AlfalfaGEDB | MS.gene045436

M. sativa cultivar XinJiangDaYe / MS.gene045436

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00240.26 PF10790.12

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045436.t1	RHN39336.1	100	305	0	0	1	305	232	536	3.80E-164	587.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045436.t1	P0CG85	100.0	305	0	0	1	305	153	457	9.1e-167	587.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045436.t1	M5WG80	100.0	305	0	0	1	305	1	305	2.7e-164	587.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene045436	MS.gene08695	PPI
MS.gene011610	MS.gene045436	PPI
MS.gene045436	MS.gene009802	PPI
MS.gene20814	MS.gene045436	PPI
MS.gene045436	MS.gene73491	PPI
MS.gene08694	MS.gene045436	PPI
MS.gene86222	MS.gene045436	PPI
MS.gene045436	MS.gene56987	PPI
MS.gene011568	MS.gene045436	PPI
MS.gene072037	MS.gene045436	PPI
MS.gene08994	MS.gene045436	PPI
MS.gene065539	MS.gene045436	PPI
MS.gene44289	MS.gene045436	PPI
MS.gene045436	MS.gene97484	PPI
MS.gene63795	MS.gene045436	PPI
MS.gene007678	MS.gene045436	PPI
MS.gene045055	MS.gene045436	PPI
MS.gene045436	MS.gene30401	PPI
MS.gene02587	MS.gene045436	PPI
MS.gene045436	MS.gene027729	PPI
MS.gene54158	MS.gene045436	PPI
MS.gene00641	MS.gene045436	PPI
MS.gene78528	MS.gene045436	PPI
MS.gene045436	MS.gene09697	PPI
MS.gene029856	MS.gene045436	PPI
MS.gene26108	MS.gene045436	PPI
MS.gene047179	MS.gene045436	PPI
MS.gene070097	MS.gene045436	PPI
MS.gene002068	MS.gene045436	PPI
MS.gene022269	MS.gene045436	PPI
MS.gene065547	MS.gene045436	PPI
MS.gene39380	MS.gene045436	PPI
MS.gene73500	MS.gene045436	PPI
MS.gene045436	MS.gene08756	PPI
MS.gene61248	MS.gene045436	PPI
MS.gene06688	MS.gene045436	PPI
MS.gene09251	MS.gene045436	PPI
MS.gene85935	MS.gene045436	PPI
MS.gene54156	MS.gene045436	PPI
MS.gene97486	MS.gene045436	PPI
MS.gene71988	MS.gene045436	PPI
MS.gene54199	MS.gene045436	PPI
MS.gene029829	MS.gene045436	PPI
MS.gene72347	MS.gene045436	PPI
MS.gene045436	MS.gene009804	PPI
MS.gene83571	MS.gene045436	PPI
MS.gene29165	MS.gene045436	PPI
MS.gene074383	MS.gene045436	PPI
MS.gene28784	MS.gene045436	PPI
MS.gene015360	MS.gene045436	PPI
MS.gene071146	MS.gene045436	PPI
MS.gene045436	MS.gene005556	PPI
MS.gene045436	MS.gene50207	PPI
MS.gene033685	MS.gene045436	PPI
MS.gene72846	MS.gene045436	PPI
MS.gene07025	MS.gene045436	PPI
MS.gene89169	MS.gene045436	PPI
MS.gene072722	MS.gene045436	PPI
MS.gene001116	MS.gene045436	PPI
MS.gene86974	MS.gene045436	PPI
MS.gene022937	MS.gene045436	PPI
MS.gene045436	MS.gene20769	PPI
MS.gene045436	MS.gene73784	PPI
MS.gene033210	MS.gene045436	PPI
MS.gene003415	MS.gene045436	PPI
MS.gene057124	MS.gene045436	PPI
MS.gene045436	MS.gene050131	PPI
MS.gene061817	MS.gene045436	PPI
MS.gene045436	MS.gene50205	PPI
MS.gene46385	MS.gene045436	PPI
MS.gene022662	MS.gene045436	PPI
MS.gene071145	MS.gene045436	PPI
MS.gene052262	MS.gene045436	PPI
MS.gene067895	MS.gene045436	PPI
MS.gene013805	MS.gene045436	PPI
MS.gene028061	MS.gene045436	PPI
MS.gene013571	MS.gene045436	PPI
MS.gene073684	MS.gene045436	PPI
MS.gene72384	MS.gene045436	PPI
MS.gene43279	MS.gene045436	PPI
MS.gene60331	MS.gene045436	PPI
MS.gene07247	MS.gene045436	PPI
MS.gene06897	MS.gene045436	PPI
MS.gene61288	MS.gene045436	PPI
MS.gene28966	MS.gene045436	PPI
MS.gene24606	MS.gene045436	PPI
MS.gene82967	MS.gene045436	PPI
MS.gene045436	MS.gene75011	PPI
MS.gene045436	MS.gene056537	PPI
MS.gene045436	MS.gene56989	PPI
MS.gene25922	MS.gene045436	PPI
MS.gene045436	MS.gene83422	PPI
MS.gene70595	MS.gene045436	PPI
MS.gene067451	MS.gene045436	PPI
MS.gene025687	MS.gene045436	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045436.t1	MTR_4g088495	100.000	305	0	0	1	305	533	837	0.0	605
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	229	533	0.0	602
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	305	609	0.0	602
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	381	685	0.0	602
MS.gene045436.t1	MTR_4g088495	99.672	305	1	0	1	305	457	761	0.0	602
MS.gene045436.t1	MTR_4g088495	99.344	305	2	0	1	305	1	305	0.0	598
MS.gene045436.t1	MTR_4g080797	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene045436.t1	MTR_4g080797	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_8g018230	100.000	305	0	0	1	305	229	533	0.0	604
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene045436.t1	MTR_8g018230	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	MTR_8g018230	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	MTR_8g018230	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene045436.t1	MTR_8g018230	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	77	381	0.0	603
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_4g091580	99.672	305	1	0	1	305	77	381	0.0	603
MS.gene045436.t1	MTR_4g091580	99.344	305	2	0	1	305	1	305	0.0	600
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	603
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	229	533	0.0	603
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	MTR_4g081010	99.672	305	1	0	1	305	153	457	0.0	602
MS.gene045436.t1	MTR_8g081020	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_8g081020	100.000	304	0	0	1	304	77	380	0.0	602
MS.gene045436.t1	MTR_4g091580	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	MTR_4g091580	99.344	305	2	0	1	305	229	533	0.0	600
MS.gene045436.t1	MTR_4g091580	99.016	305	3	0	1	305	77	381	0.0	597
MS.gene045436.t1	MTR_4g091580	99.016	305	3	0	1	305	153	457	0.0	597
MS.gene045436.t1	MTR_6g061930	94.426	305	2	1	1	305	1	290	0.0	561
MS.gene045436.t1	MTR_8g018230	88.525	305	0	1	1	305	1	270	0.0	517
MS.gene045436.t1	MTR_4g081010	100.000	244	0	0	1	244	1	244	3.82e-174	483
MS.gene045436.t1	MTR_4g081010	99.563	229	1	0	77	305	1	229	1.24e-162	454
MS.gene045436.t1	MTR_7g116360	100.000	229	0	0	77	305	1	229	7.75e-164	455
MS.gene045436.t1	MTR_7g116360	99.563	229	1	0	1	229	1	229	8.65e-163	452
MS.gene045436.t1	MTR_7g116360	100.000	229	0	0	77	305	49	277	1.61e-163	456
MS.gene045436.t1	MTR_7g116360	99.563	229	1	0	1	229	49	277	1.68e-162	453
MS.gene045436.t1	MTR_1g066390	100.000	228	0	0	1	228	1	228	1.07e-162	452
MS.gene045436.t1	MTR_1g066390	100.000	228	0	0	77	304	1	228	1.07e-162	452
MS.gene045436.t1	MTR_4g088485	93.450	229	0	1	77	305	1	214	6.52e-149	416
MS.gene045436.t1	MTR_4g088485	93.013	229	1	1	1	229	1	214	7.03e-148	414
MS.gene045436.t1	MTR_4g080920	89.035	228	25	0	1	228	1	228	8.36e-143	402
MS.gene045436.t1	MTR_4g080920	89.035	228	25	0	77	304	1	228	8.36e-143	402
MS.gene045436.t1	MTR_8g479250	67.949	312	53	6	1	300	1	277	1.80e-121	350
MS.gene045436.t1	MTR_8g479250	65.145	241	48	5	77	305	1	217	1.53e-83	254
MS.gene045436.t1	MTR_5g092700	80.263	152	30	0	1	152	1	152	3.01e-82	245
MS.gene045436.t1	MTR_5g092700	80.263	152	30	0	77	228	1	152	3.01e-82	245
MS.gene045436.t1	MTR_5g092700	80.263	152	30	0	153	304	1	152	3.01e-82	245
MS.gene045436.t1	MTR_4g073580	80.263	152	30	0	1	152	1	152	3.01e-82	245
MS.gene045436.t1	MTR_4g073580	80.263	152	30	0	77	228	1	152	3.01e-82	245
MS.gene045436.t1	MTR_4g073580	80.263	152	30	0	153	304	1	152	3.01e-82	245
MS.gene045436.t1	MTR_4g073580	67.033	182	30	1	1	152	1	182	1.22e-75	229
MS.gene045436.t1	MTR_4g073580	67.033	182	30	1	77	228	1	182	1.22e-75	229
MS.gene045436.t1	MTR_4g073580	67.033	182	30	1	153	304	1	182	1.22e-75	229
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	1	77	1	77	4.66e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	77	153	1	77	4.66e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	153	229	1	77	4.66e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	229	305	1	77	6.44e-48	157
MS.gene045436.t1	MTR_7g105080	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene045436.t1	MTR_7g105080	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene045436.t1	MTR_7g105080	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene045436.t1	MTR_7g105080	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene045436.t1	MTR_3g092130	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene045436.t1	MTR_1g059690	98.701	77	1	0	1	77	1	77	7.60e-48	157
MS.gene045436.t1	MTR_1g059690	98.701	77	1	0	77	153	1	77	7.60e-48	157
MS.gene045436.t1	MTR_1g059690	98.701	77	1	0	153	229	1	77	7.60e-48	157
MS.gene045436.t1	MTR_1g059690	98.701	77	1	0	229	305	1	77	1.02e-47	156
MS.gene045436.t1	MTR_8g088060	97.436	78	2	0	1	78	1	78	2.71e-47	156
MS.gene045436.t1	MTR_8g088060	97.436	78	2	0	77	154	1	78	2.71e-47	156
MS.gene045436.t1	MTR_8g088060	97.436	78	2	0	153	230	1	78	2.71e-47	156
MS.gene045436.t1	MTR_8g088060	100.000	76	0	0	229	304	1	76	3.19e-47	156
MS.gene045436.t1	MTR_5g033960	97.436	78	2	0	1	78	1	78	2.80e-47	156
MS.gene045436.t1	MTR_5g033960	97.436	78	2	0	77	154	1	78	2.80e-47	156
MS.gene045436.t1	MTR_5g033960	97.436	78	2	0	153	230	1	78	2.80e-47	156
MS.gene045436.t1	MTR_5g033960	100.000	76	0	0	229	304	1	76	3.29e-47	156
MS.gene045436.t1	MTR_1g046640	71.053	76	22	0	1	76	240	315	8.46e-27	107
MS.gene045436.t1	MTR_1g046640	71.053	76	22	0	77	152	240	315	8.46e-27	107
MS.gene045436.t1	MTR_1g046640	71.053	76	22	0	153	228	240	315	8.46e-27	107
MS.gene045436.t1	MTR_1g046640	71.053	76	22	0	229	304	240	315	8.46e-27	107
MS.gene045436.t1	MTR_5g076660	63.855	83	30	0	67	149	256	338	4.62e-26	105
MS.gene045436.t1	MTR_5g076660	63.855	83	30	0	143	225	256	338	4.62e-26	105
MS.gene045436.t1	MTR_5g076660	63.855	83	30	0	219	301	256	338	4.62e-26	105
MS.gene045436.t1	MTR_5g076660	69.863	73	22	0	1	73	266	338	9.03e-26	105
MS.gene045436.t1	MTR_5g076810	68.831	77	23	1	1	76	194	270	5.11e-26	104
MS.gene045436.t1	MTR_5g076810	68.831	77	23	1	77	152	194	270	5.11e-26	104
MS.gene045436.t1	MTR_5g076810	68.831	77	23	1	153	228	194	270	5.11e-26	104
MS.gene045436.t1	MTR_5g076810	68.831	77	23	1	229	304	194	270	5.11e-26	104
MS.gene045436.t1	MTR_5g061310	60.000	75	30	0	1	75	2	76	1.53e-23	92.0
MS.gene045436.t1	MTR_5g061310	60.000	75	30	0	77	151	2	76	1.53e-23	92.0
MS.gene045436.t1	MTR_5g061310	60.000	75	30	0	153	227	2	76	1.53e-23	92.0
MS.gene045436.t1	MTR_5g061310	60.000	75	30	0	229	303	2	76	1.53e-23	92.0
MS.gene045436.t1	MTR_5g067400	68.421	76	24	0	1	76	241	316	2.23e-23	98.2
MS.gene045436.t1	MTR_5g067400	68.421	76	24	0	77	152	241	316	2.23e-23	98.2
MS.gene045436.t1	MTR_5g067400	68.421	76	24	0	153	228	241	316	2.23e-23	98.2
MS.gene045436.t1	MTR_5g067400	68.421	76	24	0	229	304	241	316	2.23e-23	98.2
MS.gene045436.t1	MTR_5g076370	59.036	83	34	0	67	149	257	339	4.65e-22	94.7
MS.gene045436.t1	MTR_5g076370	59.036	83	34	0	143	225	257	339	4.65e-22	94.7
MS.gene045436.t1	MTR_5g076370	59.036	83	34	0	219	301	257	339	4.65e-22	94.7
MS.gene045436.t1	MTR_5g076370	64.384	73	26	0	1	73	267	339	8.54e-22	94.0
MS.gene045436.t1	MTR_5g076505	61.333	75	29	0	1	75	240	314	6.70e-21	91.3
MS.gene045436.t1	MTR_5g076505	61.333	75	29	0	77	151	240	314	6.70e-21	91.3
MS.gene045436.t1	MTR_5g076505	61.333	75	29	0	153	227	240	314	6.70e-21	91.3
MS.gene045436.t1	MTR_5g076505	61.333	75	29	0	229	303	240	314	6.70e-21	91.3
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	1	76	171	246	9.83e-21	89.4
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	77	152	171	246	9.83e-21	89.4
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	153	228	171	246	9.83e-21	89.4
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	229	304	171	246	9.83e-21	89.4
MS.gene045436.t1	MTR_2g038430	61.333	75	29	0	1	75	268	342	1.19e-20	90.9
MS.gene045436.t1	MTR_2g038430	61.333	75	29	0	77	151	268	342	1.19e-20	90.9
MS.gene045436.t1	MTR_2g038430	61.333	75	29	0	153	227	268	342	1.19e-20	90.9
MS.gene045436.t1	MTR_2g038430	61.333	75	29	0	229	303	268	342	1.19e-20	90.9
MS.gene045436.t1	MTR_5g076720	65.333	75	26	0	1	75	315	389	1.21e-20	91.7
MS.gene045436.t1	MTR_5g076720	65.333	75	26	0	77	151	315	389	1.21e-20	91.7
MS.gene045436.t1	MTR_5g076720	65.333	75	26	0	153	227	315	389	1.21e-20	91.7
MS.gene045436.t1	MTR_5g076720	65.333	75	26	0	229	303	315	389	1.21e-20	91.7
MS.gene045436.t1	MTR_5g076740	56.250	80	34	1	227	305	84	163	1.65e-20	86.7
MS.gene045436.t1	MTR_5g076740	57.692	78	32	1	75	151	84	161	3.53e-20	85.9
MS.gene045436.t1	MTR_5g076740	57.692	78	32	1	151	227	84	161	3.53e-20	85.9
MS.gene045436.t1	MTR_5g076740	59.211	76	30	1	1	75	86	161	4.20e-20	85.9
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	1.80e-20	90.1
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	77	152	240	315	1.80e-20	90.1
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	153	228	240	315	1.80e-20	90.1
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	229	304	240	315	1.80e-20	90.1
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	1	76	240	315	2.40e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	77	152	240	315	2.40e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	153	228	240	315	2.40e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	229	304	240	315	2.40e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	1	76	271	346	3.43e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	77	152	271	346	3.43e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	153	228	271	346	3.43e-20	89.7
MS.gene045436.t1	MTR_1g046650	57.895	76	32	0	229	304	271	346	3.43e-20	89.7
MS.gene045436.t1	MTR_2g038420	60.000	75	30	0	1	75	260	334	6.05e-20	89.0
MS.gene045436.t1	MTR_2g038420	60.000	75	30	0	77	151	260	334	6.05e-20	89.0
MS.gene045436.t1	MTR_2g038420	60.000	75	30	0	153	227	260	334	6.05e-20	89.0
MS.gene045436.t1	MTR_2g038420	60.000	75	30	0	229	303	260	334	6.05e-20	89.0
MS.gene045436.t1	MTR_4g080783	53.409	88	11	1	44	101	7	94	8.54e-20	82.8
MS.gene045436.t1	MTR_4g080783	53.409	88	11	1	120	177	7	94	8.54e-20	82.8
MS.gene045436.t1	MTR_4g080783	53.409	88	11	1	196	253	7	94	8.54e-20	82.8
MS.gene045436.t1	MTR_7g094390	54.118	85	39	0	67	151	392	476	4.52e-19	87.4
MS.gene045436.t1	MTR_7g094390	54.118	85	39	0	143	227	392	476	4.52e-19	87.4
MS.gene045436.t1	MTR_7g094390	54.118	85	39	0	219	303	392	476	4.52e-19	87.4
MS.gene045436.t1	MTR_7g094390	58.667	75	31	0	1	75	402	476	6.79e-19	87.0
MS.gene045436.t1	MTR_5g076520	56.410	78	33	1	229	305	244	321	4.33e-18	83.6
MS.gene045436.t1	MTR_5g076520	57.333	75	31	1	1	74	244	318	8.33e-18	82.8
MS.gene045436.t1	MTR_5g076520	57.333	75	31	1	77	150	244	318	8.33e-18	82.8
MS.gene045436.t1	MTR_5g076520	57.333	75	31	1	153	226	244	318	8.33e-18	82.8
MS.gene045436.t1	MTR_7g024290	60.526	76	29	1	1	75	241	316	5.40e-17	80.1
MS.gene045436.t1	MTR_7g024290	60.526	76	29	1	77	151	241	316	5.40e-17	80.1
MS.gene045436.t1	MTR_7g024290	60.526	76	29	1	153	227	241	316	5.40e-17	80.1
MS.gene045436.t1	MTR_7g024290	60.526	76	29	1	229	303	241	316	5.40e-17	80.1
MS.gene045436.t1	MTR_5g061290	53.333	75	35	0	1	75	252	326	3.06e-16	78.2
MS.gene045436.t1	MTR_5g061290	53.333	75	35	0	77	151	252	326	3.06e-16	78.2
MS.gene045436.t1	MTR_5g061290	53.333	75	35	0	153	227	252	326	3.06e-16	78.2
MS.gene045436.t1	MTR_5g061290	53.333	75	35	0	229	303	252	326	3.06e-16	78.2
MS.gene045436.t1	MTR_4g009980	55.224	67	30	0	9	75	4	70	4.38e-16	72.0
MS.gene045436.t1	MTR_4g009980	55.224	67	30	0	85	151	4	70	4.38e-16	72.0
MS.gene045436.t1	MTR_4g009980	55.224	67	30	0	161	227	4	70	4.38e-16	72.0
MS.gene045436.t1	MTR_4g009980	55.224	67	30	0	237	303	4	70	4.38e-16	72.0
MS.gene045436.t1	MTR_8g027610	31.953	169	103	6	65	226	26	189	6.10e-16	78.6
MS.gene045436.t1	MTR_8g027610	31.953	169	103	6	141	302	26	189	6.10e-16	78.6
MS.gene045436.t1	MTR_8g027610	33.974	156	91	6	3	150	38	189	2.01e-15	77.0
MS.gene045436.t1	MTR_3g091400	32.484	157	102	4	148	301	22	177	1.86e-15	77.0
MS.gene045436.t1	MTR_3g091400	33.562	146	94	3	7	149	32	177	2.79e-15	76.6
MS.gene045436.t1	MTR_2g088760	26.522	230	144	5	15	221	14	241	4.68e-15	73.9
MS.gene045436.t1	MTR_2g088760	31.724	145	86	4	167	300	14	156	4.62e-11	62.4
MS.gene045436.t1	MTR_7g117395	32.278	158	100	5	1	152	37	193	2.43e-14	73.6
MS.gene045436.t1	MTR_7g117395	32.278	158	100	5	77	228	37	193	2.43e-14	73.6
MS.gene045436.t1	MTR_7g117395	32.278	158	100	5	153	304	37	193	2.43e-14	73.6
MS.gene045436.t1	MTR_5g076760	58.621	58	24	0	10	67	4	61	7.37e-14	66.2
MS.gene045436.t1	MTR_5g076760	58.621	58	24	0	86	143	4	61	7.37e-14	66.2
MS.gene045436.t1	MTR_5g076760	58.621	58	24	0	162	219	4	61	7.37e-14	66.2
MS.gene045436.t1	MTR_5g076760	58.621	58	24	0	238	295	4	61	7.37e-14	66.2
MS.gene045436.t1	MTR_5g076780	56.452	62	27	0	13	74	2	63	1.00e-13	65.5
MS.gene045436.t1	MTR_5g076780	56.452	62	27	0	89	150	2	63	1.00e-13	65.5
MS.gene045436.t1	MTR_5g076780	56.452	62	27	0	165	226	2	63	1.00e-13	65.5
MS.gene045436.t1	MTR_5g076780	56.452	62	27	0	241	302	2	63	1.00e-13	65.5
MS.gene045436.t1	MTR_5g076350	50.000	74	36	1	1	73	8	81	6.40e-13	63.9
MS.gene045436.t1	MTR_5g076350	50.000	74	36	1	77	149	8	81	6.40e-13	63.9
MS.gene045436.t1	MTR_5g076350	50.000	74	36	1	153	225	8	81	6.40e-13	63.9
MS.gene045436.t1	MTR_5g076350	50.000	74	36	1	229	301	8	81	6.40e-13	63.9
MS.gene045436.t1	MTR_5g076340	52.000	75	34	2	1	73	9	83	3.42e-12	62.0
MS.gene045436.t1	MTR_5g076340	52.000	75	34	2	77	149	9	83	3.42e-12	62.0
MS.gene045436.t1	MTR_5g076340	52.000	75	34	2	153	225	9	83	3.42e-12	62.0
MS.gene045436.t1	MTR_5g076340	52.000	75	34	2	229	301	9	83	3.42e-12	62.0
MS.gene045436.t1	MTR_5g009120	24.405	168	121	3	62	224	16	182	8.83e-11	62.8
MS.gene045436.t1	MTR_5g009120	24.405	168	121	3	138	300	16	182	8.83e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	153	457	0.0	604
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	77	381	0.0	602
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	77	381	0.0	604
MS.gene045436.t1	AT4G05320	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT4G05320	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene045436.t1	AT4G02890	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene045436.t1	AT4G02890	100.000	305	0	0	1	305	1	305	0.0	604
MS.gene045436.t1	AT5G20620	99.672	305	1	0	1	305	1	305	0.0	602
MS.gene045436.t1	AT5G20620	100.000	304	0	0	1	304	77	380	0.0	602
MS.gene045436.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene045436.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene045436.t1	AT5G03240	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene045436.t1	AT5G20620	100.000	304	0	0	1	304	1	304	0.0	602
MS.gene045436.t1	AT1G65350	93.711	318	5	2	1	304	1	317	0.0	570
MS.gene045436.t1	AT5G37640	90.492	305	28	1	1	304	3	307	0.0	538
MS.gene045436.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene045436.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene045436.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene045436.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene045436.t1	AT4G05050	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene045436.t1	AT4G05050	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene045436.t1	AT4G02890	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene045436.t1	AT4G02890	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene045436.t1	AT4G02890	100.000	229	0	0	77	305	1	229	8.12e-164	455
MS.gene045436.t1	AT4G02890	99.563	229	1	0	1	229	1	229	9.06e-163	452
MS.gene045436.t1	AT3G09790	78.481	316	56	3	1	304	3	318	4.75e-162	465
MS.gene045436.t1	AT3G09790	72.347	311	73	3	1	302	319	625	1.21e-140	411
MS.gene045436.t1	AT3G09790	70.126	318	77	4	1	304	238	551	8.75e-137	401
MS.gene045436.t1	AT3G09790	78.481	316	56	3	1	304	3	318	4.75e-162	465
MS.gene045436.t1	AT3G09790	72.347	311	73	3	1	302	319	625	1.21e-140	411
MS.gene045436.t1	AT3G09790	70.126	318	77	4	1	304	238	551	8.75e-137	401
MS.gene045436.t1	AT1G55060	94.298	228	13	0	1	228	1	228	1.65e-153	429
MS.gene045436.t1	AT1G55060	94.298	228	13	0	77	304	1	228	1.65e-153	429
MS.gene045436.t1	AT4G05050	100.000	153	0	0	153	305	1	153	4.82e-106	306
MS.gene045436.t1	AT4G05050	99.346	153	1	0	1	153	1	153	5.11e-105	303
MS.gene045436.t1	AT4G05050	99.346	153	1	0	77	229	1	153	5.11e-105	303
MS.gene045436.t1	AT4G05320	100.000	153	0	0	153	305	1	153	4.82e-106	306
MS.gene045436.t1	AT4G05320	99.346	153	1	0	1	153	1	153	5.11e-105	303
MS.gene045436.t1	AT4G05320	99.346	153	1	0	77	229	1	153	5.11e-105	303
MS.gene045436.t1	AT1G31340	81.046	153	29	0	153	305	1	153	9.52e-84	249
MS.gene045436.t1	AT1G31340	78.846	156	33	0	1	156	1	156	9.94e-83	246
MS.gene045436.t1	AT1G31340	78.846	156	33	0	77	232	1	156	9.94e-83	246
MS.gene045436.t1	AT2G35635	79.739	153	31	0	1	153	1	153	5.27e-82	244
MS.gene045436.t1	AT2G35635	79.739	153	31	0	77	229	1	153	5.27e-82	244
MS.gene045436.t1	AT2G35635	79.739	153	31	0	153	305	1	153	7.38e-82	244
MS.gene045436.t1	AT3G52590	98.701	77	1	0	1	77	1	77	8.87e-48	156
MS.gene045436.t1	AT3G52590	98.701	77	1	0	77	153	1	77	8.87e-48	156
MS.gene045436.t1	AT3G52590	98.701	77	1	0	153	229	1	77	8.87e-48	156
MS.gene045436.t1	AT3G52590	98.701	77	1	0	229	305	1	77	1.10e-47	156
MS.gene045436.t1	AT2G36170	98.701	77	1	0	1	77	1	77	8.87e-48	156
MS.gene045436.t1	AT2G36170	98.701	77	1	0	77	153	1	77	8.87e-48	156
MS.gene045436.t1	AT2G36170	98.701	77	1	0	153	229	1	77	8.87e-48	156
MS.gene045436.t1	AT2G36170	98.701	77	1	0	229	305	1	77	1.10e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	1	78	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	77	154	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	153	230	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	100.000	76	0	0	229	304	1	76	3.33e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	1	78	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	77	154	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	97.436	78	2	0	153	230	1	78	2.86e-47	156
MS.gene045436.t1	AT2G47110	100.000	76	0	0	229	304	1	76	3.33e-47	156
MS.gene045436.t1	AT3G62250	97.436	78	2	0	1	78	1	78	3.09e-47	156
MS.gene045436.t1	AT3G62250	97.436	78	2	0	77	154	1	78	3.09e-47	156
MS.gene045436.t1	AT3G62250	97.436	78	2	0	153	230	1	78	3.09e-47	156
MS.gene045436.t1	AT3G62250	100.000	76	0	0	229	304	1	76	3.67e-47	156
MS.gene045436.t1	AT1G23410	100.000	76	0	0	1	76	1	76	6.17e-47	155
MS.gene045436.t1	AT1G23410	100.000	76	0	0	77	152	1	76	6.17e-47	155
MS.gene045436.t1	AT1G23410	100.000	76	0	0	153	228	1	76	6.17e-47	155
MS.gene045436.t1	AT1G23410	100.000	76	0	0	229	304	1	76	6.17e-47	155
MS.gene045436.t1	AT1G53930	49.091	165	54	7	8	149	1	158	9.07e-34	121
MS.gene045436.t1	AT1G53930	49.091	165	54	7	84	225	1	158	9.07e-34	121
MS.gene045436.t1	AT1G53930	49.091	165	54	7	160	301	1	158	9.07e-34	121
MS.gene045436.t1	AT1G53930	75.342	73	18	0	1	73	86	158	7.14e-31	114
MS.gene045436.t1	AT1G53950	41.463	164	55	3	71	227	14	143	1.76e-26	102
MS.gene045436.t1	AT1G53950	41.463	164	55	3	147	303	14	143	1.76e-26	102
MS.gene045436.t1	AT1G53950	43.038	158	49	3	1	151	20	143	3.24e-26	101
MS.gene045436.t1	AT1G11980	54.545	77	35	0	1	77	1	77	1.43e-22	89.7
MS.gene045436.t1	AT1G11980	54.545	77	35	0	77	153	1	77	1.43e-22	89.7
MS.gene045436.t1	AT1G11980	54.545	77	35	0	153	229	1	77	1.43e-22	89.7
MS.gene045436.t1	AT1G11980	54.545	77	35	0	229	305	1	77	1.50e-22	89.7
MS.gene045436.t1	AT2G46500	35.862	145	90	2	7	148	40	184	3.46e-19	87.8
MS.gene045436.t1	AT2G46500	35.862	145	90	2	159	300	40	184	3.46e-19	87.8
MS.gene045436.t1	AT2G46500	35.862	145	90	2	7	148	40	184	4.90e-19	87.8
MS.gene045436.t1	AT2G46500	35.862	145	90	2	159	300	40	184	4.90e-19	87.8
MS.gene045436.t1	AT2G46500	35.862	145	90	2	7	148	40	184	4.90e-19	87.8
MS.gene045436.t1	AT2G46500	35.862	145	90	2	159	300	40	184	4.90e-19	87.8
MS.gene045436.t1	AT1G53945	38.356	146	53	3	1	143	1	112	2.18e-17	77.0
MS.gene045436.t1	AT1G53945	38.356	146	53	3	77	219	1	112	2.18e-17	77.0
MS.gene045436.t1	AT1G53945	38.356	146	53	3	153	295	1	112	2.18e-17	77.0
MS.gene045436.t1	AT5G24240	33.793	145	91	3	7	147	38	181	1.21e-13	71.6
MS.gene045436.t1	AT5G24240	33.793	145	91	3	83	223	38	181	1.21e-13	71.6
MS.gene045436.t1	AT5G24240	33.793	145	91	3	159	299	38	181	1.21e-13	71.6
MS.gene045436.t1	AT5G24240	33.793	145	91	3	7	147	38	181	1.21e-13	71.6
MS.gene045436.t1	AT5G24240	33.793	145	91	3	83	223	38	181	1.21e-13	71.6
MS.gene045436.t1	AT5G24240	33.793	145	91	3	159	299	38	181	1.21e-13	71.6

Find 92 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCATCCTCCAATTGCTTTC+CGG	0.228225	4.2:-29065265	None:intergenic
ACCCTCTTTGTCCTGGATCT+TGG	0.274270	4.2:-29064983	None:intergenic
AAAATAAGCCTCTGCTGATC+TGG	0.304914	4.2:-29065468	None:intergenic
ACCCTCTTTGTCCTGAATCT+TGG	0.309404	4.2:-29064755	None:intergenic
ATATTTGTGAAGACGCTTAC+TGG	0.318290	4.2:+29065363	MS.gene045436:CDS
CAGCAGAGGCTTATCTTTGC+AGG	0.323151	4.2:+29065018	MS.gene045436:CDS
CAGCAGAGGCTTATCTTTGC+TGG	0.346608	4.2:+29064790	MS.gene045436:CDS
AATGCAAAGTAGATTCCTTC+TGG	0.349783	4.2:-29065311	None:intergenic
TAATGTCAAGGCCAAGATTC+AGG	0.350237	4.2:+29064744	MS.gene045436:CDS
GAAGGAATCTACTTTGCATT+TGG	0.357379	4.2:+29065314	MS.gene045436:CDS
AATGAAGGGTAGATTCCTTC+TGG	0.382623	4.2:-29064855	None:intergenic
GACGGGAAAGACTATTACTT+TGG	0.390154	4.2:+29065152	MS.gene045436:CDS
AATGAAGGGTGGATTCCTTC+TGG	0.393830	4.2:-29065083	None:intergenic
GAAGGAATCCACCCTTCATT+TGG	0.394555	4.2:+29065086	MS.gene045436:CDS
TACTGGGAAGACTATTACCT+TGG	0.397132	4.2:+29065380	MS.gene045436:CDS
AAGATAAGCCTCTGCTGATC+AGG	0.398269	4.2:-29064784	None:intergenic
AAGATAAGCCTCTGCTGATC+AGG	0.404708	4.2:-29065012	None:intergenic
GAAGGAATCTACCCTTCATT+TGG	0.416312	4.2:+29064858	MS.gene045436:CDS
GTGGGATACCCTCTTTGTCC+TGG	0.442832	4.2:-29064990	None:intergenic
AAAATTAGTCTCTGCTGGTC+TGG	0.443739	4.2:-29065240	None:intergenic
TCAATCTAAGCACCAAATGA+AGG	0.460679	4.2:-29065098	None:intergenic
CTTGGCCTTGACATTATCAA+TGG	0.462747	4.2:-29064965	None:intergenic
AAATAAGCCTCTGCTGATCT+GGG	0.465164	4.2:-29065467	None:intergenic
TCAATCTAAGCACCAAATGA+AGG	0.467207	4.2:-29064870	None:intergenic
CACCCTAGAGGTTGAATCCT+CGG	0.468211	4.2:+29064939	MS.gene045436:CDS
CATTTGGTGCTTAGATTGAG+AGG	0.480984	4.2:+29064874	MS.gene045436:CDS
CATTTGGTGCTTAGATTGAG+AGG	0.480984	4.2:+29065102	MS.gene045436:CDS
CACCCTTGAGGTGGAATCAT+CGG	0.482660	4.2:+29064711	MS.gene045436:CDS
ATTGGAGGATGGTCGTACTT+TGG	0.488133	4.2:+29065275	MS.gene045436:CDS
TCTGGATGTTATAATCAGCT+AGG	0.489504	4.2:-29064837	None:intergenic
ATCTTTGTGAAAACATTGAC+TGG	0.491047	4.2:+29064679	MS.gene045436:CDS
AGCAGAGGCTTATCTTTGCT+GGG	0.491816	4.2:+29064791	MS.gene045436:CDS
GGGAAAGACTATTACTTTGG+AGG	0.502909	4.2:+29065155	MS.gene045436:CDS
TCTGGATGTTATAATCAGCT+AGG	0.505255	4.2:-29065065	None:intergenic
TGGGAAGACTATTACCTTGG+AGG	0.507917	4.2:+29065383	MS.gene045436:CDS
TAATGTCAAGGCCAAGATCC+AGG	0.518614	4.2:+29064972	MS.gene045436:CDS
AAAGACTATTACTTTGGAGG+TGG	0.523715	4.2:+29065158	MS.gene045436:CDS
TGATTCCACCTCAAGGGTGA+TGG	0.524625	4.2:-29064707	None:intergenic
ATATTCGTCAAGACTTTGAC+CGG	0.529492	4.2:+29064907	MS.gene045436:CDS
GCTGGCAAGCAGTTGGAGGA+TGG	0.535241	4.2:+29065492	MS.gene045436:CDS
TATTTGTGAAGACGCTTACT+GGG	0.538804	4.2:+29065364	MS.gene045436:CDS
GTTGGAGGATGGTCGTACTC+TGG	0.539382	4.2:+29065503	MS.gene045436:CDS
GCAGGGAAACAACTAGAAGA+TGG	0.551920	4.2:+29065036	MS.gene045436:CDS
TATCCGAGGATTCAACCTCT+AGG	0.556980	4.2:-29064942	None:intergenic
GCCGGAAAGCAATTGGAGGA+TGG	0.558534	4.2:+29065264	MS.gene045436:CDS
AGCAAAGATACAAGATAAGG+AGG	0.559260	4.2:+29065437	MS.gene045436:CDS
CTGGATGTTATAATCAGCTA+GGG	0.560371	4.2:-29064836	None:intergenic
GAAAGCAAAGATACAAGATA+AGG	0.565523	4.2:+29065434	MS.gene045436:CDS
ATCCGAGGATTCAACCTCTA+GGG	0.568186	4.2:-29064941	None:intergenic
AGCAGAGGCTTATCTTTGCA+GGG	0.572317	4.2:+29065019	MS.gene045436:CDS
CTTGTTCTTCGTCTCCGTGG+TGG	0.572507	4.2:+29065561	MS.gene045436:CDS
GAAGACTATTACCTTGGAGG+TGG	0.573223	4.2:+29065386	MS.gene045436:CDS
GCTGGGAAACAACTCGAGGA+TGG	0.573656	4.2:+29064808	MS.gene045436:CDS
GGATTCAACCTCTAGGGTGA+TGG	0.575072	4.2:-29064935	None:intergenic
ATAAGCCTCTGCTGATCAGG+TGG	0.575147	4.2:-29065009	None:intergenic
GACATTATCAATGGTATCCG+AGG	0.576477	4.2:-29064956	None:intergenic
GGAGACGAAGAACAAGATGC+AGG	0.577541	4.2:-29065554	None:intergenic
ATAAGCCTCTGCTGATCAGG+AGG	0.578405	4.2:-29064781	None:intergenic
ATCAGAGCTTTCCACCTCCA+AGG	0.582807	4.2:-29065397	None:intergenic
CAATCTAAGCACCAAATGAA+GGG	0.584307	4.2:-29064869	None:intergenic
ATTAGTCTCTGCTGGTCTGG+AGG	0.592481	4.2:-29065237	None:intergenic
CAATCTAAGCACCAAATGAA+GGG	0.592660	4.2:-29065097	None:intergenic
CTGGATGTTATAATCAGCTA+GGG	0.596159	4.2:-29065064	None:intergenic
TATCCGATGATTCCACCTCA+AGG	0.598701	4.2:-29064714	None:intergenic
CAAAACCATCACCCTTGAGG+TGG	0.600034	4.2:+29064702	MS.gene045436:CDS
CATCTTGTTCTTCGTCTCCG+TGG	0.603344	4.2:+29065558	MS.gene045436:CDS
ATAAGCCTCTGCTGATCTGG+GGG	0.604365	4.2:-29065465	None:intergenic
GGCCAAGATTCAGGACAAAG+AGG	0.609724	4.2:+29064753	MS.gene045436:CDS
AATAAGCCTCTGCTGATCTG+GGG	0.611344	4.2:-29065466	None:intergenic
GGCCAAGATCCAGGACAAAG+AGG	0.613915	4.2:+29064981	MS.gene045436:CDS
GCCAAGATTCAGGACAAAGA+GGG	0.620887	4.2:+29064754	MS.gene045436:CDS
GCCAAGATCCAGGACAAAGA+GGG	0.620887	4.2:+29064982	MS.gene045436:CDS
GCAAAGATACAAGATAAGGA+GGG	0.621833	4.2:+29065438	MS.gene045436:CDS
GGAAACAACTAGAAGATGGA+AGG	0.625020	4.2:+29065040	MS.gene045436:CDS
GGATACAATTGATAATGTCA+AGG	0.626130	4.2:+29064732	MS.gene045436:CDS
GGCTGATTATAATATCCAGA+AGG	0.627715	4.2:+29065296	MS.gene045436:CDS
TTGGTGCTTAGATTGAGAGG+TGG	0.628688	4.2:+29064877	MS.gene045436:CDS
TTGGTGCTTAGATTGAGAGG+TGG	0.628688	4.2:+29065105	MS.gene045436:CDS
ATCCGATGATTCCACCTCAA+GGG	0.629259	4.2:-29064713	None:intergenic
GGATACCATTGATAATGTCA+AGG	0.634466	4.2:+29064960	MS.gene045436:CDS
AGATACTATTGATAATGTCA+AGG	0.637037	4.2:+29065188	MS.gene045436:CDS
TGGCAAAACCATCACCCTTG+AGG	0.648872	4.2:+29064699	MS.gene045436:CDS
TCTAAGCACCAAATGAAGGG+TGG	0.651428	4.2:-29065094	None:intergenic
GTATCCCTCCTGATCAGCAG+AGG	0.654458	4.2:+29064776	MS.gene045436:CDS
CTTTGCTGGGAAACAACTCG+AGG	0.660573	4.2:+29064804	MS.gene045436:CDS
TAAGCCTCTGCTGATCAGGA+GGG	0.663439	4.2:-29064780	None:intergenic
GTATCCCACCTGATCAGCAG+AGG	0.664066	4.2:+29065004	MS.gene045436:CDS
GAGACGAAGAACAAGATGCA+GGG	0.665092	4.2:-29065553	None:intergenic
TAAGCCTCTGCTGATCAGGT+GGG	0.669417	4.2:-29065008	None:intergenic
AGCTGATTATAACATCCAGA+AGG	0.677696	4.2:+29064840	MS.gene045436:CDS
AGCTGATTATAACATCCAGA+AGG	0.677696	4.2:+29065068	MS.gene045436:CDS
AACACACTTAGAAGCCACCA+CGG	0.699059	4.2:-29065575	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGATACTATTGATAATGTCA+AGG	+	chr4.2:29065188-29065207	MS.gene045436:CDS	25.0%
	ATCTTTGTGAAAACATTGAC+TGG	+	chr4.2:29064679-29064698	MS.gene045436:CDS	30.0%
	GAAAGCAAAGATACAAGATA+AGG	+	chr4.2:29065434-29065453	MS.gene045436:CDS	30.0%
	GCAAAAATTCAGGATAAAGA+GGG	+	chr4.2:29065210-29065229	MS.gene045436:CDS	30.0%
	TAATGTCAAGGCAAAAATTC+AGG	+	chr4.2:29065200-29065219	MS.gene045436:CDS	30.0%
!	ATTTTTGTGAAGACTTTGAC+GGG	+	chr4.2:29065135-29065154	MS.gene045436:CDS	30.0%
!	GATTTTTGTGAAGACTTTGA+CGG	+	chr4.2:29065134-29065153	MS.gene045436:CDS	30.0%
!!	GGATACAATTGATAATGTCA+AGG	+	chr4.2:29064732-29064751	MS.gene045436:CDS	30.0%
	AATGCAAAGTAGATTCCTTC+TGG	-	chr4.2:29065314-29065333	None:intergenic	35.0%
	AGCAAAGATACAAGATAAGG+AGG	+	chr4.2:29065437-29065456	MS.gene045436:CDS	35.0%
	AGCTGATTATAACATCCAGA+AGG	+	chr4.2:29064840-29064859	MS.gene045436:CDS	35.0%
	ATATTCGTCAAGACTTTGAC+CGG	+	chr4.2:29064907-29064926	MS.gene045436:CDS	35.0%
	ATATTTGTGAAGACGCTTAC+TGG	+	chr4.2:29065363-29065382	MS.gene045436:CDS	35.0%
	CAATCTAAGCACCAAATGAA+GGG	-	chr4.2:29064872-29064891	None:intergenic	35.0%
	CTGGATGTTATAATCAGCTA+GGG	-	chr4.2:29064839-29064858	None:intergenic	35.0%
	GAAGGAATCTACTTTGCATT+TGG	+	chr4.2:29065314-29065333	MS.gene045436:CDS	35.0%
	GCAAAGATACAAGATAAGGA+GGG	+	chr4.2:29065438-29065457	MS.gene045436:CDS	35.0%
	GGCAAAAATTCAGGATAAAG+AGG	+	chr4.2:29065209-29065228	MS.gene045436:CDS	35.0%
	GGCTGATTATAATATCCAGA+AGG	+	chr4.2:29065296-29065315	MS.gene045436:CDS	35.0%
	TATTTGTGAAGACGCTTACT+GGG	+	chr4.2:29065364-29065383	MS.gene045436:CDS	35.0%
	TCAATCTAAGCACCAAATGA+AGG	-	chr4.2:29064873-29064892	None:intergenic	35.0%
	TCTGGATGTTATAATCAGCT+AGG	-	chr4.2:29064840-29064859	None:intergenic	35.0%
!	AAAGACTATTACTTTGGAGG+TGG	+	chr4.2:29065158-29065177	MS.gene045436:CDS	35.0%
!	AATTTTTGCCGGAAAGCAAT+TGG	+	chr4.2:29065257-29065276	MS.gene045436:CDS	35.0%
!!	GGATACCATTGATAATGTCA+AGG	+	chr4.2:29064960-29064979	MS.gene045436:CDS	35.0%
!!!	CTACTTTGCATTTGGTTTTG+AGG	+	chr4.2:29065322-29065341	MS.gene045436:CDS	35.0%
	AAAATAAGCCTCTGCTGATC+TGG	-	chr4.2:29065471-29065490	None:intergenic	40.0%
	AAATAAGCCTCTGCTGATCT+GGG	-	chr4.2:29065470-29065489	None:intergenic	40.0%
	AATGAAGGGTAGATTCCTTC+TGG	-	chr4.2:29064858-29064877	None:intergenic	40.0%
	GAAGGAATCTACCCTTCATT+TGG	+	chr4.2:29064858-29064877	MS.gene045436:CDS	40.0%
	GACATTATCAATGGTATCCG+AGG	-	chr4.2:29064959-29064978	None:intergenic	40.0%
	GACGGGAAAGACTATTACTT+TGG	+	chr4.2:29065152-29065171	MS.gene045436:CDS	40.0%
	GGAAACAACTAGAAGATGGA+AGG	+	chr4.2:29065040-29065059	MS.gene045436:CDS	40.0%
	GGGAAAGACTATTACTTTGG+AGG	+	chr4.2:29065155-29065174	MS.gene045436:CDS	40.0%
	TAATGTCAAGGCCAAGATTC+AGG	+	chr4.2:29064744-29064763	MS.gene045436:CDS	40.0%
	TACTGGGAAGACTATTACCT+TGG	+	chr4.2:29065380-29065399	MS.gene045436:CDS	40.0%
!	AAAATTAGTCTCTGCTGGTC+TGG	-	chr4.2:29065243-29065262	None:intergenic	40.0%
!	CAGCAGAGACTAATTTTTGC+CGG	+	chr4.2:29065246-29065265	MS.gene045436:CDS	40.0%
!!	CATTTGGTGCTTAGATTGAG+AGG	+	chr4.2:29064874-29064893	MS.gene045436:CDS	40.0%
!!	CTTGGCCTTGACATTATCAA+TGG	-	chr4.2:29064740-29064759	None:intergenic	40.0%
!!	TATTTTTGCTGGCAAGCAGT+TGG	+	chr4.2:29065485-29065504	MS.gene045436:CDS	40.0%
	AAGATAAGCCTCTGCTGATC+AGG	-	chr4.2:29064787-29064806	None:intergenic	45.0%
	AATAAGCCTCTGCTGATCTG+GGG	-	chr4.2:29065469-29065488	None:intergenic	45.0%
	ACCATCCTCCAATTGCTTTC+CGG	-	chr4.2:29065268-29065287	None:intergenic	45.0%
	ACCCTCTTTGTCCTGAATCT+TGG	-	chr4.2:29064758-29064777	None:intergenic	45.0%
	AGCAGAGGCTTATCTTTGCA+GGG	+	chr4.2:29065019-29065038	MS.gene045436:CDS	45.0%
	AGCAGAGGCTTATCTTTGCT+GGG	+	chr4.2:29064791-29064810	MS.gene045436:CDS	45.0%
	ATCCGAGGATTCAACCTCTA+GGG	-	chr4.2:29064944-29064963	None:intergenic	45.0%
	ATCCGATGATTCCACCTCAA+GGG	-	chr4.2:29064716-29064735	None:intergenic	45.0%
	ATTGGAGGATGGTCGTACTT+TGG	+	chr4.2:29065275-29065294	MS.gene045436:CDS	45.0%
	GAAGACTATTACCTTGGAGG+TGG	+	chr4.2:29065386-29065405	MS.gene045436:CDS	45.0%
	GAAGGAATCCACCCTTCATT+TGG	+	chr4.2:29065086-29065105	MS.gene045436:CDS	45.0%
	GAGACGAAGAACAAGATGCA+GGG	-	chr4.2:29065556-29065575	None:intergenic	45.0%
	GCAGGGAAACAACTAGAAGA+TGG	+	chr4.2:29065036-29065055	MS.gene045436:CDS	45.0%
	GCCAAGATTCAGGACAAAGA+GGG	+	chr4.2:29064754-29064773	MS.gene045436:CDS	45.0%
	TAATGTCAAGGCCAAGATCC+AGG	+	chr4.2:29064972-29064991	MS.gene045436:CDS	45.0%
	TATCCGAGGATTCAACCTCT+AGG	-	chr4.2:29064945-29064964	None:intergenic	45.0%
	TATCCGATGATTCCACCTCA+AGG	-	chr4.2:29064717-29064736	None:intergenic	45.0%
	TCTAAGCACCAAATGAAGGG+TGG	-	chr4.2:29064869-29064888	None:intergenic	45.0%
	TGGGAAGACTATTACCTTGG+AGG	+	chr4.2:29065383-29065402	MS.gene045436:CDS	45.0%
!	AATGAAGGGTGGATTCCTTC+TGG	-	chr4.2:29065086-29065105	None:intergenic	45.0%
!	CGGCAAAAATTAGTCTCTGC+TGG	-	chr4.2:29065248-29065267	None:intergenic	45.0%
!	TTGGTGCTTAGATTGAGAGG+TGG	+	chr4.2:29064877-29064896	MS.gene045436:CDS	45.0%
!	TTTTGCCGGAAAGCAATTGG+AGG	+	chr4.2:29065260-29065279	MS.gene045436:CDS	45.0%
!!!	CAGCAGAGGCTTATTTTTGC+TGG	+	chr4.2:29065474-29065493	MS.gene045436:CDS	45.0%
!!!	CATTTGGTTTTGAGGCTTCG+TGG	+	chr4.2:29065330-29065349	MS.gene045436:CDS	45.0%
!!!	CTCTAGGGTGATGGTTTTTC+CGG	-	chr4.2:29064929-29064948	None:intergenic	45.0%
	ACCCTCTTTGTCCTGGATCT+TGG	-	chr4.2:29064986-29065005	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCAGG+AGG	-	chr4.2:29064784-29064803	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCAGG+TGG	-	chr4.2:29064784-29064803	None:intergenic	50.0%
	ATAAGCCTCTGCTGATCTGG+GGG	-	chr4.2:29065468-29065487	None:intergenic	50.0%
	ATCAGAGCTTTCCACCTCCA+AGG	-	chr4.2:29065400-29065419	None:intergenic	50.0%
	CAAAACCATCACCCTTGAGG+TGG	+	chr4.2:29064702-29064721	MS.gene045436:CDS	50.0%
	CACCCTAGAGGTTGAATCCT+CGG	+	chr4.2:29064939-29064958	MS.gene045436:CDS	50.0%
	CACCCTTGAGGTGGAATCAT+CGG	+	chr4.2:29064711-29064730	MS.gene045436:CDS	50.0%
	CAGCAGAGGCTTATCTTTGC+AGG	+	chr4.2:29064790-29064809	MS.gene045436:CDS	50.0%
	CAGCAGAGGCTTATCTTTGC+TGG	+	chr4.2:29064790-29064809	MS.gene045436:CDS	50.0%
	CATCTTGTTCTTCGTCTCCG+TGG	+	chr4.2:29065558-29065577	MS.gene045436:CDS	50.0%
	CGGAAAAACCATCACCCTAG+AGG	+	chr4.2:29064927-29064946	MS.gene045436:CDS	50.0%
	CTTTGCTGGGAAACAACTCG+AGG	+	chr4.2:29064804-29064823	MS.gene045436:CDS	50.0%
	GCCAAGATCCAGGACAAAGA+GGG	+	chr4.2:29064982-29065001	MS.gene045436:CDS	50.0%
	GGAGACGAAGAACAAGATGC+AGG	-	chr4.2:29065557-29065576	None:intergenic	50.0%
	GGCCAAGATTCAGGACAAAG+AGG	+	chr4.2:29064753-29064772	MS.gene045436:CDS	50.0%
	TAAGCCTCTGCTGATCAGGA+GGG	-	chr4.2:29064783-29064802	None:intergenic	50.0%
	TAAGCCTCTGCTGATCAGGT+GGG	-	chr4.2:29065011-29065030	None:intergenic	50.0%
	TGATTCCACCTCAAGGGTGA+TGG	-	chr4.2:29064710-29064729	None:intergenic	50.0%
	TGGCAAAACCATCACCCTTG+AGG	+	chr4.2:29064699-29064718	MS.gene045436:CDS	50.0%
!	ATTAGTCTCTGCTGGTCTGG+AGG	-	chr4.2:29065240-29065259	None:intergenic	50.0%
!	TTTTGCTGGCAAGCAGTTGG+AGG	+	chr4.2:29065488-29065507	MS.gene045436:CDS	50.0%
!!	GGATTCAACCTCTAGGGTGA+TGG	-	chr4.2:29064938-29064957	None:intergenic	50.0%
!!!	TTGGTTTTGAGGCTTCGTGG+TGG	+	chr4.2:29065333-29065352	MS.gene045436:CDS	50.0%
	CTTGTTCTTCGTCTCCGTGG+TGG	+	chr4.2:29065561-29065580	MS.gene045436:CDS	55.0%
	GCCGGAAAGCAATTGGAGGA+TGG	+	chr4.2:29065264-29065283	MS.gene045436:CDS	55.0%
	GCTGGGAAACAACTCGAGGA+TGG	+	chr4.2:29064808-29064827	MS.gene045436:CDS	55.0%
	GGCCAAGATCCAGGACAAAG+AGG	+	chr4.2:29064981-29065000	MS.gene045436:CDS	55.0%
	GTATCCCACCTGATCAGCAG+AGG	+	chr4.2:29065004-29065023	MS.gene045436:CDS	55.0%
	GTATCCCTCCTGATCAGCAG+AGG	+	chr4.2:29064776-29064795	MS.gene045436:CDS	55.0%
	GTATTCCCCCAGATCAGCAG+AGG	+	chr4.2:29065460-29065479	MS.gene045436:CDS	55.0%
	GTGGGATACCCTCTTTGTCC+TGG	-	chr4.2:29064993-29065012	None:intergenic	55.0%
	GTTGGAGGATGGTCGTACTC+TGG	+	chr4.2:29065503-29065522	MS.gene045436:CDS	55.0%
	GCTGGCAAGCAGTTGGAGGA+TGG	+	chr4.2:29065492-29065511	MS.gene045436:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	29064673	29065590	29064673	ID=MS.gene045436
chr4.2	mRNA	29064673	29065590	29064673	ID=MS.gene045436.t1;Parent=MS.gene045436
chr4.2	exon	29064673	29065590	29064673	ID=MS.gene045436.t1.exon1;Parent=MS.gene045436.t1
chr4.2	CDS	29064673	29065590	29064673	ID=cds.MS.gene045436.t1;Parent=MS.gene045436.t1

Gene Sequence

>MS.gene045436

ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATCACCCTTGAGGTGGAATCATCGGATACAATTGATAATGTCAAGGCCAAGATTCAGGACAAAGAGGGTATCCCTCCTGATCAGCAGAGGCTTATCTTTGCTGGGAAACAACTCGAGGATGGAAGAACCCTAGCTGATTATAACATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATATTCGTCAAGACTTTGACCGGAAAAACCATCACCCTAGAGGTTGAATCCTCGGATACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCACCTGATCAGCAGAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATTTTTGTGAAGACTTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGTTCAGATACTATTGATAATGTCAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCAGCAGAGACTAATTTTTGCCGGAAAGCAATTGGAGGATGGTCGTACTTTGGCTGATTATAATATCCAGAAGGAATCTACTTTGCATTTGGTTTTGAGGCTTCGTGGTGGCATGCAAATATTTGTGAAGACGCTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCTGATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAGCAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAATATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGTCTCCGTGGTGGCTTCTAA

Protein sequence

>MS.gene045436.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF