Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009149.t1 | KEH19950.1 | 99.1 | 843 | 8 | 0 | 1 | 843 | 13 | 855 | 0.00E+00 | 1590.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009149.t1 | Q9ZUI6 | 73.3 | 840 | 203 | 5 | 1 | 840 | 13 | 831 | 0.0e+00 | 1179.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009149.t1 | A0A072U2F4 | 99.1 | 843 | 8 | 0 | 1 | 843 | 13 | 855 | 0.0e+00 | 1590.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene29095 | MS.gene009149 | PPI |
MS.gene017498 | MS.gene009149 | PPI |
MS.gene006488 | MS.gene009149 | PPI |
MS.gene009149 | MS.gene052323 | PPI |
MS.gene009149 | MS.gene031810 | PPI |
MS.gene75781 | MS.gene009149 | PPI |
MS.gene009149 | MS.gene021005 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009149.t1 | MTR_8g063690 | 99.051 | 843 | 8 | 0 | 1 | 843 | 13 | 855 | 0.0 | 1716 |
MS.gene009149.t1 | MTR_5g034780 | 84.048 | 840 | 123 | 4 | 1 | 840 | 13 | 841 | 0.0 | 1422 |
MS.gene009149.t1 | MTR_2g084610 | 30.066 | 602 | 387 | 13 | 1 | 583 | 12 | 598 | 3.65e-80 | 279 |
MS.gene009149.t1 | MTR_8g072250 | 24.020 | 587 | 404 | 9 | 1 | 565 | 28 | 594 | 1.85e-52 | 198 |
MS.gene009149.t1 | MTR_8g104380 | 23.711 | 485 | 336 | 8 | 14 | 487 | 32 | 493 | 3.23e-29 | 125 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene009149.t1 | AT1G60070 | 73.452 | 840 | 202 | 5 | 1 | 840 | 13 | 831 | 0.0 | 1276 |
MS.gene009149.t1 | AT1G60070 | 70.434 | 876 | 202 | 6 | 1 | 840 | 13 | 867 | 0.0 | 1256 |
MS.gene009149.t1 | AT1G23900 | 73.365 | 841 | 215 | 3 | 1 | 840 | 1 | 833 | 0.0 | 1229 |
MS.gene009149.t1 | AT1G23900 | 73.365 | 841 | 215 | 3 | 1 | 840 | 13 | 845 | 0.0 | 1229 |
MS.gene009149.t1 | AT1G23900 | 73.365 | 841 | 215 | 3 | 1 | 840 | 13 | 845 | 0.0 | 1229 |
MS.gene009149.t1 | AT1G23935 | 74.182 | 275 | 59 | 2 | 1 | 275 | 874 | 1136 | 6.88e-126 | 408 |
MS.gene009149.t1 | AT1G23935 | 53.333 | 180 | 67 | 3 | 489 | 667 | 707 | 870 | 2.93e-40 | 161 |
MS.gene009149.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 494 | 594 | 1130 | 1230 | 2.98e-31 | 132 |
MS.gene009149.t1 | AT1G23935 | 74.182 | 275 | 59 | 2 | 1 | 275 | 873 | 1135 | 7.05e-126 | 408 |
MS.gene009149.t1 | AT1G23935 | 53.631 | 179 | 67 | 2 | 489 | 667 | 707 | 869 | 1.97e-41 | 165 |
MS.gene009149.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 494 | 594 | 1129 | 1229 | 3.11e-31 | 132 |
MS.gene009149.t1 | AT1G23935 | 74.182 | 275 | 59 | 2 | 1 | 275 | 924 | 1186 | 1.13e-125 | 409 |
MS.gene009149.t1 | AT1G23935 | 53.631 | 179 | 67 | 2 | 489 | 667 | 758 | 920 | 1.85e-41 | 165 |
MS.gene009149.t1 | AT1G23935 | 65.347 | 101 | 35 | 0 | 494 | 594 | 1180 | 1280 | 3.00e-31 | 132 |
MS.gene009149.t1 | AT5G22780 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 6.69e-79 | 276 |
MS.gene009149.t1 | AT5G22780 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 6.69e-79 | 276 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT5G22770 | 28.525 | 617 | 408 | 12 | 1 | 598 | 10 | 612 | 1.01e-78 | 275 |
MS.gene009149.t1 | AT1G31730 | 26.405 | 587 | 390 | 11 | 1 | 565 | 28 | 594 | 2.28e-61 | 224 |
MS.gene009149.t1 | AT1G48760 | 23.732 | 493 | 326 | 10 | 14 | 487 | 31 | 492 | 8.89e-29 | 124 |
MS.gene009149.t1 | AT1G48760 | 23.732 | 493 | 326 | 10 | 14 | 487 | 31 | 492 | 8.89e-29 | 124 |
MS.gene009149.t1 | AT1G48760 | 23.732 | 493 | 326 | 10 | 14 | 487 | 31 | 492 | 8.89e-29 | 124 |
Find 163 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCATTCACTTACTGTTAT+TGG | 0.083799 | 8.2:-38125040 | None:intergenic |
TGCTTCTATGACAGATTTAT+TGG | 0.203908 | 8.2:+38127886 | MS.gene009149:CDS |
GGACTTGCTCTTTGTGCTTT+GGG | 0.207114 | 8.2:+38118828 | MS.gene009149:CDS |
TGAGAGGTTGCTGCAATTTC+GGG | 0.218038 | 8.2:+38118896 | MS.gene009149:CDS |
TGAAACTATTGAGCAAATTT+TGG | 0.221383 | 8.2:-38123717 | None:intergenic |
TTGAGAGGTTGCTGCAATTT+CGG | 0.235944 | 8.2:+38118895 | MS.gene009149:CDS |
GCTAAGACTGTTGCGGGAAT+TGG | 0.246312 | 8.2:+38120229 | MS.gene009149:CDS |
TTGCAAAGCATCAAAATATT+AGG | 0.248436 | 8.2:+38126444 | MS.gene009149:CDS |
CTTGGCTACCCCACACATTT+TGG | 0.250975 | 8.2:+38118524 | MS.gene009149:CDS |
AAATGGCACAGATGTTCTTT+TGG | 0.256911 | 8.2:+38127691 | MS.gene009149:CDS |
AAGTCAGTGATCAAGATTTC+AGG | 0.260313 | 8.2:+38123681 | MS.gene009149:CDS |
TTGGTTGTTTGTGGGGTTCC+TGG | 0.265044 | 8.2:-38128105 | None:intergenic |
GAGACATCGTGCAACGATTC+TGG | 0.277385 | 8.2:+38123448 | MS.gene009149:CDS |
ATTGCTTATGACAACAATTA+AGG | 0.289580 | 8.2:-38124779 | None:intergenic |
TGGATACTGTTTCAAAGAAT+TGG | 0.292576 | 8.2:-38118660 | None:intergenic |
TGTAGAAAGGATGCCAGTTT+TGG | 0.299639 | 8.2:+38126578 | MS.gene009149:CDS |
TTGAACACACTCATACAAAA+TGG | 0.308234 | 8.2:-38121643 | None:intergenic |
GGGACTTGCTCTTTGTGCTT+TGG | 0.309614 | 8.2:+38118827 | MS.gene009149:CDS |
CATAAAGGTAGCTTGGATAT+TGG | 0.315097 | 8.2:-38128124 | None:intergenic |
GGATCCAAATATTCGGAAAA+AGG | 0.323278 | 8.2:+38118917 | MS.gene009149:CDS |
TCAGTTTCTTCAGTTGCTCT+TGG | 0.327579 | 8.2:+38128616 | MS.gene009149:intron |
CCTTGAACTTATTTATGTTC+TGG | 0.331374 | 8.2:+38123607 | MS.gene009149:CDS |
ACAGTCTTAGCAATTTGATA+TGG | 0.339446 | 8.2:-38120217 | None:intergenic |
GCTTGGATATTGGTTGTTTG+TGG | 0.344286 | 8.2:-38128114 | None:intergenic |
ACTCCAGCGCCGAGCTCTTC+TGG | 0.350410 | 8.2:+38126747 | MS.gene009149:CDS |
AAAATCTGTATATGCATTAG+AGG | 0.356917 | 8.2:-38128154 | None:intergenic |
AAGGGAACCGATTTCATCAT+TGG | 0.357743 | 8.2:+38127811 | MS.gene009149:CDS |
CAAATTGCTAAGACTGTTGC+GGG | 0.361403 | 8.2:+38120223 | MS.gene009149:CDS |
GAACATTTGTTCAGCAGAAA+TGG | 0.373763 | 8.2:+38118851 | MS.gene009149:CDS |
CCCAGCAACTTTGTTTGACT+CGG | 0.380709 | 8.2:-38121616 | None:intergenic |
CTTGGATATTGGTTGTTTGT+GGG | 0.381909 | 8.2:-38128113 | None:intergenic |
ACCGAGTCAAACAAAGTTGC+TGG | 0.388455 | 8.2:+38121615 | MS.gene009149:CDS |
AATCTTGATCACTGACTTCA+AGG | 0.392658 | 8.2:-38123676 | None:intergenic |
ATTTCCTAAAAGATGAAGTA+TGG | 0.393292 | 8.2:+38124752 | MS.gene009149:CDS |
GGCAATACTCTCCCTGCTAA+TGG | 0.398269 | 8.2:+38128650 | MS.gene009149:CDS |
AAAGTCTCCTCATCCAAAAC+TGG | 0.402237 | 8.2:-38126591 | None:intergenic |
ACATTAGCTTGGACATATTC+CGG | 0.402551 | 8.2:-38118490 | None:intergenic |
TACCACAAAAGAAATGGCTT+TGG | 0.407532 | 8.2:+38125968 | MS.gene009149:CDS |
CTAAGACTGTTGCGGGAATT+GGG | 0.408982 | 8.2:+38120230 | MS.gene009149:CDS |
ATGTGGTGCCTTGGAGAGTA+TGG | 0.411085 | 8.2:+38124974 | MS.gene009149:CDS |
AGCAATTTGATATGGAGAAA+AGG | 0.412858 | 8.2:-38120209 | None:intergenic |
TCACCAGAGTATGATATTGC+TGG | 0.413853 | 8.2:+38120176 | MS.gene009149:CDS |
AGCAATGCTTCCAAGCTTCA+TGG | 0.414636 | 8.2:+38124796 | MS.gene009149:CDS |
ACTTTCAATGCTAGGAGGGC+TGG | 0.417191 | 8.2:+38126609 | MS.gene009149:CDS |
GTAGAAATGCACAGAAGGTT+TGG | 0.419655 | 8.2:+38120118 | MS.gene009149:intron |
AGGTAACCTATTCTCTTCTC+TGG | 0.420513 | 8.2:-38118587 | None:intergenic |
CTTTCAATGCTAGGAGGGCT+GGG | 0.423217 | 8.2:+38126610 | MS.gene009149:CDS |
ATTGAGCCCTTTCCATTAGC+AGG | 0.427221 | 8.2:-38128662 | None:intergenic |
AATTTCGGGATCCAAATATT+CGG | 0.429776 | 8.2:+38118910 | MS.gene009149:CDS |
CCGCGAAGAGAGCTTCAATA+AGG | 0.431659 | 8.2:-38125994 | None:intergenic |
CCAGAACATAAATAAGTTCA+AGG | 0.436916 | 8.2:-38123607 | None:intergenic |
CCTTATTGAAGCTCTCTTCG+CGG | 0.438439 | 8.2:+38125994 | MS.gene009149:CDS |
GCAATTTGATATGGAGAAAA+GGG | 0.440931 | 8.2:-38120208 | None:intergenic |
TGTGCAGGAGGTGATTCAAT+AGG | 0.448975 | 8.2:-38127743 | None:intergenic |
TCACGAGCATCTTCAACTGC+TGG | 0.449881 | 8.2:+38127860 | MS.gene009149:CDS |
GGGAGAGTATTGCCGCTAGC+TGG | 0.454118 | 8.2:-38128641 | None:intergenic |
ATAGATGAGTTGCTTTGTGC+AGG | 0.457462 | 8.2:-38127758 | None:intergenic |
AGATCATCCAATGATGAAAT+CGG | 0.457993 | 8.2:-38127818 | None:intergenic |
AGATCTTACCACAAAAGAAA+TGG | 0.459576 | 8.2:+38125962 | MS.gene009149:CDS |
ATACCTTTGGAACTGCTGCC+TGG | 0.462796 | 8.2:-38128182 | None:intergenic |
GACGCAGCTTCAACTCCAAC+AGG | 0.463349 | 8.2:+38126642 | MS.gene009149:CDS |
GGATTTCCAGAGAAGAGAAT+AGG | 0.466535 | 8.2:+38118581 | MS.gene009149:CDS |
TCATACAAATCAGTATATAG+TGG | 0.470269 | 8.2:+38118806 | MS.gene009149:CDS |
ATTAGAGGACAAATTCATAA+AGG | 0.470342 | 8.2:-38128139 | None:intergenic |
ATTTCAGACGTCAACAGAAC+AGG | 0.476105 | 8.2:+38124846 | MS.gene009149:CDS |
AACTTCTCCCTTCAGATATG+TGG | 0.477009 | 8.2:+38123376 | MS.gene009149:intron |
ACAAATTCATAAAGGTAGCT+TGG | 0.477654 | 8.2:-38128131 | None:intergenic |
TGCAGCAACCTCTCAACCTC+TGG | 0.481063 | 8.2:-38118888 | None:intergenic |
AGGATTCTGATGCTTCAATT+CGG | 0.483694 | 8.2:+38123576 | MS.gene009149:intron |
GAAAATTTACCTTTCCATGT+TGG | 0.487286 | 8.2:-38128712 | None:intergenic |
ATTCTCTTCTCTGGAAATCC+AGG | 0.488886 | 8.2:-38118578 | None:intergenic |
AAATAATAGTTCAGTACAAA+GGG | 0.492254 | 8.2:+38126372 | MS.gene009149:CDS |
GTGCTTGCAATCAATATCCT+TGG | 0.492845 | 8.2:+38121702 | MS.gene009149:CDS |
GGCTGTGAGTGCTGACACTC+AGG | 0.493191 | 8.2:+38123418 | MS.gene009149:CDS |
TACAGTGTATCCATGAAGCT+TGG | 0.498602 | 8.2:-38124806 | None:intergenic |
TTTCGTCAACAAGCAACATA+AGG | 0.502764 | 8.2:-38118613 | None:intergenic |
AACATCCACAGCATCTGATT+CGG | 0.507884 | 8.2:-38125910 | None:intergenic |
TCAGTTGTGTCACAACAGTC+TGG | 0.513473 | 8.2:+38126807 | MS.gene009149:CDS |
ATGAAAATGACCAACACTAC+AGG | 0.514474 | 8.2:+38118465 | MS.gene009149:CDS |
ATGAGGAGACTTTCAATGCT+AGG | 0.517669 | 8.2:+38126601 | MS.gene009149:CDS |
GAAATAATAGTTCAGTACAA+AGG | 0.518955 | 8.2:+38126371 | MS.gene009149:CDS |
TCTCTTAGTAAGCCAGTAGC+AGG | 0.520381 | 8.2:-38119455 | None:intergenic |
GACTTGCTCTTTGTGCTTTG+GGG | 0.523324 | 8.2:+38118829 | MS.gene009149:CDS |
CTACCAGAAGAGCTCGGCGC+TGG | 0.524504 | 8.2:-38126750 | None:intergenic |
CAAAGCTTACCACTTGCTGA+TGG | 0.524848 | 8.2:-38127926 | None:intergenic |
ACAGATTTGACAACTCCATT+CGG | 0.525220 | 8.2:-38126681 | None:intergenic |
TACTCTCCCTGCTAATGGAA+AGG | 0.526380 | 8.2:+38128655 | MS.gene009149:CDS |
TCCATTTGACCAAAATGTGT+GGG | 0.528861 | 8.2:-38118533 | None:intergenic |
CGTGTTGCAATGTGGTGCCT+TGG | 0.531783 | 8.2:+38124965 | MS.gene009149:CDS |
ACTCTCCCTGCTAATGGAAA+GGG | 0.532051 | 8.2:+38128656 | MS.gene009149:CDS |
CTCAAGTTGATATCATCTCC+TGG | 0.532466 | 8.2:+38118560 | MS.gene009149:CDS |
CTAATGTTCATCCACATGCT+TGG | 0.535489 | 8.2:+38118506 | MS.gene009149:CDS |
TGCTTGCAAAACTGCGGCAG+AGG | 0.537918 | 8.2:+38118394 | MS.gene009149:CDS |
TTTGCTGCAATTCTAGCACT+AGG | 0.538532 | 8.2:-38126397 | None:intergenic |
CATGTGGATGAACATTAGCT+TGG | 0.545929 | 8.2:-38118501 | None:intergenic |
GGCTCGTGACCTTGCACCAG+AGG | 0.547470 | 8.2:+38118872 | MS.gene009149:CDS |
TTCATCAATTGAAGCGCGAA+TGG | 0.547680 | 8.2:-38118447 | None:intergenic |
AGGTTTGGTGAGAACTCTAA+AGG | 0.547914 | 8.2:+38120133 | MS.gene009149:CDS |
CTCTCGAATGCAGTTATAGA+CGG | 0.549489 | 8.2:-38128045 | None:intergenic |
TTGGATATTGGTTGTTTGTG+GGG | 0.553313 | 8.2:-38128112 | None:intergenic |
AGCTCTTGAACATATTAGAA+AGG | 0.554006 | 8.2:+38119544 | MS.gene009149:CDS |
TTGTCTTGAATAGAAAACAA+TGG | 0.554459 | 8.2:+38128012 | MS.gene009149:intron |
GGCACTGAACATGCTGATGA+AGG | 0.554525 | 8.2:+38123397 | MS.gene009149:CDS |
AGACTAACTGAAGGTCCTGT+TGG | 0.555016 | 8.2:-38126657 | None:intergenic |
AGTCAGTGATCAAGATTTCA+GGG | 0.555114 | 8.2:+38123682 | MS.gene009149:CDS |
TATTCCGGTGCCTGTAGTGT+TGG | 0.557877 | 8.2:-38118475 | None:intergenic |
ACCTCTCAACCTCTGGTGCA+AGG | 0.558056 | 8.2:-38118881 | None:intergenic |
GCAGTTCTACACTTGTAGAA+AGG | 0.559300 | 8.2:+38126565 | MS.gene009149:intron |
TACTAACAGCCAACATGGAA+AGG | 0.559428 | 8.2:+38128703 | MS.gene009149:CDS |
CAAATCGGGATAACAATACC+AGG | 0.560072 | 8.2:+38121736 | MS.gene009149:CDS |
ATATCATACTCTGTACAAGA+AGG | 0.560662 | 8.2:-38126020 | None:intergenic |
TCAAATTGCTAAGACTGTTG+CGG | 0.564454 | 8.2:+38120222 | MS.gene009149:CDS |
GAGAAGAGAATAGGTTACCT+TGG | 0.569333 | 8.2:+38118590 | MS.gene009149:CDS |
GATCTGGTACATTGATCAGA+TGG | 0.569583 | 8.2:+38124282 | MS.gene009149:CDS |
TTCAATCTCTCAAAACAGCC+AGG | 0.570001 | 8.2:+38128087 | MS.gene009149:CDS |
TTCCATTTGACCAAAATGTG+TGG | 0.570770 | 8.2:-38118534 | None:intergenic |
ATGACCAACACTACAGGCAC+CGG | 0.571692 | 8.2:+38118471 | MS.gene009149:CDS |
AGATCAAGCAAATCTAGAAG+TGG | 0.571823 | 8.2:-38126708 | None:intergenic |
AGAGTTACTAACAGCCAACA+TGG | 0.576120 | 8.2:+38128698 | MS.gene009149:CDS |
CACTGTAAGAGCATTATACA+AGG | 0.576802 | 8.2:+38124822 | MS.gene009149:CDS |
GATGGTTAAGATTCTGTCCA+AGG | 0.577562 | 8.2:+38124300 | MS.gene009149:CDS |
AAGACAAGAAGTTCTAATGT+TGG | 0.577873 | 8.2:+38118634 | MS.gene009149:CDS |
CATAAAGAAAGTCCCAGACC+TGG | 0.578337 | 8.2:+38119415 | MS.gene009149:CDS |
ACCTTGCACCAGAGGTTGAG+AGG | 0.580430 | 8.2:+38118880 | MS.gene009149:CDS |
CATACAAATCAGTATATAGT+GGG | 0.580791 | 8.2:+38118807 | MS.gene009149:CDS |
GCCTCTGGCCCATCAGCAAG+TGG | 0.583733 | 8.2:+38127917 | MS.gene009149:CDS |
CCGAGTCAAACAAAGTTGCT+GGG | 0.584005 | 8.2:+38121616 | MS.gene009149:CDS |
ATGCCAGCAATATCATACTC+TGG | 0.585818 | 8.2:-38120179 | None:intergenic |
AAAGCTTACCACTTGCTGAT+GGG | 0.586473 | 8.2:-38127925 | None:intergenic |
TTGAATAGAAAACAATGGAT+CGG | 0.589436 | 8.2:+38128017 | MS.gene009149:intron |
CAATGTACCAGATCTTCTCA+AGG | 0.590800 | 8.2:-38124273 | None:intergenic |
TTTCCAGGCAGCAGTTCCAA+AGG | 0.593047 | 8.2:+38128179 | MS.gene009149:CDS |
TTGAGCCCTTTCCATTAGCA+GGG | 0.593488 | 8.2:-38128661 | None:intergenic |
TATGAACGACATACTTGCCC+AGG | 0.596648 | 8.2:+38120280 | MS.gene009149:CDS |
GATGAGTTGCTTTGTGCAGG+AGG | 0.598544 | 8.2:-38127755 | None:intergenic |
CATTCGAGAGCAGCTCCTTG+AGG | 0.599217 | 8.2:+38128058 | MS.gene009149:CDS |
ACCACTTGCTGATGGGCCAG+AGG | 0.599354 | 8.2:-38127918 | None:intergenic |
GGTGATTCAATAGGTGCAGA+AGG | 0.600011 | 8.2:-38127734 | None:intergenic |
CAGAACATAAATAAGTTCAA+GGG | 0.606658 | 8.2:-38123606 | None:intergenic |
CAACAAGCAACATAAGGCCA+AGG | 0.611915 | 8.2:-38118607 | None:intergenic |
ATAAGTCGCCATACTCTCCA+AGG | 0.612690 | 8.2:-38124982 | None:intergenic |
GGTCACCGAATCAGATGCTG+TGG | 0.614079 | 8.2:+38125905 | MS.gene009149:intron |
CCTTCAGTTAGTCTTCCGAA+TGG | 0.616811 | 8.2:+38126666 | MS.gene009149:CDS |
TTATTGTAGAAATGCACAGA+AGG | 0.617727 | 8.2:+38120113 | MS.gene009149:intron |
TATCATACTCTGTACAAGAA+GGG | 0.623158 | 8.2:-38126019 | None:intergenic |
AGGAGACTTTCAATGCTAGG+AGG | 0.624598 | 8.2:+38126604 | MS.gene009149:CDS |
ATAATGAGCATTGAAGATAA+CGG | 0.625734 | 8.2:+38121669 | MS.gene009149:CDS |
GAGATTGAATGTCAACCTCA+AGG | 0.626614 | 8.2:-38128073 | None:intergenic |
TTACTAAGAGAGAAGCATCA+TGG | 0.629530 | 8.2:+38119467 | MS.gene009149:CDS |
TTGTGGTAAGATCTGATGCA+TGG | 0.635838 | 8.2:-38125953 | None:intergenic |
CTGTTGCGGGAATTGGGCGA+AGG | 0.636293 | 8.2:+38120236 | MS.gene009149:CDS |
AATGTACCAGATCTTCTCAA+GGG | 0.641590 | 8.2:-38124272 | None:intergenic |
AAATCACTACCAGAAGAGCT+CGG | 0.643691 | 8.2:-38126756 | None:intergenic |
CCATTTGACCAAAATGTGTG+GGG | 0.650020 | 8.2:-38118532 | None:intergenic |
GGAGACTTTCAATGCTAGGA+GGG | 0.651603 | 8.2:+38126605 | MS.gene009149:CDS |
GAATGGAGTTGTCAAATCTG+TGG | 0.652542 | 8.2:+38126683 | MS.gene009149:CDS |
CAGGAGATGATATCAACTTG+AGG | 0.660137 | 8.2:-38118559 | None:intergenic |
CCATTCGGAAGACTAACTGA+AGG | 0.679774 | 8.2:-38126666 | None:intergenic |
ATGAGCATTGAAGATAACGG+TGG | 0.685116 | 8.2:+38121672 | MS.gene009149:CDS |
TTGCTCTTGGATCCAGCTAG+CGG | 0.698582 | 8.2:+38128629 | MS.gene009149:CDS |
GTGTGGGGTAGCCAAGCATG+TGG | 0.704313 | 8.2:-38118517 | None:intergenic |
CATACGTGCTTGCAAAACTG+CGG | 0.708095 | 8.2:+38118388 | MS.gene009149:CDS |
CAGTGATCAAGATTTCAGGG+AGG | 0.799054 | 8.2:+38123685 | MS.gene009149:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 38118377 | 38128783 | 38118377 | ID=MS.gene009149 |
chr8.2 | mRNA | 38118377 | 38128783 | 38118377 | ID=MS.gene009149.t1;Parent=MS.gene009149 |
chr8.2 | exon | 38118377 | 38118675 | 38118377 | ID=MS.gene009149.t1.exon1;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38118377 | 38118675 | 38118377 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38118797 | 38118938 | 38118797 | ID=MS.gene009149.t1.exon2;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38118797 | 38118938 | 38118797 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38119392 | 38119565 | 38119392 | ID=MS.gene009149.t1.exon3;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38119392 | 38119565 | 38119392 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38120122 | 38120301 | 38120122 | ID=MS.gene009149.t1.exon4;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38120122 | 38120301 | 38120122 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38121603 | 38121757 | 38121603 | ID=MS.gene009149.t1.exon5;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38121603 | 38121757 | 38121603 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38123391 | 38123481 | 38123391 | ID=MS.gene009149.t1.exon6;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38123391 | 38123481 | 38123391 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38123578 | 38123741 | 38123578 | ID=MS.gene009149.t1.exon7;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38123578 | 38123741 | 38123578 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38124267 | 38124321 | 38124267 | ID=MS.gene009149.t1.exon8;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38124267 | 38124321 | 38124267 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38124745 | 38124867 | 38124745 | ID=MS.gene009149.t1.exon9;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38124745 | 38124867 | 38124745 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38124953 | 38125048 | 38124953 | ID=MS.gene009149.t1.exon10;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38124953 | 38125048 | 38124953 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38125906 | 38126033 | 38125906 | ID=MS.gene009149.t1.exon11;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38125906 | 38126033 | 38125906 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38126361 | 38126465 | 38126361 | ID=MS.gene009149.t1.exon12;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38126361 | 38126465 | 38126361 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38126569 | 38126828 | 38126569 | ID=MS.gene009149.t1.exon13;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38126569 | 38126828 | 38126569 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38127672 | 38127938 | 38127672 | ID=MS.gene009149.t1.exon14;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38127672 | 38127938 | 38127672 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38128025 | 38128200 | 38128025 | ID=MS.gene009149.t1.exon15;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38128025 | 38128200 | 38128025 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38128620 | 38128724 | 38128620 | ID=MS.gene009149.t1.exon16;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38128620 | 38128724 | 38128620 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
chr8.2 | exon | 38128772 | 38128783 | 38128772 | ID=MS.gene009149.t1.exon17;Parent=MS.gene009149.t1 |
chr8.2 | CDS | 38128772 | 38128783 | 38128772 | ID=cds.MS.gene009149.t1;Parent=MS.gene009149.t1 |
Gene Sequence |
Protein sequence |