AlfalfaGEDB | MS.gene014181

M. sativa cultivar XinJiangDaYe / MS.gene014181

KEGG: K06067
GO: GO:0003674 GO:0003824 GO:0004407 GO:0006325 GO:0006464 GO:0006476 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016569 GO:0016570 GO:0016575 GO:0016787 GO:0016810 GO:0016811 GO:0019213 GO:0019538 GO:0033558 GO:0035601 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0071840 GO:0098732 GO:0140096 GO:1901564
PFAM: PF00850.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014181.t1	XP_013462369.1	98.6	498	7	0	1	498	1	498	9.80E-279	968.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014181.t1	O22446	83.5	486	78	2	1	485	1	485	1.9e-230	799.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014181.t1	A0A072V336	98.6	498	7	0	1	498	1	498	7.1e-279	968.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene014181	MS.gene009155	PPI
MS.gene030666	MS.gene014181	PPI
MS.gene014181	MS.gene060311	PPI
MS.gene08109	MS.gene014181	PPI
MS.gene03199	MS.gene014181	PPI
MS.gene014181	MS.gene09204	PPI
MS.gene27302	MS.gene014181	PPI
MS.gene014181	MS.gene61084	PPI
MS.gene97701	MS.gene014181	PPI
MS.gene014181	MS.gene051698	PPI
MS.gene014181	MS.gene016292	PPI
MS.gene014181	MS.gene91631	PPI
MS.gene014181	MS.gene29637	PPI
MS.gene014181	MS.gene58114	PPI
MS.gene014181	MS.gene000865	PPI
MS.gene014181	MS.gene32685	PPI
MS.gene014181	MS.gene04748	PPI
MS.gene045265	MS.gene014181	PPI
MS.gene014181	MS.gene80202	PPI
MS.gene014181	MS.gene047701	PPI
MS.gene014181	MS.gene05905	PPI
MS.gene014181	MS.gene55174	PPI
MS.gene017622	MS.gene014181	PPI
MS.gene014181	MS.gene64164	PPI
MS.gene067412	MS.gene014181	PPI
MS.gene66051	MS.gene014181	PPI
MS.gene014181	MS.gene057458	PPI
MS.gene014181	MS.gene016544	PPI
MS.gene014181	MS.gene012127	PPI
MS.gene04820	MS.gene014181	PPI
MS.gene014181	MS.gene26406	PPI
MS.gene014181	MS.gene063809	PPI
MS.gene014181	MS.gene009411	PPI
MS.gene014181	MS.gene068179	PPI
MS.gene014181	MS.gene027909	PPI
MS.gene014181	MS.gene014890	PPI
MS.gene014181	MS.gene70261	PPI
MS.gene014181	MS.gene018762	PPI
MS.gene014181	MS.gene97703	PPI
MS.gene014181	MS.gene041167	PPI
MS.gene049111	MS.gene014181	PPI
MS.gene014181	MS.gene030664	PPI
MS.gene70263	MS.gene014181	PPI
MS.gene014181	MS.gene59485	PPI
MS.gene014181	MS.gene47573	PPI
MS.gene58285	MS.gene014181	PPI
MS.gene014181	MS.gene83541	PPI
MS.gene066811	MS.gene014181	PPI
MS.gene014181	MS.gene44230	PPI
MS.gene014181	MS.gene024064	PPI
MS.gene25997	MS.gene014181	PPI
MS.gene014181	MS.gene86409	PPI
MS.gene04418	MS.gene014181	PPI
MS.gene71949	MS.gene014181	PPI
MS.gene014181	MS.gene058374	PPI
MS.gene014181	MS.gene80691	PPI
MS.gene014181	MS.gene26972	PPI
MS.gene014181	MS.gene017431	PPI
MS.gene014181	MS.gene70258	PPI
MS.gene030125	MS.gene014181	PPI
MS.gene014181	MS.gene056335	PPI
MS.gene014181	MS.gene58112	PPI
MS.gene014181	MS.gene46262	PPI
MS.gene014181	MS.gene066925	PPI
MS.gene014181	MS.gene23886	PPI
MS.gene014181	MS.gene23694	PPI
MS.gene014181	MS.gene022334	PPI
MS.gene014181	MS.gene89203	PPI
MS.gene014181	MS.gene24268	PPI
MS.gene013784	MS.gene014181	PPI
MS.gene014181	MS.gene00233	PPI
MS.gene010426	MS.gene014181	PPI
MS.gene78117	MS.gene014181	PPI
MS.gene05640	MS.gene014181	PPI
MS.gene014181	MS.gene068178	PPI
MS.gene21175	MS.gene014181	PPI
MS.gene78840	MS.gene014181	PPI
MS.gene78924	MS.gene014181	PPI
MS.gene71660	MS.gene014181	PPI
MS.gene014181	MS.gene027904	PPI
MS.gene014181	MS.gene59884	PPI
MS.gene76850	MS.gene014181	PPI
MS.gene014181	MS.gene059054	PPI
MS.gene014181	MS.gene88440	PPI
MS.gene014181	MS.gene56214	PPI
MS.gene029611	MS.gene014181	PPI
MS.gene027907	MS.gene014181	PPI
MS.gene014181	MS.gene46303	PPI
MS.gene014181	MS.gene89672	PPI
MS.gene28434	MS.gene014181	PPI
MS.gene014181	MS.gene26084	PPI
MS.gene014181	MS.gene78227	PPI
MS.gene08434	MS.gene014181	PPI
MS.gene58116	MS.gene014181	PPI
MS.gene014181	MS.gene65125	PPI
MS.gene014181	MS.gene061229	PPI
MS.gene014181	MS.gene75598	PPI
MS.gene030661	MS.gene014181	PPI
MS.gene014181	MS.gene067266	PPI
MS.gene014181	MS.gene74499	PPI
MS.gene67460	MS.gene014181	PPI
MS.gene28432	MS.gene014181	PPI
MS.gene014181	MS.gene015760	PPI
MS.gene014181	MS.gene59883	PPI
MS.gene04079	MS.gene014181	PPI
MS.gene09038	MS.gene014181	PPI
MS.gene80820	MS.gene014181	PPI
MS.gene014181	MS.gene066830	PPI
MS.gene014181	MS.gene29445	PPI
MS.gene014181	MS.gene78224	PPI
MS.gene014181	MS.gene038612	PPI
MS.gene021887	MS.gene014181	PPI
MS.gene52605	MS.gene014181	PPI
MS.gene020313	MS.gene014181	PPI
MS.gene014181	MS.gene033505	PPI
MS.gene90689	MS.gene014181	PPI
MS.gene39538	MS.gene014181	PPI
MS.gene68079	MS.gene014181	PPI
MS.gene014181	MS.gene26816	PPI
MS.gene78922	MS.gene014181	PPI
MS.gene071851	MS.gene014181	PPI
MS.gene014181	MS.gene70661	PPI
MS.gene014181	MS.gene70990	PPI
MS.gene014181	MS.gene28438	PPI
MS.gene014181	MS.gene64789	PPI
MS.gene014181	MS.gene02570	PPI
MS.gene014181	MS.gene68598	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014181.t1	MTR_3g118535	98.594	498	7	0	1	498	1	498	0.0	1015
MS.gene014181.t1	MTR_5g004640	84.354	441	67	2	5	445	9	447	0.0	744
MS.gene014181.t1	MTR_3g077160	62.857	455	155	4	5	445	13	467	0.0	608
MS.gene014181.t1	MTR_4g055080	58.495	412	167	2	17	424	4	415	0.0	514
MS.gene014181.t1	MTR_4g055080	58.974	390	156	2	39	424	1	390	3.24e-171	488
MS.gene014181.t1	MTR_3g077120	66.102	177	56	1	5	177	13	189	1.23e-82	254
MS.gene014181.t1	MTR_2g087270	35.165	182	108	3	149	320	154	335	1.02e-25	108
MS.gene014181.t1	MTR_4g109500	26.032	315	208	9	19	319	26	329	8.62e-24	105
MS.gene014181.t1	MTR_4g109500	26.032	315	208	9	19	319	26	329	1.08e-23	105
MS.gene014181.t1	MTR_4g111985	26.115	314	210	12	37	338	257	560	5.32e-22	100
MS.gene014181.t1	MTR_4g111985	26.115	314	210	12	37	338	218	521	8.87e-22	99.0
MS.gene014181.t1	MTR_4g111985	26.855	283	188	11	37	310	218	490	2.18e-19	91.3
MS.gene014181.t1	MTR_1g016440	26.990	289	191	8	37	319	52	326	1.40e-18	87.4
MS.gene014181.t1	MTR_8g093800	27.473	273	165	9	67	318	113	373	1.84e-18	87.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene014181.t1	AT4G38130	81.893	486	86	2	1	485	1	485	0.0	789
MS.gene014181.t1	AT4G38130	84.052	464	73	1	1	464	1	463	0.0	781
MS.gene014181.t1	AT5G63110	68.856	411	124	3	2	409	4	413	0.0	597
MS.gene014181.t1	AT3G44680	57.908	411	171	2	17	426	4	413	0.0	514
MS.gene014181.t1	AT5G35600	55.501	409	171	4	10	411	2	406	1.57e-161	464
MS.gene014181.t1	AT3G44490	44.138	145	80	1	282	426	2	145	1.29e-38	138
MS.gene014181.t1	AT1G08460	27.723	303	185	6	37	320	39	326	3.86e-28	115
MS.gene014181.t1	AT3G44660	39.310	145	71	2	282	426	2	129	6.99e-28	108
MS.gene014181.t1	AT5G61060	29.503	322	201	11	17	319	24	338	1.64e-27	117
MS.gene014181.t1	AT5G61060	29.448	326	200	11	17	319	24	342	2.81e-26	113
MS.gene014181.t1	AT5G61070	27.900	319	210	10	17	319	57	371	1.27e-24	108
MS.gene014181.t1	AT1G08460	27.925	265	160	6	24	274	28	275	1.86e-24	104
MS.gene014181.t1	AT3G18520	26.596	376	223	12	34	381	168	518	6.78e-23	102
MS.gene014181.t1	AT3G18520	26.596	376	223	12	34	381	168	518	9.92e-23	101
MS.gene014181.t1	AT3G18520	28.333	240	162	5	149	378	276	515	2.33e-22	100
MS.gene014181.t1	AT3G18520	31.579	171	112	4	149	314	276	446	9.41e-19	89.4
MS.gene014181.t1	AT4G33470	33.594	128	82	2	149	274	201	327	2.72e-17	84.3
MS.gene014181.t1	AT5G26040	25.597	293	192	10	37	320	93	368	1.05e-15	79.3

Find 124 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCATTACTTTGCCGATTAA+AGG	0.164939	3.1:-93070505	None:intergenic
GAAAATAATCACCAAATTTA+TGG	0.167816	3.1:-93070372	None:intergenic
GATGCTTTAATCTTTCAATT+AGG	0.168446	3.1:+93070593	MS.gene014181:CDS
ATATGATCCTGTTGTGTTTC+AGG	0.173298	3.1:-93067563	None:intergenic
TGCTCCCAGTGTTCAATTTC+AGG	0.211713	3.1:+93071341	MS.gene014181:CDS
ACTGTTTCTTTCCATAAATT+TGG	0.213488	3.1:+93070361	MS.gene014181:CDS
ATGCTTTAATCTTTCAATTA+GGG	0.231751	3.1:+93070594	MS.gene014181:CDS
TCCAGAAGCCTCACACTTCT+TGG	0.274591	3.1:-93067747	None:intergenic
AATGTGATATTGCTGTTAAC+TGG	0.302265	3.1:+93067705	MS.gene014181:CDS
CATGCCCTTCTTGCCCACTA+TGG	0.309164	3.1:+93067437	MS.gene014181:CDS
GCCAAGAAGTGTGAGGCTTC+TGG	0.309292	3.1:+93067746	MS.gene014181:CDS
TATGATCCTGTTGTGTTTCA+GGG	0.318503	3.1:-93067562	None:intergenic
GAAGATTGTCCTGTCTTTGA+TGG	0.327128	3.1:+93067614	MS.gene014181:CDS
GAGCATTGGGATCCAGATTC+TGG	0.330640	3.1:+93072118	MS.gene014181:CDS
CACGAGTATTATGAATATTT+CGG	0.338501	3.1:+93071207	MS.gene014181:CDS
TTTCTCTCTTGACTTTGCTT+TGG	0.363823	3.1:-93072253	None:intergenic
TCAATGTCCATGCCAGAATC+TGG	0.374372	3.1:-93072130	None:intergenic
AGGCCTCCTGATTCTGATCT+TGG	0.377155	3.1:+93071366	MS.gene014181:CDS
TTCACATTATCTTCATCAAC+TGG	0.383240	3.1:-93076599	None:intergenic
GCAAAGTAATGGAAATCTTT+AGG	0.383254	3.1:+93070515	MS.gene014181:CDS
TGTGGTGCAGACTCTTTATC+TGG	0.383462	3.1:+93070559	MS.gene014181:CDS
ACTGGCGACTTGCGTGATAT+TGG	0.384986	3.1:+93070400	MS.gene014181:CDS
TTGTTGTTCAAACCTTTAAT+CGG	0.387133	3.1:+93070493	MS.gene014181:CDS
GCGGATACGATGTGGCTTCA+TGG	0.387603	3.1:-93067408	None:intergenic
CTTCCGTCTTCTGCACCTGA+TGG	0.389623	3.1:+93067317	MS.gene014181:CDS
GAGGTTGGGAATTATTATTA+TGG	0.397863	3.1:+93067374	MS.gene014181:CDS
AGGCAGACGGGAGTTGCTCT+TGG	0.418535	3.1:+93071156	MS.gene014181:intron
AGAGAATATTGTGACTGATT+TGG	0.419588	3.1:+93076628	MS.gene014181:CDS
TTCCGTCTTCTGCACCTGAT+GGG	0.421600	3.1:+93067318	MS.gene014181:CDS
GACTTGCGTGATATTGGATA+TGG	0.432369	3.1:+93070406	MS.gene014181:CDS
ACCTCTCCAAGATCAGAATC+AGG	0.444389	3.1:-93071372	None:intergenic
TCACTTCAGATCCGTCTCTC+TGG	0.446265	3.1:-93076651	None:intergenic
TCTTTCTGTCAAACTTATGC+TGG	0.451415	3.1:+93067644	MS.gene014181:CDS
TCTTTATCTGGAGACAGGTT+GGG	0.453512	3.1:+93070571	MS.gene014181:CDS
GCAACATGAAGGGTATAATC+TGG	0.458383	3.1:-93071231	None:intergenic
AATGTTCCGCTCTTGCTACT+AGG	0.467071	3.1:+93070652	MS.gene014181:CDS
GGGAATTATTATTATGGCCA+AGG	0.467920	3.1:+93067380	MS.gene014181:CDS
TGAAGATAGAGATGAGCATT+GGG	0.469243	3.1:+93072105	MS.gene014181:CDS
CTTTCCTGAAATTGAACACT+GGG	0.475024	3.1:-93071345	None:intergenic
CTCTTTATCTGGAGACAGGT+TGG	0.477261	3.1:+93070570	MS.gene014181:CDS
TATTTCTATGATCCTGAGGT+TGG	0.479248	3.1:+93067359	MS.gene014181:CDS
ATTTCTATGATCCTGAGGTT+GGG	0.481090	3.1:+93067360	MS.gene014181:CDS
TTCTGTCAAACTTATGCTGG+AGG	0.481239	3.1:+93067647	MS.gene014181:CDS
CATAATCATCAGCATGAAAA+CGG	0.481588	3.1:-93067517	None:intergenic
CGTGATATTGGATATGGAAA+GGG	0.488820	3.1:+93070412	MS.gene014181:CDS
TAATAATAATTCCCAACCTC+AGG	0.489340	3.1:-93067371	None:intergenic
CACTGGAGAACAACTGCACC+GGG	0.492326	3.1:-93070538	None:intergenic
GATATTATCAAGTAAATGTC+GGG	0.495895	3.1:-93071280	None:intergenic
TCACGCAAGTCGCCAGTACC+AGG	0.497831	3.1:-93070394	None:intergenic
ACCTTTAATCGGCAAAGTAA+TGG	0.504079	3.1:+93070504	MS.gene014181:CDS
ATGAAGATAGAGATGAGCAT+TGG	0.505454	3.1:+93072104	MS.gene014181:CDS
CAGACTCTTTATCTGGAGAC+AGG	0.508402	3.1:+93070566	MS.gene014181:CDS
CATAACCCCTGAAACACAAC+AGG	0.512836	3.1:+93067556	MS.gene014181:CDS
TCCCTGTCTCTAGCAGGAAA+AGG	0.513158	3.1:-93067488	None:intergenic
GTGGTGGCGGTTACACCATT+CGG	0.513823	3.1:+93070674	MS.gene014181:CDS
TAAGAAGTTCTAAGATTGCA+AGG	0.514247	3.1:-93067793	None:intergenic
TATTCATAATACTCGTGCTC+TGG	0.514478	3.1:-93071201	None:intergenic
TTCGGAATGTTGCTCGGTGT+TGG	0.515145	3.1:+93070692	MS.gene014181:CDS
CAATCCATAGTGGGCAAGAA+GGG	0.516417	3.1:-93067441	None:intergenic
ACTTATGCTGGAGGTTCAGT+TGG	0.516719	3.1:+93067656	MS.gene014181:CDS
CAAAGGTCCCTGTCTCTAGC+AGG	0.518536	3.1:-93067494	None:intergenic
TATGCTGGAGGTTCAGTTGG+TGG	0.521919	3.1:+93067659	MS.gene014181:CDS
CGGATACGATGTGGCTTCAT+GGG	0.525525	3.1:-93067407	None:intergenic
TGTTACTTGGGGCAACATGA+AGG	0.526854	3.1:-93071242	None:intergenic
GTTGTAGCGTGTTCTATATG+TGG	0.527612	3.1:+93070276	MS.gene014181:intron
TAGAGAGCACTCAAGGGTCT+CGG	0.527622	3.1:+93076395	MS.gene014181:CDS
TGAATCTCAGCTCAATGATC+CGG	0.531268	3.1:+93072280	MS.gene014181:CDS
GAGTATAGGCCATCAAAGAC+AGG	0.531330	3.1:-93067623	None:intergenic
GATATTGCTGTTAACTGGGC+TGG	0.533945	3.1:+93067710	MS.gene014181:CDS
GACTGATTTGGCCAGAGAGA+CGG	0.534839	3.1:+93076640	MS.gene014181:CDS
GCAATCCATAGTGGGCAAGA+AGG	0.536235	3.1:-93067442	None:intergenic
AAAGAACTAGAGAGCACTCA+AGG	0.537212	3.1:+93076388	MS.gene014181:CDS
TGCTTTAATCTTTCAATTAG+GGG	0.539074	3.1:+93070595	MS.gene014181:CDS
ACACTGGAGAACAACTGCAC+CGG	0.541503	3.1:-93070539	None:intergenic
CCTTTCCTGAAATTGAACAC+TGG	0.543136	3.1:-93071346	None:intergenic
ACACCATTCGGAATGTTGCT+CGG	0.543584	3.1:+93070686	MS.gene014181:CDS
ATGATCCTGTTGTGTTTCAG+GGG	0.546511	3.1:-93067561	None:intergenic
GCGTGATATTGGATATGGAA+AGG	0.546993	3.1:+93070411	MS.gene014181:CDS
GGATATTATCAAGTAAATGT+CGG	0.550643	3.1:-93071281	None:intergenic
CTCTAGCAGGAAAAGGCTTG+TGG	0.551357	3.1:-93067481	None:intergenic
CTTAATGTTCCACTTGATGA+CGG	0.553928	3.1:+93070448	MS.gene014181:CDS
AAGTTTGACAGAAAGAGTAT+AGG	0.555370	3.1:-93067637	None:intergenic
CCGCTCTTGCTACTAGGTGG+TGG	0.556138	3.1:+93070658	MS.gene014181:CDS
CCAGTGTTCAATTTCAGGAA+AGG	0.561391	3.1:+93071346	MS.gene014181:CDS
CAACTCAAACGCTTTAACGT+TGG	0.566804	3.1:+93067590	MS.gene014181:CDS
TCATCAATGCCGTCATCAAG+TGG	0.566825	3.1:-93070457	None:intergenic
ATTGATATCCACCATGGAGA+TGG	0.567849	3.1:+93070301	MS.gene014181:CDS
TCATGTTGCCCCAAGTAACA+TGG	0.568928	3.1:+93071245	MS.gene014181:CDS
TGGATTGCTTCAGCACATGC+AGG	0.569680	3.1:+93067457	MS.gene014181:CDS
CTTCCTCCACACCATCTCCA+TGG	0.571898	3.1:-93070312	None:intergenic
CTCTTGCTACTAGGTGGTGG+CGG	0.573617	3.1:+93070661	MS.gene014181:CDS
GTTACTTGGGGCAACATGAA+GGG	0.581802	3.1:-93071241	None:intergenic
ATGTGATATTGCTGTTAACT+GGG	0.581883	3.1:+93067706	MS.gene014181:CDS
GATTCTCAAGTAGCTTAGAT+CGG	0.588060	3.1:-93071302	None:intergenic
TCCGTCTTCTGCACCTGATG+GGG	0.590771	3.1:+93067319	MS.gene014181:CDS
ATTGCTGTTAACTGGGCTGG+TGG	0.595034	3.1:+93067713	MS.gene014181:CDS
TGCTCGGTGTTGGTGCTATG+AGG	0.602036	3.1:+93070702	MS.gene014181:CDS
ACCCCATCAGGTGCAGAAGA+CGG	0.603020	3.1:-93067320	None:intergenic
ATGCTATTTCTATGATCCTG+AGG	0.612816	3.1:+93067355	MS.gene014181:CDS
TGTGCTGAAGCAATCCATAG+TGG	0.612825	3.1:-93067451	None:intergenic
GTGCTGAAGCAATCCATAGT+GGG	0.613771	3.1:-93067450	None:intergenic
ATAAAGAGTCTGCACCACAC+TGG	0.616250	3.1:-93070555	None:intergenic
GTAATGGAAATCTTTAGGCC+CGG	0.623225	3.1:+93070520	MS.gene014181:CDS
TCCTGATTCTGATCTTGGAG+AGG	0.628534	3.1:+93071371	MS.gene014181:CDS
GTGGCTTCATGGGATGACCT+TGG	0.639461	3.1:-93067397	None:intergenic
AGAACTTCTTAAACAGCACG+AGG	0.642387	3.1:+93067805	MS.gene014181:CDS
TTGGGATCCAGATTCTGGCA+TGG	0.646557	3.1:+93072123	MS.gene014181:CDS
CAAGAAGGGCATGTGTCATG+CGG	0.648533	3.1:-93067427	None:intergenic
CATCAGCATGAAAACGGCAA+AGG	0.654492	3.1:-93067511	None:intergenic
ACACCGAGCAACATTCCGAA+TGG	0.663792	3.1:-93070689	None:intergenic
AAGAACTAGAGAGCACTCAA+GGG	0.664552	3.1:+93076389	MS.gene014181:CDS
TATCCACCATGGAGATGGTG+TGG	0.668224	3.1:+93070306	MS.gene014181:CDS
CCACCACCTAGTAGCAAGAG+CGG	0.670614	3.1:-93070658	None:intergenic
CCACCATGGAGATGGTGTGG+AGG	0.672038	3.1:+93070309	MS.gene014181:CDS
GTTCCGCTCTTGCTACTAGG+TGG	0.676279	3.1:+93070655	MS.gene014181:CDS
GCATGGACATTGATGTTGAA+CGG	0.679554	3.1:+93072140	MS.gene014181:CDS
GTGGACATTGATATCCACCA+TGG	0.680210	3.1:+93070295	MS.gene014181:CDS
CCTCCACACCATCTCCATGG+TGG	0.680490	3.1:-93070309	None:intergenic
GCTTCACACATGGATGTCAG+TGG	0.682917	3.1:+93067287	None:intergenic
GCATCATGCCAAGAAGTGTG+AGG	0.688961	3.1:+93067739	MS.gene014181:CDS
GGTGCAGTTGTTCTCCAGTG+TGG	0.689736	3.1:+93070541	MS.gene014181:CDS
TGTGTCATGCGGATACGATG+TGG	0.693446	3.1:-93067416	None:intergenic
TCTCCAAGATCAGAATCAGG+AGG	0.695400	3.1:-93071369	None:intergenic
TGTAGTTGAAACAAGCGTGA+AGG	0.725827	3.1:+93076425	MS.gene014181:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	93067296	93076673	93067296	ID=MS.gene014181
chr3.1	mRNA	93067296	93076673	93067296	ID=MS.gene014181.t1;Parent=MS.gene014181
chr3.1	exon	93067296	93067826	93067296	ID=MS.gene014181.t1.exon1;Parent=MS.gene014181.t1
chr3.1	CDS	93067296	93067826	93067296	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93070283	93070723	93070283	ID=MS.gene014181.t1.exon2;Parent=MS.gene014181.t1
chr3.1	CDS	93070283	93070723	93070283	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93071162	93071392	93071162	ID=MS.gene014181.t1.exon3;Parent=MS.gene014181.t1
chr3.1	CDS	93071162	93071392	93071162	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93072091	93072161	93072091	ID=MS.gene014181.t1.exon4;Parent=MS.gene014181.t1
chr3.1	CDS	93072091	93072161	93072091	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93072244	93072301	93072244	ID=MS.gene014181.t1.exon5;Parent=MS.gene014181.t1
chr3.1	CDS	93072244	93072301	93072244	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93076378	93076446	93076378	ID=MS.gene014181.t1.exon6;Parent=MS.gene014181.t1
chr3.1	CDS	93076378	93076446	93076378	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1
chr3.1	exon	93076578	93076673	93076578	ID=MS.gene014181.t1.exon7;Parent=MS.gene014181.t1
chr3.1	CDS	93076578	93076673	93076578	ID=cds.MS.gene014181.t1;Parent=MS.gene014181.t1

Gene Sequence

>MS.gene014181

ATGGATGTCAGTGGCAATTCTCTTCCGTCTTCTGCACCTGATGGGGTAAAGAGAAAAGTATGCTATTTCTATGATCCTGAGGTTGGGAATTATTATTATGGCCAAGGTCATCCCATGAAGCCACATCGTATCCGCATGACACATGCCCTTCTTGCCCACTATGGATTGCTTCAGCACATGCAGGTCCACAAGCCTTTTCCTGCTAGAGACAGGGACCTTTGCCGTTTTCATGCTGATGATTATGTTTCATTTCTTCGAAGCATAACCCCTGAAACACAACAGGATCATATGAGACAACTCAAACGCTTTAACGTTGGTGAAGATTGTCCTGTCTTTGATGGCCTATACTCTTTCTGTCAAACTTATGCTGGAGGTTCAGTTGGTGGTGCTGTCAAGTTGAATCACGATCAATGTGATATTGCTGTTAACTGGGCTGGTGGACTGCATCATGCCAAGAAGTGTGAGGCTTCTGGATTTTGCTATGTTAATGATATAGTCCTTGCAATCTTAGAACTTCTTAAACAGCACGAGGTTTGTCTAGCCGTGGAATTCCCTCTGCTTTAATTTTTCTTCATACTTTAAAGGTATATTTTGTGGAATCGATTGGATTTTTTATATTTCAATTTTCTTTAGAACTGATTTATGGTAAGTACTGAAGTTAATATTTAGGAAGTGTAGCTCAGACTTGCATGCTATATACGAGGATAAAAGAGTATTTCTCTCCTTGATCTTATTTTCTGTTAGATCCTTCTGGAAACTCATTCACAGGGACAACACTAAATTTAATGAAACACGAAAAAAATGTTACTTTTCATCTGTGACGCTTTTGCTGTAAACTCACTCAGTGTCTATTATCAATCAGAACATGAAGCCATAGTCAGTATATTTTACAACACTAATGTTGGTCAGGTTTGCATCCACACATTTCTTTTCTCCTAACAAGGCACTTATGTCTTCCTCAGTACATCTAAATAAAAGTAAGCTTGAGCACACCATTGTCCGTTAACTAGTCAGTTTAGTGTTCAATTTAAAGGAAAATGCTATCTATATTCTATAGTATTTGACAACATGGCACGCTTTCTGGTTTCTAGGAGAATGTTCAGCTGGGTAAAGGTTTTCATAATTTTATCATGCACTTAGAGTCAACTAGCAGTTCTTGTTACATATAAGTTATAACTATAAGTTTGGTTAATTATTTTTCCGTATGTCCTTTCTGATATGTATTCTTTAAATCTCACATAGGGGTTAGGCTGTTCACATCAAGAGTGCTTTACCTATTGATGCTTTGTGCATGACCAGAATAATGTTAGTATTTAGTTGGTTTGGTTTGTACCAATTTGAACTGTTAGAGTTAATCGGCCATTTGTTTCTCAACTCAAATATTTGTACATTAATGTGGTGGTATTTTTCTCCAGTTATACTACAGTTTTCTCTTGTTTGCTCTGGTTTCAACAATAAAATTTTGTTCTCCTAGGATAGTCTTCCATAATATATGTGCTGCAATGATATATTACATAAGTTCTAAGCAATCATGTCAATGGTGGATGGTGCAATATGGTAGCCAGTAAAAAATCTGACATATATCATGTGCGACAGCAATGCGGCTATGAAGGAAGCATGGTGGATAGAGTAAAAATATCACATACACACCAAAAGAACTGCAGAAAAGAATTAAAAAAATGACAATATTAAATAACAATTAAAACTCAATTGATGGAAAATATTTTAAAGTCACATAATCCTATATCATAACCTCATCACCATCAAGGTCAAGACCTCAAATAACAACAAAATGATAAAAACAATACAAACAAAAAGTAAACGAGAACAATGAAAAAACAGAATGAAAAATAGACAGTAAGGCAGAGGCGAAAAAAGGGACTGAAGAAGGATGAACAAAATTAGAGAATGAGATGGATATAGCAGAATCCAGGAGATAAAAAAAACAGAAGCAGGAAGAACAGAGGAGGTCGCCAGAACTGGGTGGTTGCTGTATGCCATAATACAGACAGCCAGTCACTAGAGATAGAAACGATGAACAACGAGATGAATGAGAGTGTAGAGTGCAACAGTGCATTGAAGAGAACTGCTGCAAATGCGATGCTGCAACTTTCTTCTAGGGTTTTCCATCACGGGCCTAACTTTTCATGGCCAGGTTCCGTTTTTTTTTTTTTTTTAATTTTGAATTTATAATATTTTTGGTGGATATTTTTGCCATGGCTGCCATTGCCCATTGGTGCCTGCTGCGCCCAGTGAATGGTGGCTGCTATGGCCCTCCATGAAGAACCCTCCACTCTACGGTGGAAATTACAACACTGGTTCTATGTGTAGGTAGCTGCATGCATTTAAGTTTTGAACTAAATTTACTGCTTTTAAAGAAAACATACTTTGACGGAGAAACGAACGTGAATTTTCCAAACTATTTAGTTTCAATACATGCTTCTGTTGGAATTTAACCATTAAAAGTGCTGCCTCAATTTGGTATCATACTGTTTCAAAAAGAAATAATGGAGAGCCATTTGAATACTACGATTTTGTTTGTGCAATAAGTCACCAACATCTGCGACTGCAGTACTGCCTACTCATATTTAGTAGATATAAAATAATTAGAGGATTGCTGTCTTATCGTGTTAATTATACAATGGAACGTCTAGTTAAGCCTGCTCTTAAAGCAGTAGGTAAAATGAATTGCATAGTTTAGTTTATATGGGACACACAACAAGCCAAAAACCATTTTGAGGTTTGTTATGGATCGAAAAATTCCTCGACTATGGCATAGGTTTTACCGCTTGATGATTATGCTCATATTTGTTTAAAATATTAAGCTGTAGTCCCTGAAATATTCAGAAACAATACGAGGGCATAAACTGTAGAAAGTTTGTTTGGCAGGTGACAGTGACAGTGCTAATGTTTTGAACATCTCAAGTGTGTTTGCATACTGCTGTTTCAGTTCATATTTTAAAATGCTAATGTTACGTTTGTTGTAGCGTGTTCTATATGTGGACATTGATATCCACCATGGAGATGGTGTGGAGGAAGCTTTCTACACTACTGATAGAGTCATGACTGTTTCTTTCCATAAATTTGGTGATTATTTTCCTGGTACTGGCGACTTGCGTGATATTGGATATGGAAAGGGAAAATACTACTCTCTTAATGTTCCACTTGATGACGGCATTGATGATGAGAGTTATCATTTGTTGTTCAAACCTTTAATCGGCAAAGTAATGGAAATCTTTAGGCCCGGTGCAGTTGTTCTCCAGTGTGGTGCAGACTCTTTATCTGGAGACAGGTTGGGATGCTTTAATCTTTCAATTAGGGGTCATGCAGAGTGTGTCAGATACATGAGATCATTCAATGTTCCGCTCTTGCTACTAGGTGGTGGCGGTTACACCATTCGGAATGTTGCTCGGTGTTGGTGCTATGAGGTAAAACATTGTTTTTCCTTTATTTGATGTAATATCACTAATATAAGGTAGCTTGATTTTATTTATAAGGCAACCAGAGACCTCTGTCAGAGTGCCAAAACATCTAGTTGAATTATAATATTGAAATTTCAATATTTTCTACATATTTCATGTTAATTATAAAAAATGCTAAACATGAACTAATTCATTATGTAAAACAAGCGATGGTGTTCAAGAAGTCTAAGCAGCTGTGTATTGTTTCCTTATACTAGTCTCGAACTATAAAATATAAATTGAGATATTATTAAAGCCTCTCAGAATGCAATGTGACATTTCATGTAATTATTTCTCATATCTCAGTTTGTTCAGTGTTTTAATATTTATTTACAATTTTAGTCAATCTTCTGTCTAGACTTTCATCCAAGTACATAAAATTTTATTGGCTATTTGTTAAGGCAGACGGGAGTTGCTCTTGGAATAGAAGTTGATGACAAAATGCCAGAGCACGAGTATTATGAATATTTCGGTCCAGATTATACCCTTCATGTTGCCCCAAGTAACATGGAAAACAAAAATACCCGACATTTACTTGATAATATCCGATCTAAGCTACTTGAGAATCTTTCGAAGCTGCAACATGCTCCCAGTGTTCAATTTCAGGAAAGGCCTCCTGATTCTGATCTTGGAGAGGTAAATTATTTAACTAAATTTTTCCCCGTTATCTTTATTTCACGCATGTTTGTTTTCAGCAGAAGATAAGAGCCTATTTTGTGCAAATACTTTCTGTTCTTGTTTGCTTTGTTTCCTGTTTACAAAATAACTTCTGTTTTCGTTGACTTTTATACAAGTATTTGAAAACAGGAAACCAAGTAATACAAGTGAAATTAAGAAATAAAACAGAATATGTTTGCAAAGCAAACTAACCCTATAAAATTATTTTTGAACACACTGATGCATAAGGTACCCACTACCCACATATAGGGATTCAAAAAAGAATTTTAATTTTAACTGTATTATCCCATGCAAAAGGAGCAACTTGAATACTTCACAGGAAAAAAGCATTTCTAACCAGATCCATGACTCCTTCAGAGAATAATTCTGTGTCAATAGTCCTATACTCAGGTGCAATGCGATTAACAGCTCTTCTCTTACCTTCCTTACTCTTAAATTCCCCTCCTTAATAGAATACCCCACTTCTTCTACTACACTACTGGACACATCATTAACTATCCTTTGGCCCCACCTTCTTCATCCTAGAATATATGATAGGAGCCAAAATTAAATAGAAGAACTGAATGGTATTTATACTGACTTTTCCCTAACTTGTCCTAGCTATTTTTGACTCTCTTCATCCTGTTTGAACTCATTCCCTATTCACAATTCTCCAGGAATTTGACGATCATGAAGATAGAGATGAGCATTGGGATCCAGATTCTGGCATGGACATTGATGTTGAACGGTATTTCACTTTATAACTGTATACTAAATTTACTTATCATCAAGTATCACATGATCAGTGTGTCCTTTACCTCATTTATCAGCGATATTCTCCAAAGCAAAGTCAAGAGAGAAATTGTTGAATCTCAGCTCAATGATCCGGTGTGTGTATTTATCTTTTGAAGTATTTAATTTAAATATATTAATTTCTTGTGGAGAATCTAATATTTGTAGAACATATGACGTGTGTTGTTAGGAATTGTATCTAAACCTACATGCATTTACAACATTTTCCGACAAATATCTAGAATTAAATTTGATATACTCTTAGTTACTTTAATGTGGCAACCATAGTATTTACCTGTTAACAAATCAACAGTCCATTCCTTTGTCAGTGCACTGTTCAAAACCCCACGTACTTTTTTTACAGTTCTCAGTCCCCATTTAATTTTGTTCATTTTTAATCTTGTACAACCTACTGTTAGAGAGAAGGGAAAGGGGAAAACCTTGTCAGTCGAGAGAAGAAATTCTTTTACCCTTTAAGCCTTAGCAAATATGCATTAACTATTAATTTTCGAGTGGATTTAAAAGCCACAAAATACTGGCTATTTCTTAAAGAAAATAGAAATGATTAGTTTATCTCCAAAGAAGTTTGGGAATTTGTCATATACCTGCATGTGGGATCGAGTCTATGGGGAAAGTAAGAAGCAAGACTTGTCGTTGACTAACCTAAGTTTTCTCAAAATGATTTCATTCTTGTTTATTCCAATTCCAATAGCAGCTTGTCTTTTTAGAGGTTACAGATAATAAAGAGAATCCTAACCAAACTCTACCACCAATAAGGATTATGTTTTGCAAAACTACATTTAAGGCTTCTTATTTTAAAAAGATTAAATAGTTCAAATCTTTTTTATCCATATGATTGCTCTCCTCTTCGATCTTGAGCTTGTCCTTAAGCTTAAACTTTGGATAAGCTTCTTAGAAATGTGTTAGACAACCTTCTGAACCACTTCTGTCATCAGAAACCTCCTCTAGTGTCATCGATTCAAAAAGTGTGTCAAGACCAAGCTCAAATATGGGAAACACTAACGTTGGATCTTTGCACGTGCGAACTCTAGCAAATCGCCTTTTGTCAATGAAAGACAACCCCAAACAGGGGAGGAGCTACACTATGTTGAGGGTGTTCAAGTGAACCCCCTGAACCGGAAAAAAAAACCTGTAAATCCAATATATTTTTACTTTTTGAACCGCTCAAATATTGTTCTTGCACCTTAACTCAAAGAACCCAAGAGAAGAAACAACACGGGAGATGGTAAATAGAGGATATGCAGGCAATGCAAAAATACCATTGCGTAGATGCAAGCATGAAAAAGGAAGTGTGAGCGGCGGCCAGTTAACAAGAAGACTATTTAGGGTTTTCTATAGTCCACTTTGGGCTTTTCACTATGTGGCCTATTTCTTTTTTACCAAAATGTGGCCCGCGTGTTATATTAGAGTATCTGATAGTTAAGCTTAGTCTAGTTTGTTTTATATCTAAGCTTAGCATAAGCCAGCTGTACACACAGCTGGCATCTCTTATTCATTGTAACTGGCAAGTGTAAGGAATCTTACACTTGACCTGCTATTGCAGGTTTCCTCAATCCATCTATAAAAGATGGAATGTAACAGAAATATTTCATTCAATGAAAAATCAGAATTCAGTTCAAAAGTTAGTTAGATCTATTAGATATTTCTCTCTCTACTCTACCAGATTTTATATGTTATGTCTAGTTGTGTTTCTTTTATTTAACCGAAGAAAACAATGCGTGTTGTCCCCGTGAGCATAGCTCAATTGGTAGGGACAATGCATAATATATGTTAGGGCTGGGGTTCAAACCTCATACACCCATGAGCTCCAGCCACTAGGCTACTTAACCAAAAAAATAAATAATGTGTGTTTAATGGCATTTAAAAAACATATAAAAAGATAAAATATTGCCGGATAAGGCAGAAATTGTTAAACTAATTGATTGAATCATTTAGACTTATAAAAGAATGATTTATTTAGTCTTCACAATATATATTTTTGGCTTAATTGCACGTTTGATCCCTTATGTTTATTTTAGTTTTTAAGTTGGTCCCTTATGTTTTAAAAATTTCAAGTTGGTCCCTTATGTTTGAAAAGTTTCAAGTTGGTCCAAAACGTTACTCACATTGGAATAAGTTAGTCCATTCCACGACATGATATTGAGTTTAATAAAACAAAAAAAAAATTAAAAAAATGTTTTAAAACTGATTTTCTAAATAAGTTAAGTTCCATCACCCATATTGTCAACCCATATCTTTAAACGTTAAGTGATTGAAGGGACTAACTTATTCCAACGTGAGTAATGTTTTGGACCAACTTGAAACTCTTAAAACATAAGGGACCAACTTGAAACTTTTAAAACATAAGGGACCAACTTGAAAACTAAAATAAACATAAGGGATCAAACATGCAATTAAGCCTATATTTTTTATATTCGGTTTCACTGCTATAAACTATTAAATTTGTAAAGATTATATATGTAATTTTTTTTTTTGCACACATACATGTAGGGATGATAATGAGTATCTATGGGTAAAATAATATGATATTTGTGCTCTTTCCGTTGAATAAATCTAACTCGTGTTTACTCCATATCCTTGTGATTATCCGTTAAAAGGATAATCAACAAATTTAGAGGTACGAGATTATGAACATTCTAATTTCATTGTTGTTTTTGTTGTCGTAGGAGATTATGAATAATTTCTTCATGAGAAAAATATCGTAGTATGAGCATGAATTTATTTATCAACATCATATTCATGAAATTATTGGTGTTTTTTTTTTTTTTTTTTGAAAAAAAAAAATTTGAACCCCCTAGGCCAGGGTCCTGGCTACGCCAATGGCTCCAAACCATCATCTAGTTGAATGAAAAGTTTGCAAGGCCATTTGTCCTCATCCCTTACATTTTACAGCAGACATAACTGCTTAAGTTAGATCACCATGAAGGAAAAACCATTTTAAACACCCAACTAGTGAAGAGGTCAATCATAGATATCTGTCATAGACAAAAATAGGCTAATAGGACATTTTAGTCACGAGAGACTCTACCATCAGAAACCAAACACCCTAGAATATTATTTGGCCACCATTTTAGCCTTGAGACGACCCAGGTTAGCATTAGGTCGACCCTGATGGTAAAGATCCACCAATAACTTGAATGGAGAAAATGTACAAGGTTCCAAGTACCGCTCTTCTGAAGAGCACACATTTCATCAACCTATCACTTGTTTCCAATCATAGTTCGAGAAGGCATCATCTGCAATATTAGGGATAGCCATAAAAGATCATGAAGACAAACAAAATGTCATAATAACTAAAAGTAACAGTGAGTAGAAGGGTTATAAGCAGGCACATTATACCTTTATGAATGGGAAGATTAGAGTTAGAGGTAGAGCCAAAACAAATGGAGAAGTAAGCATCTGCAATAACCTCATGGGCAGAAGGAGTAAGTCTAGGCTGCGGTGTTGGCAAGAAAAACACTCACGATGATAGACTTGCGAAGGACGAAAATAGAATTATCTTGAACACGAGGCAGACATGAATGGACTCAGAGCGAACAGGCTAAAGGAATTCCGATAGATTTGGGAGTGGGGAAATGCAACATGCTTAAATAAGGTAGCATAAACTTACACCCGGTAACTGTAGAGACTAAGAGACTAGTAGTGATAACCCTATTGGGGCTGGGTGTTCCAACATCTATGGAATTAAAAGACTAAATCATTTTTAGTCTGTCCCTCAATTGTTCCAATATATCTAAACCTTTGATCATTGGTTGACGTTAACAAGCTTCACATGTAGAGTTAGTGATATAGTTCAAATACACTGATAAAATTGTATTTAGTGTGTTGCTGCCTATCAAGGAATAGGAATGAAGATGGAGGAAAATCTCAACAAAGGCTGAGATTCCCATGTATCACACTTTGTATTATTTGAGAACTGTTTAGAGTCCAAAGACACAACTATAGAGGCTCTGGCAGCAGCTGATGAGTGATTCTTCTTTTTTTTTTTTGAGCAAAGATGAGTAATTCCTCTATGAATGAATTGCATTGTTGTGCAATCCTCAGGCAGCTAATATATTTTATGCCTCTGTTGAAAATTATTTATATTAATTTACAAACAAACTCATGGTATGGAAAATTATACAATTTGTAATGCTGGCTTATCATGCCAGGAGGACCTGAAAAGAACTAGAGAGCACTCAAGGGTCTCGGATACTGCTGTAGTTGAAACAAGCGTGAAGGTGAGTTTCATAATTTCATAAAAAGTACAGATGCATAAAAATTAAATGTATGCATGCATAAGTATCAGTGCATTTTATTGAAAATATGTGGTTGCTATAAAACTTCTACTTATTGAATTTGGTTCTTGCAGGCTTTAGATATTTGTTCTCAGCCAGTTGATGAAGATAATGTGAAAGATGAAGAGAATATTGTGACTGATTTGGCCAGAGAGACGGATCTGAAGTGA

Protein sequence

>MS.gene014181.t1

MDVSGNSLPSSAPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLCRFHADDYVSFLRSITPETQQDHMRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLNHDQCDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDLRDIGYGKGKYYSLNVPLDDGIDDESYHLLFKPLIGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGIEVDDKMPEHEYYEYFGPDYTLHVAPSNMENKNTRHLLDNIRSKLLENLSKLQHAPSVQFQERPPDSDLGEEFDDHEDRDEHWDPDSGMDIDVERDILQSKVKREIVESQLNDPEDLKRTREHSRVSDTAVVETSVKALDICSQPVDEDNVKDEENIVTDLARETDLK