Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011568.t1 | XP_003608656.1 | 98.7 | 235 | 3 | 0 | 1 | 235 | 1 | 235 | 9.80E-128 | 466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011568.t1 | Q8GWE1 | 73.5 | 234 | 59 | 2 | 1 | 231 | 1 | 234 | 4.6e-94 | 345.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011568.t1 | G7JHN2 | 98.7 | 235 | 3 | 0 | 1 | 235 | 1 | 235 | 7.1e-128 | 466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011568 | MS.gene045436 | PPI |
| MS.gene070761 | MS.gene011568 | PPI |
| MS.gene070760 | MS.gene011568 | PPI |
| MS.gene006731 | MS.gene011568 | PPI |
| MS.gene011568 | MS.gene070758 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011568.t1 | MTR_4g100360 | 98.723 | 235 | 3 | 0 | 1 | 235 | 1 | 235 | 2.10e-177 | 486 |
| MS.gene011568.t1 | MTR_1g078300 | 27.542 | 236 | 149 | 7 | 12 | 235 | 3 | 228 | 1.86e-18 | 83.2 |
| MS.gene011568.t1 | MTR_1g078300 | 27.650 | 217 | 137 | 6 | 31 | 235 | 1 | 209 | 8.68e-16 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011568.t1 | AT4G17510 | 73.504 | 234 | 59 | 2 | 1 | 231 | 1 | 234 | 1.17e-128 | 363 |
| MS.gene011568.t1 | AT5G16310 | 27.160 | 243 | 147 | 7 | 12 | 235 | 3 | 234 | 3.76e-18 | 82.4 |
| MS.gene011568.t1 | AT1G65650 | 27.966 | 236 | 148 | 7 | 12 | 235 | 3 | 228 | 5.56e-18 | 81.6 |
Find 50 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAGTTGCAGTTCCTTTC+TGG | 0.062664 | 8.4:-23450015 | MS.gene011568:intron |
| TTGCAGTTCCTTTCTGGTCT+TGG | 0.252161 | 8.4:-23450009 | MS.gene011568:intron |
| TGGATTAGATGATGAGCTTT+TGG | 0.291265 | 8.4:-23449950 | MS.gene011568:CDS |
| CTTCAAATCCACTGCAAACT+TGG | 0.297842 | 8.4:-23449145 | MS.gene011568:CDS |
| AAATCCAGTGATGGATATTA+AGG | 0.333908 | 8.4:-23446463 | None:intergenic |
| CTTCCAAATCTTCCAAAAGA+TGG | 0.341663 | 8.4:-23451238 | MS.gene011568:CDS |
| ATAACTTCTGAAATCAAGTT+TGG | 0.345654 | 8.4:-23449473 | MS.gene011568:intron |
| GAGGATGGACCATGGGATAT+TGG | 0.371748 | 8.4:+23446819 | None:intergenic |
| ACATTGAAGTTCAGAGAATC+TGG | 0.378322 | 8.4:+23446502 | None:intergenic |
| TTCAAGAGGAAGCCATCTTT+TGG | 0.380122 | 8.4:+23451226 | None:intergenic |
| GGTAATGCTTGTGGTACAAT+AGG | 0.400280 | 8.4:-23449518 | MS.gene011568:CDS |
| CTCACCAAGTACTTTGTTGA+AGG | 0.411668 | 8.4:-23446799 | MS.gene011568:intron |
| GAAACCTGGTTCATGACATC+AGG | 0.416814 | 8.4:+23451197 | None:intergenic |
| ATCTGCTATGCTTGTGTGGA+TGG | 0.429690 | 8.4:-23447299 | MS.gene011568:intron |
| ATAGGGCTTCTTCATGCTCT+TGG | 0.430200 | 8.4:-23449500 | MS.gene011568:CDS |
| GGTGAACTTTATGAGCTTGA+TGG | 0.437774 | 8.4:-23446855 | MS.gene011568:CDS |
| AGCACGGCAAGAACAGGCTT+TGG | 0.440185 | 8.4:+23449919 | None:intergenic |
| GATCCTTCTGAATCATGCTC+TGG | 0.458662 | 8.4:+23446524 | None:intergenic |
| TAGGAACACGTAACCTGCAT+TGG | 0.466809 | 8.4:+23449120 | None:intergenic |
| TTTACCTTCAACAAAGTACT+TGG | 0.470505 | 8.4:+23446795 | None:intergenic |
| CATTCTGTAGCAGCCACTGC+TGG | 0.488876 | 8.4:-23448945 | MS.gene011568:CDS |
| CATTGGGTCCAAGTTTGCAG+TGG | 0.496798 | 8.4:+23449137 | None:intergenic |
| CTTCTGAATCATGCTCTGGA+TGG | 0.507581 | 8.4:+23446528 | None:intergenic |
| AACAAAGTACTTGGTGAGGA+TGG | 0.517479 | 8.4:+23446804 | None:intergenic |
| AGGAACACGTAACCTGCATT+GGG | 0.535845 | 8.4:+23449121 | None:intergenic |
| GCAGAGTGCCATGATGTGTA+TGG | 0.538795 | 8.4:-23449970 | MS.gene011568:CDS |
| TTTCATCTGCTATGCTTGTG+TGG | 0.539159 | 8.4:-23447303 | MS.gene011568:CDS |
| CATCTAATCCATACACATCA+TGG | 0.542114 | 8.4:+23449962 | None:intergenic |
| TCTATATCCCCTTACCGCCA+AGG | 0.546014 | 8.4:-23449893 | MS.gene011568:intron |
| TGCAAACTTGGACCCAATGC+AGG | 0.547754 | 8.4:-23449133 | MS.gene011568:intron |
| GTAATGCTTGTGGTACAATA+GGG | 0.556679 | 8.4:-23449517 | MS.gene011568:CDS |
| AAAATAACCTTGGCGGTAAG+GGG | 0.563148 | 8.4:+23449886 | None:intergenic |
| ACTGCCTTAATATCCATCAC+TGG | 0.567942 | 8.4:+23446459 | None:intergenic |
| CTTGAAGACCAAGACCAGAA+AGG | 0.586317 | 8.4:+23450001 | None:intergenic |
| GTTATCAGTCTGAAGAAGAG+AGG | 0.587141 | 8.4:-23449761 | MS.gene011568:intron |
| TGAGCTTGATGGAAGAAAGT+CGG | 0.593082 | 8.4:-23446844 | MS.gene011568:CDS |
| TACCTCTGTATCACCAGCAG+TGG | 0.593658 | 8.4:+23448932 | None:intergenic |
| CGAGAATGACACAGAGATGG+AGG | 0.595559 | 8.4:-23448973 | MS.gene011568:CDS |
| CATCCAGAGCATGATTCAGA+AGG | 0.605086 | 8.4:-23446527 | MS.gene011568:CDS |
| TCTCGAGAATGACACAGAGA+TGG | 0.611926 | 8.4:-23448976 | MS.gene011568:CDS |
| ACTTGGTGAGGATGGACCAT+GGG | 0.613963 | 8.4:+23446812 | None:intergenic |
| TAACCCTGATGTCATGAACC+AGG | 0.619777 | 8.4:-23451201 | MS.gene011568:intron |
| CTTCAACAAAGTACTTGGTG+AGG | 0.623693 | 8.4:+23446800 | None:intergenic |
| ACATCAGGGTTAGCTTCAAG+AGG | 0.625728 | 8.4:+23451212 | None:intergenic |
| ATATCAAAGAAATCCAGTGA+TGG | 0.629924 | 8.4:-23446472 | MS.gene011568:CDS |
| AAACCTGGTTCATGACATCA+GGG | 0.636237 | 8.4:+23451198 | None:intergenic |
| TACTTGGTGAGGATGGACCA+TGG | 0.642074 | 8.4:+23446811 | None:intergenic |
| AAGTCGGCACCAATATCCCA+TGG | 0.660482 | 8.4:-23446828 | MS.gene011568:CDS |
| AGCCACTGCTGGTGATACAG+AGG | 0.668163 | 8.4:-23448934 | MS.gene011568:intron |
| CAAACTGTGGGTAATGCTTG+TGG | 0.677257 | 8.4:-23449527 | MS.gene011568:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTAAAAAAAACTATAAA+CGG | + | chr8.4:23447915-23447934 | None:intergenic | 10.0% |
| !! | TATGTTAATAATTATATGTA+TGG | + | chr8.4:23446606-23446625 | None:intergenic | 10.0% |
| !!! | TATATATTTAAATTTTCTGT+AGG | - | chr8.4:23451153-23451172 | MS.gene011568:intron | 10.0% |
| !!! | TTTATTTTTTCCAAAAAAAT+TGG | - | chr8.4:23449898-23449917 | MS.gene011568:CDS | 10.0% |
| !!! | TTTTTTTAATCTGATTTTAT+GGG | - | chr8.4:23447923-23447942 | MS.gene011568:intron | 10.0% |
| !!! | TTTTTTTTAATCTGATTTTA+TGG | - | chr8.4:23447922-23447941 | MS.gene011568:intron | 10.0% |
| !! | GTAAATATCTTAAAATGTTA+AGG | - | chr8.4:23450939-23450958 | MS.gene011568:intron | 15.0% |
| !! | TAGATATAACTAATGATAAA+AGG | - | chr8.4:23448880-23448899 | MS.gene011568:intron | 15.0% |
| !! | TAGCATATTTCATATATAAT+TGG | - | chr8.4:23448085-23448104 | MS.gene011568:intron | 15.0% |
| !! | TTTATATGAAAAAATAACCT+TGG | + | chr8.4:23447843-23447862 | None:intergenic | 15.0% |
| !!! | AATTACATATCATTTAGTTT+AGG | - | chr8.4:23448312-23448331 | MS.gene011568:intron | 15.0% |
| !!! | CAAAACATTTTATTTTGAAA+AGG | - | chr8.4:23447167-23447186 | MS.gene011568:intron | 15.0% |
| !!! | CTTTATTTTTGTTTTCATTT+TGG | + | chr8.4:23450303-23450322 | None:intergenic | 15.0% |
| !!! | GTATTAAAAAAGTATCAAAT+TGG | - | chr8.4:23446783-23446802 | MS.gene011568:intron | 15.0% |
| !! | AAAGACATGTGTTTAATAAA+AGG | - | chr8.4:23450982-23451001 | MS.gene011568:intron | 20.0% |
| !! | AAGTTCAAATTTAGTCTAAA+GGG | + | chr8.4:23449142-23449161 | None:intergenic | 20.0% |
| !! | AATAAACAAATACACAGATA+AGG | + | chr8.4:23447882-23447901 | None:intergenic | 20.0% |
| !! | ACATAAACTACATTCTATAA+AGG | + | chr8.4:23449066-23449085 | None:intergenic | 20.0% |
| !! | AGAATGTAGTTTATGTTTAT+AGG | - | chr8.4:23449070-23449089 | MS.gene011568:intron | 20.0% |
| !! | ATATAAGAAAGAAATAGAGA+AGG | + | chr8.4:23448628-23448647 | None:intergenic | 20.0% |
| !! | CAAAAAAAAAATGAGGTAAT+TGG | + | chr8.4:23448283-23448302 | None:intergenic | 20.0% |
| !! | GTTACATACAATAAAATTTG+AGG | + | chr8.4:23449167-23449186 | None:intergenic | 20.0% |
| !! | TAAGTTCAAATTTAGTCTAA+AGG | + | chr8.4:23449143-23449162 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGATATAG+CGG | - | chr8.4:23448419-23448438 | MS.gene011568:intron | 20.0% |
| !!! | ACATTTTATTTTGAAAAGGA+AGG | - | chr8.4:23447171-23447190 | MS.gene011568:intron | 20.0% |
| !!! | ATTTTTGTTTTCATTTTGGT+TGG | + | chr8.4:23450299-23450318 | None:intergenic | 20.0% |
| !!! | CAATTTTTAAGATTAGAACA+GGG | + | chr8.4:23446756-23446775 | None:intergenic | 20.0% |
| !!! | CTCAAATAATTACTTTGAAA+TGG | - | chr8.4:23449663-23449682 | MS.gene011568:intron | 20.0% |
| !!! | TGCTAACTTCTATTTTTTAA+TGG | + | chr8.4:23447604-23447623 | None:intergenic | 20.0% |
| !!! | TGGTTTCTATTTTATGTTAA+CGG | - | chr8.4:23447093-23447112 | MS.gene011568:intron | 20.0% |
| !!! | TTGACTAAATTTAACTTTTG+AGG | - | chr8.4:23448814-23448833 | MS.gene011568:intron | 20.0% |
| !!! | TTGATACTTTTTTAATACCA+GGG | + | chr8.4:23446781-23446800 | None:intergenic | 20.0% |
| !!! | TTTGATACTTTTTTAATACC+AGG | + | chr8.4:23446782-23446801 | None:intergenic | 20.0% |
| !!! | TTTTTTCCAAAAAAATTGGT+TGG | - | chr8.4:23449902-23449921 | MS.gene011568:CDS | 20.0% |
| ! | AAAACTTTCCTACAGAATTA+TGG | + | chr8.4:23451113-23451132 | None:intergenic | 25.0% |
| ! | AAGAGAAATTGAATACTTGT+TGG | - | chr8.4:23449981-23450000 | MS.gene011568:CDS | 25.0% |
| ! | AATGAAGAAGATTGAAATGA+AGG | + | chr8.4:23446558-23446577 | None:intergenic | 25.0% |
| ! | ACAGAAAAGAAAACAACTAT+AGG | + | chr8.4:23447684-23447703 | None:intergenic | 25.0% |
| ! | AGCCTATATCAAAACAAATT+TGG | - | chr8.4:23450577-23450596 | MS.gene011568:intron | 25.0% |
| ! | ATACATGAAAATCCTATTCA+AGG | + | chr8.4:23448126-23448145 | None:intergenic | 25.0% |
| ! | ATAGAGCTAAACAATATATC+AGG | - | chr8.4:23450492-23450511 | MS.gene011568:intron | 25.0% |
| ! | ATATGAAAAAATAACCTTGG+CGG | + | chr8.4:23447840-23447859 | None:intergenic | 25.0% |
| ! | ATTGAAATGAAGGATGAAAA+GGG | + | chr8.4:23446548-23446567 | None:intergenic | 25.0% |
| ! | ATTTCTCTTTGATAAAGTTG+AGG | + | chr8.4:23449970-23449989 | None:intergenic | 25.0% |
| ! | CAAAGTAATTATTTGAGTCT+CGG | + | chr8.4:23449660-23449679 | None:intergenic | 25.0% |
| ! | CAGAAAAGAAAACAACTATA+GGG | + | chr8.4:23447683-23447702 | None:intergenic | 25.0% |
| ! | CCTGTTCTAATCTTAAAAAT+TGG | - | chr8.4:23446754-23446773 | MS.gene011568:intron | 25.0% |
| ! | GAAATTAATCAGACAAACAT+AGG | + | chr8.4:23450818-23450837 | None:intergenic | 25.0% |
| ! | GATATACAGAAAACATAATC+AGG | - | chr8.4:23446926-23446945 | MS.gene011568:intron | 25.0% |
| ! | GCAACAGAATAATGAAAAAA+GGG | - | chr8.4:23447980-23447999 | MS.gene011568:intron | 25.0% |
| ! | TACATGAAAATCCTATTCAA+GGG | + | chr8.4:23448125-23448144 | None:intergenic | 25.0% |
| ! | TCAGGACATATCAATTTAAA+AGG | - | chr8.4:23446944-23446963 | MS.gene011568:intron | 25.0% |
| ! | TGATGCACAAAAAAAAAATG+AGG | + | chr8.4:23448290-23448309 | None:intergenic | 25.0% |
| ! | TGCAACAGAATAATGAAAAA+AGG | - | chr8.4:23447979-23447998 | MS.gene011568:intron | 25.0% |
| ! | TTAATCACAGGAAAAATTAG+AGG | + | chr8.4:23449609-23449628 | None:intergenic | 25.0% |
| ! | TTATTAAACACATGTCTTTC+AGG | + | chr8.4:23450981-23451000 | None:intergenic | 25.0% |
| !! | AGGATTTTCATGTATTTTTC+TGG | - | chr8.4:23448131-23448150 | MS.gene011568:intron | 25.0% |
| !! | ATATTTTATGAAGCAAACTG+TGG | - | chr8.4:23448176-23448195 | MS.gene011568:intron | 25.0% |
| !! | GAATTTTGTCTATGAAATCT+GGG | - | chr8.4:23448062-23448081 | MS.gene011568:intron | 25.0% |
| !! | GGTTTCTATTTTATGTTAAC+GGG | - | chr8.4:23447094-23447113 | MS.gene011568:intron | 25.0% |
| !! | GTTTCTATTTTATGTTAACG+GGG | - | chr8.4:23447095-23447114 | MS.gene011568:intron | 25.0% |
| !! | TATTTTATGAAGCAAACTGT+GGG | - | chr8.4:23448177-23448196 | MS.gene011568:intron | 25.0% |
| !! | TCTGAAAAGTTACATTTTCA+GGG | - | chr8.4:23449207-23449226 | MS.gene011568:intron | 25.0% |
| !! | TGAATTTTGTCTATGAAATC+TGG | - | chr8.4:23448061-23448080 | MS.gene011568:intron | 25.0% |
| !! | TTTTGTAATTGCAACTTTCT+GGG | - | chr8.4:23450142-23450161 | MS.gene011568:intron | 25.0% |
| !! | TTTTTGTAATTGCAACTTTC+TGG | - | chr8.4:23450141-23450160 | MS.gene011568:intron | 25.0% |
| !!! | AGCAAGATTTTTTTATGCAT+AGG | + | chr8.4:23448939-23448958 | None:intergenic | 25.0% |
| !!! | AGCCAAATTTGTTTTGATAT+AGG | + | chr8.4:23450582-23450601 | None:intergenic | 25.0% |
| !!! | ATAACTTCTGAAATCAAGTT+TGG | - | chr8.4:23448243-23448262 | MS.gene011568:intron | 25.0% |
| !!! | ATACATCGAAATTTGTTGTA+TGG | + | chr8.4:23446646-23446665 | None:intergenic | 25.0% |
| !!! | CCAATTTTTAAGATTAGAAC+AGG | + | chr8.4:23446757-23446776 | None:intergenic | 25.0% |
| !!! | TACATCGAAATTTGTTGTAT+GGG | + | chr8.4:23446645-23446664 | None:intergenic | 25.0% |
| !!! | TGATAAAAGGTTCTTTTTTG+TGG | - | chr8.4:23448893-23448912 | MS.gene011568:intron | 25.0% |
| !!! | TTTGTTTTTTTATCCTGAAG+AGG | - | chr8.4:23450181-23450200 | MS.gene011568:intron | 25.0% |
| AAACAAATACACAGATAAGG+AGG | + | chr8.4:23447879-23447898 | None:intergenic | 30.0% | |
| AAACATTGTCAATACACGAA+AGG | + | chr8.4:23450347-23450366 | None:intergenic | 30.0% | |
| AAATCACAAGACTAAGACTA+TGG | + | chr8.4:23449770-23449789 | None:intergenic | 30.0% | |
| AACAAATACACAGATAAGGA+GGG | + | chr8.4:23447878-23447897 | None:intergenic | 30.0% | |
| AATTTCTTAAGTCATGGTTG+CGG | + | chr8.4:23449373-23449392 | None:intergenic | 30.0% | |
| ACTGGACAGAAAAAAAATAG+TGG | - | chr8.4:23447357-23447376 | MS.gene011568:intron | 30.0% | |
| AGAAAGAAATAGAGAAGGTT+TGG | + | chr8.4:23448623-23448642 | None:intergenic | 30.0% | |
| AGACCATGTGTTAATATACT+TGG | - | chr8.4:23450025-23450044 | MS.gene011568:intron | 30.0% | |
| AGTGTTTAAGCATTAATCAC+AGG | + | chr8.4:23449621-23449640 | None:intergenic | 30.0% | |
| ATATCAAAGAAATCCAGTGA+TGG | - | chr8.4:23451244-23451263 | MS.gene011568:CDS | 30.0% | |
| CCAAAAAATTGATCTGTAAC+TGG | - | chr8.4:23447339-23447358 | MS.gene011568:intron | 30.0% | |
| GAAAGAAATAGAGAAGGTTT+GGG | + | chr8.4:23448622-23448641 | None:intergenic | 30.0% | |
| GATTGAAATGAAGGATGAAA+AGG | + | chr8.4:23446549-23446568 | None:intergenic | 30.0% | |
| GTCAAAATTAGTCCTTTGAA+TGG | + | chr8.4:23447279-23447298 | None:intergenic | 30.0% | |
| TAATCTTAAAAATTGGTCCC+TGG | - | chr8.4:23446761-23446780 | MS.gene011568:intron | 30.0% | |
| TCACCAAGTATATTAACACA+TGG | + | chr8.4:23450031-23450050 | None:intergenic | 30.0% | |
| TCTGCATTAGATGAAGAAAT+GGG | + | chr8.4:23449496-23449515 | None:intergenic | 30.0% | |
| TGATGACTGATGAGTAATTA+TGG | - | chr8.4:23449101-23449120 | MS.gene011568:intron | 30.0% | |
| TGGGTGGAAGATAATATTTA+CGG | - | chr8.4:23447196-23447215 | MS.gene011568:intron | 30.0% | |
| TTAAGATGAAACCCTTGAAT+AGG | - | chr8.4:23448111-23448130 | MS.gene011568:intron | 30.0% | |
| TTCTGCATTAGATGAAGAAA+TGG | + | chr8.4:23449497-23449516 | None:intergenic | 30.0% | |
| TTTCCAAAAAAATTGGTTGG+TGG | - | chr8.4:23449905-23449924 | MS.gene011568:CDS | 30.0% | |
| TTTGGGAATTTCTTAAGTCA+TGG | + | chr8.4:23449379-23449398 | None:intergenic | 30.0% | |
| ! | AAAATTAGAGGAAAGGCATA+AGG | + | chr8.4:23449597-23449616 | None:intergenic | 30.0% |
| ! | AGACCGTCTTAAAACATTTT+GGG | - | chr8.4:23446728-23446747 | MS.gene011568:intron | 30.0% |
| ! | CAATATTTTCCCTGTAAATG+TGG | + | chr8.4:23447123-23447142 | None:intergenic | 30.0% |
| ! | GTTTGAAATATTTGTGATGC+AGG | - | chr8.4:23450368-23450387 | MS.gene011568:intron | 30.0% |
| ! | TTTACCTTCAACAAAGTACT+TGG | + | chr8.4:23450924-23450943 | None:intergenic | 30.0% |
| !! | ACTTGTTGGTTAGTGAATTT+TGG | - | chr8.4:23449995-23450014 | MS.gene011568:CDS | 30.0% |
| !! | CTCTGAAAAGTTACATTTTC+AGG | - | chr8.4:23449206-23449225 | MS.gene011568:intron | 30.0% |
| !! | CTTGTTGGTTAGTGAATTTT+GGG | - | chr8.4:23449996-23450015 | MS.gene011568:CDS | 30.0% |
| !! | GAAGAGCTCATAATTAGTTT+TGG | + | chr8.4:23450616-23450635 | None:intergenic | 30.0% |
| !! | GAGTGTTTCTTTTAAGTGTA+TGG | - | chr8.4:23447527-23447546 | MS.gene011568:intron | 30.0% |
| !! | GTAAGAAACCTCTAAAACAT+AGG | - | chr8.4:23450540-23450559 | MS.gene011568:intron | 30.0% |
| !! | TATTTTGAAAAGGAAGGTGT+GGG | - | chr8.4:23447177-23447196 | MS.gene011568:intron | 30.0% |
| !! | TTCATGTATTTTTCTGGTGT+AGG | - | chr8.4:23448137-23448156 | MS.gene011568:intron | 30.0% |
| !!! | AATTAGTTTTGGACATGTAC+AGG | + | chr8.4:23450605-23450624 | None:intergenic | 30.0% |
| !!! | ATTCCACCAACCAATTTTTT+TGG | + | chr8.4:23449911-23449930 | None:intergenic | 30.0% |
| !!! | CCAGTTACAGATCAATTTTT+TGG | + | chr8.4:23447342-23447361 | None:intergenic | 30.0% |
| !!! | GTTCCCAAAATGTTTTAAGA+CGG | + | chr8.4:23446734-23446753 | None:intergenic | 30.0% |
| !!! | TAAAAGGTTCTTTTTTGTGG+TGG | - | chr8.4:23448896-23448915 | MS.gene011568:intron | 30.0% |
| !!! | TTATTTTGAAAAGGAAGGTG+TGG | - | chr8.4:23447176-23447195 | MS.gene011568:intron | 30.0% |
| AAAAAATAACCTTGGCGGTA+AGG | + | chr8.4:23447835-23447854 | None:intergenic | 35.0% | |
| AAAAATAACCTTGGCGGTAA+GGG | + | chr8.4:23447834-23447853 | None:intergenic | 35.0% | |
| AAGGGGATATAGAAAAAGCA+CGG | + | chr8.4:23447816-23447835 | None:intergenic | 35.0% | |
| AATTAAGAGTAGCAGAGATG+AGG | + | chr8.4:23449880-23449899 | None:intergenic | 35.0% | |
| AATTGCAGATCGCGAAAAAA+TGG | + | chr8.4:23448493-23448512 | None:intergenic | 35.0% | |
| ACATTGAAGTTCAGAGAATC+TGG | + | chr8.4:23451217-23451236 | None:intergenic | 35.0% | |
| AGAACCTAACAACCAACTTA+AGG | + | chr8.4:23447425-23447444 | None:intergenic | 35.0% | |
| AGAGTGACTAAGATCCAAAT+TGG | + | chr8.4:23447467-23447486 | None:intergenic | 35.0% | |
| ATTGATTATGCCACCGTATT+AGG | + | chr8.4:23446813-23446832 | None:intergenic | 35.0% | |
| ATTGCACACTATGTGTTTGT+TGG | - | chr8.4:23447139-23447158 | MS.gene011568:intron | 35.0% | |
| CACAGGAAAAATTAGAGGAA+AGG | + | chr8.4:23449604-23449623 | None:intergenic | 35.0% | |
| CATCTAATCCATACACATCA+TGG | + | chr8.4:23447757-23447776 | None:intergenic | 35.0% | |
| CTTCCAAATCTTCCAAAAGA+TGG | - | chr8.4:23446478-23446497 | MS.gene011568:CDS | 35.0% | |
| GAAAACAGCAAAACACAATC+TGG | - | chr8.4:23449514-23449533 | MS.gene011568:CDS | 35.0% | |
| GAACCTAACAACCAACTTAA+GGG | + | chr8.4:23447424-23447443 | None:intergenic | 35.0% | |
| GAGATAACAGAGAGAAGATT+GGG | + | chr8.4:23449255-23449274 | None:intergenic | 35.0% | |
| GGGTGGAAGATAATATTTAC+GGG | - | chr8.4:23447197-23447216 | MS.gene011568:intron | 35.0% | |
| GGTGGAAGATAATATTTACG+GGG | - | chr8.4:23447198-23447217 | MS.gene011568:intron | 35.0% | |
| GTAATGCTTGTGGTACAATA+GGG | - | chr8.4:23448199-23448218 | MS.gene011568:intron | 35.0% | |
| GTCAATGACCATAATTCTGT+AGG | - | chr8.4:23451102-23451121 | MS.gene011568:intron | 35.0% | |
| GTGGAAGATAATATTTACGG+GGG | - | chr8.4:23447199-23447218 | MS.gene011568:intron | 35.0% | |
| GTTGCAATGTTATTGTATGC+AGG | - | chr8.4:23450840-23450859 | MS.gene011568:intron | 35.0% | |
| TAAGTAGGTAACCAAAAGTG+TGG | + | chr8.4:23450078-23450097 | None:intergenic | 35.0% | |
| TACTCATCAGTCATCATACA+AGG | + | chr8.4:23449097-23449116 | None:intergenic | 35.0% | |
| TCTGAACTCACTATGAGTAT+TGG | - | chr8.4:23449554-23449573 | MS.gene011568:CDS | 35.0% | |
| TTCATCTGTCTTCCATTCAA+AGG | - | chr8.4:23447264-23447283 | MS.gene011568:intron | 35.0% | |
| TTGATTATGCCACCGTATTA+GGG | + | chr8.4:23446812-23446831 | None:intergenic | 35.0% | |
| TTGGTTTAGTCATGCCAATT+TGG | - | chr8.4:23447450-23447469 | MS.gene011568:intron | 35.0% | |
| ! | AGGTCAGTGTTGTTAAATAG+CGG | - | chr8.4:23448332-23448351 | MS.gene011568:intron | 35.0% |
| ! | CAGACCGTCTTAAAACATTT+TGG | - | chr8.4:23446727-23446746 | MS.gene011568:intron | 35.0% |
| ! | GATAAAGCTTGGTTGTTGTT+GGG | + | chr8.4:23449711-23449730 | None:intergenic | 35.0% |
| ! | GATGAGTAATTATGGTGTTG+TGG | - | chr8.4:23449109-23449128 | MS.gene011568:intron | 35.0% |
| !! | AAGCCATCTTTTGGAAGATT+TGG | + | chr8.4:23446484-23446503 | None:intergenic | 35.0% |
| !! | AGATGATGAGCTTTTGGAAA+TGG | - | chr8.4:23447772-23447791 | MS.gene011568:intron | 35.0% |
| !! | ATACCCTTAAGTTGGTTGTT+AGG | - | chr8.4:23447418-23447437 | MS.gene011568:intron | 35.0% |
| !! | CTTTTGGAAGATTTGGAAGA+AGG | + | chr8.4:23446477-23446496 | None:intergenic | 35.0% |
| !! | GGTTGTTAGGTTCTAGATAT+TGG | - | chr8.4:23447431-23447450 | MS.gene011568:intron | 35.0% |
| !! | TGGATTAGATGATGAGCTTT+TGG | - | chr8.4:23447766-23447785 | MS.gene011568:intron | 35.0% |
| !! | TTGGTTAGTGAATTTTGGGT+GGG | - | chr8.4:23450000-23450019 | MS.gene011568:CDS | 35.0% |
| !!! | ATCAATTTTTTGGCTACTGC+AGG | + | chr8.4:23447332-23447351 | None:intergenic | 35.0% |
| !!! | CAAAATGTTTTAAGACGGTC+TGG | + | chr8.4:23446729-23446748 | None:intergenic | 35.0% |
| !!! | GTTGCTTTTGTTATCAGTTG+AGG | - | chr8.4:23448529-23448548 | MS.gene011568:intron | 35.0% |
| AAAATAACCTTGGCGGTAAG+GGG | + | chr8.4:23447833-23447852 | None:intergenic | 40.0% | |
| AAACCTGGTTCATGACATCA+GGG | + | chr8.4:23446521-23446540 | None:intergenic | 40.0% | |
| AAAGTGTGGTAGTCTCTTAG+TGG | + | chr8.4:23450064-23450083 | None:intergenic | 40.0% | |
| AATGGAAGACAGATGAAAGC+TGG | + | chr8.4:23447261-23447280 | None:intergenic | 40.0% | |
| ACCACTTGACAACAACATCA+TGG | + | chr8.4:23451053-23451072 | None:intergenic | 40.0% | |
| ACCATGATGTTGTTGTCAAG+TGG | - | chr8.4:23451049-23451068 | MS.gene011568:intron | 40.0% | |
| ACTGTGCTAAACTAGACTAG+AGG | + | chr8.4:23449407-23449426 | None:intergenic | 40.0% | |
| AGCATTTAACGACACTGCAT+AGG | + | chr8.4:23450657-23450676 | None:intergenic | 40.0% | |
| AGGCACACTTTGACTATCAA+AGG | + | chr8.4:23447312-23447331 | None:intergenic | 40.0% | |
| ATGAAGAAATGGGAGGACTT+AGG | + | chr8.4:23449486-23449505 | None:intergenic | 40.0% | |
| ATGTAGCTAACCTCACTTAG+TGG | + | chr8.4:23449734-23449753 | None:intergenic | 40.0% | |
| CGAGATAACAGAGAGAAGAT+TGG | + | chr8.4:23449256-23449275 | None:intergenic | 40.0% | |
| CTCACCAAGTACTTTGTTGA+AGG | - | chr8.4:23450917-23450936 | MS.gene011568:intron | 40.0% | |
| CTGTGCTAAACTAGACTAGA+GGG | + | chr8.4:23449406-23449425 | None:intergenic | 40.0% | |
| CTTCAAATCCACTGCAAACT+TGG | - | chr8.4:23448571-23448590 | MS.gene011568:intron | 40.0% | |
| GAAATAGAGAAGGTTTGGGT+AGG | + | chr8.4:23448618-23448637 | None:intergenic | 40.0% | |
| GATGAAAAGGGATAGAAACC+TGG | + | chr8.4:23446536-23446555 | None:intergenic | 40.0% | |
| GCACAGCTATAACTGCTATT+TGG | + | chr8.4:23450727-23450746 | None:intergenic | 40.0% | |
| GCATTAGATGAAGAAATGGG+AGG | + | chr8.4:23449493-23449512 | None:intergenic | 40.0% | |
| GCTATAGCGTTATTGCATAG+CGG | - | chr8.4:23448356-23448375 | MS.gene011568:intron | 40.0% | |
| GGATAAAGCTTGGTTGTTGT+TGG | + | chr8.4:23449712-23449731 | None:intergenic | 40.0% | |
| GGTAATGCTTGTGGTACAAT+AGG | - | chr8.4:23448198-23448217 | MS.gene011568:intron | 40.0% | |
| GGTGAACTTTATGAGCTTGA+TGG | - | chr8.4:23450861-23450880 | MS.gene011568:intron | 40.0% | |
| GTTATCAGTCTGAAGAAGAG+AGG | - | chr8.4:23447955-23447974 | MS.gene011568:intron | 40.0% | |
| TAGCAGTTATAGCTGTGCAA+TGG | - | chr8.4:23450729-23450748 | MS.gene011568:intron | 40.0% | |
| TCACTTAGTGGGATAAAGCT+TGG | + | chr8.4:23449722-23449741 | None:intergenic | 40.0% | |
| TGAGCTTGATGGAAGAAAGT+CGG | - | chr8.4:23450872-23450891 | MS.gene011568:intron | 40.0% | |
| TGATTATGCCACCGTATTAG+GGG | + | chr8.4:23446811-23446830 | None:intergenic | 40.0% | |
| TGCTAGATTGGGAGATCATT+GGG | + | chr8.4:23449445-23449464 | None:intergenic | 40.0% | |
| TGTAGCTAACCTCACTTAGT+GGG | + | chr8.4:23449733-23449752 | None:intergenic | 40.0% | |
| TGTGGTAAGACTAACGAGAT+TGG | + | chr8.4:23449842-23449861 | None:intergenic | 40.0% | |
| TTAAAAGGCCCCTAATCTTG+AGG | - | chr8.4:23446959-23446978 | MS.gene011568:intron | 40.0% | |
| TTTCATCTGCTATGCTTGTG+TGG | - | chr8.4:23450413-23450432 | MS.gene011568:intron | 40.0% | |
| ! | AACAAAGTACTTGGTGAGGA+TGG | + | chr8.4:23450915-23450934 | None:intergenic | 40.0% |
| ! | AAGCTTTATCCCACTAAGTG+AGG | - | chr8.4:23449721-23449740 | MS.gene011568:intron | 40.0% |
| ! | CTAAGAGACTACCACACTTT+TGG | - | chr8.4:23450064-23450083 | MS.gene011568:intron | 40.0% |
| ! | CTTCAACAAAGTACTTGGTG+AGG | + | chr8.4:23450919-23450938 | None:intergenic | 40.0% |
| ! | GTTGGTTAGTGAATTTTGGG+TGG | - | chr8.4:23449999-23450018 | MS.gene011568:CDS | 40.0% |
| ! | TATGCAGTGTCGTTAAATGC+TGG | - | chr8.4:23450656-23450675 | MS.gene011568:intron | 40.0% |
| ! | TGTTGTCAAGTGGTGCTTTT+GGG | - | chr8.4:23451059-23451078 | MS.gene011568:intron | 40.0% |
| ! | TTCAAGAGGAAGCCATCTTT+TGG | + | chr8.4:23446493-23446512 | None:intergenic | 40.0% |
| ! | TTGTTGTCAAGTGGTGCTTT+TGG | - | chr8.4:23451058-23451077 | MS.gene011568:intron | 40.0% |
| !! | AGCTAGCTCCTATGTTTTAG+AGG | + | chr8.4:23450551-23450570 | None:intergenic | 40.0% |
| !!! | AATGTTTTAAGACGGTCTGG+TGG | + | chr8.4:23446726-23446745 | None:intergenic | 40.0% |
| AACACAGGGCCTCAAGATTA+GGG | + | chr8.4:23446971-23446990 | None:intergenic | 45.0% | |
| AACGGGGTTCCACATTTACA+GGG | - | chr8.4:23447111-23447130 | MS.gene011568:intron | 45.0% | |
| AAGACAGATGAAAGCTGGAG+GGG | + | chr8.4:23447256-23447275 | None:intergenic | 45.0% | |
| AATCTTGAGGCCCTGTGTTA+AGG | - | chr8.4:23446972-23446991 | MS.gene011568:intron | 45.0% | |
| AATGTGGTAGCAGTACCAAG+TGG | + | chr8.4:23447227-23447246 | None:intergenic | 45.0% | |
| AGGAACACGTAACCTGCATT+GGG | + | chr8.4:23448598-23448617 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | chr8.4:23449860-23449879 | None:intergenic | 45.0% | |
| ATAGGGCTTCTTCATGCTCT+TGG | - | chr8.4:23448216-23448235 | MS.gene011568:intron | 45.0% | |
| ATATTTACGGGGGTTCCACT+TGG | - | chr8.4:23447209-23447228 | MS.gene011568:intron | 45.0% | |
| ATCTGCTATGCTTGTGTGGA+TGG | - | chr8.4:23450417-23450436 | MS.gene011568:intron | 45.0% | |
| ATCTTGAGGCCCTGTGTTAA+GGG | - | chr8.4:23446973-23446992 | MS.gene011568:intron | 45.0% | |
| ATTATGCCACCGTATTAGGG+GGG | + | chr8.4:23446809-23446828 | None:intergenic | 45.0% | |
| CAAACTGTGGGTAATGCTTG+TGG | - | chr8.4:23448189-23448208 | MS.gene011568:intron | 45.0% | |
| CAGAGATGAGGATGTTGTGT+TGG | + | chr8.4:23449868-23449887 | None:intergenic | 45.0% | |
| CATCCAGAGCATGATTCAGA+AGG | - | chr8.4:23451189-23451208 | MS.gene011568:intron | 45.0% | |
| CGATCTGCAATTGACAACAC+TGG | - | chr8.4:23448501-23448520 | MS.gene011568:intron | 45.0% | |
| CTAATCCGTTCCTCCTATCT+CGG | + | chr8.4:23450108-23450127 | None:intergenic | 45.0% | |
| CTTAGGAAAGGAGGACTGAT+CGG | + | chr8.4:23449469-23449488 | None:intergenic | 45.0% | |
| CTTGAAGACCAAGACCAGAA+AGG | + | chr8.4:23447718-23447737 | None:intergenic | 45.0% | |
| GAAACCTGGTTCATGACATC+AGG | + | chr8.4:23446522-23446541 | None:intergenic | 45.0% | |
| GAAATGGGAGGACTTAGGAA+AGG | + | chr8.4:23449481-23449500 | None:intergenic | 45.0% | |
| GAAGACAGATGAAAGCTGGA+GGG | + | chr8.4:23447257-23447276 | None:intergenic | 45.0% | |
| GAAGATTGGGTCTAATGACG+TGG | + | chr8.4:23449242-23449261 | None:intergenic | 45.0% | |
| GATCCTTCTGAATCATGCTC+TGG | + | chr8.4:23451195-23451214 | None:intergenic | 45.0% | |
| GATTATGCCACCGTATTAGG+GGG | + | chr8.4:23446810-23446829 | None:intergenic | 45.0% | |
| GGTGGAAGATACCCTTAAGT+TGG | - | chr8.4:23447410-23447429 | MS.gene011568:intron | 45.0% | |
| GTCTCGGTCACATTATGCAA+AGG | + | chr8.4:23449644-23449663 | None:intergenic | 45.0% | |
| GTGCTAGATTGGGAGATCAT+TGG | + | chr8.4:23449446-23449465 | None:intergenic | 45.0% | |
| TAACACAGGGCCTCAAGATT+AGG | + | chr8.4:23446972-23446991 | None:intergenic | 45.0% | |
| TAACCCTGATGTCATGAACC+AGG | - | chr8.4:23446515-23446534 | MS.gene011568:CDS | 45.0% | |
| TAACGGGGTTCCACATTTAC+AGG | - | chr8.4:23447110-23447129 | MS.gene011568:intron | 45.0% | |
| TAATCCGTTCCTCCTATCTC+GGG | + | chr8.4:23450107-23450126 | None:intergenic | 45.0% | |
| TACTTACCTTGACCCGAGAT+AGG | - | chr8.4:23450092-23450111 | MS.gene011568:intron | 45.0% | |
| TAGGAACACGTAACCTGCAT+TGG | + | chr8.4:23448599-23448618 | None:intergenic | 45.0% | |
| TATCTCGGGTCAAGGTAAGT+AGG | + | chr8.4:23450093-23450112 | None:intergenic | 45.0% | |
| TCAAATTGGCCCCCCTAATA+CGG | - | chr8.4:23446797-23446816 | MS.gene011568:intron | 45.0% | |
| TCATTGGGAGTCATGAGGTA+TGG | + | chr8.4:23449430-23449449 | None:intergenic | 45.0% | |
| TCATTGTAGTCATTCGCCGT+GGG | - | chr8.4:23447389-23447408 | MS.gene011568:intron | 45.0% | |
| TCTCGAGAATGACACAGAGA+TGG | - | chr8.4:23448740-23448759 | MS.gene011568:intron | 45.0% | |
| TGCTAAACTAGACTAGAGGG+TGG | + | chr8.4:23449403-23449422 | None:intergenic | 45.0% | |
| TGTACTATACTGCGTATCGC+AGG | + | chr8.4:23448403-23448422 | None:intergenic | 45.0% | |
| TGTGAGTTGCAGTTCCTTTC+TGG | - | chr8.4:23447701-23447720 | MS.gene011568:intron | 45.0% | |
| TTAGGAAAGGAGGACTGATC+GGG | + | chr8.4:23449468-23449487 | None:intergenic | 45.0% | |
| ! | AGAAAAAGCACGGCAAGAAC+AGG | + | chr8.4:23447806-23447825 | None:intergenic | 45.0% |
| ! | CTGCAAAGTTTTGCCTCTTC+AGG | + | chr8.4:23450197-23450216 | None:intergenic | 45.0% |
| ! | CTTCTGAATCATGCTCTGGA+TGG | + | chr8.4:23451191-23451210 | None:intergenic | 45.0% |
| ! | GAGGAAAGGCATAAGGCTAA+AGG | + | chr8.4:23449590-23449609 | None:intergenic | 45.0% |
| ! | TTGCAGTTCCTTTCTGGTCT+TGG | - | chr8.4:23447707-23447726 | MS.gene011568:intron | 45.0% |
| ! | TTTGAAAAGGAAGGTGTGGG+TGG | - | chr8.4:23447180-23447199 | MS.gene011568:intron | 45.0% |
| !! | ACATCAGGGTTAGCTTCAAG+AGG | + | chr8.4:23446507-23446526 | None:intergenic | 45.0% |
| !! | TTAAGGGTATCTTCCACCCA+CGG | + | chr8.4:23447408-23447427 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAAAAAAACTAT+AGG | + | chr8.4:23447643-23447662 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAAAAACTATA+GGG | + | chr8.4:23447642-23447661 | None:intergenic | 5.0% |
| AAGTCGGCACCAATATCCCA+TGG | - | chr8.4:23450888-23450907 | MS.gene011568:intron | 50.0% | |
| ACAAACCCCCCACCTCAAAA+AGG | + | chr8.4:23447069-23447088 | None:intergenic | 50.0% | |
| ACACAGGGCCTCAAGATTAG+GGG | + | chr8.4:23446970-23446989 | None:intergenic | 50.0% | |
| ACTAGACTAGAGGGTGGCTT+TGG | + | chr8.4:23449397-23449416 | None:intergenic | 50.0% | |
| ACTGCATAGGCAACTGCAGA+AGG | + | chr8.4:23450644-23450663 | None:intergenic | 50.0% | |
| ATCCTCTGCAAGTGGCATCA+AGG | + | chr8.4:23446999-23447018 | None:intergenic | 50.0% | |
| ATGGGAGGACTTAGGAAAGG+AGG | + | chr8.4:23449478-23449497 | None:intergenic | 50.0% | |
| CAAACCCCCCACCTCAAAAA+GGG | + | chr8.4:23447068-23447087 | None:intergenic | 50.0% | |
| CAAGAAGACCAAGACCAACG+TGG | + | chr8.4:23449312-23449331 | None:intergenic | 50.0% | |
| CACGGCGAATGACTACAATG+AGG | + | chr8.4:23447390-23447409 | None:intergenic | 50.0% | |
| CATTGGGTCCAAGTTTGCAG+TGG | + | chr8.4:23448582-23448601 | None:intergenic | 50.0% | |
| CCACATCTCTTCCACTAGTC+TGG | - | chr8.4:23447029-23447048 | MS.gene011568:intron | 50.0% | |
| CCAGACTAGTGGAAGAGATG+TGG | + | chr8.4:23447032-23447051 | None:intergenic | 50.0% | |
| CGAGAATGACACAGAGATGG+AGG | - | chr8.4:23448743-23448762 | MS.gene011568:intron | 50.0% | |
| CTAGACTAGAGGGTGGCTTT+GGG | + | chr8.4:23449396-23449415 | None:intergenic | 50.0% | |
| CTCATTGTAGTCATTCGCCG+TGG | - | chr8.4:23447388-23447407 | MS.gene011568:intron | 50.0% | |
| CTGCATAGGCAACTGCAGAA+GGG | + | chr8.4:23450643-23450662 | None:intergenic | 50.0% | |
| GACTGATCGGGTGCTAGATT+GGG | + | chr8.4:23449456-23449475 | None:intergenic | 50.0% | |
| GAGGATGGACCATGGGATAT+TGG | + | chr8.4:23450900-23450919 | None:intergenic | 50.0% | |
| GCATCAAGGCCCTTAACACA+GGG | + | chr8.4:23446985-23447004 | None:intergenic | 50.0% | |
| GGAAGACAGATGAAAGCTGG+AGG | + | chr8.4:23447258-23447277 | None:intergenic | 50.0% | |
| GGAGATCATTGGGAGTCATG+AGG | + | chr8.4:23449435-23449454 | None:intergenic | 50.0% | |
| TACCTCTGTATCACCAGCAG+TGG | + | chr8.4:23448787-23448806 | None:intergenic | 50.0% | |
| TCTATATCCCCTTACCGCCA+AGG | - | chr8.4:23447823-23447842 | MS.gene011568:intron | 50.0% | |
| TGCAAACTTGGACCCAATGC+AGG | - | chr8.4:23448583-23448602 | MS.gene011568:intron | 50.0% | |
| TTACCTTGACCCGAGATAGG+AGG | - | chr8.4:23450095-23450114 | MS.gene011568:intron | 50.0% | |
| TTGACCCGAGATAGGAGGAA+CGG | - | chr8.4:23450100-23450119 | MS.gene011568:intron | 50.0% | |
| ! | ACTTGGTGAGGATGGACCAT+GGG | + | chr8.4:23450907-23450926 | None:intergenic | 50.0% |
| ! | GCAGAGTGCCATGATGTGTA+TGG | - | chr8.4:23447746-23447765 | MS.gene011568:intron | 50.0% |
| ! | TACTTGGTGAGGATGGACCA+TGG | + | chr8.4:23450908-23450927 | None:intergenic | 50.0% |
| ! | TATAGTCGCCACGTTGGTCT+TGG | - | chr8.4:23449301-23449320 | MS.gene011568:intron | 50.0% |
| ! | TGATGCCACTTGCAGAGGAT+TGG | - | chr8.4:23446999-23447018 | MS.gene011568:intron | 50.0% |
| ! | TGGCGACTATAGTGTCGAAC+TGG | + | chr8.4:23449292-23449311 | None:intergenic | 50.0% |
| !!! | GTTTTAAGACGGTCTGGTGG+CGG | + | chr8.4:23446723-23446742 | None:intergenic | 50.0% |
| AATTGGCCCCCCTAATACGG+TGG | - | chr8.4:23446800-23446819 | MS.gene011568:CDS | 55.0% | |
| ACCGACCCTCTTTCTCCCTT+CGG | - | chr8.4:23446688-23446707 | MS.gene011568:intron | 55.0% | |
| AGCACGGCAAGAACAGGCTT+TGG | + | chr8.4:23447800-23447819 | None:intergenic | 55.0% | |
| AGCCACTGCTGGTGATACAG+AGG | - | chr8.4:23448782-23448801 | MS.gene011568:intron | 55.0% | |
| AGTGGAAGAGATGTGGCGCA+AGG | + | chr8.4:23447025-23447044 | None:intergenic | 55.0% | |
| CAAGGCCAATCCTCTGCAAG+TGG | + | chr8.4:23447007-23447026 | None:intergenic | 55.0% | |
| CATAGGCAACTGCAGAAGGG+AGG | + | chr8.4:23450640-23450659 | None:intergenic | 55.0% | |
| CATTCTGTAGCAGCCACTGC+TGG | - | chr8.4:23448771-23448790 | MS.gene011568:intron | 55.0% | |
| CCCACCTCAAAAAGGGAGGA+GGG | + | chr8.4:23447061-23447080 | None:intergenic | 55.0% | |
| CCTCAAAAAGGGAGGAGGGA+AGG | + | chr8.4:23447057-23447076 | None:intergenic | 55.0% | |
| CGACACTATAGTCGCCACGT+TGG | - | chr8.4:23449295-23449314 | MS.gene011568:intron | 55.0% | |
| GCTGGAGGGGATGCATAATG+TGG | + | chr8.4:23447243-23447262 | None:intergenic | 55.0% | |
| GGACTGATCGGGTGCTAGAT+TGG | + | chr8.4:23449457-23449476 | None:intergenic | 55.0% | |
| GGCATCAAGGCCCTTAACAC+AGG | + | chr8.4:23446986-23447005 | None:intergenic | 55.0% | |
| GTTCCTCCTATCTCGGGTCA+AGG | + | chr8.4:23450101-23450120 | None:intergenic | 55.0% | |
| TTGTAGTCATTCGCCGTGGG+TGG | - | chr8.4:23447392-23447411 | MS.gene011568:intron | 55.0% | |
| ! | CCTTCCCTCCTCCCTTTTTG+AGG | - | chr8.4:23447054-23447073 | MS.gene011568:intron | 55.0% |
| !! | GCAATGGCACTGATGCTCAG+TGG | - | chr8.4:23450745-23450764 | MS.gene011568:intron | 55.0% |
| !! | TCCCTCCTCCCTTTTTGAGG+TGG | - | chr8.4:23447057-23447076 | MS.gene011568:intron | 55.0% |
| !!! | CCCTCCTCCCTTTTTGAGGT+GGG | - | chr8.4:23447058-23447077 | MS.gene011568:intron | 55.0% |
| !!! | CCTCCTCCCTTTTTGAGGTG+GGG | - | chr8.4:23447059-23447078 | MS.gene011568:intron | 55.0% |
| !!! | CTCCTCCCTTTTTGAGGTGG+GGG | - | chr8.4:23447060-23447079 | MS.gene011568:intron | 55.0% |
| !!! | TCCTCCCTTTTTGAGGTGGG+GGG | - | chr8.4:23447061-23447080 | MS.gene011568:intron | 55.0% |
| ACCCCCCACCTCAAAAAGGG+AGG | + | chr8.4:23447065-23447084 | None:intergenic | 60.0% | |
| ACGAGGCCGAAGGGAGAAAG+AGG | + | chr8.4:23446697-23446716 | None:intergenic | 60.0% | |
| CCCCACCTCAAAAAGGGAGG+AGG | + | chr8.4:23447062-23447081 | None:intergenic | 60.0% | |
| CGAGGCCGAAGGGAGAAAGA+GGG | + | chr8.4:23446696-23446715 | None:intergenic | 60.0% | |
| GAGGGAAGGCTCCAGACTAG+TGG | + | chr8.4:23447043-23447062 | None:intergenic | 60.0% | |
| GCCGAAGGGAGAAAGAGGGT+CGG | + | chr8.4:23446692-23446711 | None:intergenic | 60.0% | |
| ! | GAGGTGGGGGGTTTGTTCTC+TGG | - | chr8.4:23447073-23447092 | MS.gene011568:intron | 60.0% |
| ! | GGCCTTGATGCCACTTGCAG+AGG | - | chr8.4:23446994-23447013 | MS.gene011568:intron | 60.0% |
| TGGCGGTGCACGAGGCCGAA+GGG | + | chr8.4:23446706-23446725 | None:intergenic | 70.0% | |
| GTGGCGGTGCACGAGGCCGA+AGG | + | chr8.4:23446707-23446726 | None:intergenic | 75.0% | |
| !! | CGGTCTGGTGGCGGTGCACG+AGG | + | chr8.4:23446714-23446733 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 23446465 | 23451273 | 23446465 | ID=MS.gene011568 |
| chr8.4 | mRNA | 23446465 | 23451273 | 23446465 | ID=MS.gene011568.t1;Parent=MS.gene011568 |
| chr8.4 | exon | 23451202 | 23451273 | 23451202 | ID=MS.gene011568.t1.exon1;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23451202 | 23451273 | 23451202 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23449894 | 23450025 | 23449894 | ID=MS.gene011568.t1.exon2;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23449894 | 23450025 | 23449894 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23449737 | 23449775 | 23449737 | ID=MS.gene011568.t1.exon3;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23449737 | 23449775 | 23449737 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23449474 | 23449579 | 23449474 | ID=MS.gene011568.t1.exon4;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23449474 | 23449579 | 23449474 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23449134 | 23449192 | 23449134 | ID=MS.gene011568.t1.exon5;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23449134 | 23449192 | 23449134 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23448935 | 23449009 | 23448935 | ID=MS.gene011568.t1.exon6;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23448935 | 23449009 | 23448935 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23447300 | 23447348 | 23447300 | ID=MS.gene011568.t1.exon7;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23447300 | 23447348 | 23447300 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23446800 | 23446876 | 23446800 | ID=MS.gene011568.t1.exon8;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23446800 | 23446876 | 23446800 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| chr8.4 | exon | 23446465 | 23446563 | 23446465 | ID=MS.gene011568.t1.exon9;Parent=MS.gene011568.t1 |
| chr8.4 | CDS | 23446465 | 23446563 | 23446465 | ID=cds.MS.gene011568.t1;Parent=MS.gene011568.t1 |
| Gene Sequence |
| Protein sequence |
