Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009084.t1 | XP_013445998.1 | 94 | 570 | 34 | 0 | 1 | 570 | 1 | 570 | 0.00E+00 | 1107.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009084.t1 | O80763 | 62.2 | 569 | 209 | 3 | 7 | 570 | 11 | 578 | 1.2e-215 | 750.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009084.t1 | A0A072U2K5 | 94.0 | 570 | 34 | 0 | 1 | 570 | 1 | 570 | 0.0e+00 | 1107.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026627 | MS.gene009084 | PPI |
| MS.gene009084 | MS.gene59310 | PPI |
| MS.gene33593 | MS.gene009084 | PPI |
| MS.gene026628 | MS.gene009084 | PPI |
| MS.gene63007 | MS.gene009084 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009084.t1 | MTR_8g064810 | 94.035 | 570 | 34 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1107 |
| MS.gene009084.t1 | MTR_8g064840 | 85.950 | 484 | 68 | 0 | 1 | 484 | 1 | 484 | 0.0 | 861 |
| MS.gene009084.t1 | MTR_8g064840 | 35.928 | 334 | 211 | 3 | 9 | 340 | 169 | 501 | 3.73e-63 | 216 |
| MS.gene009084.t1 | MTR_8g064840 | 33.702 | 181 | 117 | 2 | 328 | 507 | 8 | 186 | 5.64e-33 | 132 |
| MS.gene009084.t1 | MTR_3g114530 | 41.026 | 390 | 212 | 6 | 175 | 546 | 40 | 429 | 7.56e-97 | 301 |
| MS.gene009084.t1 | MTR_3g114530 | 42.722 | 316 | 166 | 4 | 15 | 315 | 40 | 355 | 1.06e-81 | 262 |
| MS.gene009084.t1 | MTR_3g114530 | 46.452 | 155 | 70 | 4 | 14 | 156 | 203 | 356 | 4.30e-35 | 137 |
| MS.gene009084.t1 | MTR_3g109120 | 38.904 | 365 | 222 | 1 | 175 | 539 | 19 | 382 | 1.81e-96 | 300 |
| MS.gene009084.t1 | MTR_3g109120 | 35.562 | 329 | 207 | 5 | 9 | 335 | 13 | 338 | 1.07e-63 | 214 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009084.t1 | AT1G60420 | 62.105 | 570 | 210 | 3 | 6 | 570 | 10 | 578 | 0.0 | 748 |
| MS.gene009084.t1 | AT4G31240 | 38.482 | 369 | 226 | 1 | 172 | 540 | 17 | 384 | 7.06e-94 | 293 |
| MS.gene009084.t1 | AT4G31240 | 34.810 | 316 | 202 | 4 | 11 | 324 | 16 | 329 | 8.26e-64 | 214 |
| MS.gene009084.t1 | AT4G31240 | 38.482 | 369 | 226 | 1 | 172 | 540 | 17 | 384 | 7.06e-94 | 293 |
| MS.gene009084.t1 | AT4G31240 | 34.810 | 316 | 202 | 4 | 11 | 324 | 16 | 329 | 8.26e-64 | 214 |
Find 144 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGTCTGGTTGGGCTTTA+TGG | 0.070923 | 8.1:-38620125 | MS.gene009084:CDS |
| CTCCCTACCTTGGTTGTTAT+TGG | 0.136370 | 8.1:-38620796 | MS.gene009084:CDS |
| GTTAACATTATCCGTGTTTA+TGG | 0.188673 | 8.1:-38621327 | MS.gene009084:CDS |
| TGACTCTTCTTCATTATCTA+AGG | 0.210482 | 8.1:+38620912 | None:intergenic |
| TCCCGCAAAGAATTCATTAA+AGG | 0.224770 | 8.1:+38620274 | None:intergenic |
| ATCACAAACCCATCCATCTT+TGG | 0.250320 | 8.1:+38619833 | None:intergenic |
| GAGGTCTGGTTGGGCTTTAT+GGG | 0.250764 | 8.1:-38620124 | MS.gene009084:CDS |
| ATCCCCAAGCTCGTGGCAAT+TGG | 0.257472 | 8.1:-38620179 | MS.gene009084:CDS |
| TCCCTACCTTGGTTGTTATT+GGG | 0.259713 | 8.1:-38620795 | MS.gene009084:CDS |
| GGCCCAATTGCCACGAGCTT+GGG | 0.272891 | 8.1:+38620176 | None:intergenic |
| AAAAGCCTCATCATCTTTAT+CGG | 0.320709 | 8.1:+38621497 | None:intergenic |
| TTGTCTCCCAGCGCACAATT+TGG | 0.341919 | 8.1:+38619891 | None:intergenic |
| TGGTATGCCTCAATGAGTTT+TGG | 0.350245 | 8.1:+38620365 | None:intergenic |
| TTTGGGCTTCTCTTCTTCCT+TGG | 0.354126 | 8.1:+38619851 | None:intergenic |
| TCAAACACTTGAGTCAGTTT+TGG | 0.355313 | 8.1:-38620647 | MS.gene009084:CDS |
| ACTATTTAATCAAAAGCTTA+AGG | 0.365290 | 8.1:-38620989 | MS.gene009084:CDS |
| AACAAGCAGATTTCAGGCTT+TGG | 0.367079 | 8.1:+38619797 | None:intergenic |
| GGAGACAAAGGAAGCATAAA+TGG | 0.378642 | 8.1:-38619876 | MS.gene009084:CDS |
| TGGCCCAATTGCCACGAGCT+TGG | 0.380921 | 8.1:+38620175 | None:intergenic |
| AGTCGCAAATTCAAGGTATC+TGG | 0.382318 | 8.1:-38620203 | MS.gene009084:CDS |
| CCATGGCTGGCACTTCCCTT+TGG | 0.383022 | 8.1:-38620248 | MS.gene009084:CDS |
| CCAGTCCTTGAGATCGATAT+TGG | 0.384668 | 8.1:-38621232 | MS.gene009084:CDS |
| GATTCCGGTGTCAGAGTTAG+AGG | 0.388856 | 8.1:-38620447 | MS.gene009084:CDS |
| CTCTCCAAACGGTGACTTTG+AGG | 0.395188 | 8.1:-38621535 | MS.gene009084:CDS |
| TGAGGCATACCATAAGATTA+AGG | 0.395339 | 8.1:-38620354 | MS.gene009084:CDS |
| TCCTTTAATGAATTCTTTGC+GGG | 0.398362 | 8.1:-38620275 | MS.gene009084:CDS |
| TCACAAACCCATCCATCTTT+GGG | 0.399851 | 8.1:+38619834 | None:intergenic |
| GTGAGGATGAGGGAGATAAT+TGG | 0.409851 | 8.1:-38619950 | MS.gene009084:CDS |
| GATGAACTGTTTCATGTAAA+CGG | 0.411174 | 8.1:-38621405 | MS.gene009084:CDS |
| CTTGCATTGCTTGATGAAGC+TGG | 0.412538 | 8.1:-38621372 | MS.gene009084:CDS |
| TCAATGGCCTCAGCGGCATT+AGG | 0.415477 | 8.1:+38620751 | None:intergenic |
| TCTTCGCAACACCGGCGATC+AGG | 0.422776 | 8.1:-38622241 | MS.gene009084:intron |
| GTTTCATGCGTCACCTTCTC+AGG | 0.424121 | 8.1:+38620026 | None:intergenic |
| GGAAAAGTTATTACTGAAGA+TGG | 0.435795 | 8.1:-38621351 | MS.gene009084:CDS |
| ATCCTTTAATGAATTCTTTG+CGG | 0.438767 | 8.1:-38620276 | MS.gene009084:CDS |
| GCTGAGGCCATTGAGGATCA+TGG | 0.439830 | 8.1:-38620742 | MS.gene009084:CDS |
| CGCAATGTTTATTGCTGTGA+TGG | 0.441927 | 8.1:-38619975 | MS.gene009084:CDS |
| AAAAGAAATAGAGGCACAAA+AGG | 0.441932 | 8.1:-38620069 | MS.gene009084:CDS |
| GAGCTTCTTTCGTGACAGTC+TGG | 0.442158 | 8.1:+38620147 | None:intergenic |
| CGAAGAAGAAAGTCTCTATC+AGG | 0.446671 | 8.1:+38622258 | None:intergenic |
| TCCCCAAGCTCGTGGCAATT+GGG | 0.449928 | 8.1:-38620178 | MS.gene009084:CDS |
| AGCTTGAAGGGAAAGAAACT+TGG | 0.454943 | 8.1:-38621633 | MS.gene009084:CDS |
| TCCTCTACTTCTCAGCCCAC+TGG | 0.456326 | 8.1:-38620412 | MS.gene009084:CDS |
| TTCGTGACAGTCTGGCCACT+TGG | 0.457604 | 8.1:+38620155 | None:intergenic |
| CTGAGGCCATTGAGGATCAT+GGG | 0.457780 | 8.1:-38620741 | MS.gene009084:CDS |
| CTGTGATGGTTGTGAGGATG+AGG | 0.458196 | 8.1:-38619961 | MS.gene009084:CDS |
| TTTCCCTCAAGCTCAGAGAT+AGG | 0.462545 | 8.1:+38621057 | None:intergenic |
| CACGAAAGAAGCTCGAGGTC+TGG | 0.464365 | 8.1:-38620138 | MS.gene009084:CDS |
| CTCCATCCAAATTGTGCGCT+GGG | 0.466966 | 8.1:-38619897 | MS.gene009084:CDS |
| TTGGTTATCCTTGCCTCTCA+AGG | 0.468978 | 8.1:-38620863 | MS.gene009084:CDS |
| CTTTGCGGGAATGCCATGGC+TGG | 0.471268 | 8.1:-38620261 | MS.gene009084:CDS |
| GTTAAAATTGATAGCTTGAA+GGG | 0.473772 | 8.1:-38621645 | MS.gene009084:CDS |
| AAGAAGCTCGAGGTCTGGTT+GGG | 0.474272 | 8.1:-38620133 | MS.gene009084:CDS |
| ATTCTTGAGTCGCAAATTCA+AGG | 0.476921 | 8.1:-38620210 | MS.gene009084:CDS |
| AAGTGTTTGAGATGCCTCCT+TGG | 0.478467 | 8.1:+38620660 | None:intergenic |
| ACAACCTCAAAGTCACCGTT+TGG | 0.479366 | 8.1:+38621531 | None:intergenic |
| GGAGAGAATAAAAGAAATAG+AGG | 0.489082 | 8.1:-38620078 | MS.gene009084:CDS |
| GAGCTTGAGGGAAAGACAGT+TGG | 0.489851 | 8.1:-38621048 | MS.gene009084:CDS |
| TTGGTTGTTATTGGGCCAGA+TGG | 0.490790 | 8.1:-38620787 | MS.gene009084:CDS |
| GGTTAAAATTGATAGCTTGA+AGG | 0.491854 | 8.1:-38621646 | MS.gene009084:CDS |
| TGAACCCTTTCTGATGTGAA+AGG | 0.494644 | 8.1:+38621291 | None:intergenic |
| CAAAAGGATGACATTGCAAA+GGG | 0.497367 | 8.1:-38620053 | MS.gene009084:CDS |
| CTAGCTTACTTCATTTCCAT+CGG | 0.501319 | 8.1:+38621179 | None:intergenic |
| AAAGAAGCTCGAGGTCTGGT+TGG | 0.502824 | 8.1:-38620134 | MS.gene009084:CDS |
| GACTTTCTTCTTCGCAACAC+CGG | 0.503020 | 8.1:-38622249 | MS.gene009084:CDS |
| AAACAATGATGCACTTGAAG+TGG | 0.503738 | 8.1:-38620327 | MS.gene009084:CDS |
| GATAGCCAGCCATGGCATCT+TGG | 0.503945 | 8.1:+38621461 | None:intergenic |
| CATTGACAAAGATGCGAAGA+AGG | 0.508076 | 8.1:-38620602 | MS.gene009084:intron |
| GAACCCTTTCTGATGTGAAA+GGG | 0.508847 | 8.1:+38621292 | None:intergenic |
| CTCCCAGCGCACAATTTGGA+TGG | 0.511436 | 8.1:+38619895 | None:intergenic |
| ATACCTATCTCTGAGCTTGA+GGG | 0.516850 | 8.1:-38621060 | MS.gene009084:CDS |
| GATACCTATCTCTGAGCTTG+AGG | 0.524940 | 8.1:-38621061 | MS.gene009084:CDS |
| TCTCCATCCAAATTGTGCGC+TGG | 0.526783 | 8.1:-38619898 | MS.gene009084:CDS |
| GAAGAAGAGAAGCCCAAAGA+TGG | 0.528620 | 8.1:-38619846 | MS.gene009084:CDS |
| CATACCCTTTCACATCAGAA+AGG | 0.529163 | 8.1:-38621296 | MS.gene009084:CDS |
| ACCAGTGGGCTGAGAAGTAG+AGG | 0.529711 | 8.1:+38620411 | None:intergenic |
| GACTCTTCTTCATTATCTAA+GGG | 0.532377 | 8.1:+38620913 | None:intergenic |
| TTTATTCTCTCCTCAGTGAA+AGG | 0.534022 | 8.1:+38620089 | None:intergenic |
| AAGAATTAGAAAGTGTGCCT+TGG | 0.535581 | 8.1:-38620882 | MS.gene009084:CDS |
| GCTATCAGATCTCCCTACCT+TGG | 0.538008 | 8.1:-38620806 | MS.gene009084:CDS |
| CTTGATCCCTGTCACTTGAG+AGG | 0.539123 | 8.1:+38620300 | None:intergenic |
| ATCAAGAAGAGGAAGCTAAG+AGG | 0.542413 | 8.1:-38621257 | MS.gene009084:CDS |
| ATACCCTTTCACATCAGAAA+GGG | 0.545743 | 8.1:-38621295 | MS.gene009084:CDS |
| GCCCAATTGCCACGAGCTTG+GGG | 0.546174 | 8.1:+38620177 | None:intergenic |
| AAGAGAAGCCCAAAGATGGA+TGG | 0.550982 | 8.1:-38619842 | MS.gene009084:CDS |
| TGGTTGTTATTGGGCCAGAT+GGG | 0.552045 | 8.1:-38620786 | MS.gene009084:CDS |
| TGCAAAGGGGTTGCCTGAGA+AGG | 0.553374 | 8.1:-38620039 | MS.gene009084:CDS |
| AGAGTTGAAAGATCAAGAAG+AGG | 0.554619 | 8.1:-38621268 | MS.gene009084:CDS |
| ATCAACCCCATGATCCTCAA+TGG | 0.561806 | 8.1:+38620735 | None:intergenic |
| GTATTGAATTAGTTTCGCAC+AGG | 0.568373 | 8.1:+38620834 | None:intergenic |
| TTCCCCTCTAACTCTGACAC+CGG | 0.568510 | 8.1:+38620443 | None:intergenic |
| AGGTCTGGTTGGGCTTTATG+GGG | 0.570437 | 8.1:-38620123 | MS.gene009084:CDS |
| TAATGCCGCTGAGGCCATTG+AGG | 0.572119 | 8.1:-38620749 | MS.gene009084:CDS |
| TCATGGTGTGGTCCGTGTCG+AGG | 0.572429 | 8.1:-38621594 | MS.gene009084:CDS |
| GGCCCAATAACAACCAAGGT+AGG | 0.575985 | 8.1:+38620793 | None:intergenic |
| TTACATGAAACAGTTCATCA+AGG | 0.576778 | 8.1:+38621409 | None:intergenic |
| AGAGAAGCCCAAAGATGGAT+GGG | 0.577163 | 8.1:-38619841 | MS.gene009084:CDS |
| AATTGTGCGCTGGGAGACAA+AGG | 0.578428 | 8.1:-38619888 | MS.gene009084:CDS |
| ATTCACTCCAACGTTGGTGG+AGG | 0.582019 | 8.1:-38621571 | MS.gene009084:CDS |
| TACGACGAACTCTCTCCAAA+CGG | 0.582755 | 8.1:-38621546 | MS.gene009084:CDS |
| CCAATATCGATCTCAAGGAC+TGG | 0.584633 | 8.1:+38621232 | None:intergenic |
| CTCGTGGCAATTGGGCCAAG+TGG | 0.588439 | 8.1:-38620170 | MS.gene009084:CDS |
| GCCCAATAACAACCAAGGTA+GGG | 0.594443 | 8.1:+38620794 | None:intergenic |
| TCGAGGATTCACTCCAACGT+TGG | 0.595933 | 8.1:-38621577 | MS.gene009084:CDS |
| CGATGAAATAGCAAAGGCCA+AGG | 0.596494 | 8.1:-38620677 | MS.gene009084:CDS |
| AGAGGCCAATATCGATCTCA+AGG | 0.596517 | 8.1:+38621227 | None:intergenic |
| CACAAAGTCACGGGAACGAG+AGG | 0.599551 | 8.1:+38621209 | None:intergenic |
| GACTTTGTGATATCATCCGA+TGG | 0.599839 | 8.1:-38621195 | MS.gene009084:CDS |
| AGGAAGCATAAATGGTGCCA+AGG | 0.600015 | 8.1:-38619868 | MS.gene009084:CDS |
| ATTCCGGTGTCAGAGTTAGA+GGG | 0.603592 | 8.1:-38620446 | MS.gene009084:CDS |
| ACAAAAGGATGACATTGCAA+AGG | 0.603905 | 8.1:-38620054 | MS.gene009084:CDS |
| AGGATTCACTCCAACGTTGG+TGG | 0.604343 | 8.1:-38621574 | MS.gene009084:CDS |
| TTTGGAAGAAAAGCACGGCA+TGG | 0.604358 | 8.1:+38620383 | None:intergenic |
| ATTTAATCAAAAGCTTAAGG+AGG | 0.604615 | 8.1:-38620986 | MS.gene009084:CDS |
| AAAGATGGATGGGTTTGTGA+TGG | 0.605439 | 8.1:-38619831 | MS.gene009084:CDS |
| GGATGATATCACAAAGTCAC+GGG | 0.610022 | 8.1:+38621200 | None:intergenic |
| CGGATGATATCACAAAGTCA+CGG | 0.612088 | 8.1:+38621199 | None:intergenic |
| ATGCTTCAGCGCCATAAACA+CGG | 0.614436 | 8.1:+38621316 | None:intergenic |
| TGTGATGGTTGTGAGGATGA+GGG | 0.617819 | 8.1:-38619960 | MS.gene009084:CDS |
| CTCAGCCGATAAAGATGATG+AGG | 0.619000 | 8.1:-38621502 | MS.gene009084:CDS |
| TCATCAAGCAATGCAAGATG+AGG | 0.620375 | 8.1:+38621378 | None:intergenic |
| TTATTGCTGTGATGGTTGTG+AGG | 0.621592 | 8.1:-38619967 | MS.gene009084:CDS |
| CCAAAGGGAAGTGCCAGCCA+TGG | 0.621888 | 8.1:+38620248 | None:intergenic |
| ATGATCCTCAATGGCCTCAG+CGG | 0.626422 | 8.1:+38620744 | None:intergenic |
| AATTCTTTGCGGGAATGCCA+TGG | 0.628513 | 8.1:-38620265 | MS.gene009084:CDS |
| CACGGCATGGAGGACACCAG+TGG | 0.631271 | 8.1:+38620396 | None:intergenic |
| CAGTTGTAGTACCTGATCGC+CGG | 0.631584 | 8.1:+38622230 | None:intergenic |
| ACGGCATGGAGGACACCAGT+GGG | 0.634633 | 8.1:+38620397 | None:intergenic |
| ATCTGGCATCCCCAAGCTCG+TGG | 0.647534 | 8.1:-38620186 | MS.gene009084:CDS |
| TGAACTCGATGAAATAGCAA+AGG | 0.647912 | 8.1:-38620683 | MS.gene009084:CDS |
| TTCCGGTGTCAGAGTTAGAG+GGG | 0.651542 | 8.1:-38620445 | MS.gene009084:CDS |
| AGTGGGCTGAGAAGTAGAGG+AGG | 0.655615 | 8.1:+38620414 | None:intergenic |
| ATCTGGCCCAATAACAACCA+AGG | 0.657451 | 8.1:+38620789 | None:intergenic |
| TGAGGCCATTGAGGATCATG+GGG | 0.663531 | 8.1:-38620740 | MS.gene009084:CDS |
| TCTACATCCTAATGCCGCTG+AGG | 0.677477 | 8.1:-38620758 | MS.gene009084:CDS |
| TGAAATAGCAAAGGCCAAGG+AGG | 0.686521 | 8.1:-38620674 | MS.gene009084:CDS |
| GGAAGAAAAGCACGGCATGG+AGG | 0.691216 | 8.1:+38620386 | None:intergenic |
| ACTGTCACGAAAGAAGCTCG+AGG | 0.699376 | 8.1:-38620143 | MS.gene009084:CDS |
| TTGAGAGGCAAGGATAACCA+AGG | 0.706344 | 8.1:+38620865 | None:intergenic |
| TCGTAGACCTCCACCAACGT+TGG | 0.713590 | 8.1:+38621564 | None:intergenic |
| CATCACAGCAATAAACATTG+CGG | 0.718506 | 8.1:+38619976 | None:intergenic |
| AAAAGGATGACATTGCAAAG+GGG | 0.729020 | 8.1:-38620052 | MS.gene009084:CDS |
| GTTGGAGTGAATCCTCGACA+CGG | 0.764812 | 8.1:+38621582 | None:intergenic |
| AGATGCTTATCCTTTCACTG+AGG | 0.785205 | 8.1:-38620099 | MS.gene009084:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAGCAAATTAAAAAG+AGG | + | chr8.1:38621602-38621621 | None:intergenic | 15.0% |
| !! | TTAATAGCAAATTAAAAAGA+GGG | + | chr8.1:38621601-38621620 | None:intergenic | 15.0% |
| !!! | AAACAAAACTATACAATTTT+TGG | - | chr8.1:38620042-38620061 | MS.gene009084:CDS | 15.0% |
| !! | ACTATTTAATCAAAAGCTTA+AGG | - | chr8.1:38621132-38621151 | MS.gene009084:intron | 20.0% |
| !! | ATCTTACAACATAAATTTAC+TGG | - | chr8.1:38621548-38621567 | MS.gene009084:CDS | 20.0% |
| !! | TTCATAAAACACAACAAAAA+AGG | + | chr8.1:38619951-38619970 | None:intergenic | 20.0% |
| !!! | ATTCTCTCTTTTTTATGAAT+CGG | - | chr8.1:38620078-38620097 | MS.gene009084:CDS | 20.0% |
| ! | AAATTAAAAAGAGGGAATGA+TGG | + | chr8.1:38621593-38621612 | None:intergenic | 25.0% |
| ! | AACAACCAGATAATAACAAA+AGG | + | chr8.1:38620997-38621016 | None:intergenic | 25.0% |
| ! | AATTAAAAAGAGGGAATGAT+GGG | + | chr8.1:38621592-38621611 | None:intergenic | 25.0% |
| ! | ATCCTTTAATGAATTCTTTG+CGG | - | chr8.1:38621845-38621864 | MS.gene009084:intron | 25.0% |
| ! | ATTTAATCAAAAGCTTAAGG+AGG | - | chr8.1:38621135-38621154 | MS.gene009084:intron | 25.0% |
| ! | TTAACTCAGTATGATATAGT+AGG | - | chr8.1:38620969-38620988 | MS.gene009084:CDS | 25.0% |
| !! | GTTAAAATTGATAGCTTGAA+GGG | - | chr8.1:38620476-38620495 | MS.gene009084:intron | 25.0% |
| !!! | TCTCATATTTTGAAATTCAC+AGG | - | chr8.1:38620454-38620473 | MS.gene009084:intron | 25.0% |
| !!! | TTTGTTATTATCTGGTTGTT+TGG | - | chr8.1:38620997-38621016 | MS.gene009084:CDS | 25.0% |
| !!! | TTTTGATTAAATAGTGTGCA+TGG | + | chr8.1:38621127-38621146 | None:intergenic | 25.0% |
| AAAAAGGAGAAGAGAAGTAA+CGG | + | chr8.1:38619935-38619954 | None:intergenic | 30.0% | |
| AAAAGCCTCATCATCTTTAT+CGG | + | chr8.1:38620627-38620646 | None:intergenic | 30.0% | |
| ACAAAAAGCTGAAGGAAAAT+GGG | - | chr8.1:38621161-38621180 | MS.gene009084:intron | 30.0% | |
| ATAAAACTACCACTTCAGTT+TGG | + | chr8.1:38620398-38620417 | None:intergenic | 30.0% | |
| ATTAAAAAGAGGGAATGATG+GGG | + | chr8.1:38621591-38621610 | None:intergenic | 30.0% | |
| GACTCTTCTTCATTATCTAA+GGG | + | chr8.1:38621211-38621230 | None:intergenic | 30.0% | |
| GATGAACTGTTTCATGTAAA+CGG | - | chr8.1:38620716-38620735 | MS.gene009084:CDS | 30.0% | |
| GGAAAAGTTATTACTGAAGA+TGG | - | chr8.1:38620770-38620789 | MS.gene009084:CDS | 30.0% | |
| GGAGAGAATAAAAGAAATAG+AGG | - | chr8.1:38622043-38622062 | MS.gene009084:intron | 30.0% | |
| GTGTCTCTGAATCAAAAAAT+GGG | + | chr8.1:38620685-38620704 | None:intergenic | 30.0% | |
| GTTAACATTATCCGTGTTTA+TGG | - | chr8.1:38620794-38620813 | MS.gene009084:CDS | 30.0% | |
| TAAAACTACCACTTCAGTTT+GGG | + | chr8.1:38620397-38620416 | None:intergenic | 30.0% | |
| TACAAAAAGCTGAAGGAAAA+TGG | - | chr8.1:38621160-38621179 | MS.gene009084:intron | 30.0% | |
| TCCTTTAATGAATTCTTTGC+GGG | - | chr8.1:38621846-38621865 | MS.gene009084:intron | 30.0% | |
| TGACTCTTCTTCATTATCTA+AGG | + | chr8.1:38621212-38621231 | None:intergenic | 30.0% | |
| TTACATGAAACAGTTCATCA+AGG | + | chr8.1:38620715-38620734 | None:intergenic | 30.0% | |
| TTTATCTCCATTTCAGATTC+CGG | - | chr8.1:38621659-38621678 | MS.gene009084:intron | 30.0% | |
| TTTATTTGTACTTGTACCGA+TGG | - | chr8.1:38620413-38620432 | MS.gene009084:CDS | 30.0% | |
| ! | AAAAGAAATAGAGGCACAAA+AGG | - | chr8.1:38622052-38622071 | MS.gene009084:intron | 30.0% |
| ! | GGTTAAAATTGATAGCTTGA+AGG | - | chr8.1:38620475-38620494 | MS.gene009084:intron | 30.0% |
| ! | TGTTTTGTGCCTTAATCTTA+TGG | + | chr8.1:38621779-38621798 | None:intergenic | 30.0% |
| ! | TTTTCTTCCAAAACTCATTG+AGG | - | chr8.1:38621749-38621768 | MS.gene009084:intron | 30.0% |
| !! | GTTTCTATTTTTCAGCATCA+TGG | - | chr8.1:38620510-38620529 | MS.gene009084:intron | 30.0% |
| !!! | AGGTTCCTTTTGTTATTATC+TGG | - | chr8.1:38620989-38621008 | MS.gene009084:CDS | 30.0% |
| AAAAGGATGACATTGCAAAG+GGG | - | chr8.1:38622069-38622088 | MS.gene009084:intron | 35.0% | |
| AAACAATGATGCACTTGAAG+TGG | - | chr8.1:38621794-38621813 | MS.gene009084:intron | 35.0% | |
| ACAAAAGGATGACATTGCAA+AGG | - | chr8.1:38622067-38622086 | MS.gene009084:intron | 35.0% | |
| AGAGTTGAAAGATCAAGAAG+AGG | - | chr8.1:38620853-38620872 | MS.gene009084:CDS | 35.0% | |
| ATACCCTTTCACATCAGAAA+GGG | - | chr8.1:38620826-38620845 | MS.gene009084:CDS | 35.0% | |
| ATAGCACCACAATATTCCAT+CGG | + | chr8.1:38620432-38620451 | None:intergenic | 35.0% | |
| ATTCTTGAGTCGCAAATTCA+AGG | - | chr8.1:38621911-38621930 | MS.gene009084:intron | 35.0% | |
| CAAAAAGCTGAAGGAAAATG+GGG | - | chr8.1:38621162-38621181 | MS.gene009084:intron | 35.0% | |
| CAAAAGGATGACATTGCAAA+GGG | - | chr8.1:38622068-38622087 | MS.gene009084:intron | 35.0% | |
| CATCACAGCAATAAACATTG+CGG | + | chr8.1:38622148-38622167 | None:intergenic | 35.0% | |
| CATGAAAGGAAAAGTGAGAT+TGG | + | chr8.1:38621031-38621050 | None:intergenic | 35.0% | |
| CGTGTCTCTGAATCAAAAAA+TGG | + | chr8.1:38620686-38620705 | None:intergenic | 35.0% | |
| CTAGCTTACTTCATTTCCAT+CGG | + | chr8.1:38620945-38620964 | None:intergenic | 35.0% | |
| TCCCGCAAAGAATTCATTAA+AGG | + | chr8.1:38621850-38621869 | None:intergenic | 35.0% | |
| TGAACTCGATGAAATAGCAA+AGG | - | chr8.1:38621438-38621457 | MS.gene009084:CDS | 35.0% | |
| TGAGGCATACCATAAGATTA+AGG | - | chr8.1:38621767-38621786 | MS.gene009084:intron | 35.0% | |
| TTAAAAAGAGGGAATGATGG+GGG | + | chr8.1:38621590-38621609 | None:intergenic | 35.0% | |
| TTTATTCTCTCCTCAGTGAA+AGG | + | chr8.1:38622035-38622054 | None:intergenic | 35.0% | |
| ! | AAGAATTAGAAAGTGTGCCT+TGG | - | chr8.1:38621239-38621258 | MS.gene009084:CDS | 35.0% |
| ! | GTATTGAATTAGTTTCGCAC+AGG | + | chr8.1:38621290-38621309 | None:intergenic | 35.0% |
| ! | TCAAACACTTGAGTCAGTTT+TGG | - | chr8.1:38621474-38621493 | MS.gene009084:CDS | 35.0% |
| ! | TCGAGTTCAGAAAACTTTTC+AGG | + | chr8.1:38621427-38621446 | None:intergenic | 35.0% |
| ! | TCTTTTCTTGTGTCACCAAA+GGG | + | chr8.1:38621891-38621910 | None:intergenic | 35.0% |
| ! | TTCTTTTCTTGTGTCACCAA+AGG | + | chr8.1:38621892-38621911 | None:intergenic | 35.0% |
| ! | TTGAGGACTAGGTTTCTTTT+GGG | + | chr8.1:38620372-38620391 | None:intergenic | 35.0% |
| !! | CTTTTGGATGTTGTTTGCAA+GGG | + | chr8.1:38620267-38620286 | None:intergenic | 35.0% |
| !! | GAAAACTTTTCAGGAGTGAA+TGG | + | chr8.1:38621418-38621437 | None:intergenic | 35.0% |
| !! | TATTTTTCAGCATCATGGTG+TGG | - | chr8.1:38620515-38620534 | MS.gene009084:intron | 35.0% |
| !!! | TGAGTTTTGGAAGAAAAGCA+CGG | + | chr8.1:38621746-38621765 | None:intergenic | 35.0% |
| ACAGGTGAACTACAGATAGA+AGG | - | chr8.1:38620145-38620164 | MS.gene009084:CDS | 40.0% | |
| AGATGCTTATCCTTTCACTG+AGG | - | chr8.1:38622022-38622041 | MS.gene009084:intron | 40.0% | |
| AGCTTGAAGGGAAAGAAACT+TGG | - | chr8.1:38620488-38620507 | MS.gene009084:intron | 40.0% | |
| ATACCTATCTCTGAGCTTGA+GGG | - | chr8.1:38621061-38621080 | MS.gene009084:CDS | 40.0% | |
| ATCAAGAAGAGGAAGCTAAG+AGG | - | chr8.1:38620864-38620883 | MS.gene009084:CDS | 40.0% | |
| ATCACAAACCCATCCATCTT+TGG | + | chr8.1:38622291-38622310 | None:intergenic | 40.0% | |
| CATACCCTTTCACATCAGAA+AGG | - | chr8.1:38620825-38620844 | MS.gene009084:CDS | 40.0% | |
| CATTGACAAAGATGCGAAGA+AGG | - | chr8.1:38621519-38621538 | MS.gene009084:CDS | 40.0% | |
| CCTTGCAAACAACATCCAAA+AGG | - | chr8.1:38620265-38620284 | MS.gene009084:CDS | 40.0% | |
| CGAAGAAGAAAGTCTCTATC+AGG | + | chr8.1:38619866-38619885 | None:intergenic | 40.0% | |
| CGCAATGTTTATTGCTGTGA+TGG | - | chr8.1:38622146-38622165 | MS.gene009084:intron | 40.0% | |
| CGGATGATATCACAAAGTCA+CGG | + | chr8.1:38620925-38620944 | None:intergenic | 40.0% | |
| GAACCCTTTCTGATGTGAAA+GGG | + | chr8.1:38620832-38620851 | None:intergenic | 40.0% | |
| GACTTTGTGATATCATCCGA+TGG | - | chr8.1:38620926-38620945 | MS.gene009084:CDS | 40.0% | |
| GAGAAGAGAAGTAACGGTAA+CGG | + | chr8.1:38619929-38619948 | None:intergenic | 40.0% | |
| GGAGGTTTACAAAAAGCTGA+AGG | - | chr8.1:38621153-38621172 | MS.gene009084:intron | 40.0% | |
| GGATGATATCACAAAGTCAC+GGG | + | chr8.1:38620924-38620943 | None:intergenic | 40.0% | |
| GTATCTGTTGTGCACATGAA+AGG | + | chr8.1:38621045-38621064 | None:intergenic | 40.0% | |
| GTTGTCTAGGAGTCAATTTC+AGG | + | chr8.1:38620302-38620321 | None:intergenic | 40.0% | |
| TCACAAACCCATCCATCTTT+GGG | + | chr8.1:38622290-38622309 | None:intergenic | 40.0% | |
| TCATCAAGCAATGCAAGATG+AGG | + | chr8.1:38620746-38620765 | None:intergenic | 40.0% | |
| TGAACCCTTTCTGATGTGAA+AGG | + | chr8.1:38620833-38620852 | None:intergenic | 40.0% | |
| TTATTGCTGTGATGGTTGTG+AGG | - | chr8.1:38622154-38622173 | MS.gene009084:intron | 40.0% | |
| ! | AAAGATGGATGGGTTTGTGA+TGG | - | chr8.1:38622290-38622309 | MS.gene009084:CDS | 40.0% |
| ! | AGTCGCAAATTCAAGGTATC+TGG | - | chr8.1:38621918-38621937 | MS.gene009084:intron | 40.0% |
| ! | CTTGTACCGATGGAATATTG+TGG | - | chr8.1:38620423-38620442 | MS.gene009084:CDS | 40.0% |
| ! | GGAGACAAAGGAAGCATAAA+TGG | - | chr8.1:38622245-38622264 | MS.gene009084:CDS | 40.0% |
| ! | GTTGAGGACTAGGTTTCTTT+TGG | + | chr8.1:38620373-38620392 | None:intergenic | 40.0% |
| ! | TCCCTACCTTGGTTGTTATT+GGG | - | chr8.1:38621326-38621345 | MS.gene009084:CDS | 40.0% |
| ! | TCTAGGAGTCAATTTCAGGT+GGG | + | chr8.1:38620298-38620317 | None:intergenic | 40.0% |
| ! | TGAGGACTAGGTTTCTTTTG+GGG | + | chr8.1:38620371-38620390 | None:intergenic | 40.0% |
| ! | TGGTATGCCTCAATGAGTTT+TGG | + | chr8.1:38621759-38621778 | None:intergenic | 40.0% |
| ! | TGTTGGGGGTTTTTGTATTC+AGG | + | chr8.1:38620238-38620257 | None:intergenic | 40.0% |
| !! | AAGTAACGGTAACGGAGTTA+CGG | + | chr8.1:38619921-38619940 | None:intergenic | 40.0% |
| !! | CCTTTTGGATGTTGTTTGCA+AGG | + | chr8.1:38620268-38620287 | None:intergenic | 40.0% |
| !! | TTTGCAAGGGTGTCTTTGTT+GGG | + | chr8.1:38620254-38620273 | None:intergenic | 40.0% |
| !!! | TTATGGATGCCGTTTTTCTG+TGG | + | chr8.1:38620328-38620347 | None:intergenic | 40.0% |
| AAAAATGGGATAGCCAGCCA+TGG | + | chr8.1:38620671-38620690 | None:intergenic | 45.0% | |
| AAGAGAAGCCCAAAGATGGA+TGG | - | chr8.1:38622279-38622298 | MS.gene009084:CDS | 45.0% | |
| AATTCTTTGCGGGAATGCCA+TGG | - | chr8.1:38621856-38621875 | MS.gene009084:intron | 45.0% | |
| ACAACCTCAAAGTCACCGTT+TGG | + | chr8.1:38620593-38620612 | None:intergenic | 45.0% | |
| AGAGAAGCCCAAAGATGGAT+GGG | - | chr8.1:38622280-38622299 | MS.gene009084:CDS | 45.0% | |
| AGAGGCCAATATCGATCTCA+AGG | + | chr8.1:38620897-38620916 | None:intergenic | 45.0% | |
| AGTAGTGACGATGGGTGTTA+TGG | + | chr8.1:38620345-38620364 | None:intergenic | 45.0% | |
| ATCAACCCCATGATCCTCAA+TGG | + | chr8.1:38621389-38621408 | None:intergenic | 45.0% | |
| ATCGGTGAAGTACAGACAGA+AGG | - | chr8.1:38620192-38620211 | MS.gene009084:CDS | 45.0% | |
| ATCTGGCCCAATAACAACCA+AGG | + | chr8.1:38621335-38621354 | None:intergenic | 45.0% | |
| ATGCTTCAGCGCCATAAACA+CGG | + | chr8.1:38620808-38620827 | None:intergenic | 45.0% | |
| CCAATATCGATCTCAAGGAC+TGG | + | chr8.1:38620892-38620911 | None:intergenic | 45.0% | |
| CCAGTCCTTGAGATCGATAT+TGG | - | chr8.1:38620889-38620908 | MS.gene009084:CDS | 45.0% | |
| CGATGAAATAGCAAAGGCCA+AGG | - | chr8.1:38621444-38621463 | MS.gene009084:CDS | 45.0% | |
| CTCAGCCGATAAAGATGATG+AGG | - | chr8.1:38620619-38620638 | MS.gene009084:CDS | 45.0% | |
| CTCCCTACCTTGGTTGTTAT+TGG | - | chr8.1:38621325-38621344 | MS.gene009084:CDS | 45.0% | |
| CTTGCATTGCTTGATGAAGC+TGG | - | chr8.1:38620749-38620768 | MS.gene009084:CDS | 45.0% | |
| GAAGAAGAGAAGCCCAAAGA+TGG | - | chr8.1:38622275-38622294 | MS.gene009084:CDS | 45.0% | |
| GACAACCGACCACAGAAAAA+CGG | - | chr8.1:38620316-38620335 | MS.gene009084:CDS | 45.0% | |
| GACTTTCTTCTTCGCAACAC+CGG | - | chr8.1:38619872-38619891 | MS.gene009084:CDS | 45.0% | |
| GATACCTATCTCTGAGCTTG+AGG | - | chr8.1:38621060-38621079 | MS.gene009084:CDS | 45.0% | |
| GCCCAATAACAACCAAGGTA+GGG | + | chr8.1:38621330-38621349 | None:intergenic | 45.0% | |
| GTCTAGGAGTCAATTTCAGG+TGG | + | chr8.1:38620299-38620318 | None:intergenic | 45.0% | |
| GTGAGGATGAGGGAGATAAT+TGG | - | chr8.1:38622171-38622190 | MS.gene009084:intron | 45.0% | |
| TACGACGAACTCTCTCCAAA+CGG | - | chr8.1:38620575-38620594 | MS.gene009084:intron | 45.0% | |
| TCAGGTGTTCCGCCTATATA+CGG | + | chr8.1:38620220-38620239 | None:intergenic | 45.0% | |
| TCTGACACCGGAATCTGAAA+TGG | + | chr8.1:38621669-38621688 | None:intergenic | 45.0% | |
| TGAAATAGCAAAGGCCAAGG+AGG | - | chr8.1:38621447-38621466 | MS.gene009084:CDS | 45.0% | |
| TGTGATGGTTGTGAGGATGA+GGG | - | chr8.1:38622161-38622180 | MS.gene009084:intron | 45.0% | |
| TTGAGAGGCAAGGATAACCA+AGG | + | chr8.1:38621259-38621278 | None:intergenic | 45.0% | |
| TTGGTTATCCTTGCCTCTCA+AGG | - | chr8.1:38621258-38621277 | MS.gene009084:CDS | 45.0% | |
| TTTCCCTCAAGCTCAGAGAT+AGG | + | chr8.1:38621067-38621086 | None:intergenic | 45.0% | |
| TTTGGGCTTCTCTTCTTCCT+TGG | + | chr8.1:38622273-38622292 | None:intergenic | 45.0% | |
| ! | AAGTGTTTGAGATGCCTCCT+TGG | + | chr8.1:38621464-38621483 | None:intergenic | 45.0% |
| ! | AGGAAGCATAAATGGTGCCA+AGG | - | chr8.1:38622253-38622272 | MS.gene009084:CDS | 45.0% |
| ! | ATTCCGGTGTCAGAGTTAGA+GGG | - | chr8.1:38621675-38621694 | MS.gene009084:intron | 45.0% |
| ! | CTAGGAGTCAATTTCAGGTG+GGG | + | chr8.1:38620297-38620316 | None:intergenic | 45.0% |
| ! | GAGGACTAGGTTTCTTTTGG+GGG | + | chr8.1:38620370-38620389 | None:intergenic | 45.0% |
| ! | GGATGTAGAGTTTTCCCATC+TGG | + | chr8.1:38621352-38621371 | None:intergenic | 45.0% |
| ! | GGTTTTCCTCTCAAGTGACA+GGG | - | chr8.1:38621815-38621834 | MS.gene009084:intron | 45.0% |
| ! | TGGTTGTTATTGGGCCAGAT+GGG | - | chr8.1:38621335-38621354 | MS.gene009084:CDS | 45.0% |
| ! | TGGTTTTCCTCTCAAGTGAC+AGG | - | chr8.1:38621814-38621833 | MS.gene009084:intron | 45.0% |
| ! | TTGGTTGTTATTGGGCCAGA+TGG | - | chr8.1:38621334-38621353 | MS.gene009084:CDS | 45.0% |
| ! | TTTGGAAGAAAAGCACGGCA+TGG | + | chr8.1:38621741-38621760 | None:intergenic | 45.0% |
| ! | TTTTCTGTGGTCGGTTGTCT+AGG | + | chr8.1:38620315-38620334 | None:intergenic | 45.0% |
| !! | GTTTGCAAGGGTGTCTTTGT+TGG | + | chr8.1:38620255-38620274 | None:intergenic | 45.0% |
| !! | TTGCAAGGGTGTCTTTGTTG+GGG | + | chr8.1:38620253-38620272 | None:intergenic | 45.0% |
| !!! | CTTGAGTCAGTTTTGGTGTC+TGG | - | chr8.1:38621481-38621500 | MS.gene009084:CDS | 45.0% |
| !!! | GCTACTTTTCCAAGATGCCA+TGG | - | chr8.1:38620651-38620670 | MS.gene009084:CDS | 45.0% |
| !!! | ATTAATAACAAATTTTTTTT+TGG | + | chr8.1:38621630-38621649 | None:intergenic | 5.0% |
| AAAGAAGCTCGAGGTCTGGT+TGG | - | chr8.1:38621987-38622006 | MS.gene009084:intron | 50.0% | |
| AAGAAGCTCGAGGTCTGGTT+GGG | - | chr8.1:38621988-38622007 | MS.gene009084:intron | 50.0% | |
| AATTGTGCGCTGGGAGACAA+AGG | - | chr8.1:38622233-38622252 | MS.gene009084:intron | 50.0% | |
| ACTGTCACGAAAGAAGCTCG+AGG | - | chr8.1:38621978-38621997 | MS.gene009084:intron | 50.0% | |
| AGGATTCACTCCAACGTTGG+TGG | - | chr8.1:38620547-38620566 | MS.gene009084:intron | 50.0% | |
| ATGATCCTCAATGGCCTCAG+CGG | + | chr8.1:38621380-38621399 | None:intergenic | 50.0% | |
| CACCGATCTCCGCCTATATA+CGG | + | chr8.1:38620179-38620198 | None:intergenic | 50.0% | |
| CAGTTGTAGTACCTGATCGC+CGG | + | chr8.1:38619894-38619913 | None:intergenic | 50.0% | |
| CCTCAACACCCAAACTGAAG+TGG | - | chr8.1:38620386-38620405 | MS.gene009084:CDS | 50.0% | |
| CTCCATCCAAATTGTGCGCT+GGG | - | chr8.1:38622224-38622243 | MS.gene009084:intron | 50.0% | |
| CTCTCCAAACGGTGACTTTG+AGG | - | chr8.1:38620586-38620605 | MS.gene009084:intron | 50.0% | |
| CTGAGGCCATTGAGGATCAT+GGG | - | chr8.1:38621380-38621399 | MS.gene009084:CDS | 50.0% | |
| CTGTGATGGTTGTGAGGATG+AGG | - | chr8.1:38622160-38622179 | MS.gene009084:intron | 50.0% | |
| GAGCTTCTTTCGTGACAGTC+TGG | + | chr8.1:38621977-38621996 | None:intergenic | 50.0% | |
| GAGCTTGAGGGAAAGACAGT+TGG | - | chr8.1:38621073-38621092 | MS.gene009084:intron | 50.0% | |
| GCTATCAGATCTCCCTACCT+TGG | - | chr8.1:38621315-38621334 | MS.gene009084:CDS | 50.0% | |
| GGCCCAATAACAACCAAGGT+AGG | + | chr8.1:38621331-38621350 | None:intergenic | 50.0% | |
| GTCTCTGTTCGTCTTGTGCA+GGG | + | chr8.1:38620127-38620146 | None:intergenic | 50.0% | |
| GTTGGAGTGAATCCTCGACA+CGG | + | chr8.1:38620542-38620561 | None:intergenic | 50.0% | |
| GTTTCATGCGTCACCTTCTC+AGG | + | chr8.1:38622098-38622117 | None:intergenic | 50.0% | |
| TCGAGGATTCACTCCAACGT+TGG | - | chr8.1:38620544-38620563 | MS.gene009084:intron | 50.0% | |
| TCTACATCCTAATGCCGCTG+AGG | - | chr8.1:38621363-38621382 | MS.gene009084:CDS | 50.0% | |
| TCTCCATCCAAATTGTGCGC+TGG | - | chr8.1:38622223-38622242 | MS.gene009084:intron | 50.0% | |
| TGAGGCCATTGAGGATCATG+GGG | - | chr8.1:38621381-38621400 | MS.gene009084:CDS | 50.0% | |
| TGCACAAGACGAACAGAGAC+AGG | - | chr8.1:38620127-38620146 | MS.gene009084:CDS | 50.0% | |
| TGTCTCTGTTCGTCTTGTGC+AGG | + | chr8.1:38620128-38620147 | None:intergenic | 50.0% | |
| TTCCCCTCTAACTCTGACAC+CGG | + | chr8.1:38621681-38621700 | None:intergenic | 50.0% | |
| TTGTCTCCCAGCGCACAATT+TGG | + | chr8.1:38622233-38622252 | None:intergenic | 50.0% | |
| ! | AGGTCTGGTTGGGCTTTATG+GGG | - | chr8.1:38621998-38622017 | MS.gene009084:intron | 50.0% |
| ! | ATTCACTCCAACGTTGGTGG+AGG | - | chr8.1:38620550-38620569 | MS.gene009084:intron | 50.0% |
| ! | CCACTTCAGTTTGGGTGTTG+AGG | + | chr8.1:38620389-38620408 | None:intergenic | 50.0% |
| ! | CTTGATCCCTGTCACTTGAG+AGG | + | chr8.1:38621824-38621843 | None:intergenic | 50.0% |
| ! | CTTTTCCAAGATGCCATGGC+TGG | - | chr8.1:38620655-38620674 | MS.gene009084:CDS | 50.0% |
| ! | GAGGTCTGGTTGGGCTTTAT+GGG | - | chr8.1:38621997-38622016 | MS.gene009084:intron | 50.0% |
| ! | GATTCCGGTGTCAGAGTTAG+AGG | - | chr8.1:38621674-38621693 | MS.gene009084:intron | 50.0% |
| ! | TTCCGGTGTCAGAGTTAGAG+GGG | - | chr8.1:38621676-38621695 | MS.gene009084:intron | 50.0% |
| !! | AGACAGAAGGCGCCGTATAT+AGG | - | chr8.1:38620205-38620224 | MS.gene009084:CDS | 50.0% |
| !! | CAGTTTGGGTGTTGAGGACT+AGG | + | chr8.1:38620383-38620402 | None:intergenic | 50.0% |
| !! | GCACAGGTTTTGTCCTTGAG+AGG | + | chr8.1:38621274-38621293 | None:intergenic | 50.0% |
| !! | GGTTTTGTCCTTGAGAGGCA+AGG | + | chr8.1:38621269-38621288 | None:intergenic | 50.0% |
| !! | TAACGGTAACGGAGTTACGG+TGG | + | chr8.1:38619918-38619937 | None:intergenic | 50.0% |
| !! | TGCAAGGGTGTCTTTGTTGG+GGG | + | chr8.1:38620252-38620271 | None:intergenic | 50.0% |
| !!! | GGATGCCGTTTTTCTGTGGT+CGG | + | chr8.1:38620324-38620343 | None:intergenic | 50.0% |
| ATCCCCAAGCTCGTGGCAAT+TGG | - | chr8.1:38621942-38621961 | MS.gene009084:intron | 55.0% | |
| CACAAAGTCACGGGAACGAG+AGG | + | chr8.1:38620915-38620934 | None:intergenic | 55.0% | |
| CACGAAAGAAGCTCGAGGTC+TGG | - | chr8.1:38621983-38622002 | MS.gene009084:intron | 55.0% | |
| CGAGGTCTGGTTGGGCTTTA+TGG | - | chr8.1:38621996-38622015 | MS.gene009084:intron | 55.0% | |
| CGATCTCCGCCTATATACGG+CGG | + | chr8.1:38620176-38620195 | None:intergenic | 55.0% | |
| CGCCGTATATAGGCGGAGAT+CGG | - | chr8.1:38620174-38620193 | MS.gene009084:CDS | 55.0% | |
| CTCCCAGCGCACAATTTGGA+TGG | + | chr8.1:38622229-38622248 | None:intergenic | 55.0% | |
| GATAGCCAGCCATGGCATCT+TGG | + | chr8.1:38620663-38620682 | None:intergenic | 55.0% | |
| GCTGAGGCCATTGAGGATCA+TGG | - | chr8.1:38621379-38621398 | MS.gene009084:CDS | 55.0% | |
| TAATGCCGCTGAGGCCATTG+AGG | - | chr8.1:38621372-38621391 | MS.gene009084:CDS | 55.0% | |
| TCAATGGCCTCAGCGGCATT+AGG | + | chr8.1:38621373-38621392 | None:intergenic | 55.0% | |
| TCCCCAAGCTCGTGGCAATT+GGG | - | chr8.1:38621943-38621962 | MS.gene009084:intron | 55.0% | |
| TCCTCTACTTCTCAGCCCAC+TGG | - | chr8.1:38621709-38621728 | MS.gene009084:intron | 55.0% | |
| TCGTAGACCTCCACCAACGT+TGG | + | chr8.1:38620560-38620579 | None:intergenic | 55.0% | |
| TGCAAAGGGGTTGCCTGAGA+AGG | - | chr8.1:38622082-38622101 | MS.gene009084:intron | 55.0% | |
| TGGGGGAGAGTAGTGACGAT+GGG | + | chr8.1:38620353-38620372 | None:intergenic | 55.0% | |
| TTCGTGACAGTCTGGCCACT+TGG | + | chr8.1:38621969-38621988 | None:intergenic | 55.0% | |
| TTGGGGGAGAGTAGTGACGA+TGG | + | chr8.1:38620354-38620373 | None:intergenic | 55.0% | |
| ! | GGAAGAAAAGCACGGCATGG+AGG | + | chr8.1:38621738-38621757 | None:intergenic | 55.0% |
| ! | GGAGTCAATTTCAGGTGGGG+TGG | + | chr8.1:38620294-38620313 | None:intergenic | 55.0% |
| !! | ACCAGTGGGCTGAGAAGTAG+AGG | + | chr8.1:38621713-38621732 | None:intergenic | 55.0% |
| !! | AGTGGGCTGAGAAGTAGAGG+AGG | + | chr8.1:38621710-38621729 | None:intergenic | 55.0% |
| !! | CAGAAGGCGCCGTATATAGG+CGG | - | chr8.1:38620208-38620227 | MS.gene009084:CDS | 55.0% |
| ACGGCATGGAGGACACCAGT+GGG | + | chr8.1:38621727-38621746 | None:intergenic | 60.0% | |
| ATCTGGCATCCCCAAGCTCG+TGG | - | chr8.1:38621935-38621954 | MS.gene009084:intron | 60.0% | |
| CCATGGCTGGCACTTCCCTT+TGG | - | chr8.1:38621873-38621892 | MS.gene009084:intron | 60.0% | |
| CTCGTGGCAATTGGGCCAAG+TGG | - | chr8.1:38621951-38621970 | MS.gene009084:intron | 60.0% | |
| CTTTGCGGGAATGCCATGGC+TGG | - | chr8.1:38621860-38621879 | MS.gene009084:intron | 60.0% | |
| GCCCAATTGCCACGAGCTTG+GGG | + | chr8.1:38621947-38621966 | None:intergenic | 60.0% | |
| GGCCCAATTGCCACGAGCTT+GGG | + | chr8.1:38621948-38621967 | None:intergenic | 60.0% | |
| TCATGGTGTGGTCCGTGTCG+AGG | - | chr8.1:38620527-38620546 | MS.gene009084:intron | 60.0% | |
| TCTCCGCCTATATACGGCGG+CGG | + | chr8.1:38620173-38620192 | None:intergenic | 60.0% | |
| TCTTCGCAACACCGGCGATC+AGG | - | chr8.1:38619880-38619899 | MS.gene009084:CDS | 60.0% | |
| TGGCCCAATTGCCACGAGCT+TGG | + | chr8.1:38621949-38621968 | None:intergenic | 60.0% | |
| ! | CAGGTGGGGTGGTGTCCTTT+TGG | + | chr8.1:38620283-38620302 | None:intergenic | 60.0% |
| !! | CCAAAGGGAAGTGCCAGCCA+TGG | + | chr8.1:38621876-38621895 | None:intergenic | 60.0% |
| CACGGCATGGAGGACACCAG+TGG | + | chr8.1:38621728-38621747 | None:intergenic | 65.0% | |
| !! | AAGGCGCCGCCGCCGTATAT+AGG | - | chr8.1:38620164-38620183 | MS.gene009084:CDS | 65.0% |
| GCGCCGCCGCCGTATATAGG+CGG | - | chr8.1:38620167-38620186 | MS.gene009084:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 38619809 | 38622334 | 38619809 | ID=MS.gene009084 |
| chr8.1 | mRNA | 38619809 | 38622334 | 38619809 | ID=MS.gene009084.t1;Parent=MS.gene009084 |
| chr8.1 | exon | 38622242 | 38622334 | 38622242 | ID=MS.gene009084.t1.exon1;Parent=MS.gene009084.t1 |
| chr8.1 | CDS | 38622242 | 38622334 | 38622242 | ID=cds.MS.gene009084.t1;Parent=MS.gene009084.t1 |
| chr8.1 | exon | 38621188 | 38621667 | 38621188 | ID=MS.gene009084.t1.exon2;Parent=MS.gene009084.t1 |
| chr8.1 | CDS | 38621188 | 38621667 | 38621188 | ID=cds.MS.gene009084.t1;Parent=MS.gene009084.t1 |
| chr8.1 | exon | 38620603 | 38621082 | 38620603 | ID=MS.gene009084.t1.exon3;Parent=MS.gene009084.t1 |
| chr8.1 | CDS | 38620603 | 38621082 | 38620603 | ID=cds.MS.gene009084.t1;Parent=MS.gene009084.t1 |
| chr8.1 | exon | 38619809 | 38620468 | 38619809 | ID=MS.gene009084.t1.exon4;Parent=MS.gene009084.t1 |
| chr8.1 | CDS | 38619809 | 38620468 | 38619809 | ID=cds.MS.gene009084.t1;Parent=MS.gene009084.t1 |
| Gene Sequence |
| Protein sequence |
