Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011731.t1 | XP_013457492.1 | 98.7 | 452 | 6 | 0 | 11 | 462 | 1 | 452 | 2.70E-270 | 940.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011731.t1 | Q50228 | 50.1 | 427 | 186 | 6 | 17 | 443 | 2 | 401 | 5.9e-125 | 449.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011731.t1 | B7FKV4 | 98.7 | 452 | 6 | 0 | 11 | 462 | 1 | 452 | 1.9e-270 | 940.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061115 | MS.gene011731 | PPI |
| MS.gene011729 | MS.gene011731 | PPI |
| MS.gene44475 | MS.gene011731 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011731.t1 | MTR_4g095660 | 98.673 | 452 | 6 | 0 | 11 | 462 | 1 | 452 | 0.0 | 922 |
| MS.gene011731.t1 | MTR_4g095660 | 93.363 | 452 | 30 | 0 | 11 | 462 | 1 | 452 | 0.0 | 870 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011731.t1 | AT4G37560 | 81.858 | 452 | 82 | 0 | 11 | 462 | 1 | 452 | 0.0 | 784 |
| MS.gene011731.t1 | AT4G37550 | 81.637 | 452 | 83 | 0 | 11 | 462 | 1 | 452 | 0.0 | 762 |
| MS.gene011731.t1 | AT4G37550 | 78.540 | 452 | 77 | 1 | 11 | 462 | 1 | 432 | 0.0 | 723 |
| MS.gene011731.t1 | AT4G37560 | 82.524 | 412 | 72 | 0 | 11 | 422 | 1 | 412 | 0.0 | 723 |
| MS.gene011731.t1 | AT4G37550 | 81.796 | 412 | 75 | 0 | 11 | 422 | 1 | 412 | 0.0 | 699 |
| MS.gene011731.t1 | AT4G37550 | 79.843 | 382 | 77 | 0 | 11 | 392 | 1 | 382 | 0.0 | 631 |
| MS.gene011731.t1 | AT4G37550 | 85.099 | 302 | 45 | 0 | 161 | 462 | 1 | 302 | 0.0 | 541 |
| MS.gene011731.t1 | AT4G37550 | 77.627 | 295 | 66 | 0 | 11 | 305 | 1 | 295 | 2.40e-166 | 471 |
Find 0 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAAAATAAAAAATC+AGG | + | 32637:8447-8466 | MS.gene011731:intergenic | 10.0% |
| !!! | TTTTTTTTGGTAATTAATTT+TGG | - | 32637:9887-9906 | MS.gene011731:intron | 10.0% |
| !! | AACTTTAAATAATAGTTATG+TGG | - | 32637:11990-12009 | MS.gene011731:CDS | 15.0% |
| !! | ATATTATATATGAGAACAAA+GGG | - | 32637:10352-10371 | MS.gene011731:intron | 15.0% |
| !! | GTATTATTAACATAATTGTA+TGG | + | 32637:11115-11134 | MS.gene011731:intergenic | 15.0% |
| !! | TATATTATATATGAGAACAA+AGG | - | 32637:10351-10370 | MS.gene011731:intron | 15.0% |
| !! | TTATATTTAACCTTAGATAA+CGG | + | 32637:8807-8826 | MS.gene011731:intergenic | 15.0% |
| !!! | AAATTAAATTCATTTTCGTA+TGG | + | 32637:11451-11470 | MS.gene011731:intergenic | 15.0% |
| !!! | AAATTAACTACTTTTCATAA+AGG | - | 32637:10299-10318 | MS.gene011731:intron | 15.0% |
| !!! | AATACATATTAGTACATTTT+TGG | + | 32637:8552-8571 | MS.gene011731:intergenic | 15.0% |
| !!! | AATTAAATTCATTTTCGTAT+GGG | + | 32637:11450-11469 | MS.gene011731:intergenic | 15.0% |
| !!! | ACATAGTTTTATTTTACATT+AGG | + | 32637:11874-11893 | MS.gene011731:intergenic | 15.0% |
| !!! | ACATGTCTTTTTTTTTTTTT+TGG | - | 32637:9874-9893 | MS.gene011731:intron | 15.0% |
| !!! | ATAGTTTTATTTTACATTAG+GGG | + | 32637:11872-11891 | MS.gene011731:intergenic | 15.0% |
| !!! | CATAGTTTTATTTTACATTA+GGG | + | 32637:11873-11892 | MS.gene011731:intergenic | 15.0% |
| !! | AATTCATCTCTATGTAAAAA+AGG | - | 32637:11631-11650 | MS.gene011731:intron | 20.0% |
| !! | AATTGACATATATATTTACC+TGG | + | 32637:11842-11861 | MS.gene011731:intergenic | 20.0% |
| !! | ACAAAATTCTCAATCATATT+AGG | - | 32637:11915-11934 | MS.gene011731:CDS | 20.0% |
| !! | ATAATTTATTCATCCAAACA+TGG | - | 32637:9572-9591 | MS.gene011731:CDS | 20.0% |
| !! | ATCTACTACCTTAATATATA+AGG | - | 32637:8834-8853 | MS.gene011731:CDS | 20.0% |
| !! | GTTTGAATCCTTATATATTA+AGG | + | 32637:8845-8864 | MS.gene011731:intergenic | 20.0% |
| !! | TAAAACTATGTCTAATACAT+TGG | - | 32637:11883-11902 | MS.gene011731:intron | 20.0% |
| !! | TAATTTATTCATCCAAACAT+GGG | - | 32637:9573-9592 | MS.gene011731:CDS | 20.0% |
| !! | TATGACAAGATAAAATAAAG+TGG | + | 32637:9496-9515 | MS.gene011731:intergenic | 20.0% |
| !! | TATTAACATAATTGTATGGA+AGG | + | 32637:11111-11130 | MS.gene011731:intergenic | 20.0% |
| !!! | ACTTGATTTGAATTGTTATT+TGG | + | 32637:8943-8962 | MS.gene011731:intergenic | 20.0% |
| !!! | ATTGTTTTCAACTTATATTC+TGG | - | 32637:9428-9447 | MS.gene011731:intron | 20.0% |
| !!! | TAAACATTTTCTTTTGAATG+TGG | + | 32637:8512-8531 | MS.gene011731:intergenic | 20.0% |
| !!! | TGAAGTCATTTTGTTTTATT+CGG | + | 32637:11555-11574 | MS.gene011731:intergenic | 20.0% |
| !!! | TTGTTTTCAACTTATATTCT+GGG | - | 32637:9429-9448 | MS.gene011731:intron | 20.0% |
| ! | AAACTCTTGTAGATTGAAAA+AGG | - | 32637:10816-10835 | MS.gene011731:intron | 25.0% |
| ! | CGTTAAAATAGCATTAAATG+TGG | + | 32637:10279-10298 | MS.gene011731:intergenic | 25.0% |
| ! | CTGGTTAATTAAACAAAAAG+TGG | + | 32637:10188-10207 | MS.gene011731:intergenic | 25.0% |
| ! | GAATGTGGAAAGAAAATTAA+AGG | + | 32637:8497-8516 | MS.gene011731:intergenic | 25.0% |
| ! | GATAACTAATTAATCTCCTT+TGG | - | 32637:8641-8660 | MS.gene011731:intron | 25.0% |
| ! | GATTTACAATCTTGATCTAA+CGG | + | 32637:9636-9655 | MS.gene011731:intergenic | 25.0% |
| ! | TAAAGATATCACACTAGAAA+TGG | - | 32637:8064-8083 | MS.gene011731:CDS | 25.0% |
| ! | TAAGATAGTTTACTGATAAG+TGG | - | 32637:9781-9800 | MS.gene011731:intron | 25.0% |
| ! | TAATTAGTTATCGACAAAGT+CGG | + | 32637:8633-8652 | MS.gene011731:intergenic | 25.0% |
| ! | TAGACCTGAATAATGTTTAA+GGG | + | 32637:11720-11739 | MS.gene011731:intergenic | 25.0% |
| ! | TATAAGCTATGAAGCATATA+CGG | + | 32637:10710-10729 | MS.gene011731:intergenic | 25.0% |
| ! | TATAATTTCACACCTGATTA+TGG | + | 32637:11152-11171 | MS.gene011731:intergenic | 25.0% |
| ! | TTATTCATATTACCTTTCCA+AGG | + | 32637:10641-10660 | MS.gene011731:intergenic | 25.0% |
| ! | TTTCTTTGTAACTATGTGAT+CGG | - | 32637:8594-8613 | MS.gene011731:intron | 25.0% |
| !! | AGATATTGTTGTTACATGTT+TGG | + | 32637:9021-9040 | MS.gene011731:intergenic | 25.0% |
| !! | ATACTTGTAGATGATTTTGA+TGG | + | 32637:8867-8886 | MS.gene011731:intergenic | 25.0% |
| !! | GGTAATTAATTTTGGATGAT+GGG | - | 32637:9895-9914 | MS.gene011731:intron | 25.0% |
| !! | GTAATTAATTTTGGATGATG+GGG | - | 32637:9896-9915 | MS.gene011731:intron | 25.0% |
| !! | GTGTAAATTAAGAGTATGTT+TGG | - | 32637:9318-9337 | MS.gene011731:CDS | 25.0% |
| !! | TCAAACATGTACAATGATTT+TGG | + | 32637:9073-9092 | MS.gene011731:intergenic | 25.0% |
| !! | TGGTAATTAATTTTGGATGA+TGG | - | 32637:9894-9913 | MS.gene011731:intron | 25.0% |
| !! | TTTTGGTATCAACTATTTTG+AGG | + | 32637:8535-8554 | MS.gene011731:intergenic | 25.0% |
| !!! | ACTTATGTGATCATTTTTGT+TGG | - | 32637:10430-10449 | MS.gene011731:intron | 25.0% |
| !!! | TGAAAAAGGTACTGATAAAT+GGG | - | 32637:10830-10849 | MS.gene011731:intron | 25.0% |
| !!! | TGCATGATTTTGAAAACATT+TGG | + | 32637:9599-9618 | MS.gene011731:intergenic | 25.0% |
| !!! | TTGAAAAAGGTACTGATAAA+TGG | - | 32637:10829-10848 | MS.gene011731:intron | 25.0% |
| AACATAAACACCGTTATCTA+AGG | - | 32637:8794-8813 | MS.gene011731:intron | 30.0% | |
| AACTTCCTCTTCATAATAGA+TGG | - | 32637:9159-9178 | MS.gene011731:CDS | 30.0% | |
| AATAGAAATGAGTGGTTTCT+TGG | - | 32637:11034-11053 | MS.gene011731:intron | 30.0% | |
| AATTTACACTTACAACTGAG+AGG | + | 32637:9307-9326 | MS.gene011731:intergenic | 30.0% | |
| ATAACACATCCTGGTATAAT+AGG | - | 32637:10474-10493 | MS.gene011731:intron | 30.0% | |
| ATAAGAATTGTGGACAATGA+TGG | - | 32637:9951-9970 | MS.gene011731:intron | 30.0% | |
| ATCAGGTGTGAAATTATAAG+AGG | - | 32637:11154-11173 | MS.gene011731:intron | 30.0% | |
| ATCTCAGATCTCACTAAATA+TGG | + | 32637:8679-8698 | MS.gene011731:intergenic | 30.0% | |
| ATGGTCAATTAGATTTCCAA+AGG | + | 32637:8660-8679 | MS.gene011731:intergenic | 30.0% | |
| ATTGACTACATATCCAAGTT+TGG | - | 32637:11364-11383 | MS.gene011731:intron | 30.0% | |
| CAAGTATGTTACATCACAAA+AGG | - | 32637:11656-11675 | MS.gene011731:intron | 30.0% | |
| CTACAAGAGTTTCAAGAAAA+GGG | + | 32637:10808-10827 | MS.gene011731:intergenic | 30.0% | |
| CTATCCCTTAAACATTATTC+AGG | - | 32637:11713-11732 | MS.gene011731:intron | 30.0% | |
| CTATGCTTATTCCATTTAGA+AGG | - | 32637:8712-8731 | MS.gene011731:intron | 30.0% | |
| GATTATGGCACAATAAAAGA+GGG | + | 32637:11137-11156 | MS.gene011731:intergenic | 30.0% | |
| GGAAAAGTCATTGAAATAAG+TGG | - | 32637:9694-9713 | MS.gene011731:CDS | 30.0% | |
| GTAGACCTGAATAATGTTTA+AGG | + | 32637:11721-11740 | MS.gene011731:intergenic | 30.0% | |
| GTTGAAATGATAGATTTCAG+TGG | - | 32637:8221-8240 | MS.gene011731:intron | 30.0% | |
| TAACATAGTTTCCTGATAAG+TGG | - | 32637:9737-9756 | MS.gene011731:intron | 30.0% | |
| TCAAATCAAGTCACTATATG+TGG | - | 32637:8952-8971 | MS.gene011731:CDS | 30.0% | |
| TCACATTGCTAATGTCAAAA+CGG | + | 32637:10682-10701 | MS.gene011731:intergenic | 30.0% | |
| TCATTGTCCACAATTCTTAT+TGG | + | 32637:9951-9970 | MS.gene011731:intergenic | 30.0% | |
| TCTACAAGAGTTTCAAGAAA+AGG | + | 32637:10809-10828 | MS.gene011731:intergenic | 30.0% | |
| TCTAGTGTGATATCTTTACA+AGG | + | 32637:8062-8081 | MS.gene011731:intergenic | 30.0% | |
| TCTAGTTACGTAGATATTTG+TGG | - | 32637:11516-11535 | MS.gene011731:intron | 30.0% | |
| TGATTATGGCACAATAAAAG+AGG | + | 32637:11138-11157 | MS.gene011731:intergenic | 30.0% | |
| TTAACAAGCCAACAAAACAA+TGG | + | 32637:10751-10770 | MS.gene011731:intergenic | 30.0% | |
| TTAGAGTAGAAATGGTAGAT+TGG | - | 32637:9228-9247 | MS.gene011731:CDS | 30.0% | |
| ! | TCTTTTATTGTGCCATAATC+AGG | - | 32637:11137-11156 | MS.gene011731:intron | 30.0% |
| ! | TTGTTGCTTAAATTTCAGAC+TGG | + | 32637:10207-10226 | MS.gene011731:intergenic | 30.0% |
| !! | AAATATTGGGTTGACATGAA+GGG | + | 32637:11218-11237 | MS.gene011731:intergenic | 30.0% |
| !! | TACATAGACCATTGTTTTGT+TGG | - | 32637:10740-10759 | MS.gene011731:intron | 30.0% |
| !! | TGAAGTCTTTAGAGTAGAAA+TGG | - | 32637:9220-9239 | MS.gene011731:CDS | 30.0% |
| !! | TGTGATCATTTTTGTTGGAT+AGG | - | 32637:10435-10454 | MS.gene011731:intron | 30.0% |
| AAAAAGTTGTCTCCTTGGAA+AGG | - | 32637:10626-10645 | MS.gene011731:intron | 35.0% | |
| AAAGCTATCTGGTACTTTGA+AGG | - | 32637:10116-10135 | MS.gene011731:CDS | 35.0% | |
| AAGCTATCTGGTACTTTGAA+GGG | - | 32637:10117-10136 | MS.gene011731:CDS | 35.0% | |
| ACAGAAAAAAGTTGTCTCCT+TGG | - | 32637:10621-10640 | MS.gene011731:intron | 35.0% | |
| ACATTTGACAGAGAAAATGG+AGG | - | 32637:10059-10078 | MS.gene011731:CDS | 35.0% | |
| ACTCATAGTTGACTGATAAG+TGG | - | 32637:9673-9692 | MS.gene011731:CDS | 35.0% | |
| AGACTTAAAGAAGAAGCCAT+GGG | - | 32637:8118-8137 | MS.gene011731:CDS | 35.0% | |
| AGGTGTGAAATTATAAGAGG+AGG | - | 32637:11157-11176 | MS.gene011731:intron | 35.0% | |
| ATAAATGGGAGAAGATTGCA+AGG | - | 32637:10844-10863 | MS.gene011731:intron | 35.0% | |
| ATGTTTAGGAGTTCCATTGA+TGG | + | 32637:10507-10526 | MS.gene011731:intergenic | 35.0% | |
| CAATGGAACTCCTAAACATA+TGG | - | 32637:10508-10527 | MS.gene011731:intron | 35.0% | |
| CCAGTGAATGATTGAAAATG+CGG | + | 32637:8915-8934 | MS.gene011731:intergenic | 35.0% | |
| CCTAAACATATGGAACGAAA+GGG | - | 32637:10518-10537 | MS.gene011731:intron | 35.0% | |
| GAAAGAGATGTTGCAGAAAA+TGG | - | 32637:10540-10559 | MS.gene011731:intron | 35.0% | |
| GAAATGATAGATTTCAGTGG+AGG | - | 32637:8224-8243 | MS.gene011731:intron | 35.0% | |
| GACATAAAGAATCTAAGCAG+AGG | - | 32637:10912-10931 | MS.gene011731:intron | 35.0% | |
| GCAACATTTGACAGAGAAAA+TGG | - | 32637:10056-10075 | MS.gene011731:CDS | 35.0% | |
| GCAGTTGAAATATGCAACTT+GGG | - | 32637:10002-10021 | MS.gene011731:intron | 35.0% | |
| GTCTTCAAATGCACTTATGA+TGG | - | 32637:12089-12108 | MS.gene011731:CDS | 35.0% | |
| TAAATGGGAGAAGATTGCAA+GGG | - | 32637:10845-10864 | MS.gene011731:intron | 35.0% | |
| TAAGTGCATTTGAAGACATC+TGG | + | 32637:12086-12105 | MS.gene011731:intergenic | 35.0% | |
| TAGACTTAAAGAAGAAGCCA+TGG | - | 32637:8117-8136 | MS.gene011731:CDS | 35.0% | |
| TCAAACATTGTCACAACTCA+CGG | + | 32637:9380-9399 | MS.gene011731:intergenic | 35.0% | |
| TCATTGTACATGTTTGACCA+TGG | - | 32637:9076-9095 | MS.gene011731:intron | 35.0% | |
| TCCTAAACATATGGAACGAA+AGG | - | 32637:10517-10536 | MS.gene011731:intron | 35.0% | |
| TCGAATTCGAACCTTCTAAA+TGG | + | 32637:8726-8745 | MS.gene011731:intergenic | 35.0% | |
| TCGTTATGGTTCAAGAATGT+TGG | - | 32637:8088-8107 | MS.gene011731:CDS | 35.0% | |
| TGCAGTTGAAATATGCAACT+TGG | - | 32637:10001-10020 | MS.gene011731:intron | 35.0% | |
| TGGCTTCTTCTTTAAGTCTA+CGG | + | 32637:8117-8136 | MS.gene011731:intergenic | 35.0% | |
| TTAGCTCCTTCTACAAAAAC+AGG | + | 32637:10954-10973 | MS.gene011731:intergenic | 35.0% | |
| ! | AGACATCTGGTTTCTTTACA+AGG | + | 32637:12073-12092 | MS.gene011731:intergenic | 35.0% |
| ! | ATTTTTGTTGGATAGGAGTG+AGG | - | 32637:10442-10461 | MS.gene011731:intron | 35.0% |
| ! | CGCATTTTCAATCATTCACT+GGG | - | 32637:8913-8932 | MS.gene011731:CDS | 35.0% |
| ! | GTCAACCCAATATTTGAGAT+AGG | - | 32637:11223-11242 | MS.gene011731:intron | 35.0% |
| !! | AAAGAGTACCTTACACCAAT+GGG | - | 32637:11184-11203 | MS.gene011731:intron | 35.0% |
| !! | AAAGTACCAGATAGCTTTTG+TGG | + | 32637:10114-10133 | MS.gene011731:intergenic | 35.0% |
| !! | AATATTGGGTTGACATGAAG+GGG | + | 32637:11217-11236 | MS.gene011731:intergenic | 35.0% |
| !! | CAAATATTGGGTTGACATGA+AGG | + | 32637:11219-11238 | MS.gene011731:intergenic | 35.0% |
| !! | TTCTTTTGAGTAGCCAAACT+TGG | + | 32637:11380-11399 | MS.gene011731:intergenic | 35.0% |
| !!! | AATTTTGGATGATGGGGAAA+TGG | - | 32637:9902-9921 | MS.gene011731:intron | 35.0% |
| !!! | AGGAGACAACTTTTTTCTGT+TGG | + | 32637:10621-10640 | MS.gene011731:intergenic | 35.0% |
| !!! | ATTTTGGATGATGGGGAAAT+GGG | - | 32637:9903-9922 | MS.gene011731:intron | 35.0% |
| !!! | GCACTGAGATTTTTTGTGAT+GGG | + | 32637:12122-12141 | MS.gene011731:intergenic | 35.0% |
| !!! | GGCTTCTTTTTTAGGTCTAT+TGG | + | 32637:9128-9147 | MS.gene011731:intergenic | 35.0% |
| !!! | GTTCACATGGCTTCTTTTTT+AGG | + | 32637:9136-9155 | MS.gene011731:intergenic | 35.0% |
| !!! | TACCTTCCTGTTTTTGTAGA+AGG | - | 32637:10945-10964 | MS.gene011731:intron | 35.0% |
| AACTACCTCTTCACAATAGG+TGG | - | 32637:8147-8166 | MS.gene011731:CDS | 40.0% | |
| AATAGGAACTGCACCATCAA+TGG | - | 32637:10491-10510 | MS.gene011731:intron | 40.0% | |
| ACAATACCGGGAAGAGAAAA+TGG | - | 32637:10879-10898 | MS.gene011731:intron | 40.0% | |
| ACACTAGAAATGGCTCGTTA+TGG | - | 32637:8074-8093 | MS.gene011731:CDS | 40.0% | |
| ACATGTTTGGCATTACTCTG+AGG | + | 32637:9008-9027 | MS.gene011731:intergenic | 40.0% | |
| ACCTGGTCAAATATAGCTGT+TGG | + | 32637:11825-11844 | MS.gene011731:intergenic | 40.0% | |
| ACTATTAACATCTGCCACAG+GGG | + | 32637:9198-9217 | MS.gene011731:intergenic | 40.0% | |
| AGAGGAAGTTTCTGTTCACA+TGG | + | 32637:9149-9168 | MS.gene011731:intergenic | 40.0% | |
| AGGAACTACCTCTTCACAAT+AGG | - | 32637:8144-8163 | MS.gene011731:CDS | 40.0% | |
| AGGGACAACAAGATAGTAGA+AGG | + | 32637:11743-11762 | MS.gene011731:intergenic | 40.0% | |
| ATACCAGGATGTGTTATACC+TGG | + | 32637:10471-10490 | MS.gene011731:intergenic | 40.0% | |
| CAAACATTGTCACAACTCAC+GGG | + | 32637:9379-9398 | MS.gene011731:intergenic | 40.0% | |
| CAATGTTGCACAAGCATTAG+GGG | + | 32637:11796-11815 | MS.gene011731:intergenic | 40.0% | |
| CAATTCTTATTGGCCCACTA+AGG | + | 32637:9941-9960 | MS.gene011731:intergenic | 40.0% | |
| CACTATTAACATCTGCCACA+GGG | + | 32637:9199-9218 | MS.gene011731:intergenic | 40.0% | |
| CCAATGTTGCACAAGCATTA+GGG | + | 32637:11797-11816 | MS.gene011731:intergenic | 40.0% | |
| CCAGATATTCTTCCTTCACA+GGG | + | 32637:11762-11781 | MS.gene011731:intergenic | 40.0% | |
| CCCTTTCGTTCCATATGTTT+AGG | + | 32637:10521-10540 | MS.gene011731:intergenic | 40.0% | |
| CCTGGTCAAATATAGCTGTT+GGG | + | 32637:11824-11843 | MS.gene011731:intergenic | 40.0% | |
| CTCCTTCTACAAAAACAGGA+AGG | + | 32637:10950-10969 | MS.gene011731:intergenic | 40.0% | |
| CTTATGCCACAAAAGCTATC+TGG | - | 32637:10105-10124 | MS.gene011731:CDS | 40.0% | |
| GAAAACATTTGGCCCATGTT+TGG | + | 32637:9588-9607 | MS.gene011731:intergenic | 40.0% | |
| GAATCTAAGCAGAGGTTCAA+AGG | - | 32637:10920-10939 | MS.gene011731:intron | 40.0% | |
| GCATTAGTGTGGATGAAAGT+GGG | - | 32637:11287-11306 | MS.gene011731:intron | 40.0% | |
| GGCTTCTTCTTTAAGTCTAC+GGG | + | 32637:8116-8135 | MS.gene011731:intergenic | 40.0% | |
| GGTGTATTAGTCCTTTAACC+TGG | + | 32637:10167-10186 | MS.gene011731:intergenic | 40.0% | |
| GTAGAAATGGTAGATTGGAC+TGG | - | 32637:9233-9252 | MS.gene011731:CDS | 40.0% | |
| GTCAAATATAGCTGTTGGGA+TGG | + | 32637:11820-11839 | MS.gene011731:intergenic | 40.0% | |
| GTTTGGCTACTCAAAAGAAC+AGG | - | 32637:11381-11400 | MS.gene011731:intron | 40.0% | |
| TCAGAGTGGTTAGTGTTTGA+GGG | - | 32637:11265-11284 | MS.gene011731:intron | 40.0% | |
| TCCAGATATTCTTCCTTCAC+AGG | + | 32637:11763-11782 | MS.gene011731:intergenic | 40.0% | |
| TCTGAGAATCTTGGTTCAAC+GGG | + | 32637:11250-11269 | MS.gene011731:intergenic | 40.0% | |
| TGGGCAAAAACATGTATGCT+TGG | + | 32637:11431-11450 | MS.gene011731:intergenic | 40.0% | |
| TGTATGCAACACTTGCATCT+AGG | + | 32637:11324-11343 | MS.gene011731:intergenic | 40.0% | |
| TGTGGTGCAATAGAAATGAG+TGG | - | 32637:11026-11045 | MS.gene011731:intron | 40.0% | |
| TTCAACTGCAAGCAAATCTC+CGG | + | 32637:9991-10010 | MS.gene011731:intergenic | 40.0% | |
| TTGAACCAAGATTCTCAGAG+TGG | - | 32637:11251-11270 | MS.gene011731:intron | 40.0% | |
| TTTCCAGGTATAACACATCC+TGG | - | 32637:10465-10484 | MS.gene011731:intron | 40.0% | |
| TTTGACAGAGAAAATGGAGG+TGG | - | 32637:10062-10081 | MS.gene011731:CDS | 40.0% | |
| ! | AAGTGACTTGTCCACTTATC+AGG | + | 32637:9751-9770 | MS.gene011731:intergenic | 40.0% |
| ! | ACTAACCACTCTGAGAATCT+TGG | + | 32637:11259-11278 | MS.gene011731:intergenic | 40.0% |
| ! | ATCTGGTTTCTTTACAAGGC+GGG | + | 32637:12069-12088 | MS.gene011731:intergenic | 40.0% |
| ! | CAGATAGCTTTTGTGGCATA+AGG | + | 32637:10107-10126 | MS.gene011731:intergenic | 40.0% |
| ! | CATCTGGTTTCTTTACAAGG+CGG | + | 32637:12070-12089 | MS.gene011731:intergenic | 40.0% |
| ! | CCGCATTTTCAATCATTCAC+TGG | - | 32637:8912-8931 | MS.gene011731:CDS | 40.0% |
| ! | CTCTGAGAATCTTGGTTCAA+CGG | + | 32637:11251-11270 | MS.gene011731:intergenic | 40.0% |
| ! | TAGTGGGCCAATAAGAATTG+TGG | - | 32637:9941-9960 | MS.gene011731:intron | 40.0% |
| ! | TCTATTGGCACAACTAGTCT+TGG | + | 32637:9113-9132 | MS.gene011731:intergenic | 40.0% |
| ! | TCTGTTGGTAAGTTTGCCAA+GGG | + | 32637:10606-10625 | MS.gene011731:intergenic | 40.0% |
| ! | TTCTGTTGGTAAGTTTGCCA+AGG | + | 32637:10607-10626 | MS.gene011731:intergenic | 40.0% |
| ! | TTTGGCATTACTCTGAGGAA+GGG | + | 32637:9003-9022 | MS.gene011731:intergenic | 40.0% |
| !! | ATGTGGCTTGATGTTTTTGC+AGG | - | 32637:12007-12026 | MS.gene011731:CDS | 40.0% |
| !! | GAAAGAGTACCTTACACCAA+TGG | - | 32637:11183-11202 | MS.gene011731:intron | 40.0% |
| !!! | GGCACTGAGATTTTTTGTGA+TGG | + | 32637:12123-12142 | MS.gene011731:intergenic | 40.0% |
| ACGGGGCCTATCTCAAATAT+TGG | + | 32637:11232-11251 | MS.gene011731:intergenic | 45.0% | |
| AGATATACCTCCAGTTGCAG+AGG | - | 32637:8175-8194 | MS.gene011731:intron | 45.0% | |
| ATACCGGGAAGAGAAAATGG+TGG | - | 32637:10882-10901 | MS.gene011731:intron | 45.0% | |
| CACCTCAGATACCAGGTTAA+AGG | - | 32637:10153-10172 | MS.gene011731:CDS | 45.0% | |
| CCACTATTAACATCTGCCAC+AGG | + | 32637:9200-9219 | MS.gene011731:intergenic | 45.0% | |
| CCCAACAGCTATATTTGACC+AGG | - | 32637:11821-11840 | MS.gene011731:intron | 45.0% | |
| CCCTAATGCTTGTGCAACAT+TGG | - | 32637:11794-11813 | MS.gene011731:intron | 45.0% | |
| CCCTGTGAAGGAAGAATATC+TGG | - | 32637:11759-11778 | MS.gene011731:intron | 45.0% | |
| CCTGTGGCAGATGTTAATAG+TGG | - | 32637:9197-9216 | MS.gene011731:CDS | 45.0% | |
| CGGGGCCTATCTCAAATATT+GGG | + | 32637:11231-11250 | MS.gene011731:intergenic | 45.0% | |
| CTATTAACATCTGCCACAGG+GGG | + | 32637:9197-9216 | MS.gene011731:intergenic | 45.0% | |
| CTCAGAGTGGTTAGTGTTTG+AGG | - | 32637:11264-11283 | MS.gene011731:intron | 45.0% | |
| CTGAGAATCTTGGTTCAACG+GGG | + | 32637:11249-11268 | MS.gene011731:intergenic | 45.0% | |
| GAAGCAGCAAGAACAATACC+GGG | - | 32637:10867-10886 | MS.gene011731:intron | 45.0% | |
| GAAGGAGCTAATCTCAGTAC+AGG | - | 32637:10963-10982 | MS.gene011731:intron | 45.0% | |
| GATGGTGAGGTCTCATTATG+TGG | - | 32637:11008-11027 | MS.gene011731:intron | 45.0% | |
| GCCAATGTTGCACAAGCATT+AGG | + | 32637:11798-11817 | MS.gene011731:intergenic | 45.0% | |
| GCTTATTCACCTCAGATACC+AGG | - | 32637:10146-10165 | MS.gene011731:CDS | 45.0% | |
| GGAAGCAGCAAGAACAATAC+CGG | - | 32637:10866-10885 | MS.gene011731:intron | 45.0% | |
| GGCATTAGTGTGGATGAAAG+TGG | - | 32637:11286-11305 | MS.gene011731:intron | 45.0% | |
| GGTGCAGTTCCTATTATACC+AGG | + | 32637:10486-10505 | MS.gene011731:intergenic | 45.0% | |
| GTCCTTTAACCTGGTATCTG+AGG | + | 32637:10158-10177 | MS.gene011731:intergenic | 45.0% | |
| TACCGGGAAGAGAAAATGGT+GGG | - | 32637:10883-10902 | MS.gene011731:intron | 45.0% | |
| TCAACTGCAAGCAAATCTCC+GGG | + | 32637:9990-10009 | MS.gene011731:intergenic | 45.0% | |
| TCAGTCTCTCAAACTATGCG+AGG | - | 32637:10566-10585 | MS.gene011731:intron | 45.0% | |
| TCGACAAAGTCGGTGAATAC+TGG | + | 32637:8623-8642 | MS.gene011731:intergenic | 45.0% | |
| TTAGTGTGGATGAAAGTGGG+AGG | - | 32637:11290-11309 | MS.gene011731:intron | 45.0% | |
| TTATTGGCCCACTAAGGTGA+TGG | + | 32637:9935-9954 | MS.gene011731:intergenic | 45.0% | |
| ! | CTATCTTGTTGTCCCTGTGA+AGG | - | 32637:11747-11766 | MS.gene011731:intron | 45.0% |
| ! | GAAATGGTAGATTGGACTGG+AGG | - | 32637:9236-9255 | MS.gene011731:CDS | 45.0% |
| ! | GGGTGCCATCTATTATGAAG+AGG | + | 32637:9167-9186 | MS.gene011731:intergenic | 45.0% |
| ! | GTTTGGCATTACTCTGAGGA+AGG | + | 32637:9004-9023 | MS.gene011731:intergenic | 45.0% |
| ! | TCTGCAACTGGAGGTATATC+TGG | + | 32637:8176-8195 | MS.gene011731:intergenic | 45.0% |
| ! | TCTGGTTTCTTTACAAGGCG+GGG | + | 32637:12068-12087 | MS.gene011731:intergenic | 45.0% |
| ! | TTCCCACCATTTTCTCTTCC+CGG | + | 32637:10888-10907 | MS.gene011731:intergenic | 45.0% |
| ! | TTGGCATTACTCTGAGGAAG+GGG | + | 32637:9002-9021 | MS.gene011731:intergenic | 45.0% |
| !! | ACAACTAGTCTTGGAGTTGG+AGG | + | 32637:9104-9123 | MS.gene011731:intergenic | 45.0% |
| !! | AGTGTTTGAGGGCATTAGTG+TGG | - | 32637:11276-11295 | MS.gene011731:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAACTA+TGG | - | 32637:11683-11702 | MS.gene011731:intron | 5.0% |
| AAAGAAGAAGCCATGGGAGC+AGG | - | 32637:8124-8143 | MS.gene011731:CDS | 50.0% | |
| AGGTGACATGCACTTCTCAC+AGG | - | 32637:10983-11002 | MS.gene011731:intron | 50.0% | |
| ATATGTGGTCCTTCCACCAG+TGG | - | 32637:8967-8986 | MS.gene011731:CDS | 50.0% | |
| ATGCACTTCTCACAGGGTGA+TGG | - | 32637:10990-11009 | MS.gene011731:intron | 50.0% | |
| GGATGCCACCTATTGTGAAG+AGG | + | 32637:8155-8174 | MS.gene011731:intergenic | 50.0% | |
| GGTGACATGCACTTCTCACA+GGG | - | 32637:10984-11003 | MS.gene011731:intron | 50.0% | |
| TCCTTCCACCAGTGGAAAAC+CGG | - | 32637:8975-8994 | MS.gene011731:CDS | 50.0% | |
| TGAAGCCCCATTCATCACCA+GGG | + | 32637:10034-10053 | MS.gene011731:intergenic | 50.0% | |
| TGGATAGGAGTGAGGTTTCC+AGG | - | 32637:10450-10469 | MS.gene011731:intron | 50.0% | |
| ! | ATTACTCTGAGGAAGGGGAC+CGG | + | 32637:8997-9016 | MS.gene011731:intergenic | 50.0% |
| ! | GGTTTTGCATAGCAGACCCT+TGG | - | 32637:10587-10606 | MS.gene011731:intron | 50.0% |
| ! | TCCTCTCCCTGGTGATGAAT+GGG | - | 32637:10025-10044 | MS.gene011731:intron | 50.0% |
| !! | GGCACAACTAGTCTTGGAGT+TGG | + | 32637:9107-9126 | MS.gene011731:intergenic | 50.0% |
| AGAGGTAGTTCCTGCTCCCA+TGG | + | 32637:8137-8156 | MS.gene011731:intergenic | 55.0% | |
| CCAGTTGCAGAGGCTACAAC+TGG | - | 32637:8185-8204 | MS.gene011731:intron | 55.0% | |
| CCAGTTGTAGCCTCTGCAAC+TGG | + | 32637:8188-8207 | MS.gene011731:intergenic | 55.0% | |
| GCCAGGTCCATCACCTTAGT+GGG | - | 32637:9925-9944 | MS.gene011731:intron | 55.0% | |
| GGGTTGACATGAAGGGGAGT+GGG | + | 32637:11211-11230 | MS.gene011731:intergenic | 55.0% | |
| GGTTGACATGAAGGGGAGTG+GGG | + | 32637:11210-11229 | MS.gene011731:intergenic | 55.0% | |
| GTGAAGCCCCATTCATCACC+AGG | + | 32637:10035-10054 | MS.gene011731:intergenic | 55.0% | |
| GTTGTAGCCTCTGCAACTGG+AGG | + | 32637:8185-8204 | MS.gene011731:intergenic | 55.0% | |
| TGCAAGCAAATCTCCGGGCT+GGG | + | 32637:9985-10004 | MS.gene011731:intergenic | 55.0% | |
| TTTACAAGGCGGGGTCCAAC+TGG | + | 32637:12059-12078 | MS.gene011731:intergenic | 55.0% | |
| ! | CCTCTCCCTGGTGATGAATG+GGG | - | 32637:10026-10045 | MS.gene011731:intron | 55.0% |
| ! | CTTCTCACAGGGTGATGGTG+AGG | - | 32637:10995-11014 | MS.gene011731:intron | 55.0% |
| ! | GTCCTCTCCCTGGTGATGAA+TGG | - | 32637:10024-10043 | MS.gene011731:intron | 55.0% |
| ! | TGGGTTGACATGAAGGGGAG+TGG | + | 32637:11212-11231 | MS.gene011731:intergenic | 55.0% |
| !! | ACCGGTTTTCCACTGGTGGA+AGG | + | 32637:8979-8998 | MS.gene011731:intergenic | 55.0% |
| !! | TCTTGGAGTTGGAGGTGCCA+TGG | + | 32637:9096-9115 | MS.gene011731:intergenic | 55.0% |
| CCCCATTCATCACCAGGGAG+AGG | + | 32637:10029-10048 | MS.gene011731:intergenic | 60.0% | |
| CTGCAAGCAAATCTCCGGGC+TGG | + | 32637:9986-10005 | MS.gene011731:intergenic | 60.0% | |
| GAGTGGGGCCCATTGGTGTA+AGG | + | 32637:11195-11214 | MS.gene011731:intergenic | 60.0% | |
| GGCCAGGTCCATCACCTTAG+TGG | - | 32637:9924-9943 | MS.gene011731:intron | 60.0% | |
| TGCAACTTGGGTCCTCTCCC+TGG | - | 32637:10014-10033 | MS.gene011731:intron | 60.0% | |
| ! | CTGCCACAGGGGGTATGTCA+GGG | + | 32637:9187-9206 | MS.gene011731:intergenic | 60.0% |
| ! | TCTGCCACAGGGGGTATGTC+AGG | + | 32637:9188-9207 | MS.gene011731:intergenic | 60.0% |
| !! | GAAGGGGACCGGTTTTCCAC+TGG | + | 32637:8986-9005 | MS.gene011731:intergenic | 60.0% |
| !! | GCCCACTAAGGTGATGGACC+TGG | + | 32637:9929-9948 | MS.gene011731:intergenic | 60.0% |
| !! | GGATGATGGGGAAATGGGCC+AGG | - | 32637:9908-9927 | MS.gene011731:intron | 60.0% |
| GATGGTATCCCAGCCCAGCC+CGG | - | 32637:9969-9988 | MS.gene011731:intron | 65.0% | |
| GCACCCTGACATACCCCCTG+TGG | - | 32637:9181-9200 | MS.gene011731:CDS | 65.0% | |
| TGAAGGGGAGTGGGGCCCAT+TGG | + | 32637:11202-11221 | MS.gene011731:intergenic | 65.0% | |
| ! | AGCAAATCTCCGGGCTGGGC+TGG | + | 32637:9981-10000 | MS.gene011731:intergenic | 65.0% |
| ! | GCAAATCTCCGGGCTGGGCT+GGG | + | 32637:9980-9999 | MS.gene011731:intergenic | 65.0% |
| !! | GGGGACCGGTTTTCCACTGG+TGG | + | 32637:8983-9002 | MS.gene011731:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32637 | gene | 8053 | 12151 | 8053 | ID=MS.gene011731 |
| 32637 | mRNA | 8053 | 12151 | 8053 | ID=MS.gene011731.t1;Parent=MS.gene011731 |
| 32637 | exon | 11903 | 12151 | 11903 | ID=MS.gene011731.t1.exon1;Parent=MS.gene011731.t1 |
| 32637 | CDS | 11903 | 12151 | 11903 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 10037 | 10274 | 10037 | ID=MS.gene011731.t1.exon2;Parent=MS.gene011731.t1 |
| 32637 | CDS | 10037 | 10274 | 10037 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 9557 | 9747 | 9557 | ID=MS.gene011731.t1.exon3;Parent=MS.gene011731.t1 |
| 32637 | CDS | 9557 | 9747 | 9557 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 9141 | 9376 | 9141 | ID=MS.gene011731.t1.exon4;Parent=MS.gene011731.t1 |
| 32637 | CDS | 9141 | 9376 | 9141 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 8802 | 9045 | 8802 | ID=MS.gene011731.t1.exon5;Parent=MS.gene011731.t1 |
| 32637 | CDS | 8802 | 9045 | 8802 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 8362 | 8469 | 8362 | ID=MS.gene011731.t1.exon6;Parent=MS.gene011731.t1 |
| 32637 | CDS | 8362 | 8469 | 8362 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| 32637 | exon | 8053 | 8175 | 8053 | ID=MS.gene011731.t1.exon7;Parent=MS.gene011731.t1 |
| 32637 | CDS | 8053 | 8175 | 8053 | ID=cds.MS.gene011731.t1;Parent=MS.gene011731.t1 |
| Gene Sequence |
| Protein sequence |
