Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009080.t1 | XP_013446003.1 | 94.1 | 506 | 30 | 0 | 1 | 506 | 1 | 506 | 6.90E-280 | 972.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009080.t1 | O80763 | 55.0 | 565 | 184 | 3 | 11 | 506 | 15 | 578 | 2.4e-180 | 633.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009080.t1 | A0A072U2K8 | 94.1 | 506 | 30 | 0 | 1 | 506 | 1 | 506 | 5.0e-280 | 972.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63007 | MS.gene009080 | PPI |
| MS.gene009080 | MS.gene026627 | PPI |
| MS.gene026628 | MS.gene009080 | PPI |
| MS.gene009080 | MS.gene33593 | PPI |
| MS.gene009080 | MS.gene59310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009080.t1 | MTR_8g064840 | 94.071 | 506 | 30 | 0 | 1 | 506 | 1 | 506 | 0.0 | 970 |
| MS.gene009080.t1 | MTR_8g064810 | 85.331 | 484 | 71 | 0 | 1 | 484 | 1 | 484 | 0.0 | 845 |
| MS.gene009080.t1 | MTR_8g064810 | 36.499 | 337 | 211 | 3 | 166 | 501 | 6 | 340 | 4.43e-63 | 215 |
| MS.gene009080.t1 | MTR_3g109120 | 38.291 | 316 | 193 | 2 | 175 | 490 | 19 | 332 | 5.01e-76 | 244 |
| MS.gene009080.t1 | MTR_3g109120 | 34.043 | 329 | 212 | 5 | 9 | 335 | 13 | 338 | 1.54e-61 | 207 |
| MS.gene009080.t1 | MTR_3g114530 | 40.379 | 317 | 175 | 5 | 175 | 477 | 40 | 356 | 2.28e-75 | 244 |
| MS.gene009080.t1 | MTR_3g114530 | 40.190 | 316 | 174 | 4 | 15 | 315 | 40 | 355 | 2.38e-74 | 241 |
| MS.gene009080.t1 | MTR_3g114530 | 44.586 | 157 | 74 | 4 | 12 | 156 | 201 | 356 | 1.61e-33 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009080.t1 | AT1G60420 | 62.316 | 475 | 178 | 1 | 9 | 483 | 13 | 486 | 0.0 | 629 |
| MS.gene009080.t1 | AT1G60420 | 38.623 | 334 | 202 | 3 | 170 | 502 | 14 | 345 | 1.65e-68 | 230 |
| MS.gene009080.t1 | AT1G60420 | 42.683 | 164 | 90 | 3 | 329 | 490 | 13 | 174 | 8.27e-35 | 138 |
| MS.gene009080.t1 | AT4G31240 | 38.871 | 319 | 193 | 2 | 172 | 490 | 17 | 333 | 5.01e-74 | 239 |
| MS.gene009080.t1 | AT4G31240 | 33.861 | 316 | 205 | 4 | 11 | 324 | 16 | 329 | 1.89e-61 | 206 |
| MS.gene009080.t1 | AT4G31240 | 38.871 | 319 | 193 | 2 | 172 | 490 | 17 | 333 | 5.01e-74 | 239 |
| MS.gene009080.t1 | AT4G31240 | 33.861 | 316 | 205 | 4 | 11 | 324 | 16 | 329 | 1.89e-61 | 206 |
Find 126 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACATGAAACAATTCTTTA+AGG | 0.135448 | 8.1:+38589362 | None:intergenic |
| CTCCCCTCCTTTGTTGTTAT+TGG | 0.141349 | 8.1:-38588735 | MS.gene009080:CDS |
| CGAGATCTGGTTGGGCTCTA+TGG | 0.142538 | 8.1:-38587538 | MS.gene009080:CDS |
| ATCACAAACCCATCCATCTT+TGG | 0.250320 | 8.1:+38587438 | None:intergenic |
| TCCCCTCCTTTGTTGTTATT+GGG | 0.261896 | 8.1:-38588734 | MS.gene009080:CDS |
| TGACTCTTCGTCATCATCTA+AGG | 0.272606 | 8.1:+38588851 | None:intergenic |
| CTTGGAAAAGTAGTTATTAA+AGG | 0.274755 | 8.1:+38589432 | None:intergenic |
| GTTCACATTATCCGTGAATA+TGG | 0.278551 | 8.1:-38589280 | MS.gene009080:CDS |
| TGTCTTGTGTCTTGATCTTA+AGG | 0.293186 | 8.1:+38587758 | None:intergenic |
| CTTGCATTGATTGATGAAAC+TGG | 0.298539 | 8.1:-38589325 | MS.gene009080:CDS |
| GATTCCGGTGTCGGAATTAA+AGG | 0.304659 | 8.1:-38587860 | MS.gene009080:CDS |
| AAACTTGTTTGAAACTAGTT+AGG | 0.330734 | 8.1:-38588776 | MS.gene009080:CDS |
| AAAGAATTGTTTCATGTAAA+CGG | 0.340648 | 8.1:-38589358 | MS.gene009080:CDS |
| AGTCGTAAATTCAAGGTATC+TGG | 0.347450 | 8.1:-38587616 | MS.gene009080:CDS |
| TCAAACACTTGAGTCAGTTT+TGG | 0.355313 | 8.1:-38588586 | MS.gene009080:CDS |
| AGGTATGCATCAATGAGTTT+TGG | 0.355397 | 8.1:+38587778 | None:intergenic |
| CTCTCCCAAGGGTGACTTTG+AGG | 0.370317 | 8.1:-38589488 | MS.gene009080:CDS |
| GCTATTTAATCAAAAGCTTA+AGG | 0.371039 | 8.1:-38588928 | MS.gene009080:CDS |
| CCAGTCCTTGAGATCGATAT+TGG | 0.378969 | 8.1:-38589185 | MS.gene009080:CDS |
| CTCCTTTGATGAATTCTTTG+CGG | 0.382375 | 8.1:-38587689 | MS.gene009080:CDS |
| CCATGGCTGGCACTTCCCTT+TGG | 0.383022 | 8.1:-38587661 | MS.gene009080:CDS |
| AACATGCAGATTTCAGGCTT+TGG | 0.384409 | 8.1:+38587402 | None:intergenic |
| TTTGGGCTTCTCTCCTTCCT+TGG | 0.391386 | 8.1:+38587456 | None:intergenic |
| TCACAAACCCATCCATCTTT+GGG | 0.399851 | 8.1:+38587439 | None:intergenic |
| TCTTCGAAACACCGGCGATC+AGG | 0.402540 | 8.1:-38590270 | MS.gene009080:intron |
| CACGAAAGAGGCTCGAGATC+TGG | 0.405594 | 8.1:-38587551 | MS.gene009080:CDS |
| GAGATCTGGTTGGGCTCTAT+GGG | 0.414235 | 8.1:-38587537 | MS.gene009080:CDS |
| GGTCCGATCGCCACAAGCTT+GGG | 0.414337 | 8.1:+38587589 | None:intergenic |
| TCAATGGCATCAGCGGCATT+AGG | 0.420216 | 8.1:+38588690 | None:intergenic |
| GGGAAAGTTGTTACCGAAGA+TGG | 0.441178 | 8.1:-38589304 | MS.gene009080:CDS |
| TTTCCCTCAATCTCAGAGAT+AGG | 0.443663 | 8.1:+38588996 | None:intergenic |
| TTTGTTGTTATTGGGCCAGA+TGG | 0.449806 | 8.1:-38588726 | MS.gene009080:CDS |
| AAGAATTAGAAAGCGTGCCT+TGG | 0.451706 | 8.1:-38588821 | MS.gene009080:CDS |
| AGCTTGAAGGGAAAGAAACT+TGG | 0.454943 | 8.1:-38589586 | MS.gene009080:CDS |
| TCCTCTACTTCTCAGCCCAC+TGG | 0.456326 | 8.1:-38587825 | MS.gene009080:CDS |
| GATACCCTTTCACATTAGAA+AGG | 0.462202 | 8.1:-38589249 | MS.gene009080:CDS |
| TGGTCCGATCGCCACAAGCT+TGG | 0.462521 | 8.1:+38587588 | None:intergenic |
| TTAGCTTACTTCATTTCTAT+CGG | 0.465037 | 8.1:+38589132 | None:intergenic |
| ATCTCTAGTGACAGGGATCA+AGG | 0.465580 | 8.1:-38587712 | MS.gene009080:CDS |
| GAGCCTCTTTCGTGACAGTC+AGG | 0.476275 | 8.1:+38587560 | None:intergenic |
| GATACCTATCTCTGAGATTG+AGG | 0.476914 | 8.1:-38589000 | MS.gene009080:CDS |
| ATTATCCGTGAATATGGAAC+TGG | 0.477075 | 8.1:-38589274 | MS.gene009080:CDS |
| AAGTGTTTGAGATGCCTCCT+TGG | 0.478467 | 8.1:+38588599 | None:intergenic |
| TGGTCTTCATCTCTAGTGAC+AGG | 0.485675 | 8.1:-38587720 | MS.gene009080:CDS |
| GGAGAGAATAAAAGAAATAG+AGG | 0.489082 | 8.1:-38587491 | MS.gene009080:CDS |
| TGAACCCTTTCTAATGTGAA+AGG | 0.489248 | 8.1:+38589244 | None:intergenic |
| AAGAGGCTCGAGATCTGGTT+GGG | 0.493773 | 8.1:-38587546 | MS.gene009080:CDS |
| AGAATTAGAAAGCGTGCCTT+GGG | 0.493792 | 8.1:-38588820 | MS.gene009080:CDS |
| AACAACCTCAAAGTCACCCT+TGG | 0.495759 | 8.1:+38589483 | None:intergenic |
| ATTTCTAAGTCGTAAATTCA+AGG | 0.495892 | 8.1:-38587623 | MS.gene009080:CDS |
| CGAAGAAGAAAGTCTCTATC+GGG | 0.499270 | 8.1:+38590287 | None:intergenic |
| TTGGGTATCCTTGCCTCTCA+AGG | 0.499540 | 8.1:-38588802 | MS.gene009080:CDS |
| GAACCCTTTCTAATGTGAAA+GGG | 0.499789 | 8.1:+38589245 | None:intergenic |
| CTTTGCGGAAATGCCATGGC+TGG | 0.502358 | 8.1:-38587674 | MS.gene009080:CDS |
| AGAGTTGAAAGATATAGAAG+AGG | 0.503305 | 8.1:-38589221 | MS.gene009080:CDS |
| GCTGATGCCATTGAGGATCA+TGG | 0.504159 | 8.1:-38588681 | MS.gene009080:CDS |
| GATAGCCAGCCATGGCATCT+TGG | 0.504355 | 8.1:+38589414 | None:intergenic |
| TTCGTGACAGTCAGGCCACT+TGG | 0.508645 | 8.1:+38587568 | None:intergenic |
| ATCCTCCAGTTCCATATTCA+CGG | 0.515188 | 8.1:+38589269 | None:intergenic |
| GATAATGTGAACTCCATCTT+CGG | 0.516592 | 8.1:+38589291 | None:intergenic |
| TCCATTGCAGATTCCGGTGT+CGG | 0.519940 | 8.1:-38587869 | MS.gene009080:intron |
| TCGAAGAAGAAAGTCTCTAT+CGG | 0.521912 | 8.1:+38590286 | None:intergenic |
| GAGATTGAGGGAAAGACAGT+TGG | 0.525484 | 8.1:-38588987 | MS.gene009080:CDS |
| ATTCCCAAGCTTGTGGCGAT+CGG | 0.529129 | 8.1:-38587592 | MS.gene009080:CDS |
| ACCAGTGGGCTGAGAAGTAG+AGG | 0.529711 | 8.1:+38587824 | None:intergenic |
| ATACCCTTTCACATTAGAAA+GGG | 0.530953 | 8.1:-38589248 | MS.gene009080:CDS |
| TTTATTCTCTCCTCAGTGAA+AGG | 0.534022 | 8.1:+38587502 | None:intergenic |
| ATACCTATCTCTGAGATTGA+GGG | 0.534296 | 8.1:-38588999 | MS.gene009080:CDS |
| GACTTTCTTCTTCGAAACAC+CGG | 0.534369 | 8.1:-38590278 | MS.gene009080:CDS |
| GAGAGAAGCCCAAAGATGGA+TGG | 0.538351 | 8.1:-38587447 | MS.gene009080:CDS |
| GTCTATCCCATGATCCTCAA+TGG | 0.543337 | 8.1:+38588674 | None:intergenic |
| CATTGAGAAAGATGGGAAGA+AGG | 0.544022 | 8.1:-38588541 | MS.gene009080:intron |
| TTGTTGTTATTGGGCCAGAT+GGG | 0.544610 | 8.1:-38588725 | MS.gene009080:CDS |
| GGAAAATGGGGAGAACTTTG+AGG | 0.545659 | 8.1:-38588886 | MS.gene009080:CDS |
| AAAGAGGCTCGAGATCTGGT+TGG | 0.548388 | 8.1:-38587547 | MS.gene009080:CDS |
| AGTGTCTCTGAATCAGAAAG+TGG | 0.548817 | 8.1:+38589391 | None:intergenic |
| GAAGGAGAGAAGCCCAAAGA+TGG | 0.550367 | 8.1:-38587451 | MS.gene009080:CDS |
| CTGATGCCATTGAGGATCAT+GGG | 0.553965 | 8.1:-38588680 | MS.gene009080:CDS |
| TGGCCTGACTGTCACGAAAG+AGG | 0.559786 | 8.1:-38587563 | MS.gene009080:CDS |
| GGCCCAATAACAACAAAGGA+GGG | 0.560017 | 8.1:+38588732 | None:intergenic |
| ACAACCTCAAAGTCACCCTT+GGG | 0.560092 | 8.1:+38589484 | None:intergenic |
| AGACAATGATGCGCTTGAAG+TGG | 0.563569 | 8.1:-38587740 | MS.gene009080:CDS |
| ATATAGAAGAGGAAGCTAAG+AGG | 0.564358 | 8.1:-38589210 | MS.gene009080:CDS |
| TAATGCCGCTGATGCCATTG+AGG | 0.573168 | 8.1:-38588688 | MS.gene009080:CDS |
| GACTCTTCGTCATCATCTAA+GGG | 0.575321 | 8.1:+38588852 | None:intergenic |
| ATCATTCACTCCAACGTTGG+TGG | 0.575473 | 8.1:-38589527 | MS.gene009080:CDS |
| TTCTCCTTTAATTCCGACAC+CGG | 0.575739 | 8.1:+38587856 | None:intergenic |
| TGAACTTGATGAAATAGCAA+AGG | 0.576272 | 8.1:-38588622 | MS.gene009080:CDS |
| ATTCACTCCAACGTTGGTGG+AGG | 0.578411 | 8.1:-38589524 | MS.gene009080:CDS |
| GTACAATGAACTCTCTCCCA+AGG | 0.579038 | 8.1:-38589500 | MS.gene009080:CDS |
| CCAATATCGATCTCAAGGAC+TGG | 0.581021 | 8.1:+38589185 | None:intergenic |
| AGAGAAGCCCAAAGATGGAT+GGG | 0.583984 | 8.1:-38587446 | MS.gene009080:CDS |
| TTCCGCAAAGAATTCATCAA+AGG | 0.584862 | 8.1:+38587687 | None:intergenic |
| TCGATCATTCACTCCAACGT+TGG | 0.585707 | 8.1:-38589530 | MS.gene009080:CDS |
| ATCTGGCATTCCCAAGCTTG+TGG | 0.593565 | 8.1:-38587599 | MS.gene009080:CDS |
| TTTGGAAGAAACTCACGGCA+TGG | 0.593881 | 8.1:+38587796 | None:intergenic |
| ATGATCCTCAATGGCATCAG+CGG | 0.595653 | 8.1:+38588683 | None:intergenic |
| AGAGACCAATATCGATCTCA+AGG | 0.596132 | 8.1:+38589180 | None:intergenic |
| GGATGATATCACAAAGTCAC+AGG | 0.599534 | 8.1:+38589153 | None:intergenic |
| ATCCGTGAATATGGAACTGG+AGG | 0.602853 | 8.1:-38589271 | MS.gene009080:CDS |
| ATTTAATCAAAAGCTTAAGG+AGG | 0.604615 | 8.1:-38588925 | MS.gene009080:CDS |
| AAAGATGGATGGGTTTGTGA+TGG | 0.605439 | 8.1:-38587436 | MS.gene009080:CDS |
| TCATCAATCAATGCAAGATG+AGG | 0.612326 | 8.1:+38589331 | None:intergenic |
| TTGCATTGATTGATGAAACT+GGG | 0.612878 | 8.1:-38589324 | MS.gene009080:CDS |
| TGATGAAATAGCAAAGGCCA+AGG | 0.612906 | 8.1:-38588616 | MS.gene009080:CDS |
| AATTCTTTGCGGAAATGCCA+TGG | 0.613584 | 8.1:-38587678 | MS.gene009080:CDS |
| CACGGCATGGAGGACACCAG+TGG | 0.616281 | 8.1:+38587809 | None:intergenic |
| AGTCTCTATCGGGAGAAGAG+AGG | 0.619260 | 8.1:+38590297 | None:intergenic |
| TGGCCCAATAACAACAAAGG+AGG | 0.620653 | 8.1:+38588731 | None:intergenic |
| ATCTGGCCCAATAACAACAA+AGG | 0.621741 | 8.1:+38588728 | None:intergenic |
| CCAAAGGGAAGTGCCAGCCA+TGG | 0.621888 | 8.1:+38587661 | None:intergenic |
| GCCCAATAACAACAAAGGAG+GGG | 0.624936 | 8.1:+38588733 | None:intergenic |
| TACAATGAACTCTCTCCCAA+GGG | 0.628684 | 8.1:-38589499 | MS.gene009080:CDS |
| ACGGCATGGAGGACACCAGT+GGG | 0.635887 | 8.1:+38587810 | None:intergenic |
| GTGTCTCTGAATCAGAAAGT+GGG | 0.644415 | 8.1:+38589392 | None:intergenic |
| AGTGGGCTGAGAAGTAGAGG+AGG | 0.655615 | 8.1:+38587827 | None:intergenic |
| TTGAGAGGCAAGGATACCCA+AGG | 0.662807 | 8.1:+38588804 | None:intergenic |
| GAAAGTGGGATAGCCAGCCA+TGG | 0.663948 | 8.1:+38589406 | None:intergenic |
| CTTGTGGCGATCGGACCAAG+TGG | 0.664406 | 8.1:-38587583 | MS.gene009080:CDS |
| TTGTACACCTCCACCAACGT+TGG | 0.673259 | 8.1:+38589517 | None:intergenic |
| AGATCTGGTTGGGCTCTATG+GGG | 0.677010 | 8.1:-38587536 | MS.gene009080:CDS |
| TGAAATAGCAAAGGCCAAGG+AGG | 0.686116 | 8.1:-38588613 | MS.gene009080:CDS |
| GGTCTTCATCTCTAGTGACA+GGG | 0.686873 | 8.1:-38587719 | MS.gene009080:CDS |
| GGAAGAAACTCACGGCATGG+AGG | 0.726391 | 8.1:+38587799 | None:intergenic |
| GTTGGAGTGAATGATCGACA+CGG | 0.772202 | 8.1:+38589535 | None:intergenic |
| AGATGCTTATCCTTTCACTG+AGG | 0.785205 | 8.1:-38587512 | MS.gene009080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAAATATAGATGTAT+TGG | - | chr8.1:38589798-38589817 | MS.gene009080:intron | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8.1:38589577-38589596 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8.1:38589576-38589595 | MS.gene009080:CDS | 15.0% |
| !! | TTAATAACGAATTAAAAAGA+GGG | + | chr8.1:38589850-38589869 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr8.1:38589284-38589303 | None:intergenic | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8.1:38589567-38589586 | MS.gene009080:CDS | 20.0% |
| !! | AAAGAATTGTTTCATGTAAA+CGG | - | chr8.1:38588397-38588416 | MS.gene009080:intron | 20.0% |
| !! | AAATTAAAACCTATGAAACA+CGG | + | chr8.1:38587889-38587908 | None:intergenic | 20.0% |
| !! | AACAAACAGATAATAACTAA+AGG | + | chr8.1:38588678-38588697 | None:intergenic | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr8.1:38589720-38589739 | None:intergenic | 20.0% |
| !! | AATGATTAAGAGAAAATGAA+TGG | + | chr8.1:38589610-38589629 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8.1:38589490-38589509 | None:intergenic | 20.0% |
| !! | AGTAGTTAATAAGGATAATT+TGG | - | chr8.1:38589686-38589705 | MS.gene009080:intron | 20.0% |
| !! | ATTTCTTCGACATAAAATAA+AGG | + | chr8.1:38587575-38587594 | None:intergenic | 20.0% |
| !! | GAAAAAAGTTATTATTGCAT+TGG | + | chr8.1:38589324-38589343 | None:intergenic | 20.0% |
| !! | GTTAATAACGAATTAAAAAG+AGG | + | chr8.1:38589851-38589870 | None:intergenic | 20.0% |
| !! | TTACATGAAACAATTCTTTA+AGG | + | chr8.1:38588396-38588415 | None:intergenic | 20.0% |
| !! | TTTCTTCGACATAAAATAAA+GGG | + | chr8.1:38587574-38587593 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTATTGTATATTG+TGG | - | chr8.1:38588054-38588073 | MS.gene009080:intron | 20.0% |
| !!! | TAGTTCTAAAAGTAATGTTT+TGG | + | chr8.1:38589388-38589407 | None:intergenic | 20.0% |
| !!! | TTAATTATGTGATTTTCTCA+CGG | - | chr8.1:38587762-38587781 | MS.gene009080:CDS | 20.0% |
| ! | ATTTAATCAAAAGCTTAAGG+AGG | - | chr8.1:38588830-38588849 | MS.gene009080:CDS | 25.0% |
| ! | ATTTCTAAGTCGTAAATTCA+AGG | - | chr8.1:38590132-38590151 | MS.gene009080:intron | 25.0% |
| ! | CTTATGATAATTGTTTGAAG+TGG | - | chr8.1:38588077-38588096 | MS.gene009080:intron | 25.0% |
| ! | CTTGGAAAAGTAGTTATTAA+AGG | + | chr8.1:38588326-38588345 | None:intergenic | 25.0% |
| ! | GCTATTTAATCAAAAGCTTA+AGG | - | chr8.1:38588827-38588846 | MS.gene009080:CDS | 25.0% |
| ! | TTAACTCAGTATGATATAGT+AGG | - | chr8.1:38588650-38588669 | MS.gene009080:CDS | 25.0% |
| ! | TTAATACCGATGAAATATTG+TGG | - | chr8.1:38588105-38588124 | MS.gene009080:intron | 25.0% |
| ! | TTAGCTTACTTCATTTCTAT+CGG | + | chr8.1:38588626-38588645 | None:intergenic | 25.0% |
| !! | AAACTTGTTTGAAACTAGTT+AGG | - | chr8.1:38588979-38588998 | MS.gene009080:CDS | 25.0% |
| !! | ATTTTGTCATTGAGAAAGAT+GGG | - | chr8.1:38589207-38589226 | MS.gene009080:CDS | 25.0% |
| !! | GTAAAAATTGATAGCTTGAA+GGG | - | chr8.1:38588157-38588176 | MS.gene009080:intron | 25.0% |
| !!! | GTTTTTATTTTTCAGCATCA+TGG | - | chr8.1:38588191-38588210 | MS.gene009080:intron | 25.0% |
| !!! | TAAAACGACTCATTTTGAAA+CGG | - | chr8.1:38589767-38589786 | MS.gene009080:intron | 25.0% |
| AATTAAAAAGAGGGAGTGAT+GGG | + | chr8.1:38589841-38589860 | None:intergenic | 30.0% | |
| ACAAAAACCTGAAGGAAAAT+GGG | - | chr8.1:38588856-38588875 | MS.gene009080:CDS | 30.0% | |
| AGAGTTGAAAGATATAGAAG+AGG | - | chr8.1:38588534-38588553 | MS.gene009080:intron | 30.0% | |
| ATACCCTTTCACATTAGAAA+GGG | - | chr8.1:38588507-38588526 | MS.gene009080:intron | 30.0% | |
| ATAGCACCACAATATTTCAT+CGG | + | chr8.1:38588114-38588133 | None:intergenic | 30.0% | |
| GGAGAGAATAAAAGAAATAG+AGG | - | chr8.1:38590264-38590283 | MS.gene009080:intron | 30.0% | |
| GTAATTATATGTGTCAGTGT+CGG | + | chr8.1:38587731-38587750 | None:intergenic | 30.0% | |
| TAAATGAACTACATGATCTG+TGG | + | chr8.1:38588703-38588722 | None:intergenic | 30.0% | |
| TACAAAAACCTGAAGGAAAA+TGG | - | chr8.1:38588855-38588874 | MS.gene009080:CDS | 30.0% | |
| TGAACTTGATGAAATAGCAA+AGG | - | chr8.1:38589133-38589152 | MS.gene009080:intron | 30.0% | |
| ! | GATTTTGTCATTGAGAAAGA+TGG | - | chr8.1:38589206-38589225 | MS.gene009080:CDS | 30.0% |
| ! | GGTAAAAATTGATAGCTTGA+AGG | - | chr8.1:38588156-38588175 | MS.gene009080:intron | 30.0% |
| ! | GTTTTACTTGAGTTTTCTTC+TGG | - | chr8.1:38588026-38588045 | MS.gene009080:intron | 30.0% |
| ! | TCAAGTTCAGAAAACTTTTC+AGG | + | chr8.1:38589122-38589141 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8.1:38589659-38589678 | MS.gene009080:intron | 30.0% |
| !! | GTTTCAAAATGAGTCGTTTT+AGG | + | chr8.1:38589768-38589787 | None:intergenic | 30.0% |
| !! | TTGCATTGATTGATGAAACT+GGG | - | chr8.1:38588431-38588450 | MS.gene009080:intron | 30.0% |
| !! | TTTTGATTAAATAGCACGCA+TGG | + | chr8.1:38588822-38588841 | None:intergenic | 30.0% |
| !!! | ATGTCATTTTCTCATGATGT+CGG | - | chr8.1:38587673-38587692 | MS.gene009080:CDS | 30.0% |
| !!! | TCTCATATTTTGAAACTCAC+AGG | - | chr8.1:38588135-38588154 | MS.gene009080:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8.1:38589658-38589677 | None:intergenic | 30.0% |
| ATATAGAAGAGGAAGCTAAG+AGG | - | chr8.1:38588545-38588564 | MS.gene009080:CDS | 35.0% | |
| ATTAAAAAGAGGGAGTGATG+GGG | + | chr8.1:38589840-38589859 | None:intergenic | 35.0% | |
| ATTATCCGTGAATATGGAAC+TGG | - | chr8.1:38588481-38588500 | MS.gene009080:intron | 35.0% | |
| CAAAAACCTGAAGGAAAATG+GGG | - | chr8.1:38588857-38588876 | MS.gene009080:CDS | 35.0% | |
| CATGAAAGGAAAAGTCAGAT+TGG | + | chr8.1:38588726-38588745 | None:intergenic | 35.0% | |
| CTCCTTTGATGAATTCTTTG+CGG | - | chr8.1:38590066-38590085 | MS.gene009080:intron | 35.0% | |
| GAACCCTTTCTAATGTGAAA+GGG | + | chr8.1:38588513-38588532 | None:intergenic | 35.0% | |
| GAATTAAAAAGAGGGAGTGA+TGG | + | chr8.1:38589842-38589861 | None:intergenic | 35.0% | |
| GATAATGTGAACTCCATCTT+CGG | + | chr8.1:38588467-38588486 | None:intergenic | 35.0% | |
| GATACCCTTTCACATTAGAA+AGG | - | chr8.1:38588506-38588525 | MS.gene009080:intron | 35.0% | |
| GTAATTATACGTGTCAGTGT+CGG | + | chr8.1:38587645-38587664 | None:intergenic | 35.0% | |
| GTAGTGTGCTGAGTATTAAT+TGG | + | chr8.1:38589363-38589382 | None:intergenic | 35.0% | |
| GTTCACATTATCCGTGAATA+TGG | - | chr8.1:38588475-38588494 | MS.gene009080:intron | 35.0% | |
| TCATCAATCAATGCAAGATG+AGG | + | chr8.1:38588427-38588446 | None:intergenic | 35.0% | |
| TCGAAGAAGAAAGTCTCTAT+CGG | + | chr8.1:38587472-38587491 | None:intergenic | 35.0% | |
| TGAACCCTTTCTAATGTGAA+AGG | + | chr8.1:38588514-38588533 | None:intergenic | 35.0% | |
| TGTCTTGTGTCTTGATCTTA+AGG | + | chr8.1:38590000-38590019 | None:intergenic | 35.0% | |
| TGTGCTGAGTATTAATTGGA+GGG | + | chr8.1:38589359-38589378 | None:intergenic | 35.0% | |
| TTCCGCAAAGAATTCATCAA+AGG | + | chr8.1:38590071-38590090 | None:intergenic | 35.0% | |
| TTTATCTCCATTGCAGATTC+CGG | - | chr8.1:38589880-38589899 | MS.gene009080:intron | 35.0% | |
| TTTATTCTCTCCTCAGTGAA+AGG | + | chr8.1:38590256-38590275 | None:intergenic | 35.0% | |
| ! | AGGTATGCATCAATGAGTTT+TGG | + | chr8.1:38589980-38589999 | None:intergenic | 35.0% |
| ! | AGTCGTAAATTCAAGGTATC+TGG | - | chr8.1:38590139-38590158 | MS.gene009080:intron | 35.0% |
| ! | ATGTGATTTTCTCACGGTAT+TGG | - | chr8.1:38587768-38587787 | MS.gene009080:CDS | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr8.1:38589528-38589547 | None:intergenic | 35.0% |
| ! | TAAACTTTTTACCTGATCGC+CGG | + | chr8.1:38587499-38587518 | None:intergenic | 35.0% |
| ! | TCAAACACTTGAGTCAGTTT+TGG | - | chr8.1:38589169-38589188 | MS.gene009080:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr8.1:38589524-38589543 | None:intergenic | 35.0% |
| !! | AAACAAGTTTTGTCCTTGAG+AGG | + | chr8.1:38588969-38588988 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8.1:38589258-38589277 | None:intergenic | 35.0% |
| !! | ATACCTATCTCTGAGATTGA+GGG | - | chr8.1:38588756-38588775 | MS.gene009080:CDS | 35.0% |
| !! | CTTGCATTGATTGATGAAAC+TGG | - | chr8.1:38588430-38588449 | MS.gene009080:intron | 35.0% |
| !! | GAAAACTTTTCAGGAGTGAA+TGG | + | chr8.1:38589113-38589132 | None:intergenic | 35.0% |
| !! | TATTTTTCAGCATCATGGTG+TGG | - | chr8.1:38588196-38588215 | MS.gene009080:intron | 35.0% |
| !!! | TGAGTTTTGGAAGAAACTCA+CGG | + | chr8.1:38589967-38589986 | None:intergenic | 35.0% |
| AACGGAGGGAGTAGTTAATA+AGG | - | chr8.1:38589677-38589696 | MS.gene009080:intron | 40.0% | |
| AATTCTTTGCGGAAATGCCA+TGG | - | chr8.1:38590077-38590096 | MS.gene009080:intron | 40.0% | |
| AGAGACCAATATCGATCTCA+AGG | + | chr8.1:38588578-38588597 | None:intergenic | 40.0% | |
| AGATGCTTATCCTTTCACTG+AGG | - | chr8.1:38590243-38590262 | MS.gene009080:intron | 40.0% | |
| AGCTTGAAGGGAAAGAAACT+TGG | - | chr8.1:38588169-38588188 | MS.gene009080:intron | 40.0% | |
| AGTGTCTCTGAATCAGAAAG+TGG | + | chr8.1:38588367-38588386 | None:intergenic | 40.0% | |
| ATCACAAACCCATCCATCTT+TGG | + | chr8.1:38590320-38590339 | None:intergenic | 40.0% | |
| ATCCTCCAGTTCCATATTCA+CGG | + | chr8.1:38588489-38588508 | None:intergenic | 40.0% | |
| ATCTGGCCCAATAACAACAA+AGG | + | chr8.1:38589030-38589049 | None:intergenic | 40.0% | |
| CATTGAGAAAGATGGGAAGA+AGG | - | chr8.1:38589214-38589233 | MS.gene009080:CDS | 40.0% | |
| CGAAGAAGAAAGTCTCTATC+GGG | + | chr8.1:38587471-38587490 | None:intergenic | 40.0% | |
| GACTCTTCGTCATCATCTAA+GGG | + | chr8.1:38588906-38588925 | None:intergenic | 40.0% | |
| GACTTTCTTCTTCGAAACAC+CGG | - | chr8.1:38587477-38587496 | MS.gene009080:CDS | 40.0% | |
| GGAGGTTTACAAAAACCTGA+AGG | - | chr8.1:38588848-38588867 | MS.gene009080:CDS | 40.0% | |
| GGATGATATCACAAAGTCAC+AGG | + | chr8.1:38588605-38588624 | None:intergenic | 40.0% | |
| GTATCTGTTGTGCACATGAA+AGG | + | chr8.1:38588740-38588759 | None:intergenic | 40.0% | |
| GTGTCTCTGAATCAGAAAGT+GGG | + | chr8.1:38588366-38588385 | None:intergenic | 40.0% | |
| GTGTGCTGAGTATTAATTGG+AGG | + | chr8.1:38589360-38589379 | None:intergenic | 40.0% | |
| TACAATGAACTCTCTCCCAA+GGG | - | chr8.1:38588256-38588275 | MS.gene009080:intron | 40.0% | |
| TCACAAACCCATCCATCTTT+GGG | + | chr8.1:38590319-38590338 | None:intergenic | 40.0% | |
| TGACTCTTCGTCATCATCTA+AGG | + | chr8.1:38588907-38588926 | None:intergenic | 40.0% | |
| TGATGAAATAGCAAAGGCCA+AGG | - | chr8.1:38589139-38589158 | MS.gene009080:intron | 40.0% | |
| TTCTCCTTTAATTCCGACAC+CGG | + | chr8.1:38589902-38589921 | None:intergenic | 40.0% | |
| TTTCCCTCAATCTCAGAGAT+AGG | + | chr8.1:38588762-38588781 | None:intergenic | 40.0% | |
| ! | AAAGATGGATGGGTTTGTGA+TGG | - | chr8.1:38590319-38590338 | MS.gene009080:CDS | 40.0% |
| ! | AAGAATTAGAAAGCGTGCCT+TGG | - | chr8.1:38588934-38588953 | MS.gene009080:CDS | 40.0% |
| ! | AGAATTAGAAAGCGTGCCTT+GGG | - | chr8.1:38588935-38588954 | MS.gene009080:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr8.1:38589525-38589544 | None:intergenic | 40.0% |
| ! | TCTTTTCTCGAGTCACCAAA+GGG | + | chr8.1:38590112-38590131 | None:intergenic | 40.0% |
| ! | TTCTTTTCTCGAGTCACCAA+AGG | + | chr8.1:38590113-38590132 | None:intergenic | 40.0% |
| ! | TTGTTGTTATTGGGCCAGAT+GGG | - | chr8.1:38589030-38589049 | MS.gene009080:intron | 40.0% |
| !! | ACTACTTTTCCAAGATGCCA+TGG | - | chr8.1:38588332-38588351 | MS.gene009080:intron | 40.0% |
| !! | GATACCTATCTCTGAGATTG+AGG | - | chr8.1:38588755-38588774 | MS.gene009080:CDS | 40.0% |
| !! | TCCCCTCCTTTGTTGTTATT+GGG | - | chr8.1:38589021-38589040 | MS.gene009080:intron | 40.0% |
| !! | TTTGTTGTTATTGGGCCAGA+TGG | - | chr8.1:38589029-38589048 | MS.gene009080:intron | 40.0% |
| !!! | AACGACTCATTTTGAAACGG+AGG | - | chr8.1:38589770-38589789 | MS.gene009080:intron | 40.0% |
| !!! | ACGACTCATTTTGAAACGGA+GGG | - | chr8.1:38589771-38589790 | MS.gene009080:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.1:38589663-38589682 | MS.gene009080:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8.1:38589682-38589663 | None:intergenic | 40.0% |
| AACAACCTCAAAGTCACCCT+TGG | + | chr8.1:38588275-38588294 | None:intergenic | 45.0% | |
| ACAACCTCAAAGTCACCCTT+GGG | + | chr8.1:38588274-38588293 | None:intergenic | 45.0% | |
| AGACAATGATGCGCTTGAAG+TGG | - | chr8.1:38590015-38590034 | MS.gene009080:intron | 45.0% | |
| AGAGAAGCCCAAAGATGGAT+GGG | - | chr8.1:38590309-38590328 | MS.gene009080:CDS | 45.0% | |
| ATCATTCACTCCAACGTTGG+TGG | - | chr8.1:38588228-38588247 | MS.gene009080:intron | 45.0% | |
| ATCCGTGAATATGGAACTGG+AGG | - | chr8.1:38588484-38588503 | MS.gene009080:intron | 45.0% | |
| ATCTCTAGTGACAGGGATCA+AGG | - | chr8.1:38590043-38590062 | MS.gene009080:intron | 45.0% | |
| ATGATCCTCAATGGCATCAG+CGG | + | chr8.1:38589075-38589094 | None:intergenic | 45.0% | |
| CCAATATCGATCTCAAGGAC+TGG | + | chr8.1:38588573-38588592 | None:intergenic | 45.0% | |
| CCAGTCCTTGAGATCGATAT+TGG | - | chr8.1:38588570-38588589 | MS.gene009080:CDS | 45.0% | |
| CTGATGCCATTGAGGATCAT+GGG | - | chr8.1:38589075-38589094 | MS.gene009080:intron | 45.0% | |
| GAGATTGAGGGAAAGACAGT+TGG | - | chr8.1:38588768-38588787 | MS.gene009080:CDS | 45.0% | |
| GCCCAATAACAACAAAGGAG+GGG | + | chr8.1:38589025-38589044 | None:intergenic | 45.0% | |
| GGAAAATGGGGAGAACTTTG+AGG | - | chr8.1:38588869-38588888 | MS.gene009080:CDS | 45.0% | |
| GGCCCAATAACAACAAAGGA+GGG | + | chr8.1:38589026-38589045 | None:intergenic | 45.0% | |
| GGGAAAGTTGTTACCGAAGA+TGG | - | chr8.1:38588451-38588470 | MS.gene009080:intron | 45.0% | |
| GGTCTTCATCTCTAGTGACA+GGG | - | chr8.1:38590036-38590055 | MS.gene009080:intron | 45.0% | |
| GTACAATGAACTCTCTCCCA+AGG | - | chr8.1:38588255-38588274 | MS.gene009080:intron | 45.0% | |
| GTCTATCCCATGATCCTCAA+TGG | + | chr8.1:38589084-38589103 | None:intergenic | 45.0% | |
| GTTGGAGTGAATGATCGACA+CGG | + | chr8.1:38588223-38588242 | None:intergenic | 45.0% | |
| TCGATCATTCACTCCAACGT+TGG | - | chr8.1:38588225-38588244 | MS.gene009080:intron | 45.0% | |
| TGAAATAGCAAAGGCCAAGG+AGG | - | chr8.1:38589142-38589161 | MS.gene009080:CDS | 45.0% | |
| TGGCCCAATAACAACAAAGG+AGG | + | chr8.1:38589027-38589046 | None:intergenic | 45.0% | |
| TGGTCTTCATCTCTAGTGAC+AGG | - | chr8.1:38590035-38590054 | MS.gene009080:intron | 45.0% | |
| TTTGGAAGAAACTCACGGCA+TGG | + | chr8.1:38589962-38589981 | None:intergenic | 45.0% | |
| ! | AAGTGTTTGAGATGCCTCCT+TGG | + | chr8.1:38589159-38589178 | None:intergenic | 45.0% |
| ! | AGTTCTCCCCATTTTCCTTC+AGG | + | chr8.1:38588866-38588885 | None:intergenic | 45.0% |
| ! | GATTCCGGTGTCGGAATTAA+AGG | - | chr8.1:38589895-38589914 | MS.gene009080:intron | 45.0% |
| ! | GGATGAAGAGTTTTCCCATC+TGG | + | chr8.1:38589047-38589066 | None:intergenic | 45.0% |
| !! | AGTTTTGTCCTTGAGAGGCA+AGG | + | chr8.1:38588964-38588983 | None:intergenic | 45.0% |
| !! | CTCCCCTCCTTTGTTGTTAT+TGG | - | chr8.1:38589020-38589039 | MS.gene009080:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.1:38589662-38589681 | MS.gene009080:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8.1:38589681-38589662 | None:intergenic | 45.0% |
| !!! | CTTGAGTCAGTTTTGGTGTC+TGG | - | chr8.1:38589176-38589195 | MS.gene009080:CDS | 45.0% |
| AAAGAGGCTCGAGATCTGGT+TGG | - | chr8.1:38590208-38590227 | MS.gene009080:intron | 50.0% | |
| AAGAGGCTCGAGATCTGGTT+GGG | - | chr8.1:38590209-38590228 | MS.gene009080:intron | 50.0% | |
| AGATCTGGTTGGGCTCTATG+GGG | - | chr8.1:38590219-38590238 | MS.gene009080:intron | 50.0% | |
| AGTCTCTATCGGGAGAAGAG+AGG | + | chr8.1:38587461-38587480 | None:intergenic | 50.0% | |
| ATCTGGCATTCCCAAGCTTG+TGG | - | chr8.1:38590156-38590175 | MS.gene009080:intron | 50.0% | |
| ATTCCCAAGCTTGTGGCGAT+CGG | - | chr8.1:38590163-38590182 | MS.gene009080:intron | 50.0% | |
| GAAGGAGAGAAGCCCAAAGA+TGG | - | chr8.1:38590304-38590323 | MS.gene009080:CDS | 50.0% | |
| GAGAGAAGCCCAAAGATGGA+TGG | - | chr8.1:38590308-38590327 | MS.gene009080:CDS | 50.0% | |
| GAGATCTGGTTGGGCTCTAT+GGG | - | chr8.1:38590218-38590237 | MS.gene009080:intron | 50.0% | |
| GCACAAAAAGCTGCCAAGGA+AGG | - | chr8.1:38590286-38590305 | MS.gene009080:CDS | 50.0% | |
| GCTGATGCCATTGAGGATCA+TGG | - | chr8.1:38589074-38589093 | MS.gene009080:intron | 50.0% | |
| TAATGCCGCTGATGCCATTG+AGG | - | chr8.1:38589067-38589086 | MS.gene009080:intron | 50.0% | |
| TCAATGGCATCAGCGGCATT+AGG | + | chr8.1:38589068-38589087 | None:intergenic | 50.0% | |
| TCCATTGCAGATTCCGGTGT+CGG | - | chr8.1:38589886-38589905 | MS.gene009080:intron | 50.0% | |
| TTGAGAGGCAAGGATACCCA+AGG | + | chr8.1:38588954-38588973 | None:intergenic | 50.0% | |
| TTGGGTATCCTTGCCTCTCA+AGG | - | chr8.1:38588953-38588972 | MS.gene009080:CDS | 50.0% | |
| TTGTACACCTCCACCAACGT+TGG | + | chr8.1:38588241-38588260 | None:intergenic | 50.0% | |
| TTTGGGCTTCTCTCCTTCCT+TGG | + | chr8.1:38590302-38590321 | None:intergenic | 50.0% | |
| ! | AGAGGCACAAAAAGCTGCCA+AGG | - | chr8.1:38590282-38590301 | MS.gene009080:CDS | 50.0% |
| ! | ATTCACTCCAACGTTGGTGG+AGG | - | chr8.1:38588231-38588250 | MS.gene009080:intron | 50.0% |
| ! | CTTTTCCAAGATGCCATGGC+TGG | - | chr8.1:38588336-38588355 | MS.gene009080:intron | 50.0% |
| ! | GTCAGTGTCGGATACGTACA+CGG | + | chr8.1:38587719-38587738 | None:intergenic | 50.0% |
| ACCTATGAAACACGGACGCG+CGG | + | chr8.1:38587881-38587900 | None:intergenic | 55.0% | |
| CACGAAAGAGGCTCGAGATC+TGG | - | chr8.1:38590204-38590223 | MS.gene009080:intron | 55.0% | |
| CGAGATCTGGTTGGGCTCTA+TGG | - | chr8.1:38590217-38590236 | MS.gene009080:intron | 55.0% | |
| CTCTCCCAAGGGTGACTTTG+AGG | - | chr8.1:38588267-38588286 | MS.gene009080:intron | 55.0% | |
| CTTTGCGGAAATGCCATGGC+TGG | - | chr8.1:38590081-38590100 | MS.gene009080:intron | 55.0% | |
| GAAAGTGGGATAGCCAGCCA+TGG | + | chr8.1:38588352-38588371 | None:intergenic | 55.0% | |
| GAGCCTCTTTCGTGACAGTC+AGG | + | chr8.1:38590198-38590217 | None:intergenic | 55.0% | |
| GATAGCCAGCCATGGCATCT+TGG | + | chr8.1:38588344-38588363 | None:intergenic | 55.0% | |
| GGAAGAAACTCACGGCATGG+AGG | + | chr8.1:38589959-38589978 | None:intergenic | 55.0% | |
| TCCGACACCGGAATCTGCAA+TGG | + | chr8.1:38589890-38589909 | None:intergenic | 55.0% | |
| TCCTCTACTTCTCAGCCCAC+TGG | - | chr8.1:38589930-38589949 | MS.gene009080:intron | 55.0% | |
| TCTTCGAAACACCGGCGATC+AGG | - | chr8.1:38587485-38587504 | MS.gene009080:CDS | 55.0% | |
| TGGCCTGACTGTCACGAAAG+AGG | - | chr8.1:38590192-38590211 | MS.gene009080:intron | 55.0% | |
| TTCGTGACAGTCAGGCCACT+TGG | + | chr8.1:38590190-38590209 | None:intergenic | 55.0% | |
| !! | ACCAGTGGGCTGAGAAGTAG+AGG | + | chr8.1:38589934-38589953 | None:intergenic | 55.0% |
| !! | AGTGGGCTGAGAAGTAGAGG+AGG | + | chr8.1:38589931-38589950 | None:intergenic | 55.0% |
| ACGGCATGGAGGACACCAGT+GGG | + | chr8.1:38589948-38589967 | None:intergenic | 60.0% | |
| CCATGGCTGGCACTTCCCTT+TGG | - | chr8.1:38590094-38590113 | MS.gene009080:intron | 60.0% | |
| CTTGTGGCGATCGGACCAAG+TGG | - | chr8.1:38590172-38590191 | MS.gene009080:intron | 60.0% | |
| GGTCCGATCGCCACAAGCTT+GGG | + | chr8.1:38590169-38590188 | None:intergenic | 60.0% | |
| TCCGCGCGTCCGTGTTTCAT+AGG | - | chr8.1:38587877-38587896 | MS.gene009080:intron | 60.0% | |
| TGGTCCGATCGCCACAAGCT+TGG | + | chr8.1:38590170-38590189 | None:intergenic | 60.0% | |
| !! | CCAAAGGGAAGTGCCAGCCA+TGG | + | chr8.1:38590097-38590116 | None:intergenic | 60.0% |
| CACGGCATGGAGGACACCAG+TGG | + | chr8.1:38589949-38589968 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 38587414 | 38590363 | 38587414 | ID=MS.gene009080 |
| chr8.1 | mRNA | 38587414 | 38590363 | 38587414 | ID=MS.gene009080.t1;Parent=MS.gene009080 |
| chr8.1 | exon | 38590271 | 38590363 | 38590271 | ID=MS.gene009080.t1.exon1;Parent=MS.gene009080.t1 |
| chr8.1 | CDS | 38590271 | 38590363 | 38590271 | ID=cds.MS.gene009080.t1;Parent=MS.gene009080.t1 |
| chr8.1 | exon | 38589141 | 38589620 | 38589141 | ID=MS.gene009080.t1.exon2;Parent=MS.gene009080.t1 |
| chr8.1 | CDS | 38589141 | 38589620 | 38589141 | ID=cds.MS.gene009080.t1;Parent=MS.gene009080.t1 |
| chr8.1 | exon | 38588542 | 38589021 | 38588542 | ID=MS.gene009080.t1.exon3;Parent=MS.gene009080.t1 |
| chr8.1 | CDS | 38588542 | 38589021 | 38588542 | ID=cds.MS.gene009080.t1;Parent=MS.gene009080.t1 |
| chr8.1 | exon | 38587414 | 38587881 | 38587414 | ID=MS.gene009080.t1.exon4;Parent=MS.gene009080.t1 |
| chr8.1 | CDS | 38587414 | 38587881 | 38587414 | ID=cds.MS.gene009080.t1;Parent=MS.gene009080.t1 |
| Gene Sequence |
| Protein sequence |
