AlfalfaGEDB | MS.gene006731

M. sativa cultivar XinJiangDaYe / MS.gene006731

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00240.26 PF10790.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006731.t1	RHN39336.1	100	305	0	0	1	305	232	536	3.80E-164	587.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006731.t1	P0CG85	100.0	305	0	0	1	305	153	457	9.1e-167	587.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006731.t1	M5WG80	100.0	305	0	0	1	305	1	305	2.7e-164	587.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene006731	MS.gene73491	PPI
MS.gene006731	MS.gene28966	PPI
MS.gene43279	MS.gene006731	PPI
MS.gene006731	MS.gene022269	PPI
MS.gene60331	MS.gene006731	PPI
MS.gene20814	MS.gene006731	PPI
MS.gene006731	MS.gene97484	PPI
MS.gene06897	MS.gene006731	PPI
MS.gene006731	MS.gene75011	PPI
MS.gene006731	MS.gene001116	PPI
MS.gene006731	MS.gene033210	PPI
MS.gene006731	MS.gene056537	PPI
MS.gene006731	MS.gene30401	PPI
MS.gene006731	MS.gene067895	PPI
MS.gene006731	MS.gene56989	PPI
MS.gene006731	MS.gene071145	PPI
MS.gene006731	MS.gene09697	PPI
MS.gene006731	MS.gene83571	PPI
MS.gene006731	MS.gene065539	PPI
MS.gene02587	MS.gene006731	PPI
MS.gene006731	MS.gene63795	PPI
MS.gene006731	MS.gene72846	PPI
MS.gene70595	MS.gene006731	PPI
MS.gene025687	MS.gene006731	PPI
MS.gene006731	MS.gene08756	PPI
MS.gene006731	MS.gene73500	PPI
MS.gene006731	MS.gene56987	PPI
MS.gene011610	MS.gene006731	PPI
MS.gene006731	MS.gene007678	PPI
MS.gene006731	MS.gene022662	PPI
MS.gene006731	MS.gene24606	PPI
MS.gene08694	MS.gene006731	PPI
MS.gene006731	MS.gene009804	PPI
MS.gene006731	MS.gene071146	PPI
MS.gene85935	MS.gene006731	PPI
MS.gene08994	MS.gene006731	PPI
MS.gene44289	MS.gene006731	PPI
MS.gene006731	MS.gene027729	PPI
MS.gene006731	MS.gene07025	PPI
MS.gene006731	MS.gene005556	PPI
MS.gene006731	MS.gene50207	PPI
MS.gene045055	MS.gene006731	PPI
MS.gene006731	MS.gene022937	PPI
MS.gene54158	MS.gene006731	PPI
MS.gene78528	MS.gene006731	PPI
MS.gene006731	MS.gene73784	PPI
MS.gene28784	MS.gene006731	PPI
MS.gene029856	MS.gene006731	PPI
MS.gene006731	MS.gene052262	PPI
MS.gene86974	MS.gene006731	PPI
MS.gene006731	MS.gene050131	PPI
MS.gene006731	MS.gene061817	PPI
MS.gene006731	MS.gene07247	PPI
MS.gene006731	MS.gene25922	PPI
MS.gene006731	MS.gene09251	PPI
MS.gene003415	MS.gene006731	PPI
MS.gene006731	MS.gene61288	PPI
MS.gene39380	MS.gene006731	PPI
MS.gene006731	MS.gene50205	PPI
MS.gene61248	MS.gene006731	PPI
MS.gene006731	MS.gene86222	PPI
MS.gene06688	MS.gene006731	PPI
MS.gene006731	MS.gene072037	PPI
MS.gene006731	MS.gene015360	PPI
MS.gene54156	MS.gene006731	PPI
MS.gene97486	MS.gene006731	PPI
MS.gene54199	MS.gene006731	PPI
MS.gene029829	MS.gene006731	PPI
MS.gene72347	MS.gene006731	PPI
MS.gene006731	MS.gene26108	PPI
MS.gene006731	MS.gene46385	PPI
MS.gene073684	MS.gene006731	PPI
MS.gene006731	MS.gene20769	PPI
MS.gene033685	MS.gene006731	PPI
MS.gene006731	MS.gene070097	PPI
MS.gene89169	MS.gene006731	PPI
MS.gene072722	MS.gene006731	PPI
MS.gene006731	MS.gene00641	PPI
MS.gene006731	MS.gene047179	PPI
MS.gene006731	MS.gene065547	PPI
MS.gene82967	MS.gene006731	PPI
MS.gene057124	MS.gene006731	PPI
MS.gene006731	MS.gene028061	PPI
MS.gene006731	MS.gene067451	PPI
MS.gene006731	MS.gene83422	PPI
MS.gene006731	MS.gene011568	PPI
MS.gene006731	MS.gene29165	PPI
MS.gene006731	MS.gene71988	PPI
MS.gene006731	MS.gene72384	PPI
MS.gene006731	MS.gene08695	PPI
MS.gene013805	MS.gene006731	PPI
MS.gene006731	MS.gene009802	PPI
MS.gene013571	MS.gene006731	PPI
MS.gene006731	MS.gene074383	PPI
MS.gene006731	MS.gene002068	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006731.t1	MTR_4g088495	100.000	305	0	0	1	305	533	837	0.0	605
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	229	533	0.0	602
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	305	609	0.0	602
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	381	685	0.0	602
MS.gene006731.t1	MTR_4g088495	99.672	305	1	0	1	305	457	761	0.0	602
MS.gene006731.t1	MTR_4g088495	99.344	305	2	0	1	305	1	305	0.0	598
MS.gene006731.t1	MTR_4g080797	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene006731.t1	MTR_4g080797	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_8g018230	100.000	305	0	0	1	305	229	533	0.0	604
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene006731.t1	MTR_8g018230	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	MTR_8g018230	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	MTR_8g018230	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene006731.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	77	381	0.0	603
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_4g091580	99.672	305	1	0	1	305	77	381	0.0	603
MS.gene006731.t1	MTR_4g091580	99.344	305	2	0	1	305	1	305	0.0	600
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	603
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	229	533	0.0	603
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	MTR_4g081010	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene006731.t1	MTR_8g081020	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_8g081020	100.000	304	0	0	1	304	77	380	0.0	602
MS.gene006731.t1	MTR_4g091580	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	MTR_4g091580	99.344	305	2	0	1	305	229	533	0.0	600
MS.gene006731.t1	MTR_4g091580	99.016	305	3	0	1	305	77	381	0.0	597
MS.gene006731.t1	MTR_4g091580	99.016	305	3	0	1	305	153	457	0.0	597
MS.gene006731.t1	MTR_6g061930	94.426	305	2	1	1	305	1	290	0.0	561
MS.gene006731.t1	MTR_8g018230	88.525	305	0	1	1	305	1	270	0.0	517
MS.gene006731.t1	MTR_4g081010	100.000	244	0	0	1	244	1	244	3.82e-174	483
MS.gene006731.t1	MTR_4g081010	99.563	229	1	0	77	305	1	229	1.24e-162	454
MS.gene006731.t1	MTR_7g116360	100.000	229	0	0	77	305	1	229	7.75e-164	455
MS.gene006731.t1	MTR_7g116360	99.563	229	1	0	1	229	1	229	8.65e-163	452
MS.gene006731.t1	MTR_7g116360	100.000	229	0	0	77	305	49	277	1.61e-163	456
MS.gene006731.t1	MTR_7g116360	99.563	229	1	0	1	229	49	277	1.68e-162	453
MS.gene006731.t1	MTR_1g066390	100.000	228	0	0	1	228	1	228	1.07e-162	452
MS.gene006731.t1	MTR_1g066390	100.000	228	0	0	77	304	1	228	1.07e-162	452
MS.gene006731.t1	MTR_4g088485	93.450	229	0	1	77	305	1	214	6.52e-149	416
MS.gene006731.t1	MTR_4g088485	93.013	229	1	1	1	229	1	214	7.03e-148	414
MS.gene006731.t1	MTR_4g080920	89.035	228	25	0	1	228	1	228	8.36e-143	402
MS.gene006731.t1	MTR_4g080920	89.035	228	25	0	77	304	1	228	8.36e-143	402
MS.gene006731.t1	MTR_8g479250	67.949	312	53	6	1	300	1	277	1.80e-121	350
MS.gene006731.t1	MTR_8g479250	65.145	241	48	5	77	305	1	217	1.53e-83	254
MS.gene006731.t1	MTR_5g092700	80.263	152	30	0	1	152	1	152	3.01e-82	245
MS.gene006731.t1	MTR_5g092700	80.263	152	30	0	77	228	1	152	3.01e-82	245
MS.gene006731.t1	MTR_5g092700	80.263	152	30	0	153	304	1	152	3.01e-82	245
MS.gene006731.t1	MTR_4g073580	80.263	152	30	0	1	152	1	152	3.01e-82	245
MS.gene006731.t1	MTR_4g073580	80.263	152	30	0	77	228	1	152	3.01e-82	245
MS.gene006731.t1	MTR_4g073580	80.263	152	30	0	153	304	1	152	3.01e-82	245
MS.gene006731.t1	MTR_4g073580	67.033	182	30	1	1	152	1	182	1.22e-75	229
MS.gene006731.t1	MTR_4g073580	67.033	182	30	1	77	228	1	182	1.22e-75	229
MS.gene006731.t1	MTR_4g073580	67.033	182	30	1	153	304	1	182	1.22e-75	229
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	1	77	1	77	4.66e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	77	153	1	77	4.66e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	153	229	1	77	4.66e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	229	305	1	77	6.44e-48	157
MS.gene006731.t1	MTR_7g105080	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene006731.t1	MTR_7g105080	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene006731.t1	MTR_7g105080	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene006731.t1	MTR_7g105080	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene006731.t1	MTR_3g092130	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene006731.t1	MTR_1g059690	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene006731.t1	MTR_1g059690	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene006731.t1	MTR_1g059690	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene006731.t1	MTR_1g059690	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene006731.t1	MTR_8g088060	97.436	78	2	0	1	78	1	78	2.71e-47	156
MS.gene006731.t1	MTR_8g088060	97.436	78	2	0	77	154	1	78	2.71e-47	156
MS.gene006731.t1	MTR_8g088060	97.436	78	2	0	153	230	1	78	2.71e-47	156
MS.gene006731.t1	MTR_8g088060	100.000	76	0	0	229	304	1	76	3.19e-47	156
MS.gene006731.t1	MTR_5g033960	97.436	78	2	0	1	78	1	78	2.80e-47	156
MS.gene006731.t1	MTR_5g033960	97.436	78	2	0	77	154	1	78	2.80e-47	156
MS.gene006731.t1	MTR_5g033960	97.436	78	2	0	153	230	1	78	2.80e-47	156
MS.gene006731.t1	MTR_5g033960	100.000	76	0	0	229	304	1	76	3.29e-47	156
MS.gene006731.t1	MTR_1g046640	71.053	76	22	0	1	76	240	315	8.46e-27	107
MS.gene006731.t1	MTR_1g046640	71.053	76	22	0	77	152	240	315	8.46e-27	107
MS.gene006731.t1	MTR_1g046640	71.053	76	22	0	153	228	240	315	8.46e-27	107
MS.gene006731.t1	MTR_1g046640	71.053	76	22	0	229	304	240	315	8.46e-27	107
MS.gene006731.t1	MTR_5g076660	63.855	83	30	0	67	149	256	338	4.62e-26	105
MS.gene006731.t1	MTR_5g076660	63.855	83	30	0	143	225	256	338	4.62e-26	105
MS.gene006731.t1	MTR_5g076660	63.855	83	30	0	219	301	256	338	4.62e-26	105
MS.gene006731.t1	MTR_5g076660	69.863	73	22	0	1	73	266	338	9.03e-26	105
MS.gene006731.t1	MTR_5g076810	68.831	77	23	1	1	76	194	270	5.11e-26	104
MS.gene006731.t1	MTR_5g076810	68.831	77	23	1	77	152	194	270	5.11e-26	104
MS.gene006731.t1	MTR_5g076810	68.831	77	23	1	153	228	194	270	5.11e-26	104
MS.gene006731.t1	MTR_5g076810	68.831	77	23	1	229	304	194	270	5.11e-26	104
MS.gene006731.t1	MTR_5g061310	60.000	75	30	0	1	75	2	76	1.53e-23	92.0
MS.gene006731.t1	MTR_5g061310	60.000	75	30	0	77	151	2	76	1.53e-23	92.0
MS.gene006731.t1	MTR_5g061310	60.000	75	30	0	153	227	2	76	1.53e-23	92.0
MS.gene006731.t1	MTR_5g061310	60.000	75	30	0	229	303	2	76	1.53e-23	92.0
MS.gene006731.t1	MTR_5g067400	68.421	76	24	0	1	76	241	316	2.23e-23	98.2
MS.gene006731.t1	MTR_5g067400	68.421	76	24	0	77	152	241	316	2.23e-23	98.2
MS.gene006731.t1	MTR_5g067400	68.421	76	24	0	153	228	241	316	2.23e-23	98.2
MS.gene006731.t1	MTR_5g067400	68.421	76	24	0	229	304	241	316	2.23e-23	98.2
MS.gene006731.t1	MTR_5g076370	59.036	83	34	0	67	149	257	339	4.65e-22	94.7
MS.gene006731.t1	MTR_5g076370	59.036	83	34	0	143	225	257	339	4.65e-22	94.7
MS.gene006731.t1	MTR_5g076370	59.036	83	34	0	219	301	257	339	4.65e-22	94.7
MS.gene006731.t1	MTR_5g076370	64.384	73	26	0	1	73	267	339	8.54e-22	94.0
MS.gene006731.t1	MTR_5g076505	61.333	75	29	0	1	75	240	314	6.70e-21	91.3
MS.gene006731.t1	MTR_5g076505	61.333	75	29	0	77	151	240	314	6.70e-21	91.3
MS.gene006731.t1	MTR_5g076505	61.333	75	29	0	153	227	240	314	6.70e-21	91.3
MS.gene006731.t1	MTR_5g076505	61.333	75	29	0	229	303	240	314	6.70e-21	91.3
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	1	76	171	246	9.83e-21	89.4
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	77	152	171	246	9.83e-21	89.4
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	153	228	171	246	9.83e-21	89.4
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	229	304	171	246	9.83e-21	89.4
MS.gene006731.t1	MTR_2g038430	61.333	75	29	0	1	75	268	342	1.19e-20	90.9
MS.gene006731.t1	MTR_2g038430	61.333	75	29	0	77	151	268	342	1.19e-20	90.9
MS.gene006731.t1	MTR_2g038430	61.333	75	29	0	153	227	268	342	1.19e-20	90.9
MS.gene006731.t1	MTR_2g038430	61.333	75	29	0	229	303	268	342	1.19e-20	90.9
MS.gene006731.t1	MTR_5g076720	65.333	75	26	0	1	75	315	389	1.21e-20	91.7
MS.gene006731.t1	MTR_5g076720	65.333	75	26	0	77	151	315	389	1.21e-20	91.7
MS.gene006731.t1	MTR_5g076720	65.333	75	26	0	153	227	315	389	1.21e-20	91.7
MS.gene006731.t1	MTR_5g076720	65.333	75	26	0	229	303	315	389	1.21e-20	91.7
MS.gene006731.t1	MTR_5g076740	56.250	80	34	1	227	305	84	163	1.65e-20	86.7
MS.gene006731.t1	MTR_5g076740	57.692	78	32	1	75	151	84	161	3.53e-20	85.9
MS.gene006731.t1	MTR_5g076740	57.692	78	32	1	151	227	84	161	3.53e-20	85.9
MS.gene006731.t1	MTR_5g076740	59.211	76	30	1	1	75	86	161	4.20e-20	85.9
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	1.80e-20	90.1
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	77	152	240	315	1.80e-20	90.1
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	153	228	240	315	1.80e-20	90.1
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	229	304	240	315	1.80e-20	90.1
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	2.40e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	77	152	240	315	2.40e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	153	228	240	315	2.40e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	229	304	240	315	2.40e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	1	76	271	346	3.43e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	77	152	271	346	3.43e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	153	228	271	346	3.43e-20	89.7
MS.gene006731.t1	MTR_1g046650	57.895	76	32	0	229	304	271	346	3.43e-20	89.7
MS.gene006731.t1	MTR_2g038420	60.000	75	30	0	1	75	260	334	6.05e-20	89.0
MS.gene006731.t1	MTR_2g038420	60.000	75	30	0	77	151	260	334	6.05e-20	89.0
MS.gene006731.t1	MTR_2g038420	60.000	75	30	0	153	227	260	334	6.05e-20	89.0
MS.gene006731.t1	MTR_2g038420	60.000	75	30	0	229	303	260	334	6.05e-20	89.0
MS.gene006731.t1	MTR_4g080783	53.409	88	11	1	44	101	7	94	8.54e-20	82.8
MS.gene006731.t1	MTR_4g080783	53.409	88	11	1	120	177	7	94	8.54e-20	82.8
MS.gene006731.t1	MTR_4g080783	53.409	88	11	1	196	253	7	94	8.54e-20	82.8
MS.gene006731.t1	MTR_7g094390	54.118	85	39	0	67	151	392	476	4.52e-19	87.4
MS.gene006731.t1	MTR_7g094390	54.118	85	39	0	143	227	392	476	4.52e-19	87.4
MS.gene006731.t1	MTR_7g094390	54.118	85	39	0	219	303	392	476	4.52e-19	87.4
MS.gene006731.t1	MTR_7g094390	58.667	75	31	0	1	75	402	476	6.79e-19	87.0
MS.gene006731.t1	MTR_5g076520	56.410	78	33	1	229	305	244	321	4.33e-18	83.6
MS.gene006731.t1	MTR_5g076520	57.333	75	31	1	1	74	244	318	8.33e-18	82.8
MS.gene006731.t1	MTR_5g076520	57.333	75	31	1	77	150	244	318	8.33e-18	82.8
MS.gene006731.t1	MTR_5g076520	57.333	75	31	1	153	226	244	318	8.33e-18	82.8
MS.gene006731.t1	MTR_7g024290	60.526	76	29	1	1	75	241	316	5.40e-17	80.1
MS.gene006731.t1	MTR_7g024290	60.526	76	29	1	77	151	241	316	5.40e-17	80.1
MS.gene006731.t1	MTR_7g024290	60.526	76	29	1	153	227	241	316	5.40e-17	80.1
MS.gene006731.t1	MTR_7g024290	60.526	76	29	1	229	303	241	316	5.40e-17	80.1
MS.gene006731.t1	MTR_5g061290	53.333	75	35	0	1	75	252	326	3.06e-16	78.2
MS.gene006731.t1	MTR_5g061290	53.333	75	35	0	77	151	252	326	3.06e-16	78.2
MS.gene006731.t1	MTR_5g061290	53.333	75	35	0	153	227	252	326	3.06e-16	78.2
MS.gene006731.t1	MTR_5g061290	53.333	75	35	0	229	303	252	326	3.06e-16	78.2
MS.gene006731.t1	MTR_4g009980	55.224	67	30	0	9	75	4	70	4.38e-16	72.0
MS.gene006731.t1	MTR_4g009980	55.224	67	30	0	85	151	4	70	4.38e-16	72.0
MS.gene006731.t1	MTR_4g009980	55.224	67	30	0	161	227	4	70	4.38e-16	72.0
MS.gene006731.t1	MTR_4g009980	55.224	67	30	0	237	303	4	70	4.38e-16	72.0
MS.gene006731.t1	MTR_8g027610	31.953	169	103	6	65	226	26	189	6.10e-16	78.6
MS.gene006731.t1	MTR_8g027610	31.953	169	103	6	141	302	26	189	6.10e-16	78.6
MS.gene006731.t1	MTR_8g027610	33.974	156	91	6	3	150	38	189	2.01e-15	77.0
MS.gene006731.t1	MTR_3g091400	32.484	157	102	4	148	301	22	177	1.86e-15	77.0
MS.gene006731.t1	MTR_3g091400	33.562	146	94	3	7	149	32	177	2.79e-15	76.6
MS.gene006731.t1	MTR_2g088760	26.522	230	144	5	15	221	14	241	4.68e-15	73.9
MS.gene006731.t1	MTR_2g088760	31.724	145	86	4	167	300	14	156	4.62e-11	62.4
MS.gene006731.t1	MTR_7g117395	32.278	158	100	5	1	152	37	193	2.43e-14	73.6
MS.gene006731.t1	MTR_7g117395	32.278	158	100	5	77	228	37	193	2.43e-14	73.6
MS.gene006731.t1	MTR_7g117395	32.278	158	100	5	153	304	37	193	2.43e-14	73.6
MS.gene006731.t1	MTR_5g076760	58.621	58	24	0	10	67	4	61	7.37e-14	66.2
MS.gene006731.t1	MTR_5g076760	58.621	58	24	0	86	143	4	61	7.37e-14	66.2
MS.gene006731.t1	MTR_5g076760	58.621	58	24	0	162	219	4	61	7.37e-14	66.2
MS.gene006731.t1	MTR_5g076760	58.621	58	24	0	238	295	4	61	7.37e-14	66.2
MS.gene006731.t1	MTR_5g076780	56.452	62	27	0	13	74	2	63	1.00e-13	65.5
MS.gene006731.t1	MTR_5g076780	56.452	62	27	0	89	150	2	63	1.00e-13	65.5
MS.gene006731.t1	MTR_5g076780	56.452	62	27	0	165	226	2	63	1.00e-13	65.5
MS.gene006731.t1	MTR_5g076780	56.452	62	27	0	241	302	2	63	1.00e-13	65.5
MS.gene006731.t1	MTR_5g076350	50.000	74	36	1	1	73	8	81	6.40e-13	63.9
MS.gene006731.t1	MTR_5g076350	50.000	74	36	1	77	149	8	81	6.40e-13	63.9
MS.gene006731.t1	MTR_5g076350	50.000	74	36	1	153	225	8	81	6.40e-13	63.9
MS.gene006731.t1	MTR_5g076350	50.000	74	36	1	229	301	8	81	6.40e-13	63.9
MS.gene006731.t1	MTR_5g076340	52.000	75	34	2	1	73	9	83	3.42e-12	62.0
MS.gene006731.t1	MTR_5g076340	52.000	75	34	2	77	149	9	83	3.42e-12	62.0
MS.gene006731.t1	MTR_5g076340	52.000	75	34	2	153	225	9	83	3.42e-12	62.0
MS.gene006731.t1	MTR_5g076340	52.000	75	34	2	229	301	9	83	3.42e-12	62.0
MS.gene006731.t1	MTR_5g009120	24.405	168	121	3	62	224	16	182	8.83e-11	62.8
MS.gene006731.t1	MTR_5g009120	24.405	168	121	3	138	300	16	182	8.83e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene006731.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT4G05320	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene006731.t1	AT4G02890	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene006731.t1	AT4G02890	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene006731.t1	AT5G20620	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene006731.t1	AT5G20620	100.000	304	0	0	1	304	77	380	0.0	602
MS.gene006731.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene006731.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene006731.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene006731.t1	AT5G20620	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene006731.t1	AT1G65350	93.711	318	5	2	1	304	1	317	0.0	570
MS.gene006731.t1	AT5G37640	90.492	305	28	1	1	304	3	307	0.0	538
MS.gene006731.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene006731.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene006731.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene006731.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene006731.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene006731.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene006731.t1	AT4G02890	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene006731.t1	AT4G02890	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene006731.t1	AT4G02890	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene006731.t1	AT4G02890	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene006731.t1	AT3G09790	78.481	316	56	3	1	304	3	318	4.75e-162	465
MS.gene006731.t1	AT3G09790	72.347	311	73	3	1	302	319	625	1.21e-140	411
MS.gene006731.t1	AT3G09790	70.126	318	77	4	1	304	238	551	8.75e-137	401
MS.gene006731.t1	AT3G09790	78.481	316	56	3	1	304	3	318	4.75e-162	465
MS.gene006731.t1	AT3G09790	72.347	311	73	3	1	302	319	625	1.21e-140	411
MS.gene006731.t1	AT3G09790	70.126	318	77	4	1	304	238	551	8.75e-137	401
MS.gene006731.t1	AT1G55060	94.298	228	13	0	1	228	1	228	1.65e-153	429
MS.gene006731.t1	AT1G55060	94.298	228	13	0	77	304	1	228	1.65e-153	429
MS.gene006731.t1	AT4G05050	100.000	153	0	0	153	305	1	153	4.82e-106	306
MS.gene006731.t1	AT4G05050	99.346	153	1	0	1	153	1	153	5.11e-105	303
MS.gene006731.t1	AT4G05050	99.346	153	1	0	77	229	1	153	5.11e-105	303
MS.gene006731.t1	AT4G05320	100.000	153	0	0	153	305	1	153	4.82e-106	306
MS.gene006731.t1	AT4G05320	99.346	153	1	0	1	153	1	153	5.11e-105	303
MS.gene006731.t1	AT4G05320	99.346	153	1	0	77	229	1	153	5.11e-105	303
MS.gene006731.t1	AT1G31340	81.046	153	29	0	153	305	1	153	9.52e-84	249
MS.gene006731.t1	AT1G31340	78.846	156	33	0	1	156	1	156	9.94e-83	246
MS.gene006731.t1	AT1G31340	78.846	156	33	0	77	232	1	156	9.94e-83	246
MS.gene006731.t1	AT2G35635	79.739	153	31	0	1	153	1	153	5.27e-82	244
MS.gene006731.t1	AT2G35635	79.739	153	31	0	77	229	1	153	5.27e-82	244
MS.gene006731.t1	AT2G35635	79.739	153	31	0	153	305	1	153	7.38e-82	244
MS.gene006731.t1	AT3G52590	98.701	77	1	0	1	77	1	77	8.87e-48	156
MS.gene006731.t1	AT3G52590	98.701	77	1	0	77	153	1	77	8.87e-48	156
MS.gene006731.t1	AT3G52590	98.701	77	1	0	153	229	1	77	8.87e-48	156
MS.gene006731.t1	AT3G52590	98.701	77	1	0	229	305	1	77	1.10e-47	156
MS.gene006731.t1	AT2G36170	98.701	77	1	0	1	77	1	77	8.87e-48	156
MS.gene006731.t1	AT2G36170	98.701	77	1	0	77	153	1	77	8.87e-48	156
MS.gene006731.t1	AT2G36170	98.701	77	1	0	153	229	1	77	8.87e-48	156
MS.gene006731.t1	AT2G36170	98.701	77	1	0	229	305	1	77	1.10e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	1	78	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	77	154	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	153	230	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	100.000	76	0	0	229	304	1	76	3.33e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	1	78	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	77	154	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	97.436	78	2	0	153	230	1	78	2.86e-47	156
MS.gene006731.t1	AT2G47110	100.000	76	0	0	229	304	1	76	3.33e-47	156
MS.gene006731.t1	AT3G62250	97.436	78	2	0	1	78	1	78	3.09e-47	156
MS.gene006731.t1	AT3G62250	97.436	78	2	0	77	154	1	78	3.09e-47	156
MS.gene006731.t1	AT3G62250	97.436	78	2	0	153	230	1	78	3.09e-47	156
MS.gene006731.t1	AT3G62250	100.000	76	0	0	229	304	1	76	3.67e-47	156
MS.gene006731.t1	AT1G23410	100.000	76	0	0	1	76	1	76	6.17e-47	155
MS.gene006731.t1	AT1G23410	100.000	76	0	0	77	152	1	76	6.17e-47	155
MS.gene006731.t1	AT1G23410	100.000	76	0	0	153	228	1	76	6.17e-47	155
MS.gene006731.t1	AT1G23410	100.000	76	0	0	229	304	1	76	6.17e-47	155
MS.gene006731.t1	AT1G53930	49.091	165	54	7	8	149	1	158	9.07e-34	121
MS.gene006731.t1	AT1G53930	49.091	165	54	7	84	225	1	158	9.07e-34	121
MS.gene006731.t1	AT1G53930	49.091	165	54	7	160	301	1	158	9.07e-34	121
MS.gene006731.t1	AT1G53930	75.342	73	18	0	1	73	86	158	7.14e-31	114
MS.gene006731.t1	AT1G53950	41.463	164	55	3	71	227	14	143	1.76e-26	102
MS.gene006731.t1	AT1G53950	41.463	164	55	3	147	303	14	143	1.76e-26	102
MS.gene006731.t1	AT1G53950	43.038	158	49	3	1	151	20	143	3.24e-26	101
MS.gene006731.t1	AT1G11980	54.545	77	35	0	1	77	1	77	1.43e-22	89.7
MS.gene006731.t1	AT1G11980	54.545	77	35	0	77	153	1	77	1.43e-22	89.7
MS.gene006731.t1	AT1G11980	54.545	77	35	0	153	229	1	77	1.43e-22	89.7
MS.gene006731.t1	AT1G11980	54.545	77	35	0	229	305	1	77	1.50e-22	89.7
MS.gene006731.t1	AT2G46500	35.862	145	90	2	7	148	40	184	3.46e-19	87.8
MS.gene006731.t1	AT2G46500	35.862	145	90	2	159	300	40	184	3.46e-19	87.8
MS.gene006731.t1	AT2G46500	35.862	145	90	2	7	148	40	184	4.90e-19	87.8
MS.gene006731.t1	AT2G46500	35.862	145	90	2	159	300	40	184	4.90e-19	87.8
MS.gene006731.t1	AT2G46500	35.862	145	90	2	7	148	40	184	4.90e-19	87.8
MS.gene006731.t1	AT2G46500	35.862	145	90	2	159	300	40	184	4.90e-19	87.8
MS.gene006731.t1	AT1G53945	38.356	146	53	3	1	143	1	112	2.18e-17	77.0
MS.gene006731.t1	AT1G53945	38.356	146	53	3	77	219	1	112	2.18e-17	77.0
MS.gene006731.t1	AT1G53945	38.356	146	53	3	153	295	1	112	2.18e-17	77.0
MS.gene006731.t1	AT5G24240	33.793	145	91	3	7	147	38	181	1.21e-13	71.6
MS.gene006731.t1	AT5G24240	33.793	145	91	3	83	223	38	181	1.21e-13	71.6
MS.gene006731.t1	AT5G24240	33.793	145	91	3	159	299	38	181	1.21e-13	71.6
MS.gene006731.t1	AT5G24240	33.793	145	91	3	7	147	38	181	1.21e-13	71.6
MS.gene006731.t1	AT5G24240	33.793	145	91	3	83	223	38	181	1.21e-13	71.6
MS.gene006731.t1	AT5G24240	33.793	145	91	3	159	299	38	181	1.21e-13	71.6

Find 92 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCATCCTCCAATTGCTTTC+CGG	0.228225	4.1:-25930338	None:intergenic
ACCCTCTTTGTCCTGGATCT+TGG	0.274270	4.1:-25930056	None:intergenic
AAAATAAGCCTCTGCTGATC+TGG	0.304914	4.1:-25930541	None:intergenic
ACCCTCTTTGTCCTGAATCT+TGG	0.309404	4.1:-25929828	None:intergenic
ATATTTGTGAAGACGCTTAC+TGG	0.318290	4.1:+25930436	MS.gene006731:CDS
CAGCAGAGGCTTATCTTTGC+AGG	0.323151	4.1:+25930091	MS.gene006731:CDS
CAGCAGAGGCTTATCTTTGC+TGG	0.346608	4.1:+25929863	MS.gene006731:CDS
AATGCAAAGTAGATTCCTTC+TGG	0.349783	4.1:-25930384	None:intergenic
TAATGTCAAGGCCAAGATTC+AGG	0.350237	4.1:+25929817	MS.gene006731:CDS
GAAGGAATCTACTTTGCATT+TGG	0.357379	4.1:+25930387	MS.gene006731:CDS
AATGAAGGGTAGATTCCTTC+TGG	0.382623	4.1:-25929928	None:intergenic
GACGGGAAAGACTATTACTT+TGG	0.390154	4.1:+25930225	MS.gene006731:CDS
AATGAAGGGTGGATTCCTTC+TGG	0.393830	4.1:-25930156	None:intergenic
GAAGGAATCCACCCTTCATT+TGG	0.394555	4.1:+25930159	MS.gene006731:CDS
TACTGGGAAGACTATTACCT+TGG	0.397132	4.1:+25930453	MS.gene006731:CDS
AAGATAAGCCTCTGCTGATC+AGG	0.398269	4.1:-25929857	None:intergenic
AAGATAAGCCTCTGCTGATC+AGG	0.404708	4.1:-25930085	None:intergenic
GAAGGAATCTACCCTTCATT+TGG	0.416312	4.1:+25929931	MS.gene006731:CDS
GTGGGATACCCTCTTTGTCC+TGG	0.442832	4.1:-25930063	None:intergenic
AAAATTAGTCTCTGCTGGTC+TGG	0.443739	4.1:-25930313	None:intergenic
TCAATCTAAGCACCAAATGA+AGG	0.460679	4.1:-25930171	None:intergenic
CTTGGCCTTGACATTATCAA+TGG	0.462747	4.1:-25930038	None:intergenic
AAATAAGCCTCTGCTGATCT+GGG	0.465164	4.1:-25930540	None:intergenic
TCAATCTAAGCACCAAATGA+AGG	0.467207	4.1:-25929943	None:intergenic
CACCCTAGAGGTTGAATCCT+CGG	0.468211	4.1:+25930012	MS.gene006731:CDS
CATTTGGTGCTTAGATTGAG+AGG	0.480984	4.1:+25929947	MS.gene006731:CDS
CATTTGGTGCTTAGATTGAG+AGG	0.480984	4.1:+25930175	MS.gene006731:CDS
CACCCTTGAGGTGGAATCAT+CGG	0.482660	4.1:+25929784	MS.gene006731:CDS
ATTGGAGGATGGTCGTACTT+TGG	0.488133	4.1:+25930348	MS.gene006731:CDS
TCTGGATGTTATAATCAGCT+AGG	0.489504	4.1:-25929910	None:intergenic
ATCTTTGTGAAAACATTGAC+TGG	0.491047	4.1:+25929752	MS.gene006731:CDS
AGCAGAGGCTTATCTTTGCT+GGG	0.491816	4.1:+25929864	MS.gene006731:CDS
GGGAAAGACTATTACTTTGG+AGG	0.502909	4.1:+25930228	MS.gene006731:CDS
TCTGGATGTTATAATCAGCT+AGG	0.505255	4.1:-25930138	None:intergenic
TGGGAAGACTATTACCTTGG+AGG	0.507917	4.1:+25930456	MS.gene006731:CDS
TAATGTCAAGGCCAAGATCC+AGG	0.518614	4.1:+25930045	MS.gene006731:CDS
AAAGACTATTACTTTGGAGG+TGG	0.523715	4.1:+25930231	MS.gene006731:CDS
TGATTCCACCTCAAGGGTGA+TGG	0.524625	4.1:-25929780	None:intergenic
ATATTCGTCAAGACTTTGAC+CGG	0.529492	4.1:+25929980	MS.gene006731:CDS
GCTGGCAAGCAGTTGGAGGA+TGG	0.535241	4.1:+25930565	MS.gene006731:CDS
TATTTGTGAAGACGCTTACT+GGG	0.538804	4.1:+25930437	MS.gene006731:CDS
GTTGGAGGATGGTCGTACTC+TGG	0.539382	4.1:+25930576	MS.gene006731:CDS
GCAGGGAAACAACTAGAAGA+TGG	0.551920	4.1:+25930109	MS.gene006731:CDS
TATCCGAGGATTCAACCTCT+AGG	0.556980	4.1:-25930015	None:intergenic
GCCGGAAAGCAATTGGAGGA+TGG	0.558534	4.1:+25930337	MS.gene006731:CDS
AGCAAAGATACAAGATAAGG+AGG	0.559260	4.1:+25930510	MS.gene006731:CDS
CTGGATGTTATAATCAGCTA+GGG	0.560371	4.1:-25929909	None:intergenic
GAAAGCAAAGATACAAGATA+AGG	0.565523	4.1:+25930507	MS.gene006731:CDS
ATCCGAGGATTCAACCTCTA+GGG	0.568186	4.1:-25930014	None:intergenic
AGCAGAGGCTTATCTTTGCA+GGG	0.572317	4.1:+25930092	MS.gene006731:CDS
CTTGTTCTTCGTCTCCGTGG+TGG	0.572507	4.1:+25930634	MS.gene006731:CDS
GAAGACTATTACCTTGGAGG+TGG	0.573223	4.1:+25930459	MS.gene006731:CDS
GCTGGGAAACAACTCGAGGA+TGG	0.573656	4.1:+25929881	MS.gene006731:CDS
GGATTCAACCTCTAGGGTGA+TGG	0.575072	4.1:-25930008	None:intergenic
ATAAGCCTCTGCTGATCAGG+TGG	0.575147	4.1:-25930082	None:intergenic
GACATTATCAATGGTATCCG+AGG	0.576477	4.1:-25930029	None:intergenic
GGAGACGAAGAACAAGATGC+AGG	0.577541	4.1:-25930627	None:intergenic
ATAAGCCTCTGCTGATCAGG+AGG	0.578405	4.1:-25929854	None:intergenic
ATCAGAGCTTTCCACCTCCA+AGG	0.582807	4.1:-25930470	None:intergenic
CAATCTAAGCACCAAATGAA+GGG	0.584307	4.1:-25929942	None:intergenic
ATTAGTCTCTGCTGGTCTGG+AGG	0.592481	4.1:-25930310	None:intergenic
CAATCTAAGCACCAAATGAA+GGG	0.592660	4.1:-25930170	None:intergenic
CTGGATGTTATAATCAGCTA+GGG	0.596159	4.1:-25930137	None:intergenic
TATCCGATGATTCCACCTCA+AGG	0.598701	4.1:-25929787	None:intergenic
CAAAACCATCACCCTTGAGG+TGG	0.600034	4.1:+25929775	MS.gene006731:CDS
CATCTTGTTCTTCGTCTCCG+TGG	0.603344	4.1:+25930631	MS.gene006731:CDS
ATAAGCCTCTGCTGATCTGG+GGG	0.604365	4.1:-25930538	None:intergenic
GGCCAAGATTCAGGACAAAG+AGG	0.609724	4.1:+25929826	MS.gene006731:CDS
AATAAGCCTCTGCTGATCTG+GGG	0.611344	4.1:-25930539	None:intergenic
GGCCAAGATCCAGGACAAAG+AGG	0.613915	4.1:+25930054	MS.gene006731:CDS
GCCAAGATTCAGGACAAAGA+GGG	0.620887	4.1:+25929827	MS.gene006731:CDS
GCCAAGATCCAGGACAAAGA+GGG	0.620887	4.1:+25930055	MS.gene006731:CDS
GCAAAGATACAAGATAAGGA+GGG	0.621833	4.1:+25930511	MS.gene006731:CDS
GGAAACAACTAGAAGATGGA+AGG	0.625020	4.1:+25930113	MS.gene006731:CDS
GGATACAATTGATAATGTCA+AGG	0.626130	4.1:+25929805	MS.gene006731:CDS
GGCTGATTATAATATCCAGA+AGG	0.627715	4.1:+25930369	MS.gene006731:CDS
TTGGTGCTTAGATTGAGAGG+TGG	0.628688	4.1:+25929950	MS.gene006731:CDS
TTGGTGCTTAGATTGAGAGG+TGG	0.628688	4.1:+25930178	MS.gene006731:CDS
ATCCGATGATTCCACCTCAA+GGG	0.629259	4.1:-25929786	None:intergenic
GGATACCATTGATAATGTCA+AGG	0.634466	4.1:+25930033	MS.gene006731:CDS
AGATACTATTGATAATGTCA+AGG	0.637037	4.1:+25930261	MS.gene006731:CDS
TGGCAAAACCATCACCCTTG+AGG	0.648872	4.1:+25929772	MS.gene006731:CDS
TCTAAGCACCAAATGAAGGG+TGG	0.651428	4.1:-25930167	None:intergenic
GTATCCCTCCTGATCAGCAG+AGG	0.654458	4.1:+25929849	MS.gene006731:CDS
CTTTGCTGGGAAACAACTCG+AGG	0.660573	4.1:+25929877	MS.gene006731:CDS
TAAGCCTCTGCTGATCAGGA+GGG	0.663439	4.1:-25929853	None:intergenic
GTATCCCACCTGATCAGCAG+AGG	0.664066	4.1:+25930077	MS.gene006731:CDS
GAGACGAAGAACAAGATGCA+GGG	0.665092	4.1:-25930626	None:intergenic
TAAGCCTCTGCTGATCAGGT+GGG	0.669417	4.1:-25930081	None:intergenic
AGCTGATTATAACATCCAGA+AGG	0.677696	4.1:+25929913	MS.gene006731:CDS
AGCTGATTATAACATCCAGA+AGG	0.677696	4.1:+25930141	MS.gene006731:CDS
AACACACTTAGAAGCCACCA+CGG	0.699059	4.1:-25930648	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGATACTATTGATAATGTCA+AGG	+	chr4.1:25930261-25930280	MS.gene006731:CDS	25.0%
	ATCTTTGTGAAAACATTGAC+TGG	+	chr4.1:25929752-25929771	MS.gene006731:CDS	30.0%
	GAAAGCAAAGATACAAGATA+AGG	+	chr4.1:25930507-25930526	MS.gene006731:CDS	30.0%
	GCAAAAATTCAGGATAAAGA+GGG	+	chr4.1:25930283-25930302	MS.gene006731:CDS	30.0%
	TAATGTCAAGGCAAAAATTC+AGG	+	chr4.1:25930273-25930292	MS.gene006731:CDS	30.0%
!	ATTTTTGTGAAGACTTTGAC+GGG	+	chr4.1:25930208-25930227	MS.gene006731:CDS	30.0%
!	GATTTTTGTGAAGACTTTGA+CGG	+	chr4.1:25930207-25930226	MS.gene006731:CDS	30.0%
!!	GGATACAATTGATAATGTCA+AGG	+	chr4.1:25929805-25929824	MS.gene006731:CDS	30.0%
	AATGCAAAGTAGATTCCTTC+TGG	-	chr4.1:25930387-25930406	None:intergenic	35.0%
	AGCAAAGATACAAGATAAGG+AGG	+	chr4.1:25930510-25930529	MS.gene006731:CDS	35.0%
	AGCTGATTATAACATCCAGA+AGG	+	chr4.1:25929913-25929932	MS.gene006731:CDS	35.0%
	ATATTCGTCAAGACTTTGAC+CGG	+	chr4.1:25929980-25929999	MS.gene006731:CDS	35.0%
	ATATTTGTGAAGACGCTTAC+TGG	+	chr4.1:25930436-25930455	MS.gene006731:CDS	35.0%
	CAATCTAAGCACCAAATGAA+GGG	-	chr4.1:25929945-25929964	None:intergenic	35.0%
	CTGGATGTTATAATCAGCTA+GGG	-	chr4.1:25929912-25929931	None:intergenic	35.0%
	GAAGGAATCTACTTTGCATT+TGG	+	chr4.1:25930387-25930406	MS.gene006731:CDS	35.0%
	GCAAAGATACAAGATAAGGA+GGG	+	chr4.1:25930511-25930530	MS.gene006731:CDS	35.0%
	GGCAAAAATTCAGGATAAAG+AGG	+	chr4.1:25930282-25930301	MS.gene006731:CDS	35.0%
	GGCTGATTATAATATCCAGA+AGG	+	chr4.1:25930369-25930388	MS.gene006731:CDS	35.0%
	TATTTGTGAAGACGCTTACT+GGG	+	chr4.1:25930437-25930456	MS.gene006731:CDS	35.0%
	TCAATCTAAGCACCAAATGA+AGG	-	chr4.1:25929946-25929965	None:intergenic	35.0%
	TCTGGATGTTATAATCAGCT+AGG	-	chr4.1:25929913-25929932	None:intergenic	35.0%
!	AAAGACTATTACTTTGGAGG+TGG	+	chr4.1:25930231-25930250	MS.gene006731:CDS	35.0%
!	AATTTTTGCCGGAAAGCAAT+TGG	+	chr4.1:25930330-25930349	MS.gene006731:CDS	35.0%
!!	GGATACCATTGATAATGTCA+AGG	+	chr4.1:25930033-25930052	MS.gene006731:CDS	35.0%
!!!	CTACTTTGCATTTGGTTTTG+AGG	+	chr4.1:25930395-25930414	MS.gene006731:CDS	35.0%
	AAAATAAGCCTCTGCTGATC+TGG	-	chr4.1:25930544-25930563	None:intergenic	40.0%
	AAATAAGCCTCTGCTGATCT+GGG	-	chr4.1:25930543-25930562	None:intergenic	40.0%
	AATGAAGGGTAGATTCCTTC+TGG	-	chr4.1:25929931-25929950	None:intergenic	40.0%
	GAAGGAATCTACCCTTCATT+TGG	+	chr4.1:25929931-25929950	MS.gene006731:CDS	40.0%
	GACATTATCAATGGTATCCG+AGG	-	chr4.1:25930032-25930051	None:intergenic	40.0%
	GACGGGAAAGACTATTACTT+TGG	+	chr4.1:25930225-25930244	MS.gene006731:CDS	40.0%
	GGAAACAACTAGAAGATGGA+AGG	+	chr4.1:25930113-25930132	MS.gene006731:CDS	40.0%
	GGGAAAGACTATTACTTTGG+AGG	+	chr4.1:25930228-25930247	MS.gene006731:CDS	40.0%
	TAATGTCAAGGCCAAGATTC+AGG	+	chr4.1:25929817-25929836	MS.gene006731:CDS	40.0%
	TACTGGGAAGACTATTACCT+TGG	+	chr4.1:25930453-25930472	MS.gene006731:CDS	40.0%
!	AAAATTAGTCTCTGCTGGTC+TGG	-	chr4.1:25930316-25930335	None:intergenic	40.0%
!	CAGCAGAGACTAATTTTTGC+CGG	+	chr4.1:25930319-25930338	MS.gene006731:CDS	40.0%
!!	CATTTGGTGCTTAGATTGAG+AGG	+	chr4.1:25929947-25929966	MS.gene006731:CDS	40.0%
!!	CTTGGCCTTGACATTATCAA+TGG	-	chr4.1:25929813-25929832	None:intergenic	40.0%
!!	TATTTTTGCTGGCAAGCAGT+TGG	+	chr4.1:25930558-25930577	MS.gene006731:CDS	40.0%
	AAGATAAGCCTCTGCTGATC+AGG	-	chr4.1:25929860-25929879	None:intergenic	45.0%
	AATAAGCCTCTGCTGATCTG+GGG	-	chr4.1:25930542-25930561	None:intergenic	45.0%
	ACCATCCTCCAATTGCTTTC+CGG	-	chr4.1:25930341-25930360	None:intergenic	45.0%
	ACCCTCTTTGTCCTGAATCT+TGG	-	chr4.1:25929831-25929850	None:intergenic	45.0%
	AGCAGAGGCTTATCTTTGCA+GGG	+	chr4.1:25930092-25930111	MS.gene006731:CDS	45.0%
	AGCAGAGGCTTATCTTTGCT+GGG	+	chr4.1:25929864-25929883	MS.gene006731:CDS	45.0%
	ATCCGAGGATTCAACCTCTA+GGG	-	chr4.1:25930017-25930036	None:intergenic	45.0%
	ATCCGATGATTCCACCTCAA+GGG	-	chr4.1:25929789-25929808	None:intergenic	45.0%
	ATTGGAGGATGGTCGTACTT+TGG	+	chr4.1:25930348-25930367	MS.gene006731:CDS	45.0%
	GAAGACTATTACCTTGGAGG+TGG	+	chr4.1:25930459-25930478	MS.gene006731:CDS	45.0%
	GAAGGAATCCACCCTTCATT+TGG	+	chr4.1:25930159-25930178	MS.gene006731:CDS	45.0%
	GAGACGAAGAACAAGATGCA+GGG	-	chr4.1:25930629-25930648	None:intergenic	45.0%
	GCAGGGAAACAACTAGAAGA+TGG	+	chr4.1:25930109-25930128	MS.gene006731:CDS	45.0%
	GCCAAGATTCAGGACAAAGA+GGG	+	chr4.1:25929827-25929846	MS.gene006731:CDS	45.0%
	TAATGTCAAGGCCAAGATCC+AGG	+	chr4.1:25930045-25930064	MS.gene006731:CDS	45.0%
	TATCCGAGGATTCAACCTCT+AGG	-	chr4.1:25930018-25930037	None:intergenic	45.0%
	TATCCGATGATTCCACCTCA+AGG	-	chr4.1:25929790-25929809	None:intergenic	45.0%
	TCTAAGCACCAAATGAAGGG+TGG	-	chr4.1:25929942-25929961	None:intergenic	45.0%
	TGGGAAGACTATTACCTTGG+AGG	+	chr4.1:25930456-25930475	MS.gene006731:CDS	45.0%
!	AATGAAGGGTGGATTCCTTC+TGG	-	chr4.1:25930159-25930178	None:intergenic	45.0%
!	CGGCAAAAATTAGTCTCTGC+TGG	-	chr4.1:25930321-25930340	None:intergenic	45.0%
!	TTGGTGCTTAGATTGAGAGG+TGG	+	chr4.1:25929950-25929969	MS.gene006731:CDS	45.0%
!	TTTTGCCGGAAAGCAATTGG+AGG	+	chr4.1:25930333-25930352	MS.gene006731:CDS	45.0%
!!!	CAGCAGAGGCTTATTTTTGC+TGG	+	chr4.1:25930547-25930566	MS.gene006731:CDS	45.0%
!!!	CATTTGGTTTTGAGGCTTCG+TGG	+	chr4.1:25930403-25930422	MS.gene006731:CDS	45.0%
!!!	CTCTAGGGTGATGGTTTTTC+CGG	-	chr4.1:25930002-25930021	None:intergenic	45.0%
	ACCCTCTTTGTCCTGGATCT+TGG	-	chr4.1:25930059-25930078	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCAGG+AGG	-	chr4.1:25929857-25929876	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCAGG+TGG	-	chr4.1:25929857-25929876	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCTGG+GGG	-	chr4.1:25930541-25930560	None:intergenic	50.0%
	ATCAGAGCTTTCCACCTCCA+AGG	-	chr4.1:25930473-25930492	None:intergenic	50.0%
	CAAAACCATCACCCTTGAGG+TGG	+	chr4.1:25929775-25929794	MS.gene006731:CDS	50.0%
	CACCCTAGAGGTTGAATCCT+CGG	+	chr4.1:25930012-25930031	MS.gene006731:CDS	50.0%
	CACCCTTGAGGTGGAATCAT+CGG	+	chr4.1:25929784-25929803	MS.gene006731:CDS	50.0%
	CAGCAGAGGCTTATCTTTGC+AGG	+	chr4.1:25929863-25929882	MS.gene006731:CDS	50.0%
	CAGCAGAGGCTTATCTTTGC+TGG	+	chr4.1:25929863-25929882	MS.gene006731:CDS	50.0%
	CATCTTGTTCTTCGTCTCCG+TGG	+	chr4.1:25930631-25930650	MS.gene006731:CDS	50.0%
	CGGAAAAACCATCACCCTAG+AGG	+	chr4.1:25930000-25930019	MS.gene006731:CDS	50.0%
	CTTTGCTGGGAAACAACTCG+AGG	+	chr4.1:25929877-25929896	MS.gene006731:CDS	50.0%
	GCCAAGATCCAGGACAAAGA+GGG	+	chr4.1:25930055-25930074	MS.gene006731:CDS	50.0%
	GGAGACGAAGAACAAGATGC+AGG	-	chr4.1:25930630-25930649	None:intergenic	50.0%
	GGCCAAGATTCAGGACAAAG+AGG	+	chr4.1:25929826-25929845	MS.gene006731:CDS	50.0%
	TAAGCCTCTGCTGATCAGGA+GGG	-	chr4.1:25929856-25929875	None:intergenic	50.0%
	TAAGCCTCTGCTGATCAGGT+GGG	-	chr4.1:25930084-25930103	None:intergenic	50.0%
	TGATTCCACCTCAAGGGTGA+TGG	-	chr4.1:25929783-25929802	None:intergenic	50.0%
	TGGCAAAACCATCACCCTTG+AGG	+	chr4.1:25929772-25929791	MS.gene006731:CDS	50.0%
!	ATTAGTCTCTGCTGGTCTGG+AGG	-	chr4.1:25930313-25930332	None:intergenic	50.0%
!	TTTTGCTGGCAAGCAGTTGG+AGG	+	chr4.1:25930561-25930580	MS.gene006731:CDS	50.0%
!!	GGATTCAACCTCTAGGGTGA+TGG	-	chr4.1:25930011-25930030	None:intergenic	50.0%
!!!	TTGGTTTTGAGGCTTCGTGG+TGG	+	chr4.1:25930406-25930425	MS.gene006731:CDS	50.0%
	CTTGTTCTTCGTCTCCGTGG+TGG	+	chr4.1:25930634-25930653	MS.gene006731:CDS	55.0%
	GCCGGAAAGCAATTGGAGGA+TGG	+	chr4.1:25930337-25930356	MS.gene006731:CDS	55.0%
	GCTGGGAAACAACTCGAGGA+TGG	+	chr4.1:25929881-25929900	MS.gene006731:CDS	55.0%
	GGCCAAGATCCAGGACAAAG+AGG	+	chr4.1:25930054-25930073	MS.gene006731:CDS	55.0%
	GTATCCCACCTGATCAGCAG+AGG	+	chr4.1:25930077-25930096	MS.gene006731:CDS	55.0%
	GTATCCCTCCTGATCAGCAG+AGG	+	chr4.1:25929849-25929868	MS.gene006731:CDS	55.0%
	GTATTCCCCCAGATCAGCAG+AGG	+	chr4.1:25930533-25930552	MS.gene006731:CDS	55.0%
	GTGGGATACCCTCTTTGTCC+TGG	-	chr4.1:25930066-25930085	None:intergenic	55.0%
	GTTGGAGGATGGTCGTACTC+TGG	+	chr4.1:25930576-25930595	MS.gene006731:CDS	55.0%
	GCTGGCAAGCAGTTGGAGGA+TGG	+	chr4.1:25930565-25930584	MS.gene006731:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	25929746	25930663	25929746	ID=MS.gene006731
chr4.1	mRNA	25929746	25930663	25929746	ID=MS.gene006731.t1;Parent=MS.gene006731
chr4.1	exon	25929746	25930663	25929746	ID=MS.gene006731.t1.exon1;Parent=MS.gene006731.t1
chr4.1	CDS	25929746	25930663	25929746	ID=cds.MS.gene006731.t1;Parent=MS.gene006731.t1

Gene Sequence

>MS.gene006731

ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATCACCCTTGAGGTGGAATCATCGGATACAATTGATAATGTCAAGGCCAAGATTCAGGACAAAGAGGGTATCCCTCCTGATCAGCAGAGGCTTATCTTTGCTGGGAAACAACTCGAGGATGGAAGAACCCTAGCTGATTATAACATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATATTCGTCAAGACTTTGACCGGAAAAACCATCACCCTAGAGGTTGAATCCTCGGATACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCACCTGATCAGCAGAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATTTTTGTGAAGACTTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGTTCAGATACTATTGATAATGTCAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCAGCAGAGACTAATTTTTGCCGGAAAGCAATTGGAGGATGGTCGTACTTTGGCTGATTATAATATCCAGAAGGAATCTACTTTGCATTTGGTTTTGAGGCTTCGTGGTGGCATGCAAATATTTGTGAAGACGCTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCTGATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAGCAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAATATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGTCTCCGTGGTGGCTTCTAA

Protein sequence

>MS.gene006731.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF