3.18E-56 | -1.69E-46 |
| MS.gene059045 | MS.gene72618 | 0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene05960 | MS.gene72618 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene06042 | MS.gene72618 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene72618 | 0.826023 | 3.41E-54 | -1.69E-46 |
| MS.gene060823 | MS.gene72618 | 0.803686 | 3.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04986 | MS.gene72618 | PPI |
| MS.gene004521 | MS.gene72618 | PPI |
| MS.gene72618 | MS.gene002835 | PPI |
| MS.gene00927 | MS.gene72618 | PPI |
| MS.gene72618 | MS.gene00925 | PPI |
| MS.gene048734 | MS.gene72618 | PPI |
| MS.gene048690 | MS.gene72618 | PPI |
| MS.gene004523 | MS.gene72618 | PPI |
| MS.gene72618 | MS.gene008294 | PPI |
| MS.gene72618 | MS.gene01810 | PPI |
| MS.gene72618 | MS.gene01811 | PPI |
| MS.gene72618 | MS.gene002836 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72618.t1 | MTR_6g071070 | 98.876 | 356 | 4 | 0 | 1 | 356 | 1 | 356 | 0.0 | 725 |
| MS.gene72618.t1 | MTR_3g065250 | 89.607 | 356 | 37 | 0 | 1 | 356 | 1 | 356 | 0.0 | 677 |
| MS.gene72618.t1 | MTR_5g077950 | 85.070 | 355 | 53 | 0 | 2 | 356 | 3 | 357 | 0.0 | 644 |
| MS.gene72618.t1 | MTR_2g021255 | 78.652 | 356 | 76 | 0 | 1 | 356 | 57 | 412 | 0.0 | 612 |
| MS.gene72618.t1 | MTR_2g021242 | 75.000 | 356 | 89 | 0 | 1 | 356 | 57 | 412 | 0.0 | 592 |
| MS.gene72618.t1 | MTR_2g021255 | 78.899 | 327 | 69 | 0 | 1 | 327 | 57 | 383 | 0.0 | 560 |
| MS.gene72618.t1 | MTR_8g062840 | 59.000 | 100 | 28 | 2 | 257 | 356 | 1 | 87 | 1.72e-29 | 110 |
| MS.gene72618.t1 | MTR_2g021248 | 42.657 | 143 | 31 | 4 | 214 | 355 | 7 | 99 | 3.91e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72618.t1 | AT1G66200 | 90.449 | 356 | 34 | 0 | 1 | 356 | 1 | 356 | 0.0 | 678 |
| MS.gene72618.t1 | AT5G37600 | 89.045 | 356 | 39 | 0 | 1 | 356 | 1 | 356 | 0.0 | 676 |
| MS.gene72618.t1 | AT1G66200 | 88.219 | 365 | 34 | 1 | 1 | 356 | 1 | 365 | 0.0 | 670 |
| MS.gene72618.t1 | AT3G17820 | 86.402 | 353 | 48 | 0 | 1 | 353 | 1 | 353 | 0.0 | 658 |
| MS.gene72618.t1 | AT5G16570 | 84.831 | 356 | 54 | 0 | 1 | 356 | 1 | 356 | 0.0 | 654 |
| MS.gene72618.t1 | AT1G48470 | 81.953 | 338 | 61 | 0 | 16 | 353 | 16 | 353 | 0.0 | 607 |
| MS.gene72618.t1 | AT5G35630 | 78.187 | 353 | 77 | 0 | 4 | 356 | 62 | 414 | 0.0 | 603 |
| MS.gene72618.t1 | AT5G35630 | 78.187 | 353 | 77 | 0 | 4 | 356 | 62 | 414 | 0.0 | 603 |
| MS.gene72618.t1 | AT5G35630 | 78.187 | 353 | 77 | 0 | 4 | 356 | 62 | 414 | 0.0 | 603 |
| MS.gene72618.t1 | AT1G66200 | 90.079 | 252 | 25 | 0 | 1 | 252 | 1 | 252 | 2.64e-172 | 480 |
| MS.gene72618.t1 | AT5G16570 | 81.667 | 240 | 44 | 0 | 1 | 240 | 1 | 240 | 9.17e-153 | 430 |
Find 96 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGCTGGAGATGAAATT+TGG | 0.150793 | 6.4:-48479066 | MS.gene72618:CDS |
| ATATTGTTGCCTTGTCTAAA+TGG | 0.224649 | 6.4:+48481019 | None:intergenic |
| ACCCTTCAAAACTTCCTAAA+TGG | 0.243549 | 6.4:-48481243 | MS.gene72618:CDS |
| GATCCATCATAGTTCCATTT+AGG | 0.252717 | 6.4:+48481229 | None:intergenic |
| TTACCCTGGCTTTGCTTCTA+AGG | 0.260345 | 6.4:+48481406 | None:intergenic |
| TGGCCTATTGGTGGCTTTCC+AGG | 0.261567 | 6.4:-48480350 | MS.gene72618:CDS |
| CAGAAGGCCTTCTTCTAATA+TGG | 0.269659 | 6.4:-48477527 | MS.gene72618:CDS |
| ATCAGGGTGACTGAAAATTT+TGG | 0.293766 | 6.4:+48480785 | None:intergenic |
| TATTGCAGAAAGATACTAAT+TGG | 0.302912 | 6.4:-48480382 | MS.gene72618:CDS |
| GTTGGGAGTGGTTCACCAGC+TGG | 0.311962 | 6.4:+48480828 | None:intergenic |
| AAGGAGCACATTGCTGCTTA+TGG | 0.321020 | 6.4:-48478207 | MS.gene72618:CDS |
| CATTGTGCCTCTTGTTTGTT+GGG | 0.328802 | 6.4:+48480811 | None:intergenic |
| GCACCAATCCCACAATAATA+TGG | 0.333506 | 6.4:+48479979 | None:intergenic |
| TTATACAGGGTTGGTGGATC+TGG | 0.345573 | 6.4:-48481435 | MS.gene72618:intron |
| GACTTCATGGTTTCCATAGA+AGG | 0.346715 | 6.4:+48477467 | None:intergenic |
| TTGCTGAAACTACCCTTCTA+TGG | 0.348042 | 6.4:-48477480 | MS.gene72618:CDS |
| AAGGGCATTCTAACCGGAAT+TGG | 0.349045 | 6.4:+48478858 | None:intergenic |
| ATTCTAACCGGAATTGGCTT+AGG | 0.356734 | 6.4:+48478864 | None:intergenic |
| TTCTGCTGGAGATGAAATTT+GGG | 0.364580 | 6.4:-48479065 | MS.gene72618:CDS |
| GCATTGTGCCTCTTGTTTGT+TGG | 0.366714 | 6.4:+48480810 | None:intergenic |
| ATTGTTGTTACTAGGGTGAT+TGG | 0.368030 | 6.4:-48478722 | MS.gene72618:intron |
| CCTTCTGTTGGTATTTCTGC+TGG | 0.371824 | 6.4:-48479079 | MS.gene72618:CDS |
| TATGCTGGCATTAACATTAG+TGG | 0.389669 | 6.4:-48479904 | MS.gene72618:CDS |
| TTGGGAGTGGTTCACCAGCT+GGG | 0.397770 | 6.4:+48480829 | None:intergenic |
| CAAACCGTGGTGCCTCAGTT+AGG | 0.400634 | 6.4:-48477594 | MS.gene72618:CDS |
| CAGAGGATTCTGAGAGATTG+AGG | 0.402405 | 6.4:+48481998 | None:intergenic |
| GGTACCTCAGCAGCAACATC+AGG | 0.435763 | 6.4:+48480768 | None:intergenic |
| TGCCTCTTGTTTGTTGGGAG+TGG | 0.442023 | 6.4:+48480816 | None:intergenic |
| AAAATTCATACTTGTGGTCC+TGG | 0.443867 | 6.4:+48480332 | None:intergenic |
| AACAGGGTCCATATTATTGT+GGG | 0.450127 | 6.4:-48479987 | MS.gene72618:intron |
| CTTCCTAAATGGAACTATGA+TGG | 0.457898 | 6.4:-48481232 | MS.gene72618:CDS |
| TACCAACAGAAGGGCCAACT+TGG | 0.457942 | 6.4:+48479089 | None:intergenic |
| TACAAAGCTTGTCTTTATGC+TGG | 0.462426 | 6.4:-48479919 | MS.gene72618:CDS |
| CCACTAGGATGGCCTATTGG+TGG | 0.464713 | 6.4:-48480359 | MS.gene72618:CDS |
| ATTTGACCCTAAGCCAATTC+CGG | 0.465261 | 6.4:-48478871 | MS.gene72618:intron |
| GGTCCATATTATTGTGGGAT+TGG | 0.467497 | 6.4:-48479982 | MS.gene72618:CDS |
| AGATTATTGCTGAATACATA+TGG | 0.469751 | 6.4:-48481972 | MS.gene72618:intron |
| AAGGGTAGTTTCAGCAATCA+TGG | 0.474054 | 6.4:+48477486 | None:intergenic |
| ATCAATGGAGAGGTTATGCC+TGG | 0.479715 | 6.4:-48479880 | MS.gene72618:CDS |
| TTCCAAGTTGGCCCTTCTGT+TGG | 0.480743 | 6.4:-48479091 | MS.gene72618:CDS |
| GGTCCTGGAAAGCCACCAAT+AGG | 0.482434 | 6.4:+48480347 | None:intergenic |
| GGAAATGAGAGACGTCTCAC+TGG | 0.484871 | 6.4:-48478180 | MS.gene72618:CDS |
| TGGCCACTAGGATGGCCTAT+TGG | 0.485125 | 6.4:-48480362 | MS.gene72618:CDS |
| AAACCGTGGTGCCTCAGTTA+GGG | 0.490188 | 6.4:-48477593 | MS.gene72618:CDS |
| AAAGCTTAGATTGAGGCATA+AGG | 0.491860 | 6.4:-48478226 | MS.gene72618:CDS |
| TTCTAACCGGAATTGGCTTA+GGG | 0.495438 | 6.4:+48478865 | None:intergenic |
| TGGACCTTAGAAGCAAAGCC+AGG | 0.496641 | 6.4:-48481410 | MS.gene72618:CDS |
| CAGAGGATCACAGAGATAGC+TGG | 0.499269 | 6.4:-48478906 | MS.gene72618:CDS |
| GAACAGGGTCCATATTATTG+TGG | 0.501632 | 6.4:-48479988 | MS.gene72618:intron |
| ATTAACATTAGTGGCATCAA+TGG | 0.503694 | 6.4:-48479895 | MS.gene72618:CDS |
| CAGGGTTGGTGGATCTGGTA+TGG | 0.514346 | 6.4:-48481430 | MS.gene72618:CDS |
| TTGAATAAACAGACTCTACC+TGG | 0.521461 | 6.4:-48481277 | MS.gene72618:intron |
| ATCATGGAAGTGACCACATA+GGG | 0.521873 | 6.4:+48477502 | None:intergenic |
| CACATTGCTGCTTATGGAGA+AGG | 0.524445 | 6.4:-48478201 | MS.gene72618:CDS |
| TGGAGAGGTTATGCCTGGCC+AGG | 0.526189 | 6.4:-48479875 | MS.gene72618:intron |
| TAAAGAACTGACCCAAGAAA+AGG | 0.531510 | 6.4:+48478131 | None:intergenic |
| GAAGGGTCACTCACTGGACC+AGG | 0.538692 | 6.4:+48481259 | None:intergenic |
| TGGGAGTGGTTCACCAGCTG+GGG | 0.539124 | 6.4:+48480830 | None:intergenic |
| ATACTAATTGGCCACTAGGA+TGG | 0.540230 | 6.4:-48480370 | MS.gene72618:CDS |
| TCAAGCACAAATCAAGCTCC+AGG | 0.541387 | 6.4:-48481208 | MS.gene72618:CDS |
| TGTGATGTTTACACCCCAGC+TGG | 0.552836 | 6.4:-48480843 | MS.gene72618:CDS |
| ATAACTTCACTATCTTGTCC+TGG | 0.553036 | 6.4:+48481190 | None:intergenic |
| ACAAAGTCAATGAGAGAGGA+TGG | 0.553563 | 6.4:-48478279 | MS.gene72618:CDS |
| CTGGTGCTCACACAAACTAT+AGG | 0.555909 | 6.4:-48478692 | MS.gene72618:intron |
| ACTTCATGGTTTCCATAGAA+GGG | 0.556533 | 6.4:+48477468 | None:intergenic |
| GGCTGCTCGTTACATTCTAG+AGG | 0.557853 | 6.4:-48479044 | MS.gene72618:intron |
| AAGGTTACTTTGAGGACAGA+AGG | 0.559707 | 6.4:-48477543 | MS.gene72618:CDS |
| TAGGGATCCATATTAGAAGA+AGG | 0.561293 | 6.4:+48477520 | None:intergenic |
| TTCTAATATGGATCCCTATG+TGG | 0.561605 | 6.4:-48477515 | MS.gene72618:CDS |
| TCACCCTGATGTTGCTGCTG+AGG | 0.562513 | 6.4:-48480772 | MS.gene72618:CDS |
| CGTGGTGCCTCAGTTAGGGT+TGG | 0.568100 | 6.4:-48477589 | MS.gene72618:CDS |
| AAAGATACTAATTGGCCACT+AGG | 0.568445 | 6.4:-48480374 | MS.gene72618:CDS |
| TGTTACTAGGGTGATTGGAA+TGG | 0.570387 | 6.4:-48478717 | MS.gene72618:intron |
| GGATCCTTGAAAATAGCTTG+TGG | 0.575621 | 6.4:+48481040 | None:intergenic |
| ATTGGTGCTGATAAAGCATA+TGG | 0.577793 | 6.4:-48479964 | MS.gene72618:CDS |
| TAGGGTGATTGGAATGGAGC+TGG | 0.587168 | 6.4:-48478711 | MS.gene72618:CDS |
| CCATTGAAAAGCTTAGATTG+AGG | 0.596334 | 6.4:-48478233 | MS.gene72618:CDS |
| AGATGGCAAAGGTTACTTTG+AGG | 0.600333 | 6.4:-48477551 | MS.gene72618:CDS |
| TTATAGTGGGAGTTCCAAGT+TGG | 0.601131 | 6.4:-48479103 | MS.gene72618:intron |
| TTCAAGGATCCATTTAGACA+AGG | 0.602322 | 6.4:-48481028 | MS.gene72618:CDS |
| ATGTTGCTGCTGAGGTACCA+TGG | 0.605031 | 6.4:-48480764 | MS.gene72618:intron |
| CCAGCAGAAATACCAACAGA+AGG | 0.605255 | 6.4:+48479079 | None:intergenic |
| GATCACAGAGATAGCTGGAG+TGG | 0.613338 | 6.4:-48478901 | MS.gene72618:CDS |
| AATCATGGAAGTGACCACAT+AGG | 0.616584 | 6.4:+48477501 | None:intergenic |
| CATTAGTGGCATCAATGGAG+AGG | 0.622524 | 6.4:-48479890 | MS.gene72618:CDS |
| AGGCTATGAAATCATCAAGA+AGG | 0.629772 | 6.4:-48478256 | MS.gene72618:CDS |
| AACCACTCCCAACAAACAAG+AGG | 0.633508 | 6.4:-48480818 | MS.gene72618:CDS |
| CAGCACAAAGTCAATGAGAG+AGG | 0.636631 | 6.4:-48478283 | MS.gene72618:CDS |
| CAGCAGAAATACCAACAGAA+GGG | 0.642583 | 6.4:+48479080 | None:intergenic |
| GGACCTTAGAAGCAAAGCCA+GGG | 0.664228 | 6.4:-48481409 | MS.gene72618:intron |
| GTACCTCAGCAGCAACATCA+GGG | 0.665566 | 6.4:+48480769 | None:intergenic |
| CAACCCTAACTGAGGCACCA+CGG | 0.665899 | 6.4:+48477590 | None:intergenic |
| GTCTCTTCCAACCCTAACTG+AGG | 0.685094 | 6.4:+48477582 | None:intergenic |
| AAGTCAATGAGAGAGGATGG+AGG | 0.709816 | 6.4:-48478276 | MS.gene72618:CDS |
| ATGTAGGGTGTGGCAAACCG+TGG | 0.713160 | 6.4:-48477607 | MS.gene72618:intron |
| CCACCAATAGGCCATCCTAG+TGG | 0.722635 | 6.4:+48480359 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTATTTATTCATTTAT+TGG | - | chr6.4:48478180-48478199 | MS.gene72618:CDS | 10.0% |
| !! | TATATATTATATTATTACAG+AGG | - | chr6.4:48480572-48480591 | MS.gene72618:intron | 10.0% |
| !!! | ATTATAGGTATATTTTAAAA+GGG | - | chr6.4:48477713-48477732 | MS.gene72618:intron | 10.0% |
| !!! | ATTATATAACAATTTTATAG+TGG | - | chr6.4:48480378-48480397 | MS.gene72618:CDS | 10.0% |
| !!! | ATTCAAGAAATATTAATTTT+TGG | + | chr6.4:48479057-48479076 | None:intergenic | 10.0% |
| !!! | ATTCTTCTTTTTAAAAATTA+AGG | - | chr6.4:48481701-48481720 | MS.gene72618:intron | 10.0% |
| !!! | GTTTTTTATTATTATCTTAT+TGG | - | chr6.4:48480328-48480347 | MS.gene72618:intron | 10.0% |
| !!! | TCTAAATTTTTTATTTTGAA+GGG | - | chr6.4:48480501-48480520 | MS.gene72618:intron | 10.0% |
| !!! | TTATATAACAATTTTATAGT+GGG | - | chr6.4:48480379-48480398 | MS.gene72618:CDS | 10.0% |
| !!! | TTCTAAATTTTTTATTTTGA+AGG | - | chr6.4:48480500-48480519 | MS.gene72618:intron | 10.0% |
| !! | AATAATCAAAACAAACAAAA+AGG | + | chr6.4:48478422-48478441 | None:intergenic | 15.0% |
| !! | ATACTACATAATCTAAAAAA+GGG | + | chr6.4:48478826-48478845 | None:intergenic | 15.0% |
| !! | GTTACAAAAACAAAAATTTA+AGG | + | chr6.4:48479367-48479386 | None:intergenic | 15.0% |
| !! | TAACAAACATTATAACATAT+TGG | - | chr6.4:48480826-48480845 | MS.gene72618:CDS | 15.0% |
| !! | TATACTACATAATCTAAAAA+AGG | + | chr6.4:48478827-48478846 | None:intergenic | 15.0% |
| !! | TTTAATTGTATCAAAAACAA+GGG | + | chr6.4:48477887-48477906 | None:intergenic | 15.0% |
| !!! | AACATTTTTATTGATATTCT+TGG | + | chr6.4:48480535-48480554 | None:intergenic | 15.0% |
| !!! | AATATACATTTTGATTAACT+AGG | + | chr6.4:48478583-48478602 | None:intergenic | 15.0% |
| !!! | AATTGAAATTTTTCTCATAT+TGG | - | chr6.4:48481488-48481507 | MS.gene72618:intron | 15.0% |
| !!! | ATATATATATTGTTTTGAAC+AGG | - | chr6.4:48479491-48479510 | MS.gene72618:intron | 15.0% |
| !!! | ATTATTGTATAGTTTTCTTA+TGG | - | chr6.4:48477848-48477867 | MS.gene72618:intron | 15.0% |
| !!! | ATTCATTTATTGGTTTTTTT+TGG | - | chr6.4:48478190-48478209 | MS.gene72618:CDS | 15.0% |
| !!! | ATTTGTTAAAAACTTTTGTA+TGG | - | chr6.4:48480675-48480694 | MS.gene72618:intron | 15.0% |
| !!! | GATTATAGGTATATTTTAAA+AGG | - | chr6.4:48477712-48477731 | MS.gene72618:intron | 15.0% |
| !!! | TATATATATTGTTTTGAACA+GGG | - | chr6.4:48479492-48479511 | MS.gene72618:intron | 15.0% |
| !!! | TCATTTTCTTATTATTTCAT+TGG | - | chr6.4:48481183-48481202 | MS.gene72618:intron | 15.0% |
| !!! | TTTATTTTCCAATTTTTCTA+AGG | - | chr6.4:48479443-48479462 | MS.gene72618:intron | 15.0% |
| !!! | TTTTTCAATTTTGACATAAT+TGG | - | chr6.4:48478516-48478535 | MS.gene72618:intron | 15.0% |
| !! | ATACCAAATCCAAAATATTA+AGG | + | chr6.4:48481841-48481860 | None:intergenic | 20.0% |
| !! | ATATTACAAATAAACCATAG+AGG | + | chr6.4:48477911-48477930 | None:intergenic | 20.0% |
| !! | ATCAACTATTACAATTTCAA+GGG | - | chr6.4:48480268-48480287 | MS.gene72618:intron | 20.0% |
| !! | CAAAACAAGATAAACATAAA+GGG | + | chr6.4:48479233-48479252 | None:intergenic | 20.0% |
| !! | CAAACAAACAAATATCAAAA+TGG | + | chr6.4:48480749-48480768 | None:intergenic | 20.0% |
| !! | GAATTTGAAAGGATAATAAA+TGG | + | chr6.4:48478797-48478816 | None:intergenic | 20.0% |
| !! | GGAAAATAAAAAGTTATGTA+CGG | + | chr6.4:48479433-48479452 | None:intergenic | 20.0% |
| !! | GTTTAATTGTATCAAAAACA+AGG | + | chr6.4:48477888-48477907 | None:intergenic | 20.0% |
| !! | TAAAACCTAAGAATCAAAAT+AGG | + | chr6.4:48478774-48478793 | None:intergenic | 20.0% |
| !! | TATTACAAATAAACCATAGA+GGG | + | chr6.4:48477910-48477929 | None:intergenic | 20.0% |
| !! | TATTTCTTGAATGTATTAAC+AGG | - | chr6.4:48479065-48479084 | MS.gene72618:CDS | 20.0% |
| !! | TGATATGTCATTATGATTAT+AGG | - | chr6.4:48477698-48477717 | MS.gene72618:intron | 20.0% |
| !!! | AAACATTCTAGTCTTTAAAA+TGG | - | chr6.4:48480102-48480121 | MS.gene72618:intron | 20.0% |
| !!! | AAATATTAAGGTATGTTTTG+AGG | + | chr6.4:48481829-48481848 | None:intergenic | 20.0% |
| !!! | AAATATTTTGATGTAATACC+TGG | + | chr6.4:48479641-48479660 | None:intergenic | 20.0% |
| !!! | AGATAAATTGTTCATTTTAG+AGG | - | chr6.4:48480047-48480066 | MS.gene72618:intron | 20.0% |
| !!! | ATACCTTAATATTTTGGATT+TGG | - | chr6.4:48481835-48481854 | MS.gene72618:intron | 20.0% |
| !!! | CAAAACATACCTTAATATTT+TGG | - | chr6.4:48481829-48481848 | MS.gene72618:intron | 20.0% |
| !!! | GATTTTTCAATAACAAACTA+GGG | - | chr6.4:48481531-48481550 | MS.gene72618:intron | 20.0% |
| !!! | GGTTGAAAAATTTGATAATT+GGG | + | chr6.4:48479263-48479282 | None:intergenic | 20.0% |
| !!! | TGATTTTTCAATAACAAACT+AGG | - | chr6.4:48481530-48481549 | MS.gene72618:intron | 20.0% |
| !!! | TGGTTGAAAAATTTGATAAT+TGG | + | chr6.4:48479264-48479283 | None:intergenic | 20.0% |
| !!! | TTTGTTATTATGTGAATTTG+TGG | - | chr6.4:48480192-48480211 | MS.gene72618:intron | 20.0% |
| !!! | TTTTATTTTTTATACAGGGT+TGG | - | chr6.4:48478051-48478070 | MS.gene72618:intron | 20.0% |
| ! | AAAATCAAGAAGGAAAAAGA+AGG | + | chr6.4:48479205-48479224 | None:intergenic | 25.0% |
| ! | AAAGACATGTATCTTAGATT+TGG | + | chr6.4:48479284-48479303 | None:intergenic | 25.0% |
| ! | AATAAGAAAAACCATTTCCT+TGG | + | chr6.4:48479310-48479329 | None:intergenic | 25.0% |
| ! | AATAGATCAACCAAAGAAAA+GGG | + | chr6.4:48477973-48477992 | None:intergenic | 25.0% |
| ! | ACATAAACCTTATGAAAACA+GGG | - | chr6.4:48477572-48477591 | MS.gene72618:CDS | 25.0% |
| ! | ACTAAATAGTGGTTAAATAG+TGG | + | chr6.4:48480966-48480985 | None:intergenic | 25.0% |
| ! | AGATTATTGCTGAATACATA+TGG | - | chr6.4:48477523-48477542 | MS.gene72618:CDS | 25.0% |
| ! | ATGACAAATAATGTGTTACA+TGG | + | chr6.4:48478972-48478991 | None:intergenic | 25.0% |
| ! | ATTTACTCAAATTTCGCTAT+GGG | + | chr6.4:48480898-48480917 | None:intergenic | 25.0% |
| ! | CAAAAGAACCTTAGAAAAAT+TGG | + | chr6.4:48479454-48479473 | None:intergenic | 25.0% |
| ! | CAAGAAAAAATTCATACTTG+TGG | + | chr6.4:48479172-48479191 | None:intergenic | 25.0% |
| ! | CCAAAACAAGATAAACATAA+AGG | + | chr6.4:48479234-48479253 | None:intergenic | 25.0% |
| ! | CTAAACCTATGGTTTATTTA+TGG | - | chr6.4:48477800-48477819 | MS.gene72618:intron | 25.0% |
| ! | GATCAACTATTACAATTTCA+AGG | - | chr6.4:48480267-48480286 | MS.gene72618:intron | 25.0% |
| ! | GTTATGTTTCATTGTATGTA+GGG | - | chr6.4:48481873-48481892 | MS.gene72618:intron | 25.0% |
| ! | TAAATAAACCATAGGTTTAG+AGG | + | chr6.4:48477800-48477819 | None:intergenic | 25.0% |
| ! | TAAGTATTTGTCAAGAAAGT+TGG | - | chr6.4:48481432-48481451 | MS.gene72618:intron | 25.0% |
| ! | TAATAGATCAACCAAAGAAA+AGG | + | chr6.4:48477974-48477993 | None:intergenic | 25.0% |
| ! | TACATAAACCTTATGAAAAC+AGG | - | chr6.4:48477571-48477590 | MS.gene72618:CDS | 25.0% |
| ! | TATTGCAGAAAGATACTAAT+TGG | - | chr6.4:48479113-48479132 | MS.gene72618:intron | 25.0% |
| ! | TGTTATGTTTCATTGTATGT+AGG | - | chr6.4:48481872-48481891 | MS.gene72618:intron | 25.0% |
| ! | TTAAGAAATAACAATTACCC+TGG | + | chr6.4:48478106-48478125 | None:intergenic | 25.0% |
| ! | TTGATCCATAAATAAACCAT+AGG | + | chr6.4:48477808-48477827 | None:intergenic | 25.0% |
| ! | TTGTGGGAAAAAAAATATTC+AGG | - | chr6.4:48478624-48478643 | MS.gene72618:intron | 25.0% |
| !! | ATACATATGGTAAGGTTTTA+AGG | - | chr6.4:48477536-48477555 | MS.gene72618:CDS | 25.0% |
| !! | TAAGAAATATGTTGATAGAG+AGG | - | chr6.4:48480133-48480152 | MS.gene72618:intron | 25.0% |
| !! | TTGTTACATTGTTGTTACTA+GGG | - | chr6.4:48480766-48480785 | MS.gene72618:CDS | 25.0% |
| !! | TTTGTTACATTGTTGTTACT+AGG | - | chr6.4:48480765-48480784 | MS.gene72618:CDS | 25.0% |
| !!! | AAGGGTTTTAAGAATTTGAA+AGG | + | chr6.4:48478808-48478827 | None:intergenic | 25.0% |
| !!! | AATGATGGATTTTAGATATG+AGG | - | chr6.4:48481576-48481595 | MS.gene72618:intron | 25.0% |
| !!! | ATACATTTTGATTAACTAGG+AGG | + | chr6.4:48478580-48478599 | None:intergenic | 25.0% |
| !!! | CCTTTATGTTTATCTTGTTT+TGG | - | chr6.4:48479231-48479250 | MS.gene72618:intron | 25.0% |
| AACCTAAGAATCAAAATAGG+AGG | + | chr6.4:48478771-48478790 | None:intergenic | 30.0% | |
| AAGAATCAAAATAGGAGGTT+AGG | + | chr6.4:48478766-48478785 | None:intergenic | 30.0% | |
| AAGGGAACAAAAAATCAAGA+AGG | + | chr6.4:48479215-48479234 | None:intergenic | 30.0% | |
| ATATTGTTGCCTTGTCTAAA+TGG | + | chr6.4:48478479-48478498 | None:intergenic | 30.0% | |
| ATTAACATTAGTGGCATCAA+TGG | - | chr6.4:48479600-48479619 | MS.gene72618:intron | 30.0% | |
| ATTGCTGAATACATATGGTA+AGG | - | chr6.4:48477528-48477547 | MS.gene72618:CDS | 30.0% | |
| CATAAACCTTATGAAAACAG+GGG | - | chr6.4:48477573-48477592 | MS.gene72618:CDS | 30.0% | |
| CTTGAATGTATTAACAGGTA+TGG | - | chr6.4:48479070-48479089 | MS.gene72618:CDS | 30.0% | |
| GATTTACTCAAATTTCGCTA+TGG | + | chr6.4:48480899-48480918 | None:intergenic | 30.0% | |
| TGATACAATTAAACCCTCTA+TGG | - | chr6.4:48477894-48477913 | MS.gene72618:intron | 30.0% | |
| TTGACAAATGTTCACTTTGT+GGG | - | chr6.4:48478608-48478627 | MS.gene72618:intron | 30.0% | |
| TTTGACAAATGTTCACTTTG+TGG | - | chr6.4:48478607-48478626 | MS.gene72618:intron | 30.0% | |
| TTTGATGTGTGTCCAAAAAA+AGG | - | chr6.4:48481666-48481685 | MS.gene72618:intron | 30.0% | |
| ! | GTATCAAAAACAAGGGTTTT+AGG | + | chr6.4:48477880-48477899 | None:intergenic | 30.0% |
| ! | TTCAGCAATAATCTTTTCAG+AGG | + | chr6.4:48477517-48477536 | None:intergenic | 30.0% |
| !! | TTCCATTTAGGAAGTTTTGA+AGG | + | chr6.4:48478257-48478276 | None:intergenic | 30.0% |
| !!! | AACCTCCTATTTTGATTCTT+AGG | - | chr6.4:48478766-48478785 | MS.gene72618:intron | 30.0% |
| !!! | TATTTTTTATACAGGGTTGG+TGG | - | chr6.4:48478054-48478073 | MS.gene72618:intron | 30.0% |
| !!! | TCCATTTAGGAAGTTTTGAA+GGG | + | chr6.4:48478256-48478275 | None:intergenic | 30.0% |
| AAAATTCATACTTGTGGTCC+TGG | + | chr6.4:48479166-48479185 | None:intergenic | 35.0% | |
| AAAGATACTAATTGGCCACT+AGG | - | chr6.4:48479121-48479140 | MS.gene72618:intron | 35.0% | |
| AAAGCTTAGATTGAGGCATA+AGG | - | chr6.4:48481269-48481288 | MS.gene72618:intron | 35.0% | |
| AACAGGGTCCATATTATTGT+GGG | - | chr6.4:48479508-48479527 | MS.gene72618:intron | 35.0% | |
| ACCCTTCAAAACTTCCTAAA+TGG | - | chr6.4:48478252-48478271 | MS.gene72618:CDS | 35.0% | |
| ACGCATATTGCGAAAAATAG+TGG | + | chr6.4:48481125-48481144 | None:intergenic | 35.0% | |
| AGGCTATGAAATCATCAAGA+AGG | - | chr6.4:48481239-48481258 | MS.gene72618:CDS | 35.0% | |
| AGGTTAGGAAATACATACCA+TGG | + | chr6.4:48478751-48478770 | None:intergenic | 35.0% | |
| ATAACTTCACTATCTTGTCC+TGG | + | chr6.4:48478308-48478327 | None:intergenic | 35.0% | |
| ATGAGCTATCGATGAAATCA+TGG | + | chr6.4:48480004-48480023 | None:intergenic | 35.0% | |
| CCATTGAAAAGCTTAGATTG+AGG | - | chr6.4:48481262-48481281 | MS.gene72618:CDS | 35.0% | |
| CGCACAAAGATACTAAATAG+TGG | + | chr6.4:48480977-48480996 | None:intergenic | 35.0% | |
| CTTCCTAAATGGAACTATGA+TGG | - | chr6.4:48478263-48478282 | MS.gene72618:CDS | 35.0% | |
| GATCCATCATAGTTCCATTT+AGG | + | chr6.4:48478269-48478288 | None:intergenic | 35.0% | |
| GTATCTTTGTGCGAAAATAG+TGG | - | chr6.4:48480984-48481003 | MS.gene72618:intron | 35.0% | |
| GTGTCCAAAAAAAGGATATG+AGG | - | chr6.4:48481674-48481693 | MS.gene72618:intron | 35.0% | |
| GTTCAAATCAGTTGAAATCG+TGG | + | chr6.4:48481025-48481044 | None:intergenic | 35.0% | |
| TAAAGAACTGACCCAAGAAA+AGG | + | chr6.4:48481367-48481386 | None:intergenic | 35.0% | |
| TACAAAGCTTGTCTTTATGC+TGG | - | chr6.4:48479576-48479595 | MS.gene72618:intron | 35.0% | |
| TAGGGATCCATATTAGAAGA+AGG | + | chr6.4:48481978-48481997 | None:intergenic | 35.0% | |
| TATGCTGGCATTAACATTAG+TGG | - | chr6.4:48479591-48479610 | MS.gene72618:intron | 35.0% | |
| TCAATAACAAACTAGGGCTT+TGG | - | chr6.4:48481537-48481556 | MS.gene72618:intron | 35.0% | |
| TCAATGTTCCTCTAAACCTA+TGG | - | chr6.4:48477789-48477808 | MS.gene72618:intron | 35.0% | |
| TTCAAGGATCCATTTAGACA+AGG | - | chr6.4:48478467-48478486 | MS.gene72618:intron | 35.0% | |
| TTCTAATATGGATCCCTATG+TGG | - | chr6.4:48481980-48481999 | MS.gene72618:CDS | 35.0% | |
| TTCTGCTGGAGATGAAATTT+GGG | - | chr6.4:48480430-48480449 | MS.gene72618:intron | 35.0% | |
| TTGAATAAACAGACTCTACC+TGG | - | chr6.4:48478218-48478237 | MS.gene72618:CDS | 35.0% | |
| TTTCTGCTGGAGATGAAATT+TGG | - | chr6.4:48480429-48480448 | MS.gene72618:intron | 35.0% | |
| ! | AGACATCAACACCTTTTCTT+GGG | - | chr6.4:48481353-48481372 | MS.gene72618:intron | 35.0% |
| ! | AGTCCTAAAACCCTTTTCTT+TGG | - | chr6.4:48477960-48477979 | MS.gene72618:intron | 35.0% |
| ! | ATCAGGGTGACTGAAAATTT+TGG | + | chr6.4:48478713-48478732 | None:intergenic | 35.0% |
| ! | ATTGTTGTTACTAGGGTGAT+TGG | - | chr6.4:48480773-48480792 | MS.gene72618:CDS | 35.0% |
| ! | CAACCAAAGAAAAGGGTTTT+AGG | + | chr6.4:48477966-48477985 | None:intergenic | 35.0% |
| ! | CCTCAATCTAAGCTTTTCAA+TGG | + | chr6.4:48481265-48481284 | None:intergenic | 35.0% |
| ! | GATACTCTGTTTTCAAACAG+GGG | - | chr6.4:48477595-48477614 | MS.gene72618:CDS | 35.0% |
| ! | GGATACTCTGTTTTCAAACA+GGG | - | chr6.4:48477594-48477613 | MS.gene72618:CDS | 35.0% |
| !! | AAGTCCACAAGCTATTTTCA+AGG | - | chr6.4:48478451-48478470 | MS.gene72618:intron | 35.0% |
| !! | ATTGGTGCTGATAAAGCATA+TGG | - | chr6.4:48479531-48479550 | MS.gene72618:intron | 35.0% |
| !! | GTTAAAAAGGGCATTCTAAC+CGG | + | chr6.4:48480646-48480665 | None:intergenic | 35.0% |
| !!! | ACGTCCTCATATCCTTTTTT+TGG | + | chr6.4:48481681-48481700 | None:intergenic | 35.0% |
| AAGGGTAGTTTCAGCAATCA+TGG | + | chr6.4:48482012-48482031 | None:intergenic | 40.0% | |
| AATCATGGAAGTGACCACAT+AGG | + | chr6.4:48481997-48482016 | None:intergenic | 40.0% | |
| ACAAAGTCAATGAGAGAGGA+TGG | - | chr6.4:48481216-48481235 | MS.gene72618:CDS | 40.0% | |
| ACATCTTAATGCTCCTACTC+AGG | + | chr6.4:48481636-48481655 | None:intergenic | 40.0% | |
| ACCTCTTAGGGTTTGAATGA+TGG | - | chr6.4:48481561-48481580 | MS.gene72618:intron | 40.0% | |
| ACGACAATGATCATTGACAC+TGG | - | chr6.4:48478873-48478892 | MS.gene72618:CDS | 40.0% | |
| AGATACATGTCTTTGTGCCA+AGG | - | chr6.4:48479290-48479309 | MS.gene72618:intron | 40.0% | |
| ATACTAATTGGCCACTAGGA+TGG | - | chr6.4:48479125-48479144 | MS.gene72618:intron | 40.0% | |
| ATCATGGAAGTGACCACATA+GGG | + | chr6.4:48481996-48482015 | None:intergenic | 40.0% | |
| ATGTCTTTGTGCCAAGGAAA+TGG | - | chr6.4:48479296-48479315 | MS.gene72618:intron | 40.0% | |
| ATTTGACCCTAAGCCAATTC+CGG | - | chr6.4:48480624-48480643 | MS.gene72618:intron | 40.0% | |
| CAAACTTGTGTTACCAAGCT+CGG | + | chr6.4:48481610-48481629 | None:intergenic | 40.0% | |
| CAGAAGGCCTTCTTCTAATA+TGG | - | chr6.4:48481968-48481987 | MS.gene72618:intron | 40.0% | |
| CAGCAGAAATACCAACAGAA+GGG | + | chr6.4:48480418-48480437 | None:intergenic | 40.0% | |
| GAACAGGGTCCATATTATTG+TGG | - | chr6.4:48479507-48479526 | MS.gene72618:intron | 40.0% | |
| GACACAGAAAAAGATGGCAA+AGG | - | chr6.4:48481933-48481952 | MS.gene72618:intron | 40.0% | |
| GCACCAATCCCACAATAATA+TGG | + | chr6.4:48479519-48479538 | None:intergenic | 40.0% | |
| GGAAGAGACACAGAAAAAGA+TGG | - | chr6.4:48481927-48481946 | MS.gene72618:intron | 40.0% | |
| GGATCCTTGAAAATAGCTTG+TGG | + | chr6.4:48478458-48478477 | None:intergenic | 40.0% | |
| GGTCCATATTATTGTGGGAT+TGG | - | chr6.4:48479513-48479532 | MS.gene72618:intron | 40.0% | |
| GTTTCATTGTATGTAGGGTG+TGG | - | chr6.4:48481878-48481897 | MS.gene72618:intron | 40.0% | |
| TCCATCATTCAAACCCTAAG+AGG | + | chr6.4:48481565-48481584 | None:intergenic | 40.0% | |
| TGTTACTAGGGTGATTGGAA+TGG | - | chr6.4:48480778-48480797 | MS.gene72618:CDS | 40.0% | |
| TTGCTGAAACTACCCTTCTA+TGG | - | chr6.4:48482015-48482034 | MS.gene72618:CDS | 40.0% | |
| ! | AAGGTTACTTTGAGGACAGA+AGG | - | chr6.4:48481952-48481971 | MS.gene72618:intron | 40.0% |
| ! | AGATGGCAAAGGTTACTTTG+AGG | - | chr6.4:48481944-48481963 | MS.gene72618:intron | 40.0% |
| ! | ATTCTAACCGGAATTGGCTT+AGG | + | chr6.4:48480634-48480653 | None:intergenic | 40.0% |
| ! | CAGACATCAACACCTTTTCT+TGG | - | chr6.4:48481352-48481371 | MS.gene72618:intron | 40.0% |
| ! | CATTGTGCCTCTTGTTTGTT+GGG | + | chr6.4:48478687-48478706 | None:intergenic | 40.0% |
| ! | GAGTATCCCCTGTTTTCATA+AGG | + | chr6.4:48477582-48477601 | None:intergenic | 40.0% |
| ! | GGGATACTCTGTTTTCAAAC+AGG | - | chr6.4:48477593-48477612 | MS.gene72618:CDS | 40.0% |
| ! | TTATAGTGGGAGTTCCAAGT+TGG | - | chr6.4:48480392-48480411 | MS.gene72618:CDS | 40.0% |
| ! | TTCTAACCGGAATTGGCTTA+GGG | + | chr6.4:48480633-48480652 | None:intergenic | 40.0% |
| ! | TTTTGATGTAATACCTGGCC+AGG | + | chr6.4:48479636-48479655 | None:intergenic | 40.0% |
| !! | AGGAGCATTAAGATGTTGGA+AGG | - | chr6.4:48481640-48481659 | MS.gene72618:intron | 40.0% |
| !! | GAGTAGGAGCATTAAGATGT+TGG | - | chr6.4:48481636-48481655 | MS.gene72618:intron | 40.0% |
| AACCACTCCCAACAAACAAG+AGG | - | chr6.4:48478677-48478696 | MS.gene72618:intron | 45.0% | |
| AAGTCAATGAGAGAGGATGG+AGG | - | chr6.4:48481219-48481238 | MS.gene72618:CDS | 45.0% | |
| ATCAATGGAGAGGTTATGCC+TGG | - | chr6.4:48479615-48479634 | MS.gene72618:intron | 45.0% | |
| CACAAGTTTGTGACCTGAGT+AGG | - | chr6.4:48481620-48481639 | MS.gene72618:intron | 45.0% | |
| CAGCACAAAGTCAATGAGAG+AGG | - | chr6.4:48481212-48481231 | MS.gene72618:CDS | 45.0% | |
| CATTAGTGGCATCAATGGAG+AGG | - | chr6.4:48479605-48479624 | MS.gene72618:intron | 45.0% | |
| CCAGCAGAAATACCAACAGA+AGG | + | chr6.4:48480419-48480438 | None:intergenic | 45.0% | |
| CTGGTGCTCACACAAACTAT+AGG | - | chr6.4:48480803-48480822 | MS.gene72618:CDS | 45.0% | |
| TCAAGCACAAATCAAGCTCC+AGG | - | chr6.4:48478287-48478306 | MS.gene72618:intron | 45.0% | |
| ! | AAGGAGCACATTGCTGCTTA+TGG | - | chr6.4:48481288-48481307 | MS.gene72618:intron | 45.0% |
| ! | CACATTGCTGCTTATGGAGA+AGG | - | chr6.4:48481294-48481313 | MS.gene72618:intron | 45.0% |
| ! | CAGAGGATTCTGAGAGATTG+AGG | + | chr6.4:48477500-48477519 | None:intergenic | 45.0% |
| ! | CCTTCTGTTGGTATTTCTGC+TGG | - | chr6.4:48480416-48480435 | MS.gene72618:intron | 45.0% |
| ! | GCATTGTGCCTCTTGTTTGT+TGG | + | chr6.4:48478688-48478707 | None:intergenic | 45.0% |
| ! | TAGGGCTTTGGTACCTCTTA+GGG | - | chr6.4:48481549-48481568 | MS.gene72618:intron | 45.0% |
| !! | AAGGGCATTCTAACCGGAAT+TGG | + | chr6.4:48480640-48480659 | None:intergenic | 45.0% |
| !! | CTCTCTCATTGACTTTGTGC+TGG | + | chr6.4:48481214-48481233 | None:intergenic | 45.0% |
| !! | TTACCCTGGCTTTGCTTCTA+AGG | + | chr6.4:48478092-48478111 | None:intergenic | 45.0% |
| !! | TTATACAGGGTTGGTGGATC+TGG | - | chr6.4:48478060-48478079 | MS.gene72618:intron | 45.0% |
| !!! | AGTTTTGAAGGGTCACTCAC+TGG | + | chr6.4:48478245-48478264 | None:intergenic | 45.0% |
| !! | AAATTTAAAAATAGTTAAAA+AGG | + | chr6.4:48480659-48480678 | None:intergenic | 5.0% |
| !! | AATTTAAAAATAGTTAAAAA+GGG | + | chr6.4:48480658-48480677 | None:intergenic | 5.0% |
| !! | TATATTAATTATATTTGAAT+AGG | - | chr6.4:48478548-48478567 | MS.gene72618:intron | 5.0% |
| !!! | TTTTTTTTATTTTTTATACA+GGG | - | chr6.4:48478047-48478066 | MS.gene72618:intron | 5.0% |
| !!! | TTTTTTTTTATTTTTTATAC+AGG | - | chr6.4:48478046-48478065 | MS.gene72618:intron | 5.0% |
| AAACCGTGGTGCCTCAGTTA+GGG | - | chr6.4:48481902-48481921 | MS.gene72618:intron | 50.0% | |
| CAGAGGATCACAGAGATAGC+TGG | - | chr6.4:48480589-48480608 | MS.gene72618:intron | 50.0% | |
| GATCACAGAGATAGCTGGAG+TGG | - | chr6.4:48480594-48480613 | MS.gene72618:intron | 50.0% | |
| GGAAATGAGAGACGTCTCAC+TGG | - | chr6.4:48481315-48481334 | MS.gene72618:intron | 50.0% | |
| GGACCTTAGAAGCAAAGCCA+GGG | - | chr6.4:48478086-48478105 | MS.gene72618:intron | 50.0% | |
| GGCTGCTCGTTACATTCTAG+AGG | - | chr6.4:48480451-48480470 | MS.gene72618:intron | 50.0% | |
| GTACCTCAGCAGCAACATCA+GGG | + | chr6.4:48478729-48478748 | None:intergenic | 50.0% | |
| GTCTCTTCCAACCCTAACTG+AGG | + | chr6.4:48481916-48481935 | None:intergenic | 50.0% | |
| TACCAACAGAAGGGCCAACT+TGG | + | chr6.4:48480409-48480428 | None:intergenic | 50.0% | |
| TAGGGTGATTGGAATGGAGC+TGG | - | chr6.4:48480784-48480803 | MS.gene72618:CDS | 50.0% | |
| TGAGGACATATTGCCGAGCT+TGG | - | chr6.4:48481594-48481613 | MS.gene72618:intron | 50.0% | |
| TGGACCTTAGAAGCAAAGCC+AGG | - | chr6.4:48478085-48478104 | MS.gene72618:intron | 50.0% | |
| TGTGATGTTTACACCCCAGC+TGG | - | chr6.4:48478652-48478671 | MS.gene72618:intron | 50.0% | |
| ! | ATGTTGCTGCTGAGGTACCA+TGG | - | chr6.4:48478731-48478750 | MS.gene72618:intron | 50.0% |
| ! | CTAGGGCTTTGGTACCTCTT+AGG | - | chr6.4:48481548-48481567 | MS.gene72618:intron | 50.0% |
| ! | TGCCTCTTGTTTGTTGGGAG+TGG | + | chr6.4:48478682-48478701 | None:intergenic | 50.0% |
| ! | TTCCAAGTTGGCCCTTCTGT+TGG | - | chr6.4:48480404-48480423 | MS.gene72618:CDS | 50.0% |
| ATGTAGGGTGTGGCAAACCG+TGG | - | chr6.4:48481888-48481907 | MS.gene72618:intron | 55.0% | |
| CAAACCGTGGTGCCTCAGTT+AGG | - | chr6.4:48481901-48481920 | MS.gene72618:intron | 55.0% | |
| CCACCAATAGGCCATCCTAG+TGG | + | chr6.4:48479139-48479158 | None:intergenic | 55.0% | |
| CCACTAGGATGGCCTATTGG+TGG | - | chr6.4:48479136-48479155 | MS.gene72618:intron | 55.0% | |
| GGTACCTCAGCAGCAACATC+AGG | + | chr6.4:48478730-48478749 | None:intergenic | 55.0% | |
| GGTCCTGGAAAGCCACCAAT+AGG | + | chr6.4:48479151-48479170 | None:intergenic | 55.0% | |
| TCACCCTGATGTTGCTGCTG+AGG | - | chr6.4:48478723-48478742 | MS.gene72618:intron | 55.0% | |
| TGGCCACTAGGATGGCCTAT+TGG | - | chr6.4:48479133-48479152 | MS.gene72618:intron | 55.0% | |
| TTGGGAGTGGTTCACCAGCT+GGG | + | chr6.4:48478669-48478688 | None:intergenic | 55.0% | |
| ! | CAACCCTAACTGAGGCACCA+CGG | + | chr6.4:48481908-48481927 | None:intergenic | 55.0% |
| ! | TGGCCTATTGGTGGCTTTCC+AGG | - | chr6.4:48479145-48479164 | MS.gene72618:intron | 55.0% |
| !! | CAGGGTTGGTGGATCTGGTA+TGG | - | chr6.4:48478065-48478084 | MS.gene72618:intron | 55.0% |
| CGTGGTGCCTCAGTTAGGGT+TGG | - | chr6.4:48481906-48481925 | MS.gene72618:intron | 60.0% | |
| GAAGGGTCACTCACTGGACC+AGG | + | chr6.4:48478239-48478258 | None:intergenic | 60.0% | |
| GTTGGGAGTGGTTCACCAGC+TGG | + | chr6.4:48478670-48478689 | None:intergenic | 60.0% | |
| TGGAGAGGTTATGCCTGGCC+AGG | - | chr6.4:48479620-48479639 | MS.gene72618:intron | 60.0% | |
| TGGGAGTGGTTCACCAGCTG+GGG | + | chr6.4:48478668-48478687 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 48477471 | 48482046 | 48477471 | ID=MS.gene72618 |
| chr6.4 | mRNA | 48477471 | 48482046 | 48477471 | ID=MS.gene72618.t1;Parent=MS.gene72618 |
| chr6.4 | exon | 48481973 | 48482046 | 48481973 | ID=MS.gene72618.t1.exon1;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48481973 | 48482046 | 48481973 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48481410 | 48481449 | 48481410 | ID=MS.gene72618.t1.exon2;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48481410 | 48481449 | 48481410 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48481184 | 48481287 | 48481184 | ID=MS.gene72618.t1.exon3;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48481184 | 48481287 | 48481184 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48481015 | 48481063 | 48481015 | ID=MS.gene72618.t1.exon4;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48481015 | 48481063 | 48481015 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48480765 | 48480871 | 48480765 | ID=MS.gene72618.t1.exon5;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48480765 | 48480871 | 48480765 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48480343 | 48480430 | 48480343 | ID=MS.gene72618.t1.exon6;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48480343 | 48480430 | 48480343 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48479876 | 48480004 | 48479876 | ID=MS.gene72618.t1.exon7;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48479876 | 48480004 | 48479876 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48479045 | 48479119 | 48479045 | ID=MS.gene72618.t1.exon8;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48479045 | 48479119 | 48479045 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48478872 | 48478925 | 48478872 | ID=MS.gene72618.t1.exon9;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48478872 | 48478925 | 48478872 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48478693 | 48478730 | 48478693 | ID=MS.gene72618.t1.exon10;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48478693 | 48478730 | 48478693 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48478143 | 48478302 | 48478143 | ID=MS.gene72618.t1.exon11;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48478143 | 48478302 | 48478143 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| chr6.4 | exon | 48477471 | 48477623 | 48477471 | ID=MS.gene72618.t1.exon12;Parent=MS.gene72618.t1 |
| chr6.4 | CDS | 48477471 | 48477623 | 48477471 | ID=cds.MS.gene72618.t1;Parent=MS.gene72618.t1 |
| Gene Sequence |
| Protein sequence |
