Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012242.t1 | XP_013458443.1 | 96.6 | 119 | 4 | 0 | 83 | 201 | 4 | 122 | 9.40E-63 | 250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012242.t1 | I3SLJ0 | 96.6 | 119 | 4 | 0 | 83 | 201 | 4 | 122 | 6.8e-63 | 250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051831 | MS.gene012242 | PPI |
| MS.gene24849 | MS.gene012242 | PPI |
| MS.gene012242 | MS.gene25687 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012242.t1 | MTR_4g125770 | 96.639 | 119 | 4 | 0 | 83 | 201 | 4 | 122 | 7.15e-86 | 250 |
| MS.gene012242.t1 | MTR_4g125770 | 94.118 | 119 | 4 | 1 | 83 | 201 | 4 | 119 | 2.02e-81 | 239 |
| MS.gene012242.t1 | MTR_4g125770 | 97.590 | 83 | 2 | 0 | 119 | 201 | 3 | 85 | 2.84e-59 | 181 |
| MS.gene012242.t1 | MTR_8g018810 | 74.603 | 63 | 16 | 0 | 130 | 192 | 8 | 70 | 5.18e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012242.t1 | AT4G26060 | 60.577 | 104 | 39 | 1 | 97 | 200 | 14 | 115 | 2.58e-42 | 139 |
| MS.gene012242.t1 | AT5G57060 | 51.695 | 118 | 52 | 2 | 86 | 200 | 1 | 116 | 8.75e-38 | 127 |
| MS.gene012242.t1 | AT5G57060 | 51.695 | 118 | 52 | 2 | 86 | 200 | 1 | 116 | 8.75e-38 | 127 |
| MS.gene012242.t1 | AT5G57060 | 51.695 | 118 | 52 | 2 | 86 | 200 | 1 | 116 | 8.75e-38 | 127 |
| MS.gene012242.t1 | AT5G57060 | 51.695 | 118 | 52 | 2 | 86 | 200 | 1 | 116 | 8.75e-38 | 127 |
| MS.gene012242.t1 | AT5G57060 | 51.695 | 118 | 52 | 2 | 86 | 200 | 1 | 116 | 8.75e-38 | 127 |
| MS.gene012242.t1 | AT5G57060 | 70.130 | 77 | 23 | 0 | 124 | 200 | 13 | 89 | 2.15e-37 | 126 |
| MS.gene012242.t1 | AT5G57060 | 70.130 | 77 | 23 | 0 | 124 | 200 | 13 | 89 | 2.15e-37 | 126 |
| MS.gene012242.t1 | AT5G57060 | 70.130 | 77 | 23 | 0 | 124 | 200 | 49 | 125 | 3.34e-37 | 126 |
| MS.gene012242.t1 | AT5G57060 | 70.130 | 77 | 23 | 0 | 124 | 200 | 49 | 125 | 3.34e-37 | 126 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 11 | 74 | 8.81e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 11 | 74 | 8.81e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
| MS.gene012242.t1 | AT1G54217 | 62.500 | 64 | 23 | 1 | 130 | 192 | 10 | 73 | 8.95e-22 | 85.9 |
Find 57 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCAACAATTCTCTATTT+TGG | 0.056794 | 8.1:+6241891 | MS.gene012242:CDS |
| CTGCTGCTGAGTTTGCCATT+TGG | 0.196457 | 8.1:-6236668 | None:intergenic |
| TGCTGCTGAGTTTGCCATTT+GGG | 0.209435 | 8.1:-6236667 | None:intergenic |
| TAATTTAGATTTATGCAAAT+TGG | 0.243092 | 8.1:+6236637 | None:intergenic |
| CCCCAGGGAACGGGCGGGGC+TGG | 0.245034 | 8.1:+6241932 | MS.gene012242:CDS |
| TCCCAGCCCCGCCCGTTCCC+TGG | 0.253175 | 8.1:-6241934 | None:intergenic |
| CCCAGCCCCGCCCGTTCCCT+GGG | 0.307231 | 8.1:-6241933 | None:intergenic |
| CCCAGGGAACGGGCGGGGCT+GGG | 0.312102 | 8.1:+6241933 | MS.gene012242:CDS |
| CCATGCTTTGGATGCGGAAT+TGG | 0.323771 | 8.1:+6241736 | MS.gene012242:CDS |
| GCAGCAGCAGCGGTCATTGC+CGG | 0.334404 | 8.1:+6236684 | MS.gene012242:CDS |
| GTCCTCTGGATCTCTAATTA+AGG | 0.363548 | 8.1:-6241683 | None:intergenic |
| GAAGGACCCCAGGGAACGGG+CGG | 0.380252 | 8.1:+6241926 | MS.gene012242:CDS |
| GATAAGCCCCTCCCATGCTT+TGG | 0.389734 | 8.1:+6241724 | MS.gene012242:CDS |
| TCGGAAGGACCCCAGGGAAC+GGG | 0.392848 | 8.1:+6241923 | MS.gene012242:CDS |
| AAATTGGTCCTTTGCCCAAA+TGG | 0.403763 | 8.1:+6236653 | MS.gene012242:CDS |
| AGGACCCCAGGGAACGGGCG+GGG | 0.417190 | 8.1:+6241928 | MS.gene012242:CDS |
| ATCAAAATTCTTAAAAGAAA+CGG | 0.429179 | 8.1:-6239317 | None:intergenic |
| CGGTCATTGCCGGCAACAAT+TGG | 0.434578 | 8.1:+6236694 | MS.gene012242:CDS |
| TTTAAGAAAGGGCGTGGAAT+CGG | 0.452413 | 8.1:+6239288 | MS.gene012242:CDS |
| TTTCCCTTTCCGTGAGCCAT+TGG | 0.452477 | 8.1:-6241655 | None:intergenic |
| GATCCAGAGGACTTCCAGTC+AGG | 0.454913 | 8.1:+6241694 | MS.gene012242:CDS |
| AGAGAATGTTGATTTAAGAA+AGG | 0.460736 | 8.1:+6239276 | MS.gene012242:CDS |
| ATCATTATCGGAAGGACCCC+AGG | 0.469804 | 8.1:+6241916 | MS.gene012242:CDS |
| GATCCAATGGCTCACGGAAA+GGG | 0.471290 | 8.1:+6241652 | MS.gene012242:CDS |
| GAGAATGTTGATTTAAGAAA+GGG | 0.481994 | 8.1:+6239277 | MS.gene012242:CDS |
| GATTTATTTGCCCTCCTATG+TGG | 0.489666 | 8.1:+6241865 | MS.gene012242:CDS |
| TGTTGATTTAAGAAAGGGCG+TGG | 0.497594 | 8.1:+6239282 | MS.gene012242:CDS |
| CTTTGTTGTTGCAGATGGTA+GGG | 0.498784 | 8.1:+6239249 | MS.gene012242:intron |
| AGTCCTGACTGGAAGTCCTC+TGG | 0.502119 | 8.1:-6241697 | None:intergenic |
| CCTTTGTTGTTGCAGATGGT+AGG | 0.504377 | 8.1:+6239248 | MS.gene012242:intron |
| TGAGTTTGCCATTTGGGCAA+AGG | 0.510884 | 8.1:-6236661 | None:intergenic |
| AAGGACCCCAGGGAACGGGC+GGG | 0.511815 | 8.1:+6241927 | MS.gene012242:CDS |
| CCAATTCCGCATCCAAAGCA+TGG | 0.518285 | 8.1:-6241736 | None:intergenic |
| ATCGGAAGGACCCCAGGGAA+CGG | 0.537686 | 8.1:+6241922 | MS.gene012242:CDS |
| CTTTATGTGGCAGGACAAGC+AGG | 0.542559 | 8.1:+6241628 | MS.gene012242:intron |
| CCCCTCCCATGCTTTGGATG+CGG | 0.543713 | 8.1:+6241730 | MS.gene012242:CDS |
| CTTGAATTACTCCGAGCAAA+GGG | 0.545855 | 8.1:-6239349 | None:intergenic |
| TTCCGCATCCAAAGCATGGG+AGG | 0.555498 | 8.1:-6241732 | None:intergenic |
| TCTTGAATTACTCCGAGCAA+AGG | 0.556216 | 8.1:-6239350 | None:intergenic |
| AGATCCAATGGCTCACGGAA+AGG | 0.578977 | 8.1:+6241651 | MS.gene012242:CDS |
| GCTTATCATAAAGTCCTGAC+TGG | 0.578995 | 8.1:-6241708 | None:intergenic |
| TCCGCATCCAAAGCATGGGA+GGG | 0.588988 | 8.1:-6241731 | None:intergenic |
| GCTTTGGATGCGGAATTGGA+TGG | 0.591155 | 8.1:+6241740 | MS.gene012242:CDS |
| CAATTCCGCATCCAAAGCAT+GGG | 0.593569 | 8.1:-6241735 | None:intergenic |
| GTTGCATAGAACCACATAGG+AGG | 0.594452 | 8.1:-6241876 | None:intergenic |
| GGCAAACTCAGCAGCAGCAG+CGG | 0.605297 | 8.1:+6236674 | MS.gene012242:CDS |
| CCGCATCCAAAGCATGGGAG+GGG | 0.606480 | 8.1:-6241730 | None:intergenic |
| AGGACAAGCAGGAGATCCAA+TGG | 0.609106 | 8.1:+6241639 | MS.gene012242:intron |
| TGCCTTAATTAGAGATCCAG+AGG | 0.616154 | 8.1:+6241681 | MS.gene012242:CDS |
| TTGCATAGAACCACATAGGA+GGG | 0.616476 | 8.1:-6241875 | None:intergenic |
| ATTGTTGCATAGAACCACAT+AGG | 0.645975 | 8.1:-6241879 | None:intergenic |
| TCATTATCGGAAGGACCCCA+GGG | 0.659027 | 8.1:+6241917 | MS.gene012242:CDS |
| GCAGGAGATCCAATGGCTCA+CGG | 0.665431 | 8.1:+6241646 | MS.gene012242:CDS |
| TGTTGTTGCAGATGGTAGGG+TGG | 0.672021 | 8.1:+6239252 | MS.gene012242:intron |
| AGAGATTACAGCAATTGCAG+AGG | 0.673672 | 8.1:-6241958 | None:intergenic |
| CCAGCCCCGCCCGTTCCCTG+GGG | 0.674263 | 8.1:-6241932 | None:intergenic |
| TTTGCTCGGAGTAATTCAAG+AGG | 0.694585 | 8.1:+6239352 | MS.gene012242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAATAAAATAAAAT+AGG | - | chr8.1:6239428-6239447 | None:intergenic | 0.0% |
| !!! | TTTATTTTTTTTAATTATAT+TGG | - | chr8.1:6237110-6237129 | None:intergenic | 0.0% |
| !! | AAATAAAATAAAATAGGTAA+TGG | - | chr8.1:6239422-6239441 | None:intergenic | 10.0% |
| !! | ATAATATAATATGTTTCTTA+TGG | + | chr8.1:6238909-6238928 | MS.gene012242:intron | 10.0% |
| !! | TAAATCATAAAAATAATTGT+TGG | - | chr8.1:6240344-6240363 | None:intergenic | 10.0% |
| !! | TTAAAAAAAATAAAAACAAG+AGG | + | chr8.1:6237116-6237135 | MS.gene012242:intron | 10.0% |
| !!! | GATTTTTTTTTTTTTTGAAA+CGG | - | chr8.1:6239593-6239612 | None:intergenic | 10.0% |
| !!! | TAATTTTCGTTTTTATTTTT+GGG | - | chr8.1:6241186-6241205 | None:intergenic | 10.0% |
| !!! | TTATTATATTAGTTTTTGTA+AGG | - | chr8.1:6237211-6237230 | None:intergenic | 10.0% |
| !!! | TTTTGTAAGAAAAATAAAAT+TGG | - | chr8.1:6241549-6241568 | None:intergenic | 10.0% |
| !! | ATATATTCTACTATAAATAG+AGG | + | chr8.1:6240282-6240301 | MS.gene012242:intron | 15.0% |
| !! | ATCAAAATTCTTAAAAGAAA+CGG | - | chr8.1:6239320-6239339 | None:intergenic | 15.0% |
| !! | CATATTAAAATGATGAAAAT+TGG | + | chr8.1:6241206-6241225 | MS.gene012242:intron | 15.0% |
| !! | GAATTCAAACATTAATTTAT+CGG | - | chr8.1:6237586-6237605 | None:intergenic | 15.0% |
| !! | TAACTGAATATAAATTGTAA+TGG | - | chr8.1:6236901-6236920 | None:intergenic | 15.0% |
| !! | TAATCTGTATAATAAATACT+AGG | - | chr8.1:6239620-6239639 | None:intergenic | 15.0% |
| !! | TACAAATTAAATCAATGATT+TGG | + | chr8.1:6237310-6237329 | MS.gene012242:intron | 15.0% |
| !! | TTATTATGTTATAAGCAAAA+CGG | - | chr8.1:6238021-6238040 | None:intergenic | 15.0% |
| !! | TTTCAGACTAATAAAAAAAA+GGG | - | chr8.1:6236722-6236741 | None:intergenic | 15.0% |
| !!! | AATTGCTTAATTAAGATTTT+TGG | + | chr8.1:6238255-6238274 | MS.gene012242:intron | 15.0% |
| !!! | AATTTCTTATTTTTACTCTT+TGG | - | chr8.1:6237852-6237871 | None:intergenic | 15.0% |
| !!! | ATTGCTTAATTAAGATTTTT+GGG | + | chr8.1:6238256-6238275 | MS.gene012242:intron | 15.0% |
| !!! | ATTTTATATGCTATTAACTT+GGG | + | chr8.1:6237401-6237420 | MS.gene012242:intron | 15.0% |
| !!! | CAAAACTATTTTATCAAATT+TGG | + | chr8.1:6240371-6240390 | MS.gene012242:intron | 15.0% |
| !!! | GTAATTTTCGTTTTTATTTT+TGG | - | chr8.1:6241187-6241206 | None:intergenic | 15.0% |
| !!! | TTAAGAATTTTGATCTTTTA+AGG | + | chr8.1:6239326-6239345 | MS.gene012242:CDS | 15.0% |
| !! | AAAAACTGAGTCAAATAAAA+AGG | + | chr8.1:6236867-6236886 | MS.gene012242:CDS | 20.0% |
| !! | AAATCCTAATATTCACTATT+AGG | + | chr8.1:6240202-6240221 | MS.gene012242:intron | 20.0% |
| !! | ACTTAAGTAGAAAAATCATA+TGG | - | chr8.1:6239397-6239416 | None:intergenic | 20.0% |
| !! | AGTAATATGCTAATGATTTA+TGG | + | chr8.1:6241460-6241479 | MS.gene012242:intron | 20.0% |
| !! | ATGTTTATTACCTAGAAAAT+AGG | + | chr8.1:6241056-6241075 | MS.gene012242:intron | 20.0% |
| !! | ATTCATCTATATCGATATAA+TGG | - | chr8.1:6241358-6241377 | None:intergenic | 20.0% |
| !! | ATTTGTAATTTATTACATGG+AGG | - | chr8.1:6238952-6238971 | None:intergenic | 20.0% |
| !! | CAAAAAATAGATTTAGAAGA+AGG | + | chr8.1:6237540-6237559 | MS.gene012242:intron | 20.0% |
| !! | CTAATTAGTTAATGATTACT+TGG | - | chr8.1:6237715-6237734 | None:intergenic | 20.0% |
| !! | GTTTCAGACTAATAAAAAAA+AGG | - | chr8.1:6236723-6236742 | None:intergenic | 20.0% |
| !! | TAATAGTGAATATTAGGATT+TGG | - | chr8.1:6240203-6240222 | None:intergenic | 20.0% |
| !! | TAATCCTAATAGTGAATATT+AGG | - | chr8.1:6240209-6240228 | None:intergenic | 20.0% |
| !! | TAGAATTATAGATTAGGATT+TGG | + | chr8.1:6240227-6240246 | MS.gene012242:intron | 20.0% |
| !! | TAGGATTAGAATTATAGATT+AGG | + | chr8.1:6240221-6240240 | MS.gene012242:intron | 20.0% |
| !! | TAGTTTATCATTATTTGGAT+TGG | + | chr8.1:6239161-6239180 | MS.gene012242:intron | 20.0% |
| !! | TCAATTTGCAATTATATCAT+TGG | + | chr8.1:6239675-6239694 | MS.gene012242:intron | 20.0% |
| !! | TCCATGTAATAAATTACAAA+TGG | + | chr8.1:6238951-6238970 | MS.gene012242:intron | 20.0% |
| !! | TCCATTTGTAATTTATTACA+TGG | - | chr8.1:6238955-6238974 | None:intergenic | 20.0% |
| !! | TGTAATAAATTACAAATGGA+AGG | + | chr8.1:6238955-6238974 | MS.gene012242:intron | 20.0% |
| !! | TTCAGACTAATAAAAAAAAG+GGG | - | chr8.1:6236721-6236740 | None:intergenic | 20.0% |
| !! | TTTAATACTAGGATTTGATT+AGG | - | chr8.1:6239565-6239584 | None:intergenic | 20.0% |
| !!! | AATTCGAAAAATGAGTATTT+TGG | + | chr8.1:6237347-6237366 | MS.gene012242:intron | 20.0% |
| !!! | ATACTGTTTTATTCTCAATT+TGG | + | chr8.1:6238192-6238211 | MS.gene012242:intron | 20.0% |
| !!! | CATTTTATATGCTATTAACT+TGG | + | chr8.1:6237400-6237419 | MS.gene012242:intron | 20.0% |
| !!! | CGTTTTAAAAACAAAACAAT+CGG | - | chr8.1:6237885-6237904 | None:intergenic | 20.0% |
| !!! | TTAAATTGCAGATTTCTTTT+TGG | + | chr8.1:6241843-6241862 | MS.gene012242:intron | 20.0% |
| !!! | TTGTCATGTGAATTTTTTAT+AGG | + | chr8.1:6241243-6241262 | MS.gene012242:intron | 20.0% |
| !!! | TTTTTAAAACGTAAAGAGAA+GGG | + | chr8.1:6237894-6237913 | MS.gene012242:intron | 20.0% |
| ! | AAACGGCAAAATTTAATACT+AGG | - | chr8.1:6239576-6239595 | None:intergenic | 25.0% |
| ! | AACATCTATGCAAATTAATC+AGG | - | chr8.1:6238603-6238622 | None:intergenic | 25.0% |
| ! | AACTATTAGGAAAGATTTAG+AGG | - | chr8.1:6240640-6240659 | None:intergenic | 25.0% |
| ! | AATAAATTACAAATGGAAGG+AGG | + | chr8.1:6238958-6238977 | MS.gene012242:intron | 25.0% |
| ! | ACAGATTAGAATCATAGATT+AGG | + | chr8.1:6239632-6239651 | MS.gene012242:intron | 25.0% |
| ! | AGAATAGACTCATTAAATAC+TGG | + | chr8.1:6241514-6241533 | MS.gene012242:intron | 25.0% |
| ! | AGACTATAAGAGAAACTATT+AGG | - | chr8.1:6240653-6240672 | None:intergenic | 25.0% |
| ! | ATATGAATATTACTCTAAGC+TGG | - | chr8.1:6237608-6237627 | None:intergenic | 25.0% |
| ! | ATTACTAGTATTTCAATCCT+AGG | - | chr8.1:6240993-6241012 | None:intergenic | 25.0% |
| ! | CATTGTATTTGATAAATGCA+TGG | - | chr8.1:6241028-6241047 | None:intergenic | 25.0% |
| ! | CTTTCATCAATTATACAAAG+AGG | - | chr8.1:6240739-6240758 | None:intergenic | 25.0% |
| ! | GAGAGAAAATTCATCAAAAA+AGG | - | chr8.1:6239778-6239797 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr8.1:6240600-6240619 | MS.gene012242:intron | 25.0% |
| ! | TAGAGAAAATACAAACAACA+AGG | - | chr8.1:6240105-6240124 | None:intergenic | 25.0% |
| ! | TATAGATTAGGATTTGGATT+AGG | + | chr8.1:6240233-6240252 | MS.gene012242:intron | 25.0% |
| ! | TATATTATGAAACTCTCACA+TGG | - | chr8.1:6238897-6238916 | None:intergenic | 25.0% |
| ! | TCAGACTAATAAAAAAAAGG+GGG | - | chr8.1:6236720-6236739 | None:intergenic | 25.0% |
| ! | TGAATTGTTCAAATAACACT+CGG | - | chr8.1:6238512-6238531 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr8.1:6240596-6240615 | None:intergenic | 25.0% |
| ! | TTATGATGCAACAATTACAA+AGG | - | chr8.1:6240706-6240725 | None:intergenic | 25.0% |
| ! | TTCCATTTGAAAATGCTTAA+TGG | - | chr8.1:6239225-6239244 | None:intergenic | 25.0% |
| ! | TTTATCAAATTTGGCTAAAC+TGG | + | chr8.1:6240380-6240399 | MS.gene012242:intron | 25.0% |
| !! | ATGATTTGATTGATTTCTGA+AGG | + | chr8.1:6238345-6238364 | MS.gene012242:intron | 25.0% |
| !! | ATGCAACAATTCTCTATTTT+GGG | + | chr8.1:6241892-6241911 | MS.gene012242:CDS | 25.0% |
| !! | GATGAAAATTGGACTTTTAA+TGG | + | chr8.1:6241217-6241236 | MS.gene012242:intron | 25.0% |
| !! | TATATCGATATAATGGAAGT+CGG | - | chr8.1:6241351-6241370 | None:intergenic | 25.0% |
| !! | TATGCAACAATTCTCTATTT+TGG | + | chr8.1:6241891-6241910 | MS.gene012242:CDS | 25.0% |
| !! | TCTTATTATCTCTTTTCATC+CGG | + | chr8.1:6239839-6239858 | MS.gene012242:intron | 25.0% |
| !! | TGGTCTAGTTTATCATTATT+TGG | + | chr8.1:6239156-6239175 | MS.gene012242:intron | 25.0% |
| !! | TTTGTTATAAGTTCAAAGGT+GGG | - | chr8.1:6237087-6237106 | None:intergenic | 25.0% |
| !!! | AAAATATGTTTTGTTAGCAC+TGG | + | chr8.1:6238713-6238732 | MS.gene012242:intron | 25.0% |
| !!! | ACTTAGTAAGCTTTATTTTG+AGG | + | chr8.1:6240156-6240175 | MS.gene012242:intron | 25.0% |
| !!! | AGAGAATGTTGATTTAAGAA+AGG | + | chr8.1:6239276-6239295 | MS.gene012242:CDS | 25.0% |
| !!! | AGTGTTATTTGAACAATTCA+AGG | + | chr8.1:6238512-6238531 | MS.gene012242:intron | 25.0% |
| !!! | CTACTAGGTTTTAACTTTTA+AGG | + | chr8.1:6238796-6238815 | MS.gene012242:intron | 25.0% |
| !!! | CTTAGTAAGCTTTATTTTGA+GGG | + | chr8.1:6240157-6240176 | MS.gene012242:intron | 25.0% |
| !!! | GAGAATGTTGATTTAAGAAA+GGG | + | chr8.1:6239277-6239296 | MS.gene012242:CDS | 25.0% |
| !!! | GTTTTTAAAACGTAAAGAGA+AGG | + | chr8.1:6237893-6237912 | MS.gene012242:intron | 25.0% |
| !!! | TCACTTTTGTTTGATAACTT+TGG | - | chr8.1:6240838-6240857 | None:intergenic | 25.0% |
| !!! | TCTATTTTGGGAATCATTAT+CGG | + | chr8.1:6241904-6241923 | MS.gene012242:CDS | 25.0% |
| !!! | TTAAGTTTGTTACAATGTGT+TGG | - | chr8.1:6240135-6240154 | None:intergenic | 25.0% |
| !!! | TTAGTAAGCTTTATTTTGAG+GGG | + | chr8.1:6240158-6240177 | MS.gene012242:intron | 25.0% |
| !!! | TTGATTCACTTTTGAAAAAC+AGG | + | chr8.1:6238482-6238501 | MS.gene012242:intron | 25.0% |
| !!! | TTGGTTTGTTATAAGTTCAA+AGG | - | chr8.1:6237091-6237110 | None:intergenic | 25.0% |
| !!! | TTTTCGTTTTTATTTTTGGG+TGG | - | chr8.1:6241183-6241202 | None:intergenic | 25.0% |
| AAGTCATTATAGTTGCTAGT+GGG | - | chr8.1:6241101-6241120 | None:intergenic | 30.0% | |
| AAGTGCAAGTAGTTATTTGA+AGG | - | chr8.1:6241611-6241630 | None:intergenic | 30.0% | |
| AGATCAAAGTCAAAAGACAA+AGG | - | chr8.1:6241389-6241408 | None:intergenic | 30.0% | |
| AGATTTAGAGGTTAATGAGT+TGG | - | chr8.1:6240628-6240647 | None:intergenic | 30.0% | |
| AGTGCAAGTAGTTATTTGAA+GGG | - | chr8.1:6241610-6241629 | None:intergenic | 30.0% | |
| ATAACTACTTGCACTTTATG+TGG | + | chr8.1:6241615-6241634 | MS.gene012242:intron | 30.0% | |
| ATACAATCACATGTTCAACA+TGG | - | chr8.1:6237469-6237488 | None:intergenic | 30.0% | |
| ATCAAAGTCAAAAGACAAAG+GGG | - | chr8.1:6241387-6241406 | None:intergenic | 30.0% | |
| ATCATTTGCACAAAAATGCA+AGG | + | chr8.1:6236777-6236796 | MS.gene012242:CDS | 30.0% | |
| ATTTGATAAATGCATGGTAG+TGG | - | chr8.1:6241022-6241041 | None:intergenic | 30.0% | |
| GATCAAAGTCAAAAGACAAA+GGG | - | chr8.1:6241388-6241407 | None:intergenic | 30.0% | |
| GGATGAAAAGAGATAATAAG+AGG | - | chr8.1:6239840-6239859 | None:intergenic | 30.0% | |
| GGATTTGATTAGGATTGATA+AGG | - | chr8.1:6239555-6239574 | None:intergenic | 30.0% | |
| GTAATTCAAGAGGTAACAAT+AGG | + | chr8.1:6239362-6239381 | MS.gene012242:intron | 30.0% | |
| GTTGTAGTTGTATAGAATGT+GGG | - | chr8.1:6237050-6237069 | None:intergenic | 30.0% | |
| GTTTCTTTCTCTTTCTTTCA+AGG | + | chr8.1:6238078-6238097 | MS.gene012242:intron | 30.0% | |
| TAAGTCATTATAGTTGCTAG+TGG | - | chr8.1:6241102-6241121 | None:intergenic | 30.0% | |
| TCACTATAGCAAAGACAATT+GGG | - | chr8.1:6240045-6240064 | None:intergenic | 30.0% | |
| TCTACAAAATCCATGGATAA+AGG | + | chr8.1:6238552-6238571 | MS.gene012242:intron | 30.0% | |
| TGAGATCAGATATATGCATT+TGG | - | chr8.1:6238376-6238395 | None:intergenic | 30.0% | |
| TGATGTGAATTCAGAAATTG+TGG | + | chr8.1:6239018-6239037 | MS.gene012242:intron | 30.0% | |
| TGTTGTAGTTGTATAGAATG+TGG | - | chr8.1:6237051-6237070 | None:intergenic | 30.0% | |
| TTGAAAATGCTTAATGGAGA+TGG | - | chr8.1:6239219-6239238 | None:intergenic | 30.0% | |
| TTGTTATAAGTTCAAAGGTG+GGG | - | chr8.1:6237086-6237105 | None:intergenic | 30.0% | |
| TTTGATAAATGCATGGTAGT+GGG | - | chr8.1:6241021-6241040 | None:intergenic | 30.0% | |
| ! | CAAAGTATCTACAAAATCCA+TGG | + | chr8.1:6238545-6238564 | MS.gene012242:intron | 30.0% |
| ! | CTCCATTAAGCATTTTCAAA+TGG | + | chr8.1:6239220-6239239 | MS.gene012242:intron | 30.0% |
| ! | GAGATTCTTATTTATAGCCT+AGG | + | chr8.1:6240973-6240992 | MS.gene012242:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr8.1:6240616-6240635 | None:intergenic | 30.0% |
| ! | TGCTATTGAAAGATCGATTT+CGG | + | chr8.1:6237282-6237301 | MS.gene012242:intron | 30.0% |
| !! | GAGTTCTTTCTTTGTTTCTA+CGG | + | chr8.1:6237952-6237971 | MS.gene012242:intron | 30.0% |
| !! | GTTTGTTATAAGTTCAAAGG+TGG | - | chr8.1:6237088-6237107 | None:intergenic | 30.0% |
| !! | TTTGATAACTTTGGTTCTAC+TGG | - | chr8.1:6240829-6240848 | None:intergenic | 30.0% |
| !! | TTTGTTGATTCAAGTCAACA+AGG | + | chr8.1:6238301-6238320 | MS.gene012242:intron | 30.0% |
| !!! | AGTTCTTATTTTGTTAGTGG+AGG | + | chr8.1:6239465-6239484 | MS.gene012242:intron | 30.0% |
| !!! | GTCAGTTCTTATTTTGTTAG+TGG | + | chr8.1:6239462-6239481 | MS.gene012242:intron | 30.0% |
| !!! | GTCTTTTGACTTTGATCTTA+GGG | + | chr8.1:6241391-6241410 | MS.gene012242:intron | 30.0% |
| !!! | TAGTAAGCTTTATTTTGAGG+GGG | + | chr8.1:6240159-6240178 | MS.gene012242:intron | 30.0% |
| !!! | TGTCTTTTGACTTTGATCTT+AGG | + | chr8.1:6241390-6241409 | MS.gene012242:intron | 30.0% |
| AAATTACAAATGGAAGGAGG+AGG | + | chr8.1:6238961-6238980 | MS.gene012242:intron | 35.0% | |
| AGTTCTTAACCCAAGAACAA+AGG | + | chr8.1:6240896-6240915 | MS.gene012242:intron | 35.0% | |
| ATTGTTGCATAGAACCACAT+AGG | - | chr8.1:6241882-6241901 | None:intergenic | 35.0% | |
| CATTTCAGTACCTTTATCCA+TGG | - | chr8.1:6238565-6238584 | None:intergenic | 35.0% | |
| CTGCACATTATCTCTAAACT+AGG | - | chr8.1:6241496-6241515 | None:intergenic | 35.0% | |
| GGGTTAAGAACTTATAGTCT+TGG | - | chr8.1:6240888-6240907 | None:intergenic | 35.0% | |
| GTCACTATAGCAAAGACAAT+TGG | - | chr8.1:6240046-6240065 | None:intergenic | 35.0% | |
| GTTTGTATGATTGAGCTACT+AGG | + | chr8.1:6238781-6238800 | MS.gene012242:intron | 35.0% | |
| TAGAAGCAGCAGATAAATAC+AGG | - | chr8.1:6238426-6238445 | None:intergenic | 35.0% | |
| TCAAAGTCAAAAGACAAAGG+GGG | - | chr8.1:6241386-6241405 | None:intergenic | 35.0% | |
| TGAGCTCTATCAATTGCTAA+AGG | - | chr8.1:6237762-6237781 | None:intergenic | 35.0% | |
| TTAAATGCTAACAACAGCTC+AGG | - | chr8.1:6238850-6238869 | None:intergenic | 35.0% | |
| TTACCTATGCATCGAAATCA+CGG | - | chr8.1:6238694-6238713 | None:intergenic | 35.0% | |
| ! | AATTTTCTCTCTCCTCTACA+AGG | + | chr8.1:6239787-6239806 | MS.gene012242:intron | 35.0% |
| ! | AGAGCTTTTCCTTTGTTCTT+GGG | - | chr8.1:6240908-6240927 | None:intergenic | 35.0% |
| ! | CATGTTAGTGCCTATTTTCT+AGG | - | chr8.1:6241069-6241088 | None:intergenic | 35.0% |
| ! | CTGGTTGAATCAAATTTTCC+CGG | - | chr8.1:6239957-6239976 | None:intergenic | 35.0% |
| ! | TAGAGTGATAAAGCGTTCAA+AGG | - | chr8.1:6239499-6239518 | None:intergenic | 35.0% |
| !! | ACTTATAGTCTTGGTTCTAC+CGG | - | chr8.1:6240879-6240898 | None:intergenic | 35.0% |
| !! | ATTTCCTTTGTTGTTGCAGA+TGG | + | chr8.1:6239244-6239263 | MS.gene012242:intron | 35.0% |
| !! | CTACTTTGAAGCATTTAGAG+AGG | + | chr8.1:6241127-6241146 | MS.gene012242:intron | 35.0% |
| !! | TTTTGGGAATCATTATCGGA+AGG | + | chr8.1:6241908-6241927 | MS.gene012242:CDS | 35.0% |
| !!! | CGTTTCTTCGTTACTTTTTC+TGG | + | chr8.1:6238141-6238160 | MS.gene012242:intron | 35.0% |
| !!! | CTTATTTTGTTAGTGGAGGA+AGG | + | chr8.1:6239469-6239488 | MS.gene012242:intron | 35.0% |
| AAATTGGTCCTTTGCCCAAA+TGG | + | chr8.1:6236653-6236672 | MS.gene012242:CDS | 40.0% | |
| AACAACCAAGCCTTACTAAG+TGG | + | chr8.1:6240545-6240564 | MS.gene012242:intron | 40.0% | |
| AACGTAAAGAGAAGGGAGAA+AGG | + | chr8.1:6237901-6237920 | MS.gene012242:intron | 40.0% | |
| ACAACCAAGCCTTACTAAGT+GGG | + | chr8.1:6240546-6240565 | MS.gene012242:intron | 40.0% | |
| AGAAGTGAGAAAGCAGACAA+AGG | + | chr8.1:6237803-6237822 | MS.gene012242:intron | 40.0% | |
| AGACCATAGACTTGAAAGCT+TGG | - | chr8.1:6239142-6239161 | None:intergenic | 40.0% | |
| AGTAATACGTATCACCAGAG+TGG | + | chr8.1:6239108-6239127 | MS.gene012242:intron | 40.0% | |
| AGTAGGACAAAAACGTTGAC+CGG | - | chr8.1:6239861-6239880 | None:intergenic | 40.0% | |
| ATGATTTCAAAGGTGACTGG+TGG | - | chr8.1:6240014-6240033 | None:intergenic | 40.0% | |
| CAACCAAATGACACAAGTTG+TGG | + | chr8.1:6236975-6236994 | MS.gene012242:intron | 40.0% | |
| CTTGAATTACTCCGAGCAAA+GGG | - | chr8.1:6239352-6239371 | None:intergenic | 40.0% | |
| GAAATTGATACGTGACCGAT+AGG | + | chr8.1:6240758-6240777 | MS.gene012242:intron | 40.0% | |
| GATTTATTTGCCCTCCTATG+TGG | + | chr8.1:6241865-6241884 | MS.gene012242:CDS | 40.0% | |
| GCAGCAGATAAATACAGGAA+AGG | - | chr8.1:6238421-6238440 | None:intergenic | 40.0% | |
| GCTTATCATAAAGTCCTGAC+TGG | - | chr8.1:6241711-6241730 | None:intergenic | 40.0% | |
| GTCCTCTGGATCTCTAATTA+AGG | - | chr8.1:6241686-6241705 | None:intergenic | 40.0% | |
| TACAAGGATCTGCTATGGTT+TGG | + | chr8.1:6239803-6239822 | MS.gene012242:intron | 40.0% | |
| TCAAGAGTTCACTAAGCATG+TGG | - | chr8.1:6241276-6241295 | None:intergenic | 40.0% | |
| TCCAGTTGTGCTACCATTTA+CGG | + | chr8.1:6240067-6240086 | MS.gene012242:intron | 40.0% | |
| TCTTGAATTACTCCGAGCAA+AGG | - | chr8.1:6239353-6239372 | None:intergenic | 40.0% | |
| TGCCTTAATTAGAGATCCAG+AGG | + | chr8.1:6241681-6241700 | MS.gene012242:CDS | 40.0% | |
| TGGAGGAATAATCATCAGTC+TGG | - | chr8.1:6238935-6238954 | None:intergenic | 40.0% | |
| TGGATGATTTCAAAGGTGAC+TGG | - | chr8.1:6240017-6240036 | None:intergenic | 40.0% | |
| TTAGGATTGATAAGGCGACT+TGG | - | chr8.1:6239547-6239566 | None:intergenic | 40.0% | |
| TTGAGACTTGTACACGATTG+TGG | - | chr8.1:6237001-6237020 | None:intergenic | 40.0% | |
| TTGCATAGAACCACATAGGA+GGG | - | chr8.1:6241878-6241897 | None:intergenic | 40.0% | |
| TTTGCTCGGAGTAATTCAAG+AGG | + | chr8.1:6239352-6239371 | MS.gene012242:CDS | 40.0% | |
| ! | GACTGGTGGTTTTCGAAAAT+GGG | - | chr8.1:6240000-6240019 | None:intergenic | 40.0% |
| ! | GAGAGCTTTTCCTTTGTTCT+TGG | - | chr8.1:6240909-6240928 | None:intergenic | 40.0% |
| ! | TGACTGGTGGTTTTCGAAAA+TGG | - | chr8.1:6240001-6240020 | None:intergenic | 40.0% |
| ! | TTGAAGCATTTAGAGAGGCT+AGG | + | chr8.1:6241132-6241151 | MS.gene012242:intron | 40.0% |
| ! | TTTAAGAAAGGGCGTGGAAT+CGG | + | chr8.1:6239288-6239307 | MS.gene012242:CDS | 40.0% |
| ! | TTTTCGAAAATGGGTCTCAC+TGG | - | chr8.1:6239991-6240010 | None:intergenic | 40.0% |
| !! | AGTCTCTTTTGATTGCTACG+CGG | - | chr8.1:6236834-6236853 | None:intergenic | 40.0% |
| !! | ATAACTTTGGTTCTACTGGC+AGG | - | chr8.1:6240825-6240844 | None:intergenic | 40.0% |
| !! | ATAAGGCGACTTGGTGATTT+GGG | - | chr8.1:6239538-6239557 | None:intergenic | 40.0% |
| !! | CACAACTTGTGTCATTTGGT+TGG | - | chr8.1:6236977-6236996 | None:intergenic | 40.0% |
| !! | CTTTGTTGTTGCAGATGGTA+GGG | + | chr8.1:6239249-6239268 | MS.gene012242:intron | 40.0% |
| !! | TGTTGATTTAAGAAAGGGCG+TGG | + | chr8.1:6239282-6239301 | MS.gene012242:CDS | 40.0% |
| !! | TGTTTTCAAGACGGTCCTAT+CGG | - | chr8.1:6240776-6240795 | None:intergenic | 40.0% |
| !! | TTCCTTGCCTGTTTTCAAGA+CGG | - | chr8.1:6240785-6240804 | None:intergenic | 40.0% |
| !!! | ATCTTTTAAGGCCCTTTGCT+CGG | + | chr8.1:6239338-6239357 | MS.gene012242:CDS | 40.0% |
| !!! | TGTGGGTGTTGCTGTTATTT+TGG | - | chr8.1:6237033-6237052 | None:intergenic | 40.0% |
| AAATCATCCAGTAGCTGCAG+TGG | - | chr8.1:6239747-6239766 | None:intergenic | 45.0% | |
| ACCATAGCAGATCCTTGTAG+AGG | - | chr8.1:6239802-6239821 | None:intergenic | 45.0% | |
| ACTGACGTGAAAGAGAAGCA+AGG | - | chr8.1:6239918-6239937 | None:intergenic | 45.0% | |
| CAACCAAGCCTTACTAAGTG+GGG | + | chr8.1:6240547-6240566 | MS.gene012242:intron | 45.0% | |
| CAATCATAGCAGCGAGCAAA+TGG | - | chr8.1:6241798-6241817 | None:intergenic | 45.0% | |
| CAATTCCGCATCCAAAGCAT+GGG | - | chr8.1:6241738-6241757 | None:intergenic | 45.0% | |
| CACACATGTACTTGTGAGAG+GGG | + | chr8.1:6240432-6240451 | MS.gene012242:intron | 45.0% | |
| CCACACATGTACTTGTGAGA+GGG | + | chr8.1:6240431-6240450 | MS.gene012242:intron | 45.0% | |
| CCTACCATCTGCAACAACAA+AGG | - | chr8.1:6239251-6239270 | None:intergenic | 45.0% | |
| CTACTTGCACTTTATGTGGC+AGG | + | chr8.1:6241619-6241638 | MS.gene012242:intron | 45.0% | |
| GAGGTGAGTGTAGTCTGATT+TGG | + | chr8.1:6240301-6240320 | MS.gene012242:intron | 45.0% | |
| GAGTTCACTAAGCATGTGGA+AGG | - | chr8.1:6241272-6241291 | None:intergenic | 45.0% | |
| GATAGGACCGTCTTGAAAAC+AGG | + | chr8.1:6240775-6240794 | MS.gene012242:intron | 45.0% | |
| GCACAATGAATGTGCACAGT+AGG | - | chr8.1:6239889-6239908 | None:intergenic | 45.0% | |
| GCCTAAGTGGAAGTTATGCT+CGG | - | chr8.1:6239713-6239732 | None:intergenic | 45.0% | |
| GGCTCACTGGATGATTTCAA+AGG | - | chr8.1:6240024-6240043 | None:intergenic | 45.0% | |
| GTAAATGGTAGCACAACTGG+AGG | - | chr8.1:6240068-6240087 | None:intergenic | 45.0% | |
| GTCAAAAGACAAAGGGGGAA+TGG | - | chr8.1:6241381-6241400 | None:intergenic | 45.0% | |
| GTTCTGCACGTCATTTACAG+CGG | + | chr8.1:6241316-6241335 | MS.gene012242:intron | 45.0% | |
| GTTGCATAGAACCACATAGG+AGG | - | chr8.1:6241879-6241898 | None:intergenic | 45.0% | |
| TATGCATCGAAATCACGGCA+AGG | - | chr8.1:6238689-6238708 | None:intergenic | 45.0% | |
| TCCACACATGTACTTGTGAG+AGG | + | chr8.1:6240430-6240449 | MS.gene012242:intron | 45.0% | |
| TCCTCTACAAGGATCTGCTA+TGG | + | chr8.1:6239798-6239817 | MS.gene012242:intron | 45.0% | |
| TGCTTCTCTTTCACGTCAGT+GGG | + | chr8.1:6239918-6239937 | MS.gene012242:intron | 45.0% | |
| TGGTTGACTGAGCAAAAGTG+TGG | + | chr8.1:6239181-6239200 | MS.gene012242:intron | 45.0% | |
| TTGAGCACGTAACACACTCA+AGG | - | chr8.1:6240679-6240698 | None:intergenic | 45.0% | |
| TTGCCGTGATTTCGATGCAT+AGG | + | chr8.1:6238688-6238707 | MS.gene012242:intron | 45.0% | |
| TTGCTTCTCTTTCACGTCAG+TGG | + | chr8.1:6239917-6239936 | MS.gene012242:intron | 45.0% | |
| ! | AGGAGGTGTGTTCATTCATC+AGG | + | chr8.1:6238978-6238997 | MS.gene012242:intron | 45.0% |
| ! | AGTGGGTTTCTCTTTGCATC+CGG | + | chr8.1:6239935-6239954 | MS.gene012242:intron | 45.0% |
| ! | GCTCCAAGCTTTCAAGTCTA+TGG | + | chr8.1:6239136-6239155 | MS.gene012242:intron | 45.0% |
| ! | TGAGTTTGCCATTTGGGCAA+AGG | - | chr8.1:6236664-6236683 | None:intergenic | 45.0% |
| ! | TGCTGCTGAGTTTGCCATTT+GGG | - | chr8.1:6236670-6236689 | None:intergenic | 45.0% |
| ! | TGGCCACAACTTGTGTCATT+TGG | - | chr8.1:6236981-6237000 | None:intergenic | 45.0% |
| !! | CCTTTGTTGTTGCAGATGGT+AGG | + | chr8.1:6239248-6239267 | MS.gene012242:intron | 45.0% |
| !! | GATAAGGCGACTTGGTGATT+TGG | - | chr8.1:6239539-6239558 | None:intergenic | 45.0% |
| !! | TAGCACTGGTGTGATAAGCA+GGG | + | chr8.1:6238727-6238746 | MS.gene012242:intron | 45.0% |
| !! | TCTTTTGATTGCTACGCGGA+TGG | - | chr8.1:6236830-6236849 | None:intergenic | 45.0% |
| !! | TTAGCACTGGTGTGATAAGC+AGG | + | chr8.1:6238726-6238745 | MS.gene012242:intron | 45.0% |
| AAAAGGGGGCCAATTGTTGC+CGG | - | chr8.1:6236706-6236725 | None:intergenic | 50.0% | |
| ACGTATCACCAGAGTGGTCT+TGG | + | chr8.1:6239114-6239133 | MS.gene012242:intron | 50.0% | |
| AGATCCAATGGCTCACGGAA+AGG | + | chr8.1:6241651-6241670 | MS.gene012242:CDS | 50.0% | |
| AGGACAAGCAGGAGATCCAA+TGG | + | chr8.1:6241639-6241658 | MS.gene012242:intron | 50.0% | |
| ATCATTATCGGAAGGACCCC+AGG | + | chr8.1:6241916-6241935 | MS.gene012242:CDS | 50.0% | |
| CAAGCCTTACTAAGTGGGGT+CGG | + | chr8.1:6240551-6240570 | MS.gene012242:intron | 50.0% | |
| CCAATTCCGCATCCAAAGCA+TGG | - | chr8.1:6241739-6241758 | None:intergenic | 50.0% | |
| CCCTCTCACAAGTACATGTG+TGG | - | chr8.1:6240434-6240453 | None:intergenic | 50.0% | |
| CTGCTGCTGAGTTTGCCATT+TGG | - | chr8.1:6236671-6236690 | None:intergenic | 50.0% | |
| CTTTATGTGGCAGGACAAGC+AGG | + | chr8.1:6241628-6241647 | MS.gene012242:intron | 50.0% | |
| GACCGTCTTGAAAACAGGCA+AGG | + | chr8.1:6240780-6240799 | MS.gene012242:intron | 50.0% | |
| GATCCAATGGCTCACGGAAA+GGG | + | chr8.1:6241652-6241671 | MS.gene012242:CDS | 50.0% | |
| GCAAAGACAATTGGGCTCAC+TGG | - | chr8.1:6240037-6240056 | None:intergenic | 50.0% | |
| GCCGAGCATAACTTCCACTT+AGG | + | chr8.1:6239709-6239728 | MS.gene012242:intron | 50.0% | |
| GCCGTAAATGGTAGCACAAC+TGG | - | chr8.1:6240071-6240090 | None:intergenic | 50.0% | |
| GTCGTAGCTTCAGCCGTAAA+TGG | - | chr8.1:6240083-6240102 | None:intergenic | 50.0% | |
| GTGCACAGTAGGACAGAAGT+AGG | - | chr8.1:6239878-6239897 | None:intergenic | 50.0% | |
| GTGGGTTTCTCTTTGCATCC+GGG | + | chr8.1:6239936-6239955 | MS.gene012242:intron | 50.0% | |
| TAGCAGCGAGCAAATGGAGA+AGG | - | chr8.1:6241792-6241811 | None:intergenic | 50.0% | |
| TCATTATCGGAAGGACCCCA+GGG | + | chr8.1:6241917-6241936 | MS.gene012242:CDS | 50.0% | |
| TGTTGTTGCAGATGGTAGGG+TGG | + | chr8.1:6239252-6239271 | MS.gene012242:intron | 50.0% | |
| TTTCCCTTTCCGTGAGCCAT+TGG | - | chr8.1:6241658-6241677 | None:intergenic | 50.0% | |
| ! | CCATGCTTTGGATGCGGAAT+TGG | + | chr8.1:6241736-6241755 | MS.gene012242:CDS | 50.0% |
| ! | GCAAAAGTGTGGAGTTAGCG+AGG | + | chr8.1:6239192-6239211 | MS.gene012242:intron | 50.0% |
| ! | GCTTTGGATGCGGAATTGGA+TGG | + | chr8.1:6241740-6241759 | MS.gene012242:CDS | 50.0% |
| !! | AGCACTGGTGTGATAAGCAG+GGG | + | chr8.1:6238728-6238747 | MS.gene012242:intron | 50.0% |
| !! | ATAGTCTTGGTTCTACCGGC+AGG | - | chr8.1:6240875-6240894 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.1:6240559-6240578 | MS.gene012242:intron | 55.0% | |
| AGTCCTGACTGGAAGTCCTC+TGG | - | chr8.1:6241700-6241719 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTAAGGCT+TGG | - | chr8.1:6240553-6240572 | None:intergenic | 55.0% | |
| CGGTCATTGCCGGCAACAAT+TGG | + | chr8.1:6236694-6236713 | MS.gene012242:CDS | 55.0% | |
| GATAAGCCCCTCCCATGCTT+TGG | + | chr8.1:6241724-6241743 | MS.gene012242:CDS | 55.0% | |
| GATCCAGAGGACTTCCAGTC+AGG | + | chr8.1:6241694-6241713 | MS.gene012242:CDS | 55.0% | |
| GCAGGAGATCCAATGGCTCA+CGG | + | chr8.1:6241646-6241665 | MS.gene012242:CDS | 55.0% | |
| GTAGCCGACCCCACTTAGTA+AGG | - | chr8.1:6240558-6240577 | None:intergenic | 55.0% | |
| GTGGAAGTTATGCTCGGCAG+AGG | - | chr8.1:6239707-6239726 | None:intergenic | 55.0% | |
| TCCGCATCCAAAGCATGGGA+GGG | - | chr8.1:6241734-6241753 | None:intergenic | 55.0% | |
| TTCCGCATCCAAAGCATGGG+AGG | - | chr8.1:6241735-6241754 | None:intergenic | 55.0% | |
| ! | CTCACTGGAGAAAGTGCAGC+TGG | - | chr8.1:6239976-6239995 | None:intergenic | 55.0% |
| !! | GCGACTTGGTGATTTGGGTG+AGG | - | chr8.1:6239533-6239552 | None:intergenic | 55.0% |
| !! | TTGGTTCTACTGGCAGGTCG+CGG | - | chr8.1:6240819-6240838 | None:intergenic | 55.0% |
| ACTGCTGCCACTGCAGCTAC+TGG | + | chr8.1:6239737-6239756 | MS.gene012242:intron | 60.0% | |
| ATCGGAAGGACCCCAGGGAA+CGG | + | chr8.1:6241922-6241941 | MS.gene012242:CDS | 60.0% | |
| CCGCATCCAAAGCATGGGAG+GGG | - | chr8.1:6241733-6241752 | None:intergenic | 60.0% | |
| CTACTGGCAGGTCGCGGTTA+GGG | - | chr8.1:6240813-6240832 | None:intergenic | 60.0% | |
| GCTTGGAGCCAAGACCACTC+TGG | - | chr8.1:6239125-6239144 | None:intergenic | 60.0% | |
| GGCAAACTCAGCAGCAGCAG+CGG | + | chr8.1:6236674-6236693 | MS.gene012242:CDS | 60.0% | |
| GGCAGCAGTAGGTGCCTAAG+TGG | - | chr8.1:6239726-6239745 | None:intergenic | 60.0% | |
| GTAGCTGCAGTGGCAGCAGT+AGG | - | chr8.1:6239737-6239756 | None:intergenic | 60.0% | |
| TCTACTGGCAGGTCGCGGTT+AGG | - | chr8.1:6240814-6240833 | None:intergenic | 60.0% | |
| ! | CCCCTCCCATGCTTTGGATG+CGG | + | chr8.1:6241730-6241749 | MS.gene012242:CDS | 60.0% |
| !! | TTGGTTCTACCGGCAGGTCG+CGG | - | chr8.1:6240869-6240888 | None:intergenic | 60.0% |
| AGACCCTAACCGCGACCTGC+CGG | + | chr8.1:6240857-6240876 | MS.gene012242:intron | 65.0% | |
| CTACCGGCAGGTCGCGGTTA+GGG | - | chr8.1:6240863-6240882 | None:intergenic | 65.0% | |
| GCAGCAGCAGCGGTCATTGC+CGG | + | chr8.1:6236684-6236703 | MS.gene012242:CDS | 65.0% | |
| TCGGAAGGACCCCAGGGAAC+GGG | + | chr8.1:6241923-6241942 | MS.gene012242:CDS | 65.0% | |
| TCTACCGGCAGGTCGCGGTT+AGG | - | chr8.1:6240864-6240883 | None:intergenic | 65.0% | |
| AAGGACCCCAGGGAACGGGC+GGG | + | chr8.1:6241927-6241946 | MS.gene012242:CDS | 70.0% | |
| GAAGGACCCCAGGGAACGGG+CGG | + | chr8.1:6241926-6241945 | MS.gene012242:CDS | 70.0% | |
| AGGACCCCAGGGAACGGGCG+GGG | + | chr8.1:6241928-6241947 | MS.gene012242:CDS | 75.0% | |
| ! | CCAGCCCCGCCCGTTCCCTG+GGG | - | chr8.1:6241935-6241954 | None:intergenic | 80.0% |
| ! | CCCAGCCCCGCCCGTTCCCT+GGG | - | chr8.1:6241936-6241955 | None:intergenic | 80.0% |
| ! | CCCAGGGAACGGGCGGGGCT+GGG | + | chr8.1:6241933-6241952 | MS.gene012242:CDS | 80.0% |
| ! | TCCCAGCCCCGCCCGTTCCC+TGG | - | chr8.1:6241937-6241956 | None:intergenic | 80.0% |
| ! | CCCCAGGGAACGGGCGGGGC+TGG | + | chr8.1:6241932-6241951 | MS.gene012242:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 6236649 | 6241971 | 6236649 | ID=MS.gene012242 |
| chr8.1 | mRNA | 6236649 | 6241971 | 6236649 | ID=MS.gene012242.t1;Parent=MS.gene012242 |
| chr8.1 | exon | 6236649 | 6236895 | 6236649 | ID=MS.gene012242.t1.exon1;Parent=MS.gene012242.t1 |
| chr8.1 | CDS | 6236649 | 6236895 | 6236649 | ID=cds.MS.gene012242.t1;Parent=MS.gene012242.t1 |
| chr8.1 | exon | 6239263 | 6239373 | 6239263 | ID=MS.gene012242.t1.exon2;Parent=MS.gene012242.t1 |
| chr8.1 | CDS | 6239263 | 6239373 | 6239263 | ID=cds.MS.gene012242.t1;Parent=MS.gene012242.t1 |
| chr8.1 | exon | 6241641 | 6241767 | 6241641 | ID=MS.gene012242.t1.exon3;Parent=MS.gene012242.t1 |
| chr8.1 | CDS | 6241641 | 6241767 | 6241641 | ID=cds.MS.gene012242.t1;Parent=MS.gene012242.t1 |
| chr8.1 | exon | 6241854 | 6241971 | 6241854 | ID=MS.gene012242.t1.exon4;Parent=MS.gene012242.t1 |
| chr8.1 | CDS | 6241854 | 6241971 | 6241854 | ID=cds.MS.gene012242.t1;Parent=MS.gene012242.t1 |
| Gene Sequence |
| Protein sequence |
