Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59310.t1 | XP_003589583.2 | 96.8 | 317 | 8 | 2 | 3 | 318 | 166 | 481 | 1.80E-164 | 588.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59310.t1 | P0CT30 | 43.6 | 117 | 65 | 1 | 18 | 134 | 105 | 220 | 9.3e-21 | 102.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59310.t1 | G7I8F3 | 96.8 | 317 | 8 | 2 | 3 | 318 | 166 | 481 | 1.3e-164 | 588.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049850 | MS.gene59310 | 0.820981 | 5.15E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene59310 | 0.832892 | 7.29E-56 | -1.69E-46 |
| MS.gene050237 | MS.gene59310 | 0.8002 | 1.61E-48 | -1.69E-46 |
| MS.gene050750 | MS.gene59310 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene050953 | MS.gene59310 | 0.800425 | 1.45E-48 | -1.69E-46 |
| MS.gene051265 | MS.gene59310 | 0.801694 | 7.98E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene59310 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene59310 | 0.826154 | 3.17E-54 | -1.69E-46 |
| MS.gene052561 | MS.gene59310 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene59310 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene052584 | MS.gene59310 | 0.810487 | 1.13E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene59310 | 0.802924 | 4.45E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene59310 | 0.80152 | 8.66E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene59310 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene59310 | 0.800248 | 1.58E-48 | -1.69E-46 |
| MS.gene053883 | MS.gene59310 | 0.810996 | 8.73E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene59310 | 0.837938 | 3.87E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene59310 | 0.840034 | 1.11E-57 | -1.69E-46 |
| MS.gene05423 | MS.gene59310 | 0.819671 | 1.03E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene59310 | 0.801633 | 8.21E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene59310 | 0.810644 | 1.04E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene59310 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene59310 | 0.849234 | 3.69E-60 | -1.69E-46 |
| MS.gene056050 | MS.gene59310 | 0.814647 | 1.39E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene59310 | 0.806312 | 8.75E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene59310 | 0.82259 | 2.18E-53 | -1.69E-46 |
| MS.gene056366 | MS.gene59310 | 0.805376 | 1.38E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene59310 | 0.831687 | 1.45E-55 | -1.69E-46 |
| MS.gene057414 | MS.gene59310 | 0.800703 | 1.27E-48 | -1.69E-46 |
| MS.gene057598 | MS.gene59310 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene59310 | 0.800351 | 1.50E-48 | -1.69E-46 |
| MS.gene058010 | MS.gene59310 | 0.813972 | 1.95E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene59310 | 0.815226 | 1.03E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene59310 | 0.814332 | 1.63E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene59310 | 0.811876 | 5.62E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene59310 | 0.822039 | 2.93E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene59310 | -0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene59310 | 0.808857 | 2.52E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69681 | MS.gene59310 | PPI |
| MS.gene59310 | MS.gene73119 | PPI |
| MS.gene59310 | MS.gene64023 | PPI |
| MS.gene59310 | MS.gene69677 | PPI |
| MS.gene009084 | MS.gene59310 | PPI |
| MS.gene035805 | MS.gene59310 | PPI |
| MS.gene009083 | MS.gene59310 | PPI |
| MS.gene65567 | MS.gene59310 | PPI |
| MS.gene24136 | MS.gene59310 | PPI |
| MS.gene65563 | MS.gene59310 | PPI |
| MS.gene009080 | MS.gene59310 | PPI |
| MS.gene59310 | MS.gene27084 | PPI |
| MS.gene038526 | MS.gene59310 | PPI |
| MS.gene64024 | MS.gene59310 | PPI |
| MS.gene59310 | MS.gene69678 | PPI |
| MS.gene59310 | MS.gene64225 | PPI |
| MS.gene65568 | MS.gene59310 | PPI |
| MS.gene064542 | MS.gene59310 | PPI |
| MS.gene59310 | MS.gene038531 | PPI |
| MS.gene038530 | MS.gene59310 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59310.t1 | MTR_1g030300 | 96.845 | 317 | 8 | 2 | 3 | 318 | 166 | 481 | 0.0 | 627 |
| MS.gene59310.t1 | MTR_5g012030 | 38.739 | 111 | 67 | 1 | 17 | 127 | 1 | 110 | 2.35e-18 | 85.9 |
| MS.gene59310.t1 | MTR_5g012030 | 30.973 | 113 | 77 | 1 | 16 | 128 | 390 | 501 | 9.97e-12 | 65.9 |
| MS.gene59310.t1 | MTR_3g452710 | 34.711 | 121 | 78 | 1 | 18 | 138 | 11 | 130 | 6.73e-18 | 84.3 |
| MS.gene59310.t1 | MTR_3g452710 | 34.711 | 121 | 78 | 1 | 18 | 138 | 11 | 130 | 7.54e-18 | 84.3 |
| MS.gene59310.t1 | MTR_5g063200 | 39.326 | 89 | 54 | 0 | 19 | 107 | 212 | 300 | 6.41e-15 | 75.9 |
| MS.gene59310.t1 | MTR_8g107280 | 38.889 | 126 | 73 | 2 | 6 | 128 | 467 | 591 | 9.59e-15 | 75.1 |
| MS.gene59310.t1 | MTR_3g074230 | 35.135 | 111 | 65 | 1 | 4 | 107 | 170 | 280 | 3.35e-13 | 70.5 |
| MS.gene59310.t1 | MTR_3g074230 | 35.135 | 111 | 65 | 1 | 4 | 107 | 170 | 280 | 3.51e-13 | 70.5 |
| MS.gene59310.t1 | MTR_3g087480 | 32.540 | 126 | 85 | 0 | 19 | 144 | 223 | 348 | 3.87e-13 | 70.1 |
| MS.gene59310.t1 | MTR_1g084100 | 37.615 | 109 | 64 | 3 | 18 | 125 | 91 | 196 | 2.93e-12 | 67.4 |
| MS.gene59310.t1 | MTR_4g094205 | 35.433 | 127 | 75 | 2 | 1 | 121 | 465 | 590 | 8.18e-12 | 66.2 |
| MS.gene59310.t1 | MTR_2g078020 | 35.644 | 101 | 65 | 0 | 19 | 119 | 222 | 322 | 1.06e-11 | 65.9 |
| MS.gene59310.t1 | MTR_2g078020 | 35.644 | 101 | 65 | 0 | 19 | 119 | 222 | 322 | 1.36e-11 | 65.9 |
| MS.gene59310.t1 | MTR_1g041435 | 30.657 | 137 | 93 | 2 | 20 | 156 | 13 | 147 | 2.96e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59310.t1 | AT4G08320 | 56.349 | 252 | 97 | 7 | 1 | 244 | 158 | 404 | 3.13e-84 | 260 |
| MS.gene59310.t1 | AT4G08320 | 56.972 | 251 | 96 | 7 | 1 | 243 | 158 | 404 | 2.86e-80 | 250 |
| MS.gene59310.t1 | AT2G42810 | 39.496 | 119 | 71 | 1 | 18 | 136 | 13 | 130 | 3.49e-20 | 91.3 |
| MS.gene59310.t1 | AT2G42810 | 39.496 | 119 | 71 | 1 | 18 | 136 | 13 | 130 | 3.49e-20 | 91.3 |
| MS.gene59310.t1 | AT2G42810 | 39.496 | 119 | 71 | 1 | 18 | 136 | 13 | 130 | 3.49e-20 | 91.3 |
| MS.gene59310.t1 | AT2G42810 | 38.843 | 121 | 73 | 1 | 18 | 138 | 13 | 132 | 3.51e-20 | 91.3 |
| MS.gene59310.t1 | AT2G42810 | 39.496 | 119 | 71 | 1 | 18 | 136 | 13 | 130 | 3.63e-20 | 91.3 |
| MS.gene59310.t1 | AT4G12400 | 38.739 | 111 | 67 | 1 | 17 | 127 | 1 | 110 | 7.52e-19 | 87.4 |
| MS.gene59310.t1 | AT4G12400 | 38.739 | 111 | 67 | 1 | 17 | 127 | 1 | 110 | 8.33e-19 | 87.4 |
| MS.gene59310.t1 | AT1G12270 | 34.426 | 122 | 79 | 1 | 17 | 138 | 1 | 121 | 3.20e-15 | 76.6 |
| MS.gene59310.t1 | AT1G62740 | 32.432 | 111 | 74 | 1 | 17 | 127 | 1 | 110 | 1.63e-14 | 74.3 |
| MS.gene59310.t1 | AT1G62740 | 31.858 | 113 | 76 | 1 | 16 | 128 | 380 | 491 | 1.21e-12 | 68.9 |
| MS.gene59310.t1 | AT1G04190 | 31.884 | 138 | 92 | 2 | 19 | 156 | 16 | 151 | 4.93e-14 | 72.0 |
| MS.gene59310.t1 | AT5G09420 | 37.607 | 117 | 68 | 2 | 18 | 134 | 488 | 599 | 1.01e-13 | 72.0 |
| MS.gene59310.t1 | AT3G17970 | 37.931 | 116 | 71 | 1 | 6 | 121 | 462 | 576 | 1.27e-13 | 71.6 |
| MS.gene59310.t1 | AT2G42580 | 39.080 | 87 | 53 | 0 | 19 | 105 | 221 | 307 | 9.18e-12 | 66.2 |
| MS.gene59310.t1 | AT5G12430 | 40.698 | 86 | 47 | 1 | 21 | 102 | 882 | 967 | 3.20e-11 | 64.7 |
Find 78 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTATGCCTTACTGTAATT+TGG | 0.182831 | 1.3:-16135595 | None:intergenic |
| GCAAGATTGCTGGGGTTAAA+TGG | 0.251602 | 1.3:-16137074 | None:intergenic |
| AGTCTGTTAAAGAAAATATA+AGG | 0.252895 | 1.3:+16136156 | MS.gene59310:CDS |
| TACAGAGATGCTATTGATAA+AGG | 0.286696 | 1.3:+16135652 | MS.gene59310:CDS |
| GGCGGCTGCAAATGCGGGTC+AGG | 0.290209 | 1.3:+16137109 | MS.gene59310:CDS |
| GCTGTTCAATTTGAAGAATT+TGG | 0.306867 | 1.3:+16134111 | MS.gene59310:CDS |
| TTCTTGATCCCCTTGTATAA+TGG | 0.330386 | 1.3:-16137019 | None:intergenic |
| GGCTTCGTTATCTTCACTAT+TGG | 0.331525 | 1.3:-16137336 | None:intergenic |
| CATGCAGCTCCGGCTTCATT+TGG | 0.338679 | 1.3:+16137044 | MS.gene59310:CDS |
| ATGAACCGGAAATTCGATTT+GGG | 0.344456 | 1.3:+16137180 | MS.gene59310:CDS |
| TTCATTAGCTCCACTACTAT+TGG | 0.357311 | 1.3:-16137162 | None:intergenic |
| AATGAACCGGAAATTCGATT+TGG | 0.360726 | 1.3:+16137179 | MS.gene59310:CDS |
| GTTCCTGAGGAATTTGATCT+TGG | 0.372280 | 1.3:-16137220 | None:intergenic |
| TATCTTTGCAGCCTTGCAAT+TGG | 0.381089 | 1.3:+16136121 | MS.gene59310:intron |
| AATGATTAGATAGCTTAGTT+TGG | 0.384520 | 1.3:-16137503 | None:intergenic |
| AACGAAGCCGATATTCAATT+CGG | 0.400107 | 1.3:+16137350 | MS.gene59310:CDS |
| AATGTGATGGAGATGTTATC+AGG | 0.401146 | 1.3:+16137431 | MS.gene59310:CDS |
| CGATAGATCTGAGAGAATCT+TGG | 0.412448 | 1.3:-16135564 | None:intergenic |
| ATCAAGAAGCCATGCAGCTC+CGG | 0.413860 | 1.3:+16137034 | MS.gene59310:CDS |
| ACGAAGCCGATATTCAATTC+GGG | 0.415294 | 1.3:+16137351 | MS.gene59310:CDS |
| CAATCTTGCAAGCATGTTCA+TGG | 0.420391 | 1.3:+16137088 | MS.gene59310:CDS |
| ACAGAGATGCTATTGATAAA+GGG | 0.425713 | 1.3:+16135653 | MS.gene59310:CDS |
| GCGGCTGCAAATGCGGGTCA+GGG | 0.428666 | 1.3:+16137110 | MS.gene59310:CDS |
| GTTCATGGCGGCTGCAAATG+CGG | 0.429486 | 1.3:+16137103 | MS.gene59310:CDS |
| CAGTAAGGCATACAGTCGTC+TGG | 0.431946 | 1.3:+16135603 | MS.gene59310:CDS |
| GAACATGCTTGCAAGATTGC+TGG | 0.438892 | 1.3:-16137084 | None:intergenic |
| TTCTTTAACAGACTCATTGT+TGG | 0.444055 | 1.3:-16136147 | None:intergenic |
| GTGCTGTTTACTACTGCAAC+AGG | 0.445785 | 1.3:+16134504 | MS.gene59310:CDS |
| TCTTTAACAGACTCATTGTT+GGG | 0.449540 | 1.3:-16136146 | None:intergenic |
| GTCTGTTAAAGAAAATATAA+GGG | 0.450970 | 1.3:+16136157 | MS.gene59310:CDS |
| TTCATGGCGGCTGCAAATGC+GGG | 0.459741 | 1.3:+16137104 | MS.gene59310:CDS |
| TTATCAGGGAATGCACCTCC+TGG | 0.482324 | 1.3:+16137446 | MS.gene59310:CDS |
| CTTTCATTCGTTTGATCATG+TGG | 0.485673 | 1.3:-16137473 | None:intergenic |
| ATTTGATCATGCGGTTGCCC+AGG | 0.488809 | 1.3:-16137293 | None:intergenic |
| ATCTGCTTCTATGCAGGAGA+TGG | 0.495034 | 1.3:+16134072 | None:intergenic |
| AATTGCATCAAAGTACTGCT+TGG | 0.501271 | 1.3:-16134444 | None:intergenic |
| TAGTAGTGGAGCTAATGAAC+CGG | 0.501612 | 1.3:+16137166 | MS.gene59310:CDS |
| CATATGCATCACGGATTGAA+AGG | 0.505105 | 1.3:-16137252 | None:intergenic |
| GGCATTGAGCCAAATGAAGC+CGG | 0.511221 | 1.3:-16137053 | None:intergenic |
| AACATGCTTGCAAGATTGCT+GGG | 0.515017 | 1.3:-16137083 | None:intergenic |
| ATCCCCTTGTATAATGGTGT+TGG | 0.519179 | 1.3:-16137013 | None:intergenic |
| CAACCGCATGATCAAATGAA+TGG | 0.519572 | 1.3:+16137299 | MS.gene59310:CDS |
| ACATCGTGCAGATCACAATC+AGG | 0.521432 | 1.3:+16136291 | MS.gene59310:CDS |
| CTTCCATTCATTTGATCATG+CGG | 0.523198 | 1.3:-16137302 | None:intergenic |
| CGGCTGCAAATGCGGGTCAG+GGG | 0.529279 | 1.3:+16137111 | MS.gene59310:CDS |
| CAAATTCCTCAGGAACTAAG+AGG | 0.537501 | 1.3:+16137227 | MS.gene59310:CDS |
| GTTTGATCATGTGGTTGCCC+AGG | 0.546649 | 1.3:-16137464 | None:intergenic |
| AAATTCTGATCAAATCCCTC+AGG | 0.558105 | 1.3:+16137388 | MS.gene59310:CDS |
| GGTAGCTGAGCATAAACTGA+TGG | 0.558424 | 1.3:+16136261 | MS.gene59310:intron |
| GATTGATCCAAATTACAGTA+AGG | 0.561772 | 1.3:+16135588 | MS.gene59310:CDS |
| AAACCAAGATCAAATTCCTC+AGG | 0.562996 | 1.3:+16137217 | MS.gene59310:CDS |
| CAAGAAGATGCCAATAGTAG+TGG | 0.563887 | 1.3:+16137152 | MS.gene59310:CDS |
| AATTCCAACACCATTATACA+AGG | 0.568670 | 1.3:+16137009 | MS.gene59310:CDS |
| TTTCAGGGAATGCACCTCCT+GGG | 0.570365 | 1.3:+16137276 | MS.gene59310:CDS |
| TGAACCGGAAATTCGATTTG+GGG | 0.574309 | 1.3:+16137181 | MS.gene59310:CDS |
| AGTAAGGCATACAGTCGTCT+GGG | 0.585202 | 1.3:+16135604 | MS.gene59310:CDS |
| CAAATGAAGCCGGAGCTGCA+TGG | 0.592124 | 1.3:-16137043 | None:intergenic |
| TATCAGGGAATGCACCTCCT+GGG | 0.596121 | 1.3:+16137447 | MS.gene59310:CDS |
| GGTTTAGCTTATTATGCACA+AGG | 0.596547 | 1.3:+16135625 | MS.gene59310:CDS |
| CAGGGGTCACATTCTCAAGA+AGG | 0.598453 | 1.3:+16137128 | MS.gene59310:CDS |
| ATGTGATGGAGATGTTATCA+GGG | 0.598519 | 1.3:+16137432 | MS.gene59310:CDS |
| CGAAGCCGATATTCAATTCG+GGG | 0.601355 | 1.3:+16137352 | MS.gene59310:CDS |
| TGATCATGCGGTTGCCCAGG+AGG | 0.603190 | 1.3:-16137290 | None:intergenic |
| TGGTGTCTTTCAAAATGTGA+TGG | 0.607325 | 1.3:+16137418 | MS.gene59310:CDS |
| CAAATCCCTCAGGAACTAAG+TGG | 0.608012 | 1.3:+16137398 | MS.gene59310:CDS |
| CCCTGAAAACATATGCATCA+CGG | 0.617541 | 1.3:-16137261 | None:intergenic |
| ATTGTTGGGATCCAATTGCA+AGG | 0.618606 | 1.3:-16136132 | None:intergenic |
| TTCCAACACCATTATACAAG+GGG | 0.621877 | 1.3:+16137011 | MS.gene59310:CDS |
| AAGGCACCTCTTAGTTCCTG+AGG | 0.622185 | 1.3:-16137233 | None:intergenic |
| GAACCGGAAATTCGATTTGG+GGG | 0.635777 | 1.3:+16137182 | MS.gene59310:CDS |
| AGACACCACTTAGTTCCTGA+GGG | 0.637831 | 1.3:-16137403 | None:intergenic |
| TGATCATGTGGTTGCCCAGG+AGG | 0.644291 | 1.3:-16137461 | None:intergenic |
| AAGACACCACTTAGTTCCTG+AGG | 0.647601 | 1.3:-16137404 | None:intergenic |
| TCAAATTAACAGATATACAG+AGG | 0.654051 | 1.3:+16135537 | MS.gene59310:CDS |
| ATTCCAACACCATTATACAA+GGG | 0.670083 | 1.3:+16137010 | MS.gene59310:CDS |
| TCTTGCAAGCATGTTCATGG+CGG | 0.708564 | 1.3:+16137091 | MS.gene59310:CDS |
| GAAGCCGATATTCAATTCGG+GGG | 0.723079 | 1.3:+16137353 | MS.gene59310:CDS |
| ACATGCTTGCAAGATTGCTG+GGG | 0.724105 | 1.3:-16137082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGAAAAAAAAAAAAG+AGG | + | chr1.3:16135292-16135311 | MS.gene59310:intron | 10.0% |
| !!! | TTTAAATATTTAGTACATTT+TGG | + | chr1.3:16135420-16135439 | MS.gene59310:intron | 10.0% |
| !!! | TTTTCTTTTTTTGTATTTTT+AGG | - | chr1.3:16135283-16135302 | None:intergenic | 10.0% |
| !! | TTTACATTGAATTAACAATA+AGG | - | chr1.3:16135820-16135839 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAAAGAGGTATA+GGG | + | chr1.3:16135299-16135318 | MS.gene59310:intron | 15.0% |
| !!! | CATATCTTTTAAATTTAATG+AGG | + | chr1.3:16136326-16136345 | MS.gene59310:intron | 15.0% |
| !!! | GGTTAAATTGATTTTAATTT+TGG | + | chr1.3:16134320-16134339 | MS.gene59310:intron | 15.0% |
| !!! | TAATTTTGTGAAAAAATTGT+TGG | + | chr1.3:16136637-16136656 | MS.gene59310:intron | 15.0% |
| !! | AGTCTGTTAAAGAAAATATA+AGG | + | chr1.3:16136156-16136175 | MS.gene59310:CDS | 20.0% |
| !! | ATAGTGTAATAAATCACTAA+TGG | - | chr1.3:16136015-16136034 | None:intergenic | 20.0% |
| !! | ATTGATAAAGGGTTTAAAAA+AGG | + | chr1.3:16135664-16135683 | MS.gene59310:CDS | 20.0% |
| !! | CAAATAATATAACTACACTA+TGG | + | chr1.3:16134940-16134959 | MS.gene59310:intron | 20.0% |
| !! | GTCTGTTAAAGAAAATATAA+GGG | + | chr1.3:16136157-16136176 | MS.gene59310:CDS | 20.0% |
| !!! | AATTATTTGGTGAACATATT+TGG | - | chr1.3:16134831-16134850 | None:intergenic | 20.0% |
| !!! | ATTTGTTTCTCACAATTATT+TGG | - | chr1.3:16134844-16134863 | None:intergenic | 20.0% |
| !!! | GAAAAAAAAAAAAGAGGTAT+AGG | + | chr1.3:16135298-16135317 | MS.gene59310:intron | 20.0% |
| !!! | TTTGTATTTTTAGGAGAAAT+TGG | - | chr1.3:16135274-16135293 | None:intergenic | 20.0% |
| ! | AAATTGAAGTCAAAATTCTC+AGG | - | chr1.3:16135758-16135777 | None:intergenic | 25.0% |
| ! | AAATTGTTGGAAAGCAATTA+TGG | + | chr1.3:16136650-16136669 | MS.gene59310:intron | 25.0% |
| ! | AAGGTCAAATCTATCATTAT+AGG | - | chr1.3:16135086-16135105 | None:intergenic | 25.0% |
| ! | ACAAAAGCAAATTGAAACAA+TGG | - | chr1.3:16136939-16136958 | None:intergenic | 25.0% |
| ! | AGAGACATTTATTAGACAAT+TGG | - | chr1.3:16134622-16134641 | None:intergenic | 25.0% |
| ! | AGGTCAAATCTATCATTATA+GGG | - | chr1.3:16135085-16135104 | None:intergenic | 25.0% |
| ! | ATAAAGGGTTTAAAAAAGGT+CGG | + | chr1.3:16135668-16135687 | MS.gene59310:intron | 25.0% |
| ! | ATCATACCAGTCTTAATTAA+TGG | + | chr1.3:16136584-16136603 | MS.gene59310:intron | 25.0% |
| ! | ATGAGAAACACATATATACA+CGG | - | chr1.3:16135347-16135366 | None:intergenic | 25.0% |
| ! | TAATTGTGAGAAACAAATTC+TGG | + | chr1.3:16134846-16134865 | MS.gene59310:intron | 25.0% |
| ! | TATTACATCACATCTGATAA+AGG | - | chr1.3:16136680-16136699 | None:intergenic | 25.0% |
| ! | TCAAATTAACAGATATACAG+AGG | + | chr1.3:16135537-16135556 | MS.gene59310:CDS | 25.0% |
| ! | TCATACCAGTCTTAATTAAT+GGG | + | chr1.3:16136585-16136604 | MS.gene59310:intron | 25.0% |
| ! | TTCTAAATAACTGCGATTTA+TGG | + | chr1.3:16134873-16134892 | MS.gene59310:intron | 25.0% |
| !! | GCATTTTCTGATAAATATCA+GGG | + | chr1.3:16135501-16135520 | MS.gene59310:intron | 25.0% |
| !! | TGCATTTTCTGATAAATATC+AGG | + | chr1.3:16135500-16135519 | MS.gene59310:intron | 25.0% |
| !! | TTGAAATTGAGTTTTTACTC+AGG | + | chr1.3:16134404-16134423 | MS.gene59310:intron | 25.0% |
| !!! | AATTTTAGGATTTTTTGGGA+TGG | + | chr1.3:16134773-16134792 | MS.gene59310:intron | 25.0% |
| !!! | AGGGTAATTTTAGGATTTTT+TGG | + | chr1.3:16134768-16134787 | MS.gene59310:intron | 25.0% |
| !!! | ATATTTAGTACATTTTGGAG+TGG | + | chr1.3:16135425-16135444 | MS.gene59310:intron | 25.0% |
| !!! | ATTTTGACTTCAATTTCATC+TGG | + | chr1.3:16135762-16135781 | MS.gene59310:intron | 25.0% |
| !!! | CTCTTTTTACTTTTTCTATG+TGG | + | chr1.3:16136215-16136234 | MS.gene59310:intron | 25.0% |
| !!! | GGGTAATTTTAGGATTTTTT+GGG | + | chr1.3:16134769-16134788 | MS.gene59310:intron | 25.0% |
| AAACATGCACTTGTAATTGT+AGG | - | chr1.3:16135895-16135914 | None:intergenic | 30.0% | |
| AAACGAACAATAATGCATAG+AGG | - | chr1.3:16136808-16136827 | None:intergenic | 30.0% | |
| AAAGATACGGAATCATGTTA+GGG | - | chr1.3:16136108-16136127 | None:intergenic | 30.0% | |
| AACAATAATGCATAGAGGAA+TGG | - | chr1.3:16136803-16136822 | None:intergenic | 30.0% | |
| AACTAAGTGACTTTGATCTT+GGG | - | chr1.3:16134980-16134999 | None:intergenic | 30.0% | |
| AATTCCAACACCATTATACA+AGG | + | chr1.3:16137009-16137028 | MS.gene59310:CDS | 30.0% | |
| ACAGAGATGCTATTGATAAA+GGG | + | chr1.3:16135653-16135672 | MS.gene59310:CDS | 30.0% | |
| AGTGAAATTGAAGAGATTGT+TGG | - | chr1.3:16135056-16135075 | None:intergenic | 30.0% | |
| ATAATGCTCTTGTTAATCAC+AGG | + | chr1.3:16136240-16136259 | MS.gene59310:intron | 30.0% | |
| ATGTGATGTAATACATGATC+TGG | + | chr1.3:16136687-16136706 | MS.gene59310:intron | 30.0% | |
| ATTCCAACACCATTATACAA+GGG | + | chr1.3:16137010-16137029 | MS.gene59310:CDS | 30.0% | |
| CAAATCTATCATTATAGGGA+AGG | - | chr1.3:16135081-16135100 | None:intergenic | 30.0% | |
| GAAAACCCATTAATTAAGAC+TGG | - | chr1.3:16136593-16136612 | None:intergenic | 30.0% | |
| GAAACATAAAAATGCGCATT+AGG | + | chr1.3:16135154-16135173 | MS.gene59310:intron | 30.0% | |
| GATTGATCCAAATTACAGTA+AGG | + | chr1.3:16135588-16135607 | MS.gene59310:CDS | 30.0% | |
| GCTGAATCACTAAAAACATT+AGG | + | chr1.3:16134133-16134152 | MS.gene59310:CDS | 30.0% | |
| GCTGTTCAATTTGAAGAATT+TGG | + | chr1.3:16134111-16134130 | MS.gene59310:CDS | 30.0% | |
| TACAGAGATGCTATTGATAA+AGG | + | chr1.3:16135652-16135671 | MS.gene59310:CDS | 30.0% | |
| TAGAAACCAACATGTAGTAT+TGG | + | chr1.3:16136873-16136892 | MS.gene59310:intron | 30.0% | |
| TCAGGAATACATATCATACT+AGG | + | chr1.3:16136367-16136386 | MS.gene59310:intron | 30.0% | |
| TCCAAGAAAATGAATTGCTA+AGG | - | chr1.3:16135117-16135136 | None:intergenic | 30.0% | |
| TCTTTAACAGACTCATTGTT+GGG | - | chr1.3:16136149-16136168 | None:intergenic | 30.0% | |
| TGAGAAACACATATATACAC+GGG | - | chr1.3:16135346-16135365 | None:intergenic | 30.0% | |
| TGAGAAACAGTATAATCAAG+TGG | - | chr1.3:16134534-16134553 | None:intergenic | 30.0% | |
| TGTTACAAATCAAGGTGAAA+TGG | + | chr1.3:16135785-16135804 | MS.gene59310:intron | 30.0% | |
| TTCTTTAACAGACTCATTGT+TGG | - | chr1.3:16136150-16136169 | None:intergenic | 30.0% | |
| ! | ACCTTAGCAATTCATTTTCT+TGG | + | chr1.3:16135113-16135132 | MS.gene59310:intron | 30.0% |
| ! | AGAGATTTTCGATTCATGAA+GGG | - | chr1.3:16134196-16134215 | None:intergenic | 30.0% |
| ! | AGTTAAATAAACTGGTGCTA+AGG | - | chr1.3:16135472-16135491 | None:intergenic | 30.0% |
| ! | TCATTCTTCAGGGTAATTTT+AGG | + | chr1.3:16134759-16134778 | MS.gene59310:intron | 30.0% |
| !! | AATGCAGTGTAACTTGTTAT+CGG | + | chr1.3:16136896-16136915 | MS.gene59310:intron | 30.0% |
| !!! | TCAAATGTATCCCTTTTTTC+TGG | + | chr1.3:16135370-16135389 | MS.gene59310:intron | 30.0% |
| AAACCAAGATCAAATTCCTC+AGG | + | chr1.3:16137217-16137236 | MS.gene59310:CDS | 35.0% | |
| AAATTCTGATCAAATCCCTC+AGG | + | chr1.3:16137388-16137407 | MS.gene59310:CDS | 35.0% | |
| AACGAAGCCGATATTCAATT+CGG | + | chr1.3:16137350-16137369 | MS.gene59310:CDS | 35.0% | |
| AATGAACCGGAAATTCGATT+TGG | + | chr1.3:16137179-16137198 | MS.gene59310:CDS | 35.0% | |
| AATTGCTAAGGTTGACAAGA+AGG | - | chr1.3:16135105-16135124 | None:intergenic | 35.0% | |
| ACATAAAAATGCGCATTAGG+AGG | + | chr1.3:16135157-16135176 | MS.gene59310:intron | 35.0% | |
| ACATATCATACTAGGAACCT+GGG | + | chr1.3:16136375-16136394 | MS.gene59310:intron | 35.0% | |
| ACCGTCTGATCTCAAATTAA+AGG | - | chr1.3:16136450-16136469 | None:intergenic | 35.0% | |
| ACTAAGTGACTTTGATCTTG+GGG | - | chr1.3:16134979-16134998 | None:intergenic | 35.0% | |
| AGATGCTATGTCATTCTTCA+GGG | + | chr1.3:16134749-16134768 | MS.gene59310:intron | 35.0% | |
| ATGAACCGGAAATTCGATTT+GGG | + | chr1.3:16137180-16137199 | MS.gene59310:CDS | 35.0% | |
| CAAAGATACGGAATCATGTT+AGG | - | chr1.3:16136109-16136128 | None:intergenic | 35.0% | |
| CATAAAAATGCGCATTAGGA+GGG | + | chr1.3:16135158-16135177 | MS.gene59310:intron | 35.0% | |
| CATAGCATCTCACAAAAAAG+TGG | - | chr1.3:16134739-16134758 | None:intergenic | 35.0% | |
| CTGTATGCCTTACTGTAATT+TGG | - | chr1.3:16135598-16135617 | None:intergenic | 35.0% | |
| CTTCCATTCATTTGATCATG+CGG | - | chr1.3:16137305-16137324 | None:intergenic | 35.0% | |
| CTTTCATTCGTTTGATCATG+TGG | - | chr1.3:16137476-16137495 | None:intergenic | 35.0% | |
| GAACTAAGTGACTTTGATCT+TGG | - | chr1.3:16134981-16135000 | None:intergenic | 35.0% | |
| GAGAAACACATATATACACG+GGG | - | chr1.3:16135345-16135364 | None:intergenic | 35.0% | |
| GCACCAGTTTATTTAACTGA+TGG | + | chr1.3:16135474-16135493 | MS.gene59310:intron | 35.0% | |
| GCTCCATCAGTTAAATAAAC+TGG | - | chr1.3:16135480-16135499 | None:intergenic | 35.0% | |
| TAAGACTGGTATGATCAAAG+TGG | - | chr1.3:16136579-16136598 | None:intergenic | 35.0% | |
| TACATATCATACTAGGAACC+TGG | + | chr1.3:16136374-16136393 | MS.gene59310:intron | 35.0% | |
| TATTATACATGCTGTGTGTC+AGG | + | chr1.3:16136349-16136368 | MS.gene59310:intron | 35.0% | |
| TCTATATTTGCACTGCTGAT+TGG | + | chr1.3:16134294-16134313 | MS.gene59310:intron | 35.0% | |
| TCTTGATTGGCGATTTAACT+TGG | + | chr1.3:16135214-16135233 | MS.gene59310:intron | 35.0% | |
| TGCATTCCAATACTACATGT+TGG | - | chr1.3:16136882-16136901 | None:intergenic | 35.0% | |
| TGGTGTCTTTCAAAATGTGA+TGG | + | chr1.3:16137418-16137437 | MS.gene59310:CDS | 35.0% | |
| TGTGAGAAACAAATTCTGGA+AGG | + | chr1.3:16134850-16134869 | MS.gene59310:intron | 35.0% | |
| TTCATTAGCTCCACTACTAT+TGG | - | chr1.3:16137165-16137184 | None:intergenic | 35.0% | |
| TTCCAACACCATTATACAAG+GGG | + | chr1.3:16137011-16137030 | MS.gene59310:CDS | 35.0% | |
| TTCTTGATCCCCTTGTATAA+TGG | - | chr1.3:16137022-16137041 | None:intergenic | 35.0% | |
| TTGAAGTCAAAATTCTCAGG+AGG | - | chr1.3:16135755-16135774 | None:intergenic | 35.0% | |
| ! | AATGTGATGGAGATGTTATC+AGG | + | chr1.3:16137431-16137450 | MS.gene59310:CDS | 35.0% |
| ! | ATGTGATGGAGATGTTATCA+GGG | + | chr1.3:16137432-16137451 | MS.gene59310:CDS | 35.0% |
| ! | CTTGATTGGCGATTTAACTT+GGG | + | chr1.3:16135215-16135234 | MS.gene59310:intron | 35.0% |
| ! | GAGAGATTTTCGATTCATGA+AGG | - | chr1.3:16134197-16134216 | None:intergenic | 35.0% |
| ! | GAGTTTTTACTCAGGTAACA+AGG | + | chr1.3:16134412-16134431 | MS.gene59310:intron | 35.0% |
| ! | GGTTTAGCTTATTATGCACA+AGG | + | chr1.3:16135625-16135644 | MS.gene59310:CDS | 35.0% |
| ! | TATAAGGGTTTGTTCTGTTC+TGG | + | chr1.3:16136172-16136191 | MS.gene59310:intron | 35.0% |
| ! | TTTTACACTGTAGCTGATCT+TGG | + | chr1.3:16136424-16136443 | MS.gene59310:intron | 35.0% |
| !! | AATACATGATCTGGTTCTTG+TGG | + | chr1.3:16136696-16136715 | MS.gene59310:intron | 35.0% |
| !! | AATTGCATCAAAGTACTGCT+TGG | - | chr1.3:16134447-16134466 | None:intergenic | 35.0% |
| !! | CTCAAGAGTATCTTCATTGA+TGG | + | chr1.3:16134358-16134377 | MS.gene59310:intron | 35.0% |
| !! | GCCTTTAATTTGAGATCAGA+CGG | + | chr1.3:16136446-16136465 | MS.gene59310:intron | 35.0% |
| !! | TCATCTGGTGTTACAAATCA+AGG | + | chr1.3:16135777-16135796 | MS.gene59310:intron | 35.0% |
| !!! | AATGTATCCCTTTTTTCTGG+TGG | + | chr1.3:16135373-16135392 | MS.gene59310:intron | 35.0% |
| AACATGCTTGCAAGATTGCT+GGG | - | chr1.3:16137086-16137105 | None:intergenic | 40.0% | |
| AAGTCAAAATTCTCAGGAGG+AGG | - | chr1.3:16135752-16135771 | None:intergenic | 40.0% | |
| ACGAAGCCGATATTCAATTC+GGG | + | chr1.3:16137351-16137370 | MS.gene59310:CDS | 40.0% | |
| ATCCCCTTGTATAATGGTGT+TGG | - | chr1.3:16137016-16137035 | None:intergenic | 40.0% | |
| ATGCAGGAGATGGAAAAATC+TGG | + | chr1.3:16134082-16134101 | MS.gene59310:CDS | 40.0% | |
| ATTGCAAGGCTGCAAAGATA+CGG | - | chr1.3:16136121-16136140 | None:intergenic | 40.0% | |
| ATTGCCCCCGAATTGAATAT+CGG | - | chr1.3:16137360-16137379 | None:intergenic | 40.0% | |
| ATTGTTGGGATCCAATTGCA+AGG | - | chr1.3:16136135-16136154 | None:intergenic | 40.0% | |
| ATTTCCATATTCCAACCAGC+CGG | - | chr1.3:16136053-16136072 | None:intergenic | 40.0% | |
| CAAATTCCTCAGGAACTAAG+AGG | + | chr1.3:16137227-16137246 | MS.gene59310:CDS | 40.0% | |
| CAACCGCATGATCAAATGAA+TGG | + | chr1.3:16137299-16137318 | MS.gene59310:CDS | 40.0% | |
| CAAGAAGATGCCAATAGTAG+TGG | + | chr1.3:16137152-16137171 | MS.gene59310:CDS | 40.0% | |
| CAATCTTGCAAGCATGTTCA+TGG | + | chr1.3:16137088-16137107 | MS.gene59310:CDS | 40.0% | |
| CCCTGAAAACATATGCATCA+CGG | - | chr1.3:16137264-16137283 | None:intergenic | 40.0% | |
| CGATAGATCTGAGAGAATCT+TGG | - | chr1.3:16135567-16135586 | None:intergenic | 40.0% | |
| CTATTATGAGTATCCGATCC+CGG | + | chr1.3:16136031-16136050 | MS.gene59310:intron | 40.0% | |
| GAGATGCTATGTCATTCTTC+AGG | + | chr1.3:16134748-16134767 | MS.gene59310:intron | 40.0% | |
| GAGTGTGTGTGTCAAAAATG+CGG | + | chr1.3:16135180-16135199 | MS.gene59310:intron | 40.0% | |
| GGCTTCGTTATCTTCACTAT+TGG | - | chr1.3:16137339-16137358 | None:intergenic | 40.0% | |
| GTTCCTGAGGAATTTGATCT+TGG | - | chr1.3:16137223-16137242 | None:intergenic | 40.0% | |
| TATCTTTGCAGCCTTGCAAT+TGG | + | chr1.3:16136121-16136140 | MS.gene59310:intron | 40.0% | |
| TATGACTCATGTGAACTGTG+CGG | - | chr1.3:16136759-16136778 | None:intergenic | 40.0% | |
| TGCAGGAGATGGAAAAATCT+GGG | + | chr1.3:16134083-16134102 | MS.gene59310:CDS | 40.0% | |
| TGTCCACATTGTAAGAGAGA+GGG | - | chr1.3:16134225-16134244 | None:intergenic | 40.0% | |
| TGTGTGTGTGTAGTTTCTTG+TGG | + | chr1.3:16134586-16134605 | MS.gene59310:intron | 40.0% | |
| ! | AAAAGAGGTATAGGGAGTGA+TGG | + | chr1.3:16135307-16135326 | MS.gene59310:intron | 40.0% |
| ! | ATTTGCACTGCTGATTGGTT+TGG | + | chr1.3:16134299-16134318 | MS.gene59310:intron | 40.0% |
| ! | CATATGCATCACGGATTGAA+AGG | - | chr1.3:16137255-16137274 | None:intergenic | 40.0% |
| ! | CCGTGATGCATATGTTTTCA+GGG | + | chr1.3:16137261-16137280 | MS.gene59310:CDS | 40.0% |
| ! | TAGTAGTGGAGCTAATGAAC+CGG | + | chr1.3:16137166-16137185 | MS.gene59310:CDS | 40.0% |
| ! | TCCGTGATGCATATGTTTTC+AGG | + | chr1.3:16137260-16137279 | MS.gene59310:CDS | 40.0% |
| ! | TCTTTTTCTCCATCCTCTGA+TGG | + | chr1.3:16135002-16135021 | MS.gene59310:intron | 40.0% |
| ! | TGAACCGGAAATTCGATTTG+GGG | + | chr1.3:16137181-16137200 | MS.gene59310:CDS | 40.0% |
| !! | GGTATTTTGAGCCAGACAAT+TGG | - | chr1.3:16135451-16135470 | None:intergenic | 40.0% |
| AAGACACCACTTAGTTCCTG+AGG | - | chr1.3:16137407-16137426 | None:intergenic | 45.0% | |
| ACATCGTGCAGATCACAATC+AGG | + | chr1.3:16136291-16136310 | MS.gene59310:CDS | 45.0% | |
| ACATGCTTGCAAGATTGCTG+GGG | - | chr1.3:16137085-16137104 | None:intergenic | 45.0% | |
| AGACACCACTTAGTTCCTGA+GGG | - | chr1.3:16137406-16137425 | None:intergenic | 45.0% | |
| AGAGATTGTTGGAGATGCAG+AGG | - | chr1.3:16135045-16135064 | None:intergenic | 45.0% | |
| AGATGGAAAAATCTGGGCGT+GGG | + | chr1.3:16134089-16134108 | MS.gene59310:CDS | 45.0% | |
| AGCAGAGCCACCAGAAAAAA+GGG | - | chr1.3:16135383-16135402 | None:intergenic | 45.0% | |
| AGTAAGGCATACAGTCGTCT+GGG | + | chr1.3:16135604-16135623 | MS.gene59310:CDS | 45.0% | |
| CAAATCCCTCAGGAACTAAG+TGG | + | chr1.3:16137398-16137417 | MS.gene59310:CDS | 45.0% | |
| CGAAGCCGATATTCAATTCG+GGG | + | chr1.3:16137352-16137371 | MS.gene59310:CDS | 45.0% | |
| GAACATGCTTGCAAGATTGC+TGG | - | chr1.3:16137087-16137106 | None:intergenic | 45.0% | |
| GAAGCCGATATTCAATTCGG+GGG | + | chr1.3:16137353-16137372 | MS.gene59310:CDS | 45.0% | |
| GATAGAGCATAGACCATCAG+AGG | - | chr1.3:16135018-16135037 | None:intergenic | 45.0% | |
| GCAAGATTGCTGGGGTTAAA+TGG | - | chr1.3:16137077-16137096 | None:intergenic | 45.0% | |
| GGTAGCTGAGCATAAACTGA+TGG | + | chr1.3:16136261-16136280 | MS.gene59310:intron | 45.0% | |
| GGTGTTCGAATGCTCTTGAT+TGG | + | chr1.3:16135201-16135220 | MS.gene59310:intron | 45.0% | |
| GTGTCCACATTGTAAGAGAG+AGG | - | chr1.3:16134226-16134245 | None:intergenic | 45.0% | |
| TCTCCCTCTCTCTTACAATG+TGG | + | chr1.3:16134219-16134238 | MS.gene59310:intron | 45.0% | |
| TCTTGCAAGCATGTTCATGG+CGG | + | chr1.3:16137091-16137110 | MS.gene59310:CDS | 45.0% | |
| TTGCCCCCAAATCGAATTTC+CGG | - | chr1.3:16137188-16137207 | None:intergenic | 45.0% | |
| TTTCCATATTCCAACCAGCC+GGG | - | chr1.3:16136052-16136071 | None:intergenic | 45.0% | |
| !! | GAACCGGAAATTCGATTTGG+GGG | + | chr1.3:16137182-16137201 | MS.gene59310:CDS | 45.0% |
| !! | GTGCTGTTTACTACTGCAAC+AGG | + | chr1.3:16134504-16134523 | MS.gene59310:CDS | 45.0% |
| !!! | TTTTGGAGTGGCCAATTGTC+TGG | + | chr1.3:16135437-16135456 | MS.gene59310:intron | 45.0% |
| ATATTCCAACCAGCCGGGAT+CGG | - | chr1.3:16136047-16136066 | None:intergenic | 50.0% | |
| ATCAAGAAGCCATGCAGCTC+CGG | + | chr1.3:16137034-16137053 | MS.gene59310:CDS | 50.0% | |
| ATTTGATCATGCGGTTGCCC+AGG | - | chr1.3:16137296-16137315 | None:intergenic | 50.0% | |
| CAGGAGGCTGTAACAGATCT+GGG | - | chr1.3:16136535-16136554 | None:intergenic | 50.0% | |
| CAGGGGTCACATTCTCAAGA+AGG | + | chr1.3:16137128-16137147 | MS.gene59310:CDS | 50.0% | |
| CAGTAAGGCATACAGTCGTC+TGG | + | chr1.3:16135603-16135622 | MS.gene59310:CDS | 50.0% | |
| GAGATGGAAAAATCTGGGCG+TGG | + | chr1.3:16134088-16134107 | MS.gene59310:CDS | 50.0% | |
| GAGCAGAGCCACCAGAAAAA+AGG | - | chr1.3:16135384-16135403 | None:intergenic | 50.0% | |
| GAGCATAGACCATCAGAGGA+TGG | - | chr1.3:16135014-16135033 | None:intergenic | 50.0% | |
| GTTTGATCATGTGGTTGCCC+AGG | - | chr1.3:16137467-16137486 | None:intergenic | 50.0% | |
| TATCAGGGAATGCACCTCCT+GGG | + | chr1.3:16137447-16137466 | MS.gene59310:CDS | 50.0% | |
| TTATCAGGGAATGCACCTCC+TGG | + | chr1.3:16137446-16137465 | MS.gene59310:CDS | 50.0% | |
| TTCCTGCTGCAACTAACAGC+AGG | - | chr1.3:16136554-16136573 | None:intergenic | 50.0% | |
| TTTCAGGGAATGCACCTCCT+GGG | + | chr1.3:16137276-16137295 | MS.gene59310:CDS | 50.0% | |
| ! | AAGGCACCTCTTAGTTCCTG+AGG | - | chr1.3:16137236-16137255 | None:intergenic | 50.0% |
| ! | GGCATTGAGCCAAATGAAGC+CGG | - | chr1.3:16137056-16137075 | None:intergenic | 50.0% |
| !! | CTCAGCCGCTGATTTGAGAT+CGG | + | chr1.3:16136505-16136524 | MS.gene59310:intron | 50.0% |
| !! | TTTTCAGGGAATGCACCTCC+TGG | + | chr1.3:16137275-16137294 | MS.gene59310:CDS | 50.0% |
| !! | TTTTCTGGTGGCTCTGCTCT+GGG | + | chr1.3:16135385-16135404 | MS.gene59310:intron | 50.0% |
| !! | TTTTTCTGGTGGCTCTGCTC+TGG | + | chr1.3:16135384-16135403 | MS.gene59310:intron | 50.0% |
| CAAATGAAGCCGGAGCTGCA+TGG | - | chr1.3:16137046-16137065 | None:intergenic | 55.0% | |
| CATGCAGCTCCGGCTTCATT+TGG | + | chr1.3:16137044-16137063 | MS.gene59310:CDS | 55.0% | |
| CTCCTGCTGTTAGTTGCAGC+AGG | + | chr1.3:16136549-16136568 | MS.gene59310:intron | 55.0% | |
| CTGCTGCAACTAACAGCAGG+AGG | - | chr1.3:16136551-16136570 | None:intergenic | 55.0% | |
| GCAGGAGGCTGTAACAGATC+TGG | - | chr1.3:16136536-16136555 | None:intergenic | 55.0% | |
| GCCGTCCGATCTCAAATCAG+CGG | - | chr1.3:16136513-16136532 | None:intergenic | 55.0% | |
| GTTCATGGCGGCTGCAAATG+CGG | + | chr1.3:16137103-16137122 | MS.gene59310:CDS | 55.0% | |
| TATGAGTATCCGATCCCGGC+TGG | + | chr1.3:16136035-16136054 | MS.gene59310:intron | 55.0% | |
| TGATCATGTGGTTGCCCAGG+AGG | - | chr1.3:16137464-16137483 | None:intergenic | 55.0% | |
| TTCATGGCGGCTGCAAATGC+GGG | + | chr1.3:16137104-16137123 | MS.gene59310:CDS | 55.0% | |
| ! | GATCCCGGCTGGTTGGAATA+TGG | + | chr1.3:16136046-16136065 | MS.gene59310:intron | 55.0% |
| !! | GCCGCTGATTTGAGATCGGA+CGG | + | chr1.3:16136509-16136528 | MS.gene59310:intron | 55.0% |
| AACGCTACAACAGCGAGCCC+AGG | - | chr1.3:16136395-16136414 | None:intergenic | 60.0% | |
| AGTATCCGATCCCGGCTGGT+TGG | + | chr1.3:16136039-16136058 | MS.gene59310:intron | 60.0% | |
| TGATCATGCGGTTGCCCAGG+AGG | - | chr1.3:16137293-16137312 | None:intergenic | 60.0% | |
| CGGCTGCAAATGCGGGTCAG+GGG | + | chr1.3:16137111-16137130 | MS.gene59310:CDS | 65.0% | |
| GCGGCTGCAAATGCGGGTCA+GGG | + | chr1.3:16137110-16137129 | MS.gene59310:CDS | 65.0% | |
| GGCGGCTGCAAATGCGGGTC+AGG | + | chr1.3:16137109-16137128 | MS.gene59310:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 16134082 | 16137511 | 16134082 | ID=MS.gene59310 |
| chr1.3 | mRNA | 16134082 | 16137511 | 16134082 | ID=MS.gene59310.t1;Parent=MS.gene59310 |
| chr1.3 | exon | 16134082 | 16134154 | 16134082 | ID=MS.gene59310.t1.exon1;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16134082 | 16134154 | 16134082 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| chr1.3 | exon | 16134426 | 16134525 | 16134426 | ID=MS.gene59310.t1.exon2;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16134426 | 16134525 | 16134426 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| chr1.3 | exon | 16135522 | 16135685 | 16135522 | ID=MS.gene59310.t1.exon3;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16135522 | 16135685 | 16135522 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| chr1.3 | exon | 16136132 | 16136178 | 16136132 | ID=MS.gene59310.t1.exon4;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16136132 | 16136178 | 16136132 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| chr1.3 | exon | 16136262 | 16136312 | 16136262 | ID=MS.gene59310.t1.exon5;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16136262 | 16136312 | 16136262 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| chr1.3 | exon | 16136990 | 16137511 | 16136990 | ID=MS.gene59310.t1.exon6;Parent=MS.gene59310.t1 |
| chr1.3 | CDS | 16136990 | 16137511 | 16136990 | ID=cds.MS.gene59310.t1;Parent=MS.gene59310.t1 |
| Gene Sequence |
| Protein sequence |
