Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010426.t1 | XP_003611854.2 | 94.9 | 455 | 22 | 1 | 1 | 454 | 1 | 455 | 2.30E-205 | 724.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010426.t1 | G7K9G9 | 94.9 | 455 | 22 | 1 | 1 | 454 | 1 | 455 | 1.6e-205 | 724.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010426 | MS.gene063067 | PPI |
| MS.gene010426 | MS.gene014181 | PPI |
| MS.gene68113 | MS.gene010426 | PPI |
| MS.gene010426 | MS.gene68716 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010426.t1 | MTR_5g018600 | 95.604 | 455 | 19 | 1 | 1 | 454 | 1 | 455 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene010426.t1 | AT4G37210 | 50.117 | 429 | 168 | 10 | 56 | 451 | 74 | 489 | 2.43e-120 | 360 |
| MS.gene010426.t1 | AT4G37210 | 50.318 | 314 | 123 | 4 | 56 | 348 | 74 | 375 | 7.84e-90 | 278 |
Find 123 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGGAAGCCGTTGCTTATT+TGG | 0.172827 | 5.4:+11188776 | MS.gene010426:CDS |
| ATCTCAGCGAGAATTGATTT+TGG | 0.224515 | 5.4:-11189067 | None:intergenic |
| ACCAAAATCATTCTCCTTCA+TGG | 0.252070 | 5.4:-11186170 | None:intergenic |
| ATCAACAGAGTTGCCCATTA+TGG | 0.268360 | 5.4:+11187191 | MS.gene010426:intron |
| GCCATGAAGGAGAATGATTT+TGG | 0.276030 | 5.4:+11186169 | MS.gene010426:CDS |
| TGGAGACTCCTCCTGCTTCT+TGG | 0.302677 | 5.4:-11187309 | None:intergenic |
| ATCTTCCTGGTCGTTCTTAC+CGG | 0.304993 | 5.4:-11188161 | None:intergenic |
| CCTCCAAACACAAGCATATA+CGG | 0.321319 | 5.4:-11188740 | None:intergenic |
| TATCAACTTGTTCCATAGTA+TGG | 0.325848 | 5.4:-11188297 | None:intergenic |
| CGGGAGCAAGTTCACCATAA+TGG | 0.339759 | 5.4:-11187205 | None:intergenic |
| CACTATCCTCATCATCTTCC+TGG | 0.352582 | 5.4:-11188174 | None:intergenic |
| TCTTCGGTTGTTTCTAATGC+TGG | 0.357966 | 5.4:-11189310 | None:intergenic |
| GGAGACTCCTCCTGCTTCTT+GGG | 0.358489 | 5.4:-11187308 | None:intergenic |
| GTCCACACATACTACAAATA+TGG | 0.368782 | 5.4:+11187233 | MS.gene010426:CDS |
| CTGGTTCAACCAGCTGTTCT+AGG | 0.369035 | 5.4:-11188496 | None:intergenic |
| TTTCCGTATATGCTTGTGTT+TGG | 0.380312 | 5.4:+11188737 | MS.gene010426:CDS |
| CGCAGGTCTCTCAAGTGAAC+TGG | 0.386407 | 5.4:+11188926 | MS.gene010426:CDS |
| TTCCTTTCCACTGCCTGCCT+TGG | 0.387277 | 5.4:-11189101 | None:intergenic |
| AGACGAGTCTGACCTGGATT+TGG | 0.388595 | 5.4:+11188225 | MS.gene010426:CDS |
| AAAGCAATCTGTCCATACTA+TGG | 0.392176 | 5.4:+11188285 | MS.gene010426:CDS |
| TCAGGAGGAAGCCGATCCTT+TGG | 0.393753 | 5.4:+11187277 | MS.gene010426:CDS |
| GGGAGCAAGTTCACCATAAT+GGG | 0.399197 | 5.4:-11187204 | None:intergenic |
| TCAGCAATGTTTCTATCATC+TGG | 0.400267 | 5.4:-11188515 | None:intergenic |
| GTTGCGGCGGATTCCACGGC+GGG | 0.401870 | 5.4:-11186073 | None:intergenic |
| GGATTCCACGGCGGGGTTGA+CGG | 0.406936 | 5.4:-11186065 | None:intergenic |
| CAGGAGGAAGCCGATCCTTT+GGG | 0.407516 | 5.4:+11187278 | MS.gene010426:CDS |
| CTAGGATGGATAGAGCCTTC+TGG | 0.419799 | 5.4:-11188478 | None:intergenic |
| GTCACACATCTTGGTGTAGT+AGG | 0.440218 | 5.4:+11189229 | MS.gene010426:CDS |
| CCGTATATGCTTGTGTTTGG+AGG | 0.449286 | 5.4:+11188740 | MS.gene010426:CDS |
| GGCTGATGAGCTGATGGAAA+AGG | 0.453203 | 5.4:+11186138 | MS.gene010426:CDS |
| CGCAATTGAGTTATTAGTCT+CGG | 0.463063 | 5.4:-11188877 | None:intergenic |
| ATAGCCGTGCTCTTGAGATC+AGG | 0.468923 | 5.4:+11186209 | MS.gene010426:CDS |
| CTTCACAGGTCCATCTTTGT+CGG | 0.471230 | 5.4:-11187339 | None:intergenic |
| GTGGTTTAGGGTTCCGTCGA+CGG | 0.471495 | 5.4:-11186026 | None:intergenic |
| AAATAAGCAACGGCTTCCTC+AGG | 0.479407 | 5.4:-11188774 | None:intergenic |
| GAAGGCTACATCTGTTTGTA+AGG | 0.480775 | 5.4:+11188800 | MS.gene010426:CDS |
| GTGACAGGTTCGGTTGGTTG+AGG | 0.484148 | 5.4:-11186001 | None:intergenic |
| AACATTGGCAGATGTTGCTC+TGG | 0.486208 | 5.4:+11188327 | MS.gene010426:CDS |
| CAGCGACGGTCAGAAGTCTC+TGG | 0.487381 | 5.4:+11186111 | MS.gene010426:CDS |
| CATTATCCACTTCTGACTCC+TGG | 0.495772 | 5.4:-11187433 | None:intergenic |
| CTCAAGTGAACTGGAAAAGA+AGG | 0.499187 | 5.4:+11188935 | MS.gene010426:CDS |
| GCTCACACCAATGGATCTGC+TGG | 0.500908 | 5.4:+11189205 | MS.gene010426:CDS |
| CAGGAGTCAGAAGTGGATAA+TGG | 0.501825 | 5.4:+11187434 | MS.gene010426:CDS |
| GGGTGCTGTTCCCAAGAAGC+AGG | 0.502021 | 5.4:+11187298 | MS.gene010426:CDS |
| GTTCCGTCGACGGCTGTGAC+AGG | 0.511248 | 5.4:-11186016 | None:intergenic |
| CCACATGGCGCCGACAAAGA+TGG | 0.513330 | 5.4:+11187329 | MS.gene010426:CDS |
| TCTGCTGGAGTCACACATCT+TGG | 0.516862 | 5.4:+11189220 | MS.gene010426:CDS |
| TCTATCCATCCTAGAACAGC+TGG | 0.517147 | 5.4:+11188487 | MS.gene010426:CDS |
| GTCGACGGCTGTGACAGGTT+CGG | 0.517732 | 5.4:-11186011 | None:intergenic |
| GCATTCATAGCACCCTTCAC+AGG | 0.519577 | 5.4:-11187353 | None:intergenic |
| ATTGGTGTGAGCGGTTGAAA+TGG | 0.519732 | 5.4:-11189194 | None:intergenic |
| ATCCGCCGCAACTTCCGCTC+CGG | 0.519956 | 5.4:+11186084 | MS.gene010426:CDS |
| CAGAGACTTCTGACCGTCGC+TGG | 0.521638 | 5.4:-11186110 | None:intergenic |
| TCCGCTCCGGCGTCCAGCGA+CGG | 0.522352 | 5.4:+11186097 | MS.gene010426:CDS |
| CGACAAAGATGGACCTGTGA+AGG | 0.523351 | 5.4:+11187340 | MS.gene010426:CDS |
| TGCACTGTTATACAAGGCTC+AGG | 0.523635 | 5.4:+11187259 | MS.gene010426:CDS |
| TGATGAAGACGAGTCTGACC+TGG | 0.523764 | 5.4:+11188219 | MS.gene010426:CDS |
| GTGTGAGCGGTTGAAATGGT+TGG | 0.526499 | 5.4:-11189190 | None:intergenic |
| GCATCTGCCAAGGCAGGCAG+TGG | 0.528560 | 5.4:+11189094 | MS.gene010426:CDS |
| CGCCGGAGCGGAAGTTGCGG+CGG | 0.530654 | 5.4:-11186086 | None:intergenic |
| ATTCTAGCATCTGCCAAGGC+AGG | 0.536075 | 5.4:+11189088 | MS.gene010426:CDS |
| AGCCGTTGCTTATTTGGAGA+AGG | 0.538307 | 5.4:+11188782 | MS.gene010426:CDS |
| GGACATGGCTGATGAGCTGA+TGG | 0.539014 | 5.4:+11186132 | MS.gene010426:CDS |
| AGTTGGAGTTTCTTCAACCA+TGG | 0.544227 | 5.4:-11185954 | None:intergenic |
| GGATAGTGATACTGAAGAGT+TGG | 0.545697 | 5.4:+11188189 | MS.gene010426:CDS |
| TCACACATCTTGGTGTAGTA+GGG | 0.546130 | 5.4:+11189230 | MS.gene010426:CDS |
| GCAGATGTTGCTCTGGAAAG+AGG | 0.547971 | 5.4:+11188334 | MS.gene010426:CDS |
| CGGTCAGAAGTCTCTGGACA+TGG | 0.548472 | 5.4:+11186117 | MS.gene010426:CDS |
| GGAAGTTGCGGCGGATTCCA+CGG | 0.552182 | 5.4:-11186077 | None:intergenic |
| TTCAACCAGCTGTTCTAGGA+TGG | 0.560558 | 5.4:-11188492 | None:intergenic |
| AAAGGGAAACAAGGCCATGA+AGG | 0.561352 | 5.4:+11186156 | MS.gene010426:CDS |
| TTCTGACCGTCGCTGGACGC+CGG | 0.564518 | 5.4:-11186103 | None:intergenic |
| CCATCTTTGTCGGCGCCATG+TGG | 0.566588 | 5.4:-11187329 | None:intergenic |
| ATTTCAACCGCTCACACCAA+TGG | 0.569574 | 5.4:+11189196 | MS.gene010426:CDS |
| GGACGCCGGAGCGGAAGTTG+CGG | 0.569781 | 5.4:-11186089 | None:intergenic |
| GTAGTATGTGTGGACACACT+CGG | 0.570065 | 5.4:-11187225 | None:intergenic |
| AACCATATTTGTAGTATGTG+TGG | 0.571397 | 5.4:-11187235 | None:intergenic |
| AATGCTTGCTTCTGCCACGC+TGG | 0.573158 | 5.4:-11189278 | None:intergenic |
| CATCTTGGTGTAGTAGGGAG+AGG | 0.573263 | 5.4:+11189235 | MS.gene010426:CDS |
| TGTGACTCCAGCAGATCCAT+TGG | 0.573283 | 5.4:-11189212 | None:intergenic |
| ACGGCTGTGACAGGTTCGGT+TGG | 0.577242 | 5.4:-11186007 | None:intergenic |
| ACGGAAGTCTCAGATGCAGT+TGG | 0.578153 | 5.4:-11185971 | None:intergenic |
| GGGAACAGCACCCAAAGGAT+CGG | 0.585670 | 5.4:-11187288 | None:intergenic |
| AGCAGATCCATTGGTGTGAG+CGG | 0.586600 | 5.4:-11189203 | None:intergenic |
| AAGAGTGAGCTCCTCACAGT+TGG | 0.588916 | 5.4:+11189135 | MS.gene010426:CDS |
| GCTGATGAGCTGATGGAAAA+GGG | 0.592738 | 5.4:+11186139 | MS.gene010426:CDS |
| AAACAACCAGGAGTCAGAAG+TGG | 0.594428 | 5.4:+11187427 | MS.gene010426:CDS |
| ACCGTCGCTGGACGCCGGAG+CGG | 0.603097 | 5.4:-11186098 | None:intergenic |
| GAACCTGTCACAGCCGTCGA+CGG | 0.603391 | 5.4:+11186013 | MS.gene010426:CDS |
| TGGTTGTGCACTGTTATACA+AGG | 0.606143 | 5.4:+11187253 | MS.gene010426:CDS |
| TGCCAAGGCAGGCAGTGGAA+AGG | 0.606956 | 5.4:+11189099 | MS.gene010426:CDS |
| AGTCTGACCTGGATTTGGCA+TGG | 0.608986 | 5.4:+11188230 | MS.gene010426:CDS |
| GAGCTCACTCTTGCTAGAGA+TGG | 0.609882 | 5.4:-11189124 | None:intergenic |
| GACAAAGATGGACCTGTGAA+GGG | 0.610152 | 5.4:+11187341 | MS.gene010426:CDS |
| TAGTATGTGTGGACACACTC+GGG | 0.612826 | 5.4:-11187224 | None:intergenic |
| TTCCACGGCGGGGTTGACGG+TGG | 0.613242 | 5.4:-11186062 | None:intergenic |
| GGAGGTTAGTTCAAAACCTG+AGG | 0.614213 | 5.4:+11188758 | MS.gene010426:CDS |
| TTCTTGGGAACAGCACCCAA+AGG | 0.615458 | 5.4:-11187293 | None:intergenic |
| GAACGACCAGGAAGATGATG+AGG | 0.618052 | 5.4:+11188168 | MS.gene010426:CDS |
| CGAGACTAATAACTCAATTG+CGG | 0.622926 | 5.4:+11188878 | MS.gene010426:CDS |
| ATTGCTTGCAAAAGATGCAG+TGG | 0.625303 | 5.4:-11187384 | None:intergenic |
| AGTTGATATACTATCAACAT+TGG | 0.628260 | 5.4:+11188312 | MS.gene010426:CDS |
| GCAGAAATTGAAACTCTCGC+AGG | 0.629007 | 5.4:+11188909 | MS.gene010426:CDS |
| GCTGATGGAAAAGGGAAACA+AGG | 0.630536 | 5.4:+11186147 | MS.gene010426:CDS |
| AGCCTTCTCCAAATAAGCAA+CGG | 0.630794 | 5.4:-11188784 | None:intergenic |
| GGTTGGTTGAGGCATTGTGA+CGG | 0.637516 | 5.4:-11185990 | None:intergenic |
| AACCACCGTCAACCCCGCCG+TGG | 0.638823 | 5.4:+11186060 | MS.gene010426:CDS |
| TTGGCTACAGAGAACAGCAG+TGG | 0.641006 | 5.4:+11189154 | MS.gene010426:CDS |
| TGAACCTGATCTCAAGAGCA+CGG | 0.642142 | 5.4:-11186213 | None:intergenic |
| AGTTGCGGCGGATTCCACGG+CGG | 0.642852 | 5.4:-11186074 | None:intergenic |
| GATACTGAAGAGTTGGCAGA+AGG | 0.643075 | 5.4:+11188196 | MS.gene010426:CDS |
| ATCTCTCTCTGACTACCAGA+AGG | 0.643674 | 5.4:+11188463 | MS.gene010426:CDS |
| ACAACCGAAGAGAAAAGTGA+TGG | 0.651076 | 5.4:+11189322 | MS.gene010426:CDS |
| AAGCAGGAGGAGTCTCCACA+TGG | 0.654637 | 5.4:+11187314 | MS.gene010426:CDS |
| GGACGTGACTTCAAACAACC+AGG | 0.655621 | 5.4:+11187415 | MS.gene010426:CDS |
| ACTGTTATACAAGGCTCAGG+AGG | 0.655923 | 5.4:+11187262 | MS.gene010426:CDS |
| ACCGAAGAGAAAAGTGATGG+TGG | 0.656455 | 5.4:+11189325 | MS.gene010426:CDS |
| TGCTGTTCCCAAGAAGCAGG+AGG | 0.664556 | 5.4:+11187301 | MS.gene010426:CDS |
| TGAGATTCTAGCATCTGCCA+AGG | 0.664765 | 5.4:+11189084 | MS.gene010426:CDS |
| AGTGTCCGGTAAGAACGACC+AGG | 0.691630 | 5.4:+11188156 | MS.gene010426:intron |
| GCGATCATCAAATGCCAGCG+TGG | 0.691972 | 5.4:+11189264 | MS.gene010426:CDS |
| GTTCTCTGTAGCCAACTGTG+AGG | 0.704965 | 5.4:-11189146 | None:intergenic |
| TTGCGGCGGATTCCACGGCG+GGG | 0.708348 | 5.4:-11186072 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAAAATAAATGTAAGA+TGG | - | chr5.4:11188368-11188387 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAACATTTAAAC+AGG | - | chr5.4:11188599-11188618 | None:intergenic | 10.0% |
| !! | ATTAATAATTTCTCCAATTT+AGG | + | chr5.4:11188660-11188679 | MS.gene010426:intron | 15.0% |
| !! | TTAGTTATCATAACAATATT+GGG | + | chr5.4:11186979-11186998 | MS.gene010426:intron | 15.0% |
| !!! | TAATATCTGAAATTTGAAAT+AGG | + | chr5.4:11186909-11186928 | MS.gene010426:intron | 15.0% |
| !!! | TATGTTATTTTGATATAACA+TGG | + | chr5.4:11188997-11189016 | MS.gene010426:intron | 15.0% |
| !!! | TTTTTTTTTAACAACAATTC+AGG | - | chr5.4:11187917-11187936 | None:intergenic | 15.0% |
| !! | CTTAGTTATCATAACAATAT+TGG | + | chr5.4:11186978-11186997 | MS.gene010426:intron | 20.0% |
| !! | TATTAATTGATGAAACGAAA+TGG | + | chr5.4:11186873-11186892 | MS.gene010426:intron | 20.0% |
| !! | TCAAAATAATAATCATGACA+AGG | - | chr5.4:11188548-11188567 | None:intergenic | 20.0% |
| !!! | AATAGATAGAAAGTGTTTTA+TGG | + | chr5.4:11187596-11187615 | MS.gene010426:intron | 20.0% |
| !!! | ACATATAATTGATTTGTACA+TGG | - | chr5.4:11187101-11187120 | None:intergenic | 20.0% |
| !!! | ACTAAAATGAGAACATTTTA+CGG | + | chr5.4:11187492-11187511 | MS.gene010426:intron | 20.0% |
| !!! | ATAGACATTTTATTCTCAAA+AGG | + | chr5.4:11186791-11186810 | MS.gene010426:intron | 20.0% |
| !!! | ATTTCTTATTTCACAAGTTA+AGG | - | chr5.4:11188718-11188737 | None:intergenic | 20.0% |
| !!! | CATATAATTGATTTGTACAT+GGG | - | chr5.4:11187100-11187119 | None:intergenic | 20.0% |
| ! | TCTAAAAGTTGAATTGTTTC+TGG | + | chr5.4:11188411-11188430 | MS.gene010426:intron | 25.0% |
| ! | TTCCACATAAATAGAGAATA+AGG | - | chr5.4:11187657-11187676 | None:intergenic | 25.0% |
| ! | TTCCTTATTCTCTATTTATG+TGG | + | chr5.4:11187652-11187671 | MS.gene010426:intron | 25.0% |
| ! | TTGATATAACATGGAATGTA+TGG | + | chr5.4:11189006-11189025 | MS.gene010426:intron | 25.0% |
| !! | AGTTGATATACTATCAACAT+TGG | + | chr5.4:11188312-11188331 | MS.gene010426:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+TGG | + | chr5.4:11186686-11186705 | MS.gene010426:intron | 25.0% |
| !! | CTAAAAGTTGAATTGTTTCT+GGG | + | chr5.4:11188412-11188431 | MS.gene010426:intron | 25.0% |
| !! | GATCTTTAGGTTAAATGATT+GGG | + | chr5.4:11186334-11186353 | MS.gene010426:intron | 25.0% |
| !! | TGATCTTTAGGTTAAATGAT+TGG | + | chr5.4:11186333-11186352 | MS.gene010426:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACT+GGG | + | chr5.4:11186687-11186706 | MS.gene010426:intron | 25.0% |
| !!! | AAATGTTCTCATTTTAGTGA+AGG | - | chr5.4:11187490-11187509 | None:intergenic | 25.0% |
| !!! | AACAATTCAACTTTTAGAAC+TGG | - | chr5.4:11188409-11188428 | None:intergenic | 25.0% |
| !!! | AAGATGTTATTGTCTTGTTT+TGG | + | chr5.4:11186724-11186743 | MS.gene010426:intron | 25.0% |
| !!! | ACAATTCAACTTTTAGAACT+GGG | - | chr5.4:11188408-11188427 | None:intergenic | 25.0% |
| !!! | ACTATTTCTTTCACTTTTCT+TGG | + | chr5.4:11188049-11188068 | MS.gene010426:intron | 25.0% |
| !!! | ATGGCAATGTTTTTAATGAA+AGG | + | chr5.4:11187615-11187634 | MS.gene010426:intron | 25.0% |
| !!! | TGGCAATGTTTTTAATGAAA+GGG | + | chr5.4:11187616-11187635 | MS.gene010426:intron | 25.0% |
| !!! | TTTTTTAACAACAATTCAGG+AGG | - | chr5.4:11187914-11187933 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGCATAAGCTATG+TGG | - | chr5.4:11186591-11186610 | None:intergenic | 25.0% |
| AAAAAAACCTCCTGAATTGT+TGG | + | chr5.4:11187938-11187957 | MS.gene010426:intron | 30.0% | |
| AAAAAACCTCCTGAATTGTT+GGG | + | chr5.4:11187939-11187958 | MS.gene010426:intron | 30.0% | |
| AAAATGAAACAACATACGAG+TGG | + | chr5.4:11188615-11188634 | MS.gene010426:intron | 30.0% | |
| AACAATATTGGGAAACTCTT+TGG | + | chr5.4:11186990-11187009 | MS.gene010426:intron | 30.0% | |
| AACCATATTTGTAGTATGTG+TGG | - | chr5.4:11187238-11187257 | None:intergenic | 30.0% | |
| AAGGAAAAAATTCCCTGATT+AGG | - | chr5.4:11187755-11187774 | None:intergenic | 30.0% | |
| ACGTAAAATGCTTTAACCAT+GGG | - | chr5.4:11187873-11187892 | None:intergenic | 30.0% | |
| AGCTTAATTGTGAATGAAAC+TGG | - | chr5.4:11186434-11186453 | None:intergenic | 30.0% | |
| AGGAAAAAATTCCCTGATTA+GGG | - | chr5.4:11187754-11187773 | None:intergenic | 30.0% | |
| CTATAATCAAGCAATTAAGC+AGG | - | chr5.4:11186775-11186794 | None:intergenic | 30.0% | |
| GCTTAATTGTGAATGAAACT+GGG | - | chr5.4:11186433-11186452 | None:intergenic | 30.0% | |
| TAAATGATTGGGAATTGAGT+TGG | + | chr5.4:11186345-11186364 | MS.gene010426:intron | 30.0% | |
| TAACATCTTACTATAGTGCA+TGG | - | chr5.4:11186713-11186732 | None:intergenic | 30.0% | |
| TAATCACCTAAGTTGTAGTT+TGG | + | chr5.4:11188088-11188107 | MS.gene010426:intron | 30.0% | |
| TACGTAAAATGCTTTAACCA+TGG | - | chr5.4:11187874-11187893 | None:intergenic | 30.0% | |
| TATTTGACATGATGAGTAGA+AGG | - | chr5.4:11187577-11187596 | None:intergenic | 30.0% | |
| TGTATGATATTAATCTGCGT+TGG | + | chr5.4:11187534-11187553 | MS.gene010426:intron | 30.0% | |
| TTTGCTAGCTATCACAAATA+TGG | - | chr5.4:11188001-11188020 | None:intergenic | 30.0% | |
| ! | CTGAAATTTGAAATAGGTCA+GGG | + | chr5.4:11186915-11186934 | MS.gene010426:intron | 30.0% |
| ! | GTGGTTTTCATTAGTTATCT+TGG | - | chr5.4:11186572-11186591 | None:intergenic | 30.0% |
| ! | TATCAACTTGTTCCATAGTA+TGG | - | chr5.4:11188300-11188319 | None:intergenic | 30.0% |
| ! | TCTGAAATTTGAAATAGGTC+AGG | + | chr5.4:11186914-11186933 | MS.gene010426:intron | 30.0% |
| ! | TGAAATTTGAAATAGGTCAG+GGG | + | chr5.4:11186916-11186935 | MS.gene010426:intron | 30.0% |
| ! | TGAGAACATTTTACGGAATT+TGG | + | chr5.4:11187499-11187518 | MS.gene010426:intron | 30.0% |
| !! | AGTAAACAGTTGATAACTCA+AGG | - | chr5.4:11187688-11187707 | None:intergenic | 30.0% |
| !! | CCAATGCTTTCGTATTTTAA+AGG | - | chr5.4:11186463-11186482 | None:intergenic | 30.0% |
| !! | CCTTTAAAATACGAAAGCAT+TGG | + | chr5.4:11186460-11186479 | MS.gene010426:intron | 30.0% |
| !!! | CAATTCAACTTTTAGAACTG+GGG | - | chr5.4:11188407-11188426 | None:intergenic | 30.0% |
| AAAAATGAAATCTCTGCTGG+TGG | - | chr5.4:11187054-11187073 | None:intergenic | 35.0% | |
| AAAATGAAATCTCTGCTGGT+GGG | - | chr5.4:11187053-11187072 | None:intergenic | 35.0% | |
| AAAGCAATCTGTCCATACTA+TGG | + | chr5.4:11188285-11188304 | MS.gene010426:CDS | 35.0% | |
| AAATAGGTCAGGGGTTATTA+TGG | + | chr5.4:11186925-11186944 | MS.gene010426:intron | 35.0% | |
| AACATTCAAACGTTCTTGTG+TGG | - | chr5.4:11187124-11187143 | None:intergenic | 35.0% | |
| ACCAAAATCATTCTCCTTCA+TGG | - | chr5.4:11186173-11186192 | None:intergenic | 35.0% | |
| AGAGATGTTTCAAAATCCTC+TGG | - | chr5.4:11188449-11188468 | None:intergenic | 35.0% | |
| ATGCGTTGAGTTTGATCTTT+AGG | + | chr5.4:11186321-11186340 | MS.gene010426:intron | 35.0% | |
| CAACTGTTTACTCAAGACAT+AGG | + | chr5.4:11187696-11187715 | MS.gene010426:intron | 35.0% | |
| CACAATTGGTCATCCTAAAT+TGG | - | chr5.4:11188676-11188695 | None:intergenic | 35.0% | |
| CGAGACTAATAACTCAATTG+CGG | + | chr5.4:11188878-11188897 | MS.gene010426:CDS | 35.0% | |
| GACAAAAATGAAATCTCTGC+TGG | - | chr5.4:11187057-11187076 | None:intergenic | 35.0% | |
| GTCCACACATACTACAAATA+TGG | + | chr5.4:11187233-11187252 | MS.gene010426:CDS | 35.0% | |
| GTTTACTCAAGACATAGGAT+AGG | + | chr5.4:11187701-11187720 | MS.gene010426:intron | 35.0% | |
| TTGAAATGTGAAACAGTGTC+CGG | + | chr5.4:11188142-11188161 | MS.gene010426:intron | 35.0% | |
| TTTCCGTATATGCTTGTGTT+TGG | + | chr5.4:11188737-11188756 | MS.gene010426:CDS | 35.0% | |
| ! | CGCAATTGAGTTATTAGTCT+CGG | - | chr5.4:11188880-11188899 | None:intergenic | 35.0% |
| ! | TCAGCAATGTTTCTATCATC+TGG | - | chr5.4:11188518-11188537 | None:intergenic | 35.0% |
| ! | TTTTGCAAGCAATATTGAGC+AGG | + | chr5.4:11187394-11187413 | MS.gene010426:CDS | 35.0% |
| !! | ATCTCAGCGAGAATTGATTT+TGG | - | chr5.4:11189070-11189089 | None:intergenic | 35.0% |
| !! | GACAGATTGCTTTTCAACAA+TGG | - | chr5.4:11188278-11188297 | None:intergenic | 35.0% |
| !! | TCTCAGCGAGAATTGATTTT+GGG | - | chr5.4:11189069-11189088 | None:intergenic | 35.0% |
| ACAACCGAAGAGAAAAGTGA+TGG | + | chr5.4:11189322-11189341 | MS.gene010426:CDS | 40.0% | |
| ACCCTAAACCACGACAAAAA+CGG | + | chr5.4:11186037-11186056 | MS.gene010426:CDS | 40.0% | |
| AGCCTTCTCCAAATAAGCAA+CGG | - | chr5.4:11188787-11188806 | None:intergenic | 40.0% | |
| ATCAACAGAGTTGCCCATTA+TGG | + | chr5.4:11187191-11187210 | MS.gene010426:intron | 40.0% | |
| ATGCACACGTATCAAAGAGA+AGG | - | chr5.4:11187774-11187793 | None:intergenic | 40.0% | |
| ATTGCTTGCAAAAGATGCAG+TGG | - | chr5.4:11187387-11187406 | None:intergenic | 40.0% | |
| CATGAATGGCACTTATTGTG+GGG | + | chr5.4:11187791-11187810 | MS.gene010426:intron | 40.0% | |
| CCTCCAAACACAAGCATATA+CGG | - | chr5.4:11188743-11188762 | None:intergenic | 40.0% | |
| CTCAAGTGAACTGGAAAAGA+AGG | + | chr5.4:11188935-11188954 | MS.gene010426:CDS | 40.0% | |
| CTTTGATACGTGTGCATGAA+TGG | + | chr5.4:11187777-11187796 | MS.gene010426:intron | 40.0% | |
| GAAGGCTACATCTGTTTGTA+AGG | + | chr5.4:11188800-11188819 | MS.gene010426:CDS | 40.0% | |
| GCATGAATGGCACTTATTGT+GGG | + | chr5.4:11187790-11187809 | MS.gene010426:intron | 40.0% | |
| GGATAGTGATACTGAAGAGT+TGG | + | chr5.4:11188189-11188208 | MS.gene010426:CDS | 40.0% | |
| TGCATGAATGGCACTTATTG+TGG | + | chr5.4:11187789-11187808 | MS.gene010426:intron | 40.0% | |
| TGGTTGTGCACTGTTATACA+AGG | + | chr5.4:11187253-11187272 | MS.gene010426:CDS | 40.0% | |
| TGTCAACCTGATGCTCTTAT+AGG | + | chr5.4:11187073-11187092 | MS.gene010426:intron | 40.0% | |
| TTCTCGCCAAACTACAACTT+AGG | - | chr5.4:11188097-11188116 | None:intergenic | 40.0% | |
| TTGAGATCAGGTTCAATTCG+TGG | + | chr5.4:11186221-11186240 | MS.gene010426:intron | 40.0% | |
| ! | ATGTTTTCTGTGCCCTAATC+AGG | + | chr5.4:11187739-11187758 | MS.gene010426:intron | 40.0% |
| ! | GCCATGAAGGAGAATGATTT+TGG | + | chr5.4:11186169-11186188 | MS.gene010426:CDS | 40.0% |
| ! | TCACACATCTTGGTGTAGTA+GGG | + | chr5.4:11189230-11189249 | MS.gene010426:CDS | 40.0% |
| ! | TGCATGTTCGCAGTGTTTTA+TGG | + | chr5.4:11186381-11186400 | MS.gene010426:intron | 40.0% |
| ! | TGTTTTCTGTGCCCTAATCA+GGG | + | chr5.4:11187740-11187759 | MS.gene010426:intron | 40.0% |
| !! | TCCGTTTTTGTCGTGGTTTA+GGG | - | chr5.4:11186041-11186060 | None:intergenic | 40.0% |
| !! | TCTTCGGTTGTTTCTAATGC+TGG | - | chr5.4:11189313-11189332 | None:intergenic | 40.0% |
| !! | TTCCGTTTTTGTCGTGGTTT+AGG | - | chr5.4:11186042-11186061 | None:intergenic | 40.0% |
| !!! | GTTTTGGCTAATTCTGTGCT+AGG | + | chr5.4:11186740-11186759 | MS.gene010426:intron | 40.0% |
| AAACAACCAGGAGTCAGAAG+TGG | + | chr5.4:11187427-11187446 | MS.gene010426:CDS | 45.0% | |
| AAAGGGAAACAAGGCCATGA+AGG | + | chr5.4:11186156-11186175 | MS.gene010426:CDS | 45.0% | |
| AAATAAGCAACGGCTTCCTC+AGG | - | chr5.4:11188777-11188796 | None:intergenic | 45.0% | |
| AACAAAACGTAGGGCCTGTT+TGG | + | chr5.4:11186495-11186514 | MS.gene010426:intron | 45.0% | |
| AACATTGGCAGATGTTGCTC+TGG | + | chr5.4:11188327-11188346 | MS.gene010426:CDS | 45.0% | |
| AAGTTAAGGCTGTCTAGCAG+TGG | - | chr5.4:11188704-11188723 | None:intergenic | 45.0% | |
| ACCGAAGAGAAAAGTGATGG+TGG | + | chr5.4:11189325-11189344 | MS.gene010426:CDS | 45.0% | |
| ACTGTTATACAAGGCTCAGG+AGG | + | chr5.4:11187262-11187281 | MS.gene010426:CDS | 45.0% | |
| AGAACTGGGGTAGAGAGAAT+TGG | - | chr5.4:11188394-11188413 | None:intergenic | 45.0% | |
| AGCCGTTGCTTATTTGGAGA+AGG | + | chr5.4:11188782-11188801 | MS.gene010426:CDS | 45.0% | |
| AGGGCCTGTTTGGATTGTTT+GGG | + | chr5.4:11186505-11186524 | MS.gene010426:intron | 45.0% | |
| AGGTCAGGGGTTATTATGGA+TGG | + | chr5.4:11186929-11186948 | MS.gene010426:intron | 45.0% | |
| ATCTCTCTCTGACTACCAGA+AGG | + | chr5.4:11188463-11188482 | MS.gene010426:CDS | 45.0% | |
| ATCTTCCTGGTCGTTCTTAC+CGG | - | chr5.4:11188164-11188183 | None:intergenic | 45.0% | |
| ATTGGTGTGAGCGGTTGAAA+TGG | - | chr5.4:11189197-11189216 | None:intergenic | 45.0% | |
| ATTTCAACCGCTCACACCAA+TGG | + | chr5.4:11189196-11189215 | MS.gene010426:CDS | 45.0% | |
| CACTATCCTCATCATCTTCC+TGG | - | chr5.4:11188177-11188196 | None:intergenic | 45.0% | |
| CAGGAGTCAGAAGTGGATAA+TGG | + | chr5.4:11187434-11187453 | MS.gene010426:CDS | 45.0% | |
| CATTATCCACTTCTGACTCC+TGG | - | chr5.4:11187436-11187455 | None:intergenic | 45.0% | |
| CCGCGTCAAAACAAAACGTA+GGG | + | chr5.4:11186486-11186505 | MS.gene010426:intron | 45.0% | |
| CCGTATATGCTTGTGTTTGG+AGG | + | chr5.4:11188740-11188759 | MS.gene010426:CDS | 45.0% | |
| CTTCACAGGTCCATCTTTGT+CGG | - | chr5.4:11187342-11187361 | None:intergenic | 45.0% | |
| GACAAAGATGGACCTGTGAA+GGG | + | chr5.4:11187341-11187360 | MS.gene010426:CDS | 45.0% | |
| GATACTGAAGAGTTGGCAGA+AGG | + | chr5.4:11188196-11188215 | MS.gene010426:CDS | 45.0% | |
| GCAGAAATTGAAACTCTCGC+AGG | + | chr5.4:11188909-11188928 | MS.gene010426:CDS | 45.0% | |
| GCTGATGAGCTGATGGAAAA+GGG | + | chr5.4:11186139-11186158 | MS.gene010426:CDS | 45.0% | |
| GCTGATGGAAAAGGGAAACA+AGG | + | chr5.4:11186147-11186166 | MS.gene010426:CDS | 45.0% | |
| GGCTAATTCTGTGCTAGGAA+TGG | + | chr5.4:11186745-11186764 | MS.gene010426:intron | 45.0% | |
| GGGAGCAAGTTCACCATAAT+GGG | - | chr5.4:11187207-11187226 | None:intergenic | 45.0% | |
| GTAGTATGTGTGGACACACT+CGG | - | chr5.4:11187228-11187247 | None:intergenic | 45.0% | |
| GTCTCCCAAACAATCCAAAC+AGG | - | chr5.4:11186512-11186531 | None:intergenic | 45.0% | |
| GTGTCTACTCCCAACAATTC+AGG | - | chr5.4:11187951-11187970 | None:intergenic | 45.0% | |
| TAGGGCCTGTTTGGATTGTT+TGG | + | chr5.4:11186504-11186523 | MS.gene010426:intron | 45.0% | |
| TAGTATGTGTGGACACACTC+GGG | - | chr5.4:11187227-11187246 | None:intergenic | 45.0% | |
| TCTACTCCCAACAATTCAGG+AGG | - | chr5.4:11187948-11187967 | None:intergenic | 45.0% | |
| TCTATCCATCCTAGAACAGC+TGG | + | chr5.4:11188487-11188506 | MS.gene010426:CDS | 45.0% | |
| TGAACCTGATCTCAAGAGCA+CGG | - | chr5.4:11186216-11186235 | None:intergenic | 45.0% | |
| TGAGATTCTAGCATCTGCCA+AGG | + | chr5.4:11189084-11189103 | MS.gene010426:CDS | 45.0% | |
| TGAGGAAGCCGTTGCTTATT+TGG | + | chr5.4:11188776-11188795 | MS.gene010426:CDS | 45.0% | |
| TGCACTGTTATACAAGGCTC+AGG | + | chr5.4:11187259-11187278 | MS.gene010426:CDS | 45.0% | |
| ! | GCATTTTCCATGCCAAATCC+AGG | - | chr5.4:11188240-11188259 | None:intergenic | 45.0% |
| ! | GGAGGTTAGTTCAAAACCTG+AGG | + | chr5.4:11188758-11188777 | MS.gene010426:CDS | 45.0% |
| ! | GTCACACATCTTGGTGTAGT+AGG | + | chr5.4:11189229-11189248 | MS.gene010426:CDS | 45.0% |
| ! | TAGCAGTGGAAGAGCACAAT+TGG | - | chr5.4:11188690-11188709 | None:intergenic | 45.0% |
| !! | ATGGGTCCTATAAGAGCATC+AGG | - | chr5.4:11187082-11187101 | None:intergenic | 45.0% |
| !! | GCCACCATCACTTTTCTCTT+CGG | - | chr5.4:11189329-11189348 | None:intergenic | 45.0% |
| !! | TTCAACCAGCTGTTCTAGGA+TGG | - | chr5.4:11188495-11188514 | None:intergenic | 45.0% |
| !!! | CCCTACGTTTTGTTTTGACG+CGG | - | chr5.4:11186489-11186508 | None:intergenic | 45.0% |
| !!! | CCTACGTTTTGTTTTGACGC+GGG | - | chr5.4:11186488-11186507 | None:intergenic | 45.0% |
| !!! | CTGGGATCTGTTTTTTCCAG+AGG | + | chr5.4:11188430-11188449 | MS.gene010426:intron | 45.0% |
| AAGAGTGAGCTCCTCACAGT+TGG | + | chr5.4:11189135-11189154 | MS.gene010426:CDS | 50.0% | |
| ACGGAAGTCTCAGATGCAGT+TGG | - | chr5.4:11185974-11185993 | None:intergenic | 50.0% | |
| AGACGAGTCTGACCTGGATT+TGG | + | chr5.4:11188225-11188244 | MS.gene010426:CDS | 50.0% | |
| AGCAGATCCATTGGTGTGAG+CGG | - | chr5.4:11189206-11189225 | None:intergenic | 50.0% | |
| AGTCTGACCTGGATTTGGCA+TGG | + | chr5.4:11188230-11188249 | MS.gene010426:CDS | 50.0% | |
| ATAGCCGTGCTCTTGAGATC+AGG | + | chr5.4:11186209-11186228 | MS.gene010426:CDS | 50.0% | |
| ATTCTAGCATCTGCCAAGGC+AGG | + | chr5.4:11189088-11189107 | MS.gene010426:CDS | 50.0% | |
| CCCGCGTCAAAACAAAACGT+AGG | + | chr5.4:11186485-11186504 | MS.gene010426:intron | 50.0% | |
| CGACAAAGATGGACCTGTGA+AGG | + | chr5.4:11187340-11187359 | MS.gene010426:CDS | 50.0% | |
| CGGGAGCAAGTTCACCATAA+TGG | - | chr5.4:11187208-11187227 | None:intergenic | 50.0% | |
| CTAGGATGGATAGAGCCTTC+TGG | - | chr5.4:11188481-11188500 | None:intergenic | 50.0% | |
| CTATAGTGCATGGCCCAGTT+TGG | - | chr5.4:11186703-11186722 | None:intergenic | 50.0% | |
| CTGGTTCAACCAGCTGTTCT+AGG | - | chr5.4:11188499-11188518 | None:intergenic | 50.0% | |
| GAACGACCAGGAAGATGATG+AGG | + | chr5.4:11188168-11188187 | MS.gene010426:CDS | 50.0% | |
| GAGCTCACTCTTGCTAGAGA+TGG | - | chr5.4:11189127-11189146 | None:intergenic | 50.0% | |
| GCATTCATAGCACCCTTCAC+AGG | - | chr5.4:11187356-11187375 | None:intergenic | 50.0% | |
| GGACGTGACTTCAAACAACC+AGG | + | chr5.4:11187415-11187434 | MS.gene010426:CDS | 50.0% | |
| GGCTGATGAGCTGATGGAAA+AGG | + | chr5.4:11186138-11186157 | MS.gene010426:CDS | 50.0% | |
| GTGTGAGCGGTTGAAATGGT+TGG | - | chr5.4:11189193-11189212 | None:intergenic | 50.0% | |
| GTTCTCTGTAGCCAACTGTG+AGG | - | chr5.4:11189149-11189168 | None:intergenic | 50.0% | |
| TCTGCTGGAGTCACACATCT+TGG | + | chr5.4:11189220-11189239 | MS.gene010426:CDS | 50.0% | |
| TGATGAAGACGAGTCTGACC+TGG | + | chr5.4:11188219-11188238 | MS.gene010426:CDS | 50.0% | |
| TGTGACTCCAGCAGATCCAT+TGG | - | chr5.4:11189215-11189234 | None:intergenic | 50.0% | |
| TTCTTGGGAACAGCACCCAA+AGG | - | chr5.4:11187296-11187315 | None:intergenic | 50.0% | |
| TTGGCTACAGAGAACAGCAG+TGG | + | chr5.4:11189154-11189173 | MS.gene010426:CDS | 50.0% | |
| ! | CATCTTGGTGTAGTAGGGAG+AGG | + | chr5.4:11189235-11189254 | MS.gene010426:CDS | 50.0% |
| ! | CATGGGCTTTTTGTACCCCA+CGG | - | chr5.4:11187856-11187875 | None:intergenic | 50.0% |
| !! | GCAGATGTTGCTCTGGAAAG+AGG | + | chr5.4:11188334-11188353 | MS.gene010426:CDS | 50.0% |
| !! | GGTTGGTTGAGGCATTGTGA+CGG | - | chr5.4:11185993-11186012 | None:intergenic | 50.0% |
| AAGCAGGAGGAGTCTCCACA+TGG | + | chr5.4:11187314-11187333 | MS.gene010426:CDS | 55.0% | |
| AATGCTTGCTTCTGCCACGC+TGG | - | chr5.4:11189281-11189300 | None:intergenic | 55.0% | |
| ACTCGAGTCTGTGACGTGTG+CGG | + | chr5.4:11187823-11187842 | MS.gene010426:intron | 55.0% | |
| AGTGTCCGGTAAGAACGACC+AGG | + | chr5.4:11188156-11188175 | MS.gene010426:intron | 55.0% | |
| CAGGAGGAAGCCGATCCTTT+GGG | + | chr5.4:11187278-11187297 | MS.gene010426:CDS | 55.0% | |
| CGCAGGTCTCTCAAGTGAAC+TGG | + | chr5.4:11188926-11188945 | MS.gene010426:CDS | 55.0% | |
| CGGTCAGAAGTCTCTGGACA+TGG | + | chr5.4:11186117-11186136 | MS.gene010426:CDS | 55.0% | |
| CGTGGGGTACAAAAAGCCCA+TGG | + | chr5.4:11187854-11187873 | MS.gene010426:intron | 55.0% | |
| GCGATCATCAAATGCCAGCG+TGG | + | chr5.4:11189264-11189283 | MS.gene010426:CDS | 55.0% | |
| GCTCACACCAATGGATCTGC+TGG | + | chr5.4:11189205-11189224 | MS.gene010426:CDS | 55.0% | |
| GGACATGGCTGATGAGCTGA+TGG | + | chr5.4:11186132-11186151 | MS.gene010426:CDS | 55.0% | |
| GGAGACTCCTCCTGCTTCTT+GGG | - | chr5.4:11187311-11187330 | None:intergenic | 55.0% | |
| GGGAACAGCACCCAAAGGAT+CGG | - | chr5.4:11187291-11187310 | None:intergenic | 55.0% | |
| TCAGGAGGAAGCCGATCCTT+TGG | + | chr5.4:11187277-11187296 | MS.gene010426:CDS | 55.0% | |
| TGCTGTTCCCAAGAAGCAGG+AGG | + | chr5.4:11187301-11187320 | MS.gene010426:CDS | 55.0% | |
| TGGAGACTCCTCCTGCTTCT+TGG | - | chr5.4:11187312-11187331 | None:intergenic | 55.0% | |
| TTCCTTTCCACTGCCTGCCT+TGG | - | chr5.4:11189104-11189123 | None:intergenic | 55.0% | |
| ! | GTGACAGGTTCGGTTGGTTG+AGG | - | chr5.4:11186004-11186023 | None:intergenic | 55.0% |
| ! | GTGGTTTAGGGTTCCGTCGA+CGG | - | chr5.4:11186029-11186048 | None:intergenic | 55.0% |
| !! | CGGTGGTTCCGTTTTTGTCG+TGG | - | chr5.4:11186048-11186067 | None:intergenic | 55.0% |
| CAGAGACTTCTGACCGTCGC+TGG | - | chr5.4:11186113-11186132 | None:intergenic | 60.0% | |
| CAGCGACGGTCAGAAGTCTC+TGG | + | chr5.4:11186111-11186130 | MS.gene010426:CDS | 60.0% | |
| CCATCTTTGTCGGCGCCATG+TGG | - | chr5.4:11187332-11187351 | None:intergenic | 60.0% | |
| GAACCTGTCACAGCCGTCGA+CGG | + | chr5.4:11186013-11186032 | MS.gene010426:CDS | 60.0% | |
| GTCGACGGCTGTGACAGGTT+CGG | - | chr5.4:11186014-11186033 | None:intergenic | 60.0% | |
| TGCCAAGGCAGGCAGTGGAA+AGG | + | chr5.4:11189099-11189118 | MS.gene010426:CDS | 60.0% | |
| ! | ACGGCTGTGACAGGTTCGGT+TGG | - | chr5.4:11186010-11186029 | None:intergenic | 60.0% |
| ! | ACGTGTGCGGACTAAGTCCG+TGG | + | chr5.4:11187836-11187855 | MS.gene010426:intron | 60.0% |
| ! | CGTGTGCGGACTAAGTCCGT+GGG | + | chr5.4:11187837-11187856 | MS.gene010426:intron | 60.0% |
| ! | GGAAGTTGCGGCGGATTCCA+CGG | - | chr5.4:11186080-11186099 | None:intergenic | 60.0% |
| ! | GTGTGCGGACTAAGTCCGTG+GGG | + | chr5.4:11187838-11187857 | MS.gene010426:intron | 60.0% |
| !! | CCACATGGCGCCGACAAAGA+TGG | + | chr5.4:11187329-11187348 | MS.gene010426:CDS | 60.0% |
| !! | GGGTGCTGTTCCCAAGAAGC+AGG | + | chr5.4:11187298-11187317 | MS.gene010426:CDS | 60.0% |
| ATCCGCCGCAACTTCCGCTC+CGG | + | chr5.4:11186084-11186103 | MS.gene010426:CDS | 65.0% | |
| GCATCTGCCAAGGCAGGCAG+TGG | + | chr5.4:11189094-11189113 | MS.gene010426:CDS | 65.0% | |
| GGATTCCACGGCGGGGTTGA+CGG | - | chr5.4:11186068-11186087 | None:intergenic | 65.0% | |
| GTTCCGTCGACGGCTGTGAC+AGG | - | chr5.4:11186019-11186038 | None:intergenic | 65.0% | |
| TTCTGACCGTCGCTGGACGC+CGG | - | chr5.4:11186106-11186125 | None:intergenic | 65.0% | |
| ! | AGTTGCGGCGGATTCCACGG+CGG | - | chr5.4:11186077-11186096 | None:intergenic | 65.0% |
| AACCACCGTCAACCCCGCCG+TGG | + | chr5.4:11186060-11186079 | MS.gene010426:CDS | 70.0% | |
| GGACGCCGGAGCGGAAGTTG+CGG | - | chr5.4:11186092-11186111 | None:intergenic | 70.0% | |
| TTCCACGGCGGGGTTGACGG+TGG | - | chr5.4:11186065-11186084 | None:intergenic | 70.0% | |
| ! | GTTGCGGCGGATTCCACGGC+GGG | - | chr5.4:11186076-11186095 | None:intergenic | 70.0% |
| ! | TTGCGGCGGATTCCACGGCG+GGG | - | chr5.4:11186075-11186094 | None:intergenic | 70.0% |
| ACCGTCGCTGGACGCCGGAG+CGG | - | chr5.4:11186101-11186120 | None:intergenic | 75.0% | |
| CGCCGGAGCGGAAGTTGCGG+CGG | - | chr5.4:11186089-11186108 | None:intergenic | 75.0% | |
| TCCGCTCCGGCGTCCAGCGA+CGG | + | chr5.4:11186097-11186116 | MS.gene010426:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 11185956 | 11189357 | 11185956 | ID=MS.gene010426 |
| chr5.4 | mRNA | 11185956 | 11189357 | 11185956 | ID=MS.gene010426.t1;Parent=MS.gene010426 |
| chr5.4 | exon | 11185956 | 11186230 | 11185956 | ID=MS.gene010426.t1.exon1;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11185956 | 11186230 | 11185956 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| chr5.4 | exon | 11187199 | 11187455 | 11187199 | ID=MS.gene010426.t1.exon2;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11187199 | 11187455 | 11187199 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| chr5.4 | exon | 11188158 | 11188355 | 11188158 | ID=MS.gene010426.t1.exon3;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11188158 | 11188355 | 11188158 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| chr5.4 | exon | 11188450 | 11188540 | 11188450 | ID=MS.gene010426.t1.exon4;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11188450 | 11188540 | 11188450 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| chr5.4 | exon | 11188734 | 11188956 | 11188734 | ID=MS.gene010426.t1.exon5;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11188734 | 11188956 | 11188734 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| chr5.4 | exon | 11189037 | 11189357 | 11189037 | ID=MS.gene010426.t1.exon6;Parent=MS.gene010426.t1 |
| chr5.4 | CDS | 11189037 | 11189357 | 11189037 | ID=cds.MS.gene010426.t1;Parent=MS.gene010426.t1 |
| Gene Sequence |
| Protein sequence |
