Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012317.t1 | XP_003610026.1 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 5.70E-281 | 976.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012317.t1 | Q9LU77 | 68.7 | 627 | 170 | 11 | 1 | 603 | 1 | 625 | 3.6e-207 | 722.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012317.t1 | Q84YG8 | 97.7 | 603 | 14 | 0 | 1 | 603 | 1 | 603 | 4.1e-281 | 976.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012317 | MS.gene31845 | PPI |
| MS.gene012317 | MS.gene32322 | PPI |
| MS.gene012317 | MS.gene026690 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012317.t1 | MTR_4g127100 | 98.507 | 603 | 9 | 0 | 1 | 603 | 1 | 603 | 0.0 | 1229 |
| MS.gene012317.t1 | MTR_4g127100 | 98.295 | 528 | 9 | 0 | 1 | 528 | 1 | 528 | 0.0 | 1077 |
| MS.gene012317.t1 | MTR_4g127090 | 73.727 | 609 | 90 | 7 | 1 | 603 | 1 | 545 | 0.0 | 872 |
| MS.gene012317.t1 | MTR_4g084870 | 56.561 | 663 | 202 | 15 | 1 | 603 | 1 | 637 | 0.0 | 686 |
| MS.gene012317.t1 | MTR_6g069510 | 58.626 | 626 | 192 | 12 | 1 | 603 | 1 | 582 | 0.0 | 682 |
| MS.gene012317.t1 | MTR_7g089360 | 60.065 | 611 | 194 | 12 | 1 | 603 | 1 | 569 | 0.0 | 661 |
| MS.gene012317.t1 | MTR_7g089360 | 59.902 | 611 | 195 | 12 | 1 | 603 | 1 | 569 | 0.0 | 658 |
| MS.gene012317.t1 | MTR_1g030890 | 57.346 | 633 | 206 | 12 | 1 | 603 | 1 | 599 | 0.0 | 654 |
| MS.gene012317.t1 | MTR_8g107360 | 56.271 | 606 | 158 | 14 | 1 | 603 | 1 | 502 | 0.0 | 613 |
| MS.gene012317.t1 | MTR_1g030890 | 53.777 | 556 | 193 | 12 | 1 | 526 | 1 | 522 | 1.47e-179 | 518 |
| MS.gene012317.t1 | MTR_1g029190 | 47.455 | 609 | 210 | 20 | 1 | 603 | 1 | 505 | 6.91e-154 | 453 |
| MS.gene012317.t1 | MTR_2g038470 | 42.693 | 609 | 221 | 13 | 1 | 603 | 1 | 487 | 5.40e-143 | 424 |
| MS.gene012317.t1 | MTR_7g009370 | 53.591 | 181 | 74 | 2 | 423 | 603 | 165 | 335 | 9.61e-51 | 179 |
| MS.gene012317.t1 | MTR_7g009370 | 54.658 | 161 | 68 | 2 | 1 | 159 | 1 | 158 | 3.63e-48 | 172 |
| MS.gene012317.t1 | MTR_6g011400 | 55.696 | 158 | 70 | 0 | 1 | 158 | 1 | 158 | 3.60e-50 | 177 |
| MS.gene012317.t1 | MTR_6g011400 | 58.865 | 141 | 56 | 1 | 465 | 603 | 199 | 339 | 3.69e-48 | 172 |
| MS.gene012317.t1 | MTR_7g079720 | 49.359 | 156 | 78 | 1 | 1 | 156 | 1 | 155 | 1.20e-47 | 171 |
| MS.gene012317.t1 | MTR_7g079720 | 44.886 | 176 | 85 | 2 | 435 | 603 | 169 | 339 | 1.05e-43 | 160 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012317.t1 | AT5G57090 | 74.641 | 627 | 133 | 11 | 1 | 603 | 1 | 625 | 0.0 | 899 |
| MS.gene012317.t1 | AT5G57090 | 72.381 | 525 | 120 | 10 | 103 | 603 | 2 | 525 | 0.0 | 714 |
| MS.gene012317.t1 | AT1G70940 | 57.430 | 646 | 204 | 14 | 1 | 603 | 1 | 618 | 0.0 | 668 |
| MS.gene012317.t1 | AT1G23080 | 58.494 | 624 | 207 | 12 | 1 | 603 | 1 | 593 | 0.0 | 666 |
| MS.gene012317.t1 | AT1G23080 | 58.494 | 624 | 207 | 12 | 1 | 603 | 1 | 593 | 0.0 | 666 |
| MS.gene012317.t1 | AT2G01420 | 57.097 | 627 | 212 | 12 | 1 | 603 | 1 | 594 | 0.0 | 664 |
| MS.gene012317.t1 | AT2G01420 | 57.827 | 626 | 205 | 13 | 1 | 603 | 1 | 590 | 0.0 | 663 |
| MS.gene012317.t1 | AT1G23080 | 57.962 | 628 | 208 | 12 | 1 | 603 | 1 | 597 | 0.0 | 662 |
| MS.gene012317.t1 | AT1G73590 | 58.466 | 626 | 211 | 14 | 1 | 603 | 1 | 600 | 0.0 | 651 |
| MS.gene012317.t1 | AT1G23080 | 55.393 | 547 | 192 | 12 | 1 | 526 | 1 | 516 | 0.0 | 549 |
| MS.gene012317.t1 | AT2G01420 | 54.364 | 550 | 194 | 12 | 1 | 526 | 1 | 517 | 0.0 | 539 |
| MS.gene012317.t1 | AT1G77110 | 49.235 | 327 | 130 | 9 | 1 | 306 | 1 | 312 | 1.57e-90 | 290 |
| MS.gene012317.t1 | AT1G77110 | 69.388 | 147 | 45 | 0 | 457 | 603 | 402 | 548 | 3.06e-61 | 213 |
| MS.gene012317.t1 | AT1G77110 | 49.235 | 327 | 130 | 9 | 1 | 306 | 1 | 312 | 3.40e-90 | 290 |
| MS.gene012317.t1 | AT1G77110 | 69.388 | 147 | 45 | 0 | 457 | 603 | 402 | 548 | 7.33e-61 | 212 |
| MS.gene012317.t1 | AT5G16530 | 52.532 | 158 | 74 | 1 | 1 | 158 | 1 | 157 | 1.13e-50 | 178 |
| MS.gene012317.t1 | AT5G16530 | 53.383 | 133 | 62 | 0 | 471 | 603 | 195 | 327 | 5.41e-44 | 160 |
| MS.gene012317.t1 | AT5G16530 | 52.532 | 158 | 74 | 1 | 1 | 158 | 1 | 157 | 4.20e-50 | 177 |
| MS.gene012317.t1 | AT5G16530 | 53.383 | 133 | 62 | 0 | 471 | 603 | 195 | 327 | 1.59e-43 | 159 |
| MS.gene012317.t1 | AT5G15100 | 57.042 | 142 | 61 | 0 | 462 | 603 | 204 | 345 | 8.83e-48 | 171 |
| MS.gene012317.t1 | AT5G15100 | 47.458 | 177 | 84 | 2 | 1 | 173 | 1 | 172 | 3.51e-43 | 159 |
Find 136 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCAAATCCTATGCTTTC+TGG | 0.083914 | 8.4:-7679651 | MS.gene012317:CDS |
| AAAGCTGCTTCTACTGATTT+TGG | 0.151528 | 8.4:-7679486 | MS.gene012317:CDS |
| GTGGCGTCATATTATTTAAA+TGG | 0.167054 | 8.4:+7679979 | None:intergenic |
| TCTGACGTTGTTTCGCTTAA+TGG | 0.202697 | 8.4:-7680110 | MS.gene012317:CDS |
| GTTATAGAAGCTGCAGTTTC+AGG | 0.222137 | 8.4:+7680149 | None:intergenic |
| GAAATGCCATCTATTGTAAA+AGG | 0.235112 | 8.4:-7678687 | MS.gene012317:CDS |
| TTTGGTCTCTTGTATCATTT+AGG | 0.244094 | 8.4:-7678969 | MS.gene012317:intron |
| ATAAGACTTGAGTAGGTATT+AGG | 0.244249 | 8.4:+7679000 | None:intergenic |
| CACCCAGTACTGAGTATATT+TGG | 0.250618 | 8.4:+7678211 | None:intergenic |
| AATACCTACTCAAGTCTTAT+AGG | 0.254018 | 8.4:-7678997 | MS.gene012317:CDS |
| TTAAGATTCCCTTCGGAAAT+AGG | 0.258413 | 8.4:+7679522 | None:intergenic |
| CTTCCAAGTCCATCTTCTTC+TGG | 0.279820 | 8.4:+7679118 | None:intergenic |
| ATGTGCAACTCCTTGTTATT+AGG | 0.280094 | 8.4:+7679570 | None:intergenic |
| CTATTTGTGTATCCGTGTTT+TGG | 0.282706 | 8.4:+7679834 | None:intergenic |
| TTGTTCTGCAAAGTGTTATT+TGG | 0.283570 | 8.4:-7680235 | MS.gene012317:CDS |
| CTTCAAACTGATGCTGAAAT+AGG | 0.286348 | 8.4:-7680077 | MS.gene012317:CDS |
| TCTTCCTAACACACTTGTTA+TGG | 0.291487 | 8.4:-7680318 | MS.gene012317:CDS |
| GATCATTGGAAGATATAAAA+TGG | 0.291739 | 8.4:+7680480 | None:intergenic |
| ATCTTCTTCTGGCTAATATA+TGG | 0.325305 | 8.4:+7679129 | None:intergenic |
| CTTACATGTTGCAATTGTTC+AGG | 0.334263 | 8.4:-7678395 | MS.gene012317:intron |
| TGGATGGAGATTGTATTCTT+TGG | 0.334269 | 8.4:+7678231 | None:intergenic |
| CTTCCTAACACACTTGTTAT+GGG | 0.344721 | 8.4:-7680317 | MS.gene012317:CDS |
| TGAATATGCAGGTCTGTTCA+TGG | 0.369728 | 8.4:-7678542 | MS.gene012317:intron |
| GAACCAGAAAGCATAGGATT+TGG | 0.370922 | 8.4:+7679648 | None:intergenic |
| AAGATCAACTACTAACTCTA+TGG | 0.372841 | 8.4:-7680024 | MS.gene012317:CDS |
| GACTCATCCTTATCATGGTT+TGG | 0.377147 | 8.4:-7679041 | MS.gene012317:CDS |
| GATAGCATGGGTGGTGGAAA+TGG | 0.382932 | 8.4:-7679600 | MS.gene012317:CDS |
| CAAGTCTTATAGGACTTGTT+TGG | 0.388260 | 8.4:-7678987 | MS.gene012317:CDS |
| AGGAGTTGCACATGTTTGTT+TGG | 0.388483 | 8.4:-7679560 | MS.gene012317:CDS |
| ACTACTAACTCTATGGTATC+TGG | 0.400134 | 8.4:-7680017 | MS.gene012317:CDS |
| TGGCGTCATATTATTTAAAT+GGG | 0.400508 | 8.4:+7679980 | None:intergenic |
| AGATGGACTTGGAAGGAGGA+GGG | 0.406669 | 8.4:-7679110 | MS.gene012317:CDS |
| TTCACACCAGATCAATGTTC+TGG | 0.419637 | 8.4:-7680548 | MS.gene012317:CDS |
| ATTCCCATAACAAGTGTGTT+AGG | 0.421389 | 8.4:+7680314 | None:intergenic |
| ATTCATAGCATAAGGATCAT+TGG | 0.433457 | 8.4:+7680466 | None:intergenic |
| TGCATAAGAAGAGGGGAGGG+AGG | 0.434830 | 8.4:-7679716 | MS.gene012317:CDS |
| CATCCAAATATACTCAGTAC+TGG | 0.436602 | 8.4:-7678214 | MS.gene012317:CDS |
| ATACTGTCTGATGCTGGTCT+TGG | 0.436774 | 8.4:-7678654 | MS.gene012317:CDS |
| AGACCTCGGAGTAGCCCCTT+TGG | 0.441905 | 8.4:+7679767 | None:intergenic |
| AGTCTTGTCATAACACTTGC+TGG | 0.442208 | 8.4:+7679060 | None:intergenic |
| CACAAAGGGAACAATACCTT+GGG | 0.446341 | 8.4:+7678258 | None:intergenic |
| GACAAGACTCATCCTTATCA+TGG | 0.446845 | 8.4:-7679046 | MS.gene012317:CDS |
| TGTGTTAGGAAGAGTTGAAA+GGG | 0.446908 | 8.4:+7680328 | None:intergenic |
| AAAACCAAGATAGTCTTGAT+TGG | 0.448110 | 8.4:-7680367 | MS.gene012317:CDS |
| AAACTAGATCCTCTTGGAGT+TGG | 0.454124 | 8.4:+7679903 | None:intergenic |
| CTATCTATAACCATGATTAC+CGG | 0.459673 | 8.4:-7680659 | None:intergenic |
| AAGATGGACTTGGAAGGAGG+AGG | 0.460717 | 8.4:-7679111 | MS.gene012317:CDS |
| ACGCATACCAATTGCTATTG+AGG | 0.461284 | 8.4:+7678426 | None:intergenic |
| GTGAATCAGCTGCTAAGAAA+TGG | 0.462800 | 8.4:+7680441 | None:intergenic |
| CTTTCTGGTTCTACAAGTGC+TGG | 0.462832 | 8.4:-7679636 | MS.gene012317:CDS |
| AAATGGTAATTCATAGCATA+AGG | 0.463466 | 8.4:+7680458 | None:intergenic |
| TTTCCACATGCAATCAGCTT+AGG | 0.466851 | 8.4:+7678511 | None:intergenic |
| AGTGGTGAGTTGTTCAATAA+TGG | 0.467127 | 8.4:-7679687 | MS.gene012317:CDS |
| CGGCGCTTTACTTTGAAACA+TGG | 0.467403 | 8.4:+7679860 | None:intergenic |
| TGCATGTTTAAGATTCCCTT+CGG | 0.467611 | 8.4:+7679515 | None:intergenic |
| ATTCTATGCAATCTTCCAAA+GGG | 0.470349 | 8.4:-7679782 | MS.gene012317:CDS |
| TAGTCCAATCAAGACTATCT+TGG | 0.470572 | 8.4:+7680363 | None:intergenic |
| ATCTCAATACTGTCTGATGC+TGG | 0.484824 | 8.4:-7678660 | MS.gene012317:CDS |
| GATGGACTTGGAAGGAGGAG+GGG | 0.487071 | 8.4:-7679109 | MS.gene012317:CDS |
| GCGGCAACCTCAATAGCAAT+TGG | 0.493077 | 8.4:-7678433 | MS.gene012317:CDS |
| ATTTCAACATCCCTTTGTCT+AGG | 0.495176 | 8.4:+7679171 | None:intergenic |
| AATATCATAGCAACATATAG+TGG | 0.496035 | 8.4:+7680602 | None:intergenic |
| GAGGTTGCCGCAATCACAGC+TGG | 0.497964 | 8.4:+7678445 | None:intergenic |
| ACAAAGGGATGTTGAAATTG+AGG | 0.498259 | 8.4:-7679166 | MS.gene012317:CDS |
| TTTATACCAGAACATTGATC+TGG | 0.498746 | 8.4:+7680542 | None:intergenic |
| GTGTGTTAGGAAGAGTTGAA+AGG | 0.500046 | 8.4:+7680327 | None:intergenic |
| TGCCGCAATCACAGCTGGAC+CGG | 0.500587 | 8.4:+7678450 | None:intergenic |
| TATTCTTTGGCAAACACAAA+GGG | 0.501329 | 8.4:+7678244 | None:intergenic |
| CCAGAAAGCATAGGATTTGG+AGG | 0.501646 | 8.4:+7679651 | None:intergenic |
| TGGTTAAAACTAGATCCTCT+TGG | 0.501747 | 8.4:+7679897 | None:intergenic |
| CATACGGTTCAGTTCGTTGG+TGG | 0.502544 | 8.4:-7680577 | MS.gene012317:CDS |
| GAAAATACCGTTGCATCAAA+AGG | 0.506036 | 8.4:-7679432 | MS.gene012317:intron |
| ATATATTAGCCAGAAGAAGA+TGG | 0.507802 | 8.4:-7679127 | MS.gene012317:CDS |
| TATATCCTTACCGGTAATCA+TGG | 0.512246 | 8.4:+7680649 | None:intergenic |
| CCACGAGCTTCAAATCTAAC+CGG | 0.512403 | 8.4:-7679960 | MS.gene012317:CDS |
| TAGCATACGGTTCAGTTCGT+TGG | 0.514377 | 8.4:-7680580 | MS.gene012317:CDS |
| GGATGCATAAGAAGAGGGGA+GGG | 0.515503 | 8.4:-7679719 | MS.gene012317:CDS |
| CACAAAGAAGAAAGATAGCA+TGG | 0.528645 | 8.4:-7679613 | MS.gene012317:CDS |
| GTCTGATGCTGGTCTTGGAA+TGG | 0.532632 | 8.4:-7678649 | MS.gene012317:CDS |
| TATTCTATGCAATCTTCCAA+AGG | 0.533077 | 8.4:-7679783 | MS.gene012317:CDS |
| TAGCCAGAAGAAGATGGACT+TGG | 0.535792 | 8.4:-7679121 | MS.gene012317:CDS |
| ATGGGTGGTGGAAATGGTAA+TGG | 0.538764 | 8.4:-7679594 | MS.gene012317:CDS |
| AGGATGCATAAGAAGAGGGG+AGG | 0.538999 | 8.4:-7679720 | MS.gene012317:CDS |
| AACATCGTATATATCCTTAC+CGG | 0.540847 | 8.4:+7680640 | None:intergenic |
| GCTATGTATGGTGATTTCTC+AGG | 0.545619 | 8.4:-7680278 | MS.gene012317:CDS |
| AGGGGAGGGAGGAGTATGAG+TGG | 0.545646 | 8.4:-7679705 | MS.gene012317:CDS |
| TCATGTGGAACATATTTGGA+AGG | 0.549434 | 8.4:+7679453 | None:intergenic |
| TATAACCATGATTACCGGTA+AGG | 0.552385 | 8.4:-7680654 | None:intergenic |
| AAGAAAGATAGCATGGGTGG+TGG | 0.552901 | 8.4:-7679606 | MS.gene012317:CDS |
| GAACATGAGTCCTAGACAAA+GGG | 0.557185 | 8.4:-7679181 | MS.gene012317:CDS |
| TCTTCGAAATTTGAAGACCT+CGG | 0.557299 | 8.4:+7679753 | None:intergenic |
| ACACAAAGGGAACAATACCT+TGG | 0.558237 | 8.4:+7678257 | None:intergenic |
| ATTTCAGCATCAGTTTGAAG+TGG | 0.563565 | 8.4:+7680080 | None:intergenic |
| ATTGAGGATGCATAAGAAGA+GGG | 0.564904 | 8.4:-7679724 | MS.gene012317:CDS |
| AGTGCTTCACCTATTTCCGA+AGG | 0.569824 | 8.4:-7679531 | MS.gene012317:CDS |
| GACCGGTCCAGCTGTGATTG+CGG | 0.570068 | 8.4:-7678452 | MS.gene012317:CDS |
| ATAAAATGGAAAGATAGTAA+TGG | 0.571283 | 8.4:+7680494 | None:intergenic |
| GGAATGGCCATGTTCAGTCT+AGG | 0.576547 | 8.4:-7678633 | MS.gene012317:intron |
| GATGCTGAAATAGGTGAAGA+TGG | 0.576751 | 8.4:-7680068 | MS.gene012317:CDS |
| AAGTCCTATAAGACTTGAGT+AGG | 0.579378 | 8.4:+7678993 | None:intergenic |
| ATGGCTGTAAGGTTCTTGAC+CGG | 0.579568 | 8.4:-7678469 | MS.gene012317:CDS |
| GAAAGCATAGGATTTGGAGG+AGG | 0.582023 | 8.4:+7679654 | None:intergenic |
| ATTTCGAAGATGAGACATTG+AGG | 0.583231 | 8.4:-7679740 | MS.gene012317:CDS |
| AGCATCAGACAGTATTGAGA+TGG | 0.585685 | 8.4:+7678662 | None:intergenic |
| CATACATAGCTCTTAAAAGA+GGG | 0.587601 | 8.4:+7680291 | None:intergenic |
| GTATTCTTTGGCAAACACAA+AGG | 0.589188 | 8.4:+7678243 | None:intergenic |
| CCATACATAGCTCTTAAAAG+AGG | 0.589751 | 8.4:+7680290 | None:intergenic |
| GTTGCTATGATATTAGCATA+CGG | 0.591499 | 8.4:-7680593 | MS.gene012317:CDS |
| TCAATAGCAATTGGTATGCG+TGG | 0.591915 | 8.4:-7678424 | MS.gene012317:CDS |
| CATTGAGGATGCATAAGAAG+AGG | 0.595513 | 8.4:-7679725 | MS.gene012317:CDS |
| ATCCAAATATACTCAGTACT+GGG | 0.597499 | 8.4:-7678213 | None:intergenic |
| CAGTACTGAGTATATTTGGA+TGG | 0.598102 | 8.4:+7678215 | None:intergenic |
| CAGCCTAAGCTGATTGCATG+TGG | 0.600231 | 8.4:-7678514 | MS.gene012317:CDS |
| CCGGTTAGATTTGAAGCTCG+TGG | 0.602636 | 8.4:+7679960 | None:intergenic |
| AAAGCATAGGATTTGGAGGA+GGG | 0.604256 | 8.4:+7679655 | None:intergenic |
| AGAACATGAGTCCTAGACAA+AGG | 0.609263 | 8.4:-7679182 | MS.gene012317:CDS |
| CAGAAGAAGATGGACTTGGA+AGG | 0.618184 | 8.4:-7679117 | MS.gene012317:CDS |
| AAGAAGATGGACTTGGAAGG+AGG | 0.619267 | 8.4:-7679114 | MS.gene012317:CDS |
| TTGCAGGCTGCACTTCCCCA+AGG | 0.623512 | 8.4:-7678274 | MS.gene012317:intron |
| TGATTTCTCAGGAAATCTCA+TGG | 0.626161 | 8.4:-7680267 | MS.gene012317:CDS |
| CTTGTAGAACCAGAAAGCAT+AGG | 0.628500 | 8.4:+7679642 | None:intergenic |
| ACAAGTACCTAGACTGAACA+TGG | 0.632685 | 8.4:+7678626 | None:intergenic |
| GGTGAGTTGTTCAATAATGG+TGG | 0.635458 | 8.4:-7679684 | MS.gene012317:CDS |
| TCAAGAGAACCAACTCCAAG+AGG | 0.636626 | 8.4:-7679912 | MS.gene012317:CDS |
| TTCTATGCAATCTTCCAAAG+GGG | 0.639413 | 8.4:-7679781 | MS.gene012317:CDS |
| AGATGGTAAACTTCATGTTG+TGG | 0.647519 | 8.4:-7680051 | MS.gene012317:CDS |
| GTGCTTCACCTATTTCCGAA+GGG | 0.647728 | 8.4:-7679530 | MS.gene012317:CDS |
| AAGAAGAAAGATAGCATGGG+TGG | 0.662615 | 8.4:-7679609 | MS.gene012317:CDS |
| TGGTAATGGACCTAATAACA+AGG | 0.666402 | 8.4:-7679580 | MS.gene012317:CDS |
| ACAAAGAAGAAAGATAGCAT+GGG | 0.672441 | 8.4:-7679612 | MS.gene012317:CDS |
| TTGAGGATGCATAAGAAGAG+GGG | 0.674550 | 8.4:-7679723 | MS.gene012317:CDS |
| CTTCCAAAGGGGCTACTCCG+AGG | 0.679359 | 8.4:-7679770 | MS.gene012317:CDS |
| AACAGAATATATCTCAACAC+CGG | 0.682527 | 8.4:+7679941 | None:intergenic |
| CTTGTCATAACACTTGCTGG+AGG | 0.701230 | 8.4:+7679063 | None:intergenic |
| AAAGCGCCGAGTCCAAAACA+CGG | 0.735141 | 8.4:-7679846 | MS.gene012317:CDS |
| ACAAAGGGAACAATACCTTG+GGG | 0.771870 | 8.4:+7678259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGCTTATATTTAAAAAA+CGG | + | chr8.4:7679979-7679998 | None:intergenic | 10.0% |
| !!! | AATGTTTAATTTTAATTTGC+AGG | - | chr8.4:7680571-7680590 | MS.gene012317:CDS | 15.0% |
| !!! | ATTTTGCTTATATTTAGAAA+CGG | - | chr8.4:7680087-7680106 | MS.gene012317:CDS | 15.0% |
| !!! | TAATAGATTGAAGATTTTTT+TGG | + | chr8.4:7679942-7679961 | None:intergenic | 15.0% |
| !!! | TGAAAGTTGATATATTTATA+GGG | + | chr8.4:7679547-7679566 | None:intergenic | 15.0% |
| !!! | TTGAAAGTTGATATATTTAT+AGG | + | chr8.4:7679548-7679567 | None:intergenic | 15.0% |
| !! | AATAAGCAACTAATTAGAAT+AGG | + | chr8.4:7680543-7680562 | None:intergenic | 20.0% |
| !! | AATTAAGCCAAAAATTTCTT+AGG | + | chr8.4:7680281-7680300 | None:intergenic | 20.0% |
| !! | ATAAAATGGAAAGATAGTAA+TGG | + | chr8.4:7678370-7678389 | None:intergenic | 20.0% |
| !! | ATAAGCAACTAATTAGAATA+GGG | + | chr8.4:7680542-7680561 | None:intergenic | 20.0% |
| !! | CATTCATTTAATGATGTATT+TGG | - | chr8.4:7680014-7680033 | MS.gene012317:CDS | 20.0% |
| !!! | ACAAATAGTTTTCAAAGTAA+TGG | - | chr8.4:7679042-7679061 | MS.gene012317:CDS | 20.0% |
| !!! | ATAAGCAAAATTGACTTTTT+AGG | - | chr8.4:7679989-7680008 | MS.gene012317:CDS | 20.0% |
| !!! | ATAATCATTTTTGAATATGC+AGG | - | chr8.4:7680308-7680327 | MS.gene012317:CDS | 20.0% |
| !!! | ATATTCTCCTAAGAAATTTT+TGG | - | chr8.4:7680271-7680290 | MS.gene012317:CDS | 20.0% |
| ! | AAATGGTAATTCATAGCATA+AGG | + | chr8.4:7678406-7678425 | None:intergenic | 25.0% |
| ! | AATATCATAGCAACATATAG+TGG | + | chr8.4:7678262-7678281 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr8.4:7680053-7680072 | None:intergenic | 25.0% |
| ! | GATCATTGGAAGATATAAAA+TGG | + | chr8.4:7678384-7678403 | None:intergenic | 25.0% |
| ! | TAAGCAACTAATTAGAATAG+GGG | + | chr8.4:7680541-7680560 | None:intergenic | 25.0% |
| ! | TGCTTATATTTAAAAAACGG+AGG | + | chr8.4:7679976-7679995 | None:intergenic | 25.0% |
| ! | TGGCGTCATATTATTTAAAT+GGG | + | chr8.4:7678884-7678903 | None:intergenic | 25.0% |
| ! | TTCTTAGGAGAATATAATGT+TGG | + | chr8.4:7680266-7680285 | None:intergenic | 25.0% |
| !! | AGTTTTCAAAGTAATGGTAA+TGG | - | chr8.4:7679048-7679067 | MS.gene012317:CDS | 25.0% |
| !! | ATTTTCATGTGGAACATATT+TGG | + | chr8.4:7679415-7679434 | None:intergenic | 25.0% |
| !! | TTTAATACCTTTTGATGCAA+CGG | + | chr8.4:7679439-7679458 | None:intergenic | 25.0% |
| !!! | TTGAAGATTTTTTTGGAGAT+TGG | + | chr8.4:7679935-7679954 | None:intergenic | 25.0% |
| AACAGAATATATCTCAACAC+CGG | + | chr8.4:7678923-7678942 | None:intergenic | 30.0% | |
| AACATCGTATATATCCTTAC+CGG | + | chr8.4:7678224-7678243 | None:intergenic | 30.0% | |
| AAGATCAACTACTAACTCTA+TGG | - | chr8.4:7678837-7678856 | MS.gene012317:intron | 30.0% | |
| ACAAAGAAGAAAGATAGCAT+GGG | - | chr8.4:7679249-7679268 | MS.gene012317:intron | 30.0% | |
| ACATGGCATAAAAATCAGTT+TGG | + | chr8.4:7678987-7679006 | None:intergenic | 30.0% | |
| ATAAGACTTGAGTAGGTATT+AGG | + | chr8.4:7679864-7679883 | None:intergenic | 30.0% | |
| ATATATTAGCCAGAAGAAGA+TGG | - | chr8.4:7679734-7679753 | MS.gene012317:CDS | 30.0% | |
| ATTCATAGCATAAGGATCAT+TGG | + | chr8.4:7678398-7678417 | None:intergenic | 30.0% | |
| ATTCTATGCAATCTTCCAAA+GGG | - | chr8.4:7679079-7679098 | MS.gene012317:CDS | 30.0% | |
| CATACATAGCTCTTAAAAGA+GGG | + | chr8.4:7678573-7678592 | None:intergenic | 30.0% | |
| CTTCAAAAAGTAGTTATCCT+TGG | - | chr8.4:7678442-7678461 | MS.gene012317:CDS | 30.0% | |
| GAAATGCCATCTATTGTAAA+AGG | - | chr8.4:7680174-7680193 | MS.gene012317:CDS | 30.0% | |
| GTGGCGTCATATTATTTAAA+TGG | + | chr8.4:7678885-7678904 | None:intergenic | 30.0% | |
| GTTGCTATGATATTAGCATA+CGG | - | chr8.4:7678268-7678287 | MS.gene012317:CDS | 30.0% | |
| TATTCTATGCAATCTTCCAA+AGG | - | chr8.4:7679078-7679097 | MS.gene012317:CDS | 30.0% | |
| TATTCTTTGGCAAACACAAA+GGG | + | chr8.4:7680620-7680639 | None:intergenic | 30.0% | |
| TGCTTATATTTAGAAACGGA+GGG | - | chr8.4:7680091-7680110 | MS.gene012317:CDS | 30.0% | |
| TTGCTTATATTTAGAAACGG+AGG | - | chr8.4:7680090-7680109 | MS.gene012317:CDS | 30.0% | |
| TTTATACCAGAACATTGATC+TGG | + | chr8.4:7678322-7678341 | None:intergenic | 30.0% | |
| TTTGGTCTCTTGTATCATTT+AGG | - | chr8.4:7679892-7679911 | MS.gene012317:CDS | 30.0% | |
| ! | AAAACCAAGATAGTCTTGAT+TGG | - | chr8.4:7678494-7678513 | MS.gene012317:CDS | 30.0% |
| ! | AATACCTACTCAAGTCTTAT+AGG | - | chr8.4:7679864-7679883 | MS.gene012317:CDS | 30.0% |
| ! | ATCTTCTTCTGGCTAATATA+TGG | + | chr8.4:7679735-7679754 | None:intergenic | 30.0% |
| ! | ATGGAACCTTTTACAATAGA+TGG | + | chr8.4:7680183-7680202 | None:intergenic | 30.0% |
| ! | TTGTTCTGCAAAGTGTTATT+TGG | - | chr8.4:7678626-7678645 | MS.gene012317:intron | 30.0% |
| AAGTCCTATAAGACTTGAGT+AGG | + | chr8.4:7679871-7679890 | None:intergenic | 35.0% | |
| ACAAAGGGATGTTGAAATTG+AGG | - | chr8.4:7679695-7679714 | MS.gene012317:CDS | 35.0% | |
| ACGCTAGATTATATAGAACG+AGG | + | chr8.4:7679508-7679527 | None:intergenic | 35.0% | |
| ACTACTAACTCTATGGTATC+TGG | - | chr8.4:7678844-7678863 | MS.gene012317:intron | 35.0% | |
| AGATCATGTACAAGATTGCA+CGG | + | chr8.4:7679604-7679623 | None:intergenic | 35.0% | |
| AGATGGTAAACTTCATGTTG+TGG | - | chr8.4:7678810-7678829 | MS.gene012317:intron | 35.0% | |
| AGTGGTGAGTTGTTCAATAA+TGG | - | chr8.4:7679174-7679193 | MS.gene012317:CDS | 35.0% | |
| ATGCACATCATTAGCAGTTA+AGG | + | chr8.4:7680136-7680155 | None:intergenic | 35.0% | |
| ATTCCCATAACAAGTGTGTT+AGG | + | chr8.4:7678550-7678569 | None:intergenic | 35.0% | |
| ATTGAGGATGCATAAGAAGA+GGG | - | chr8.4:7679137-7679156 | MS.gene012317:CDS | 35.0% | |
| ATTTCAACATCCCTTTGTCT+AGG | + | chr8.4:7679693-7679712 | None:intergenic | 35.0% | |
| ATTTCAGCATCAGTTTGAAG+TGG | + | chr8.4:7678784-7678803 | None:intergenic | 35.0% | |
| ATTTCGAAGATGAGACATTG+AGG | - | chr8.4:7679121-7679140 | MS.gene012317:CDS | 35.0% | |
| CACAAAGAAGAAAGATAGCA+TGG | - | chr8.4:7679248-7679267 | MS.gene012317:intron | 35.0% | |
| CAGTTAAGGATTCATGATCA+AGG | + | chr8.4:7680122-7680141 | None:intergenic | 35.0% | |
| CATCCAAATATACTCAGTAC+TGG | - | chr8.4:7680647-7680666 | MS.gene012317:CDS | 35.0% | |
| CCATACATAGCTCTTAAAAG+AGG | + | chr8.4:7678574-7678593 | None:intergenic | 35.0% | |
| CTTACATGTTGCAATTGTTC+AGG | - | chr8.4:7680466-7680485 | MS.gene012317:CDS | 35.0% | |
| CTTCAAACTGATGCTGAAAT+AGG | - | chr8.4:7678784-7678803 | MS.gene012317:intron | 35.0% | |
| GAAAATACCGTTGCATCAAA+AGG | - | chr8.4:7679429-7679448 | MS.gene012317:intron | 35.0% | |
| GTATTCTTTGGCAAACACAA+AGG | + | chr8.4:7680621-7680640 | None:intergenic | 35.0% | |
| TAGTCCAATCAAGACTATCT+TGG | + | chr8.4:7678501-7678520 | None:intergenic | 35.0% | |
| TCATGTGGAACATATTTGGA+AGG | + | chr8.4:7679411-7679430 | None:intergenic | 35.0% | |
| TCTTCGAAATTTGAAGACCT+CGG | + | chr8.4:7679111-7679130 | None:intergenic | 35.0% | |
| TGATTTCTCAGGAAATCTCA+TGG | - | chr8.4:7678594-7678613 | MS.gene012317:intron | 35.0% | |
| TGGATGGAGATTGTATTCTT+TGG | + | chr8.4:7680633-7680652 | None:intergenic | 35.0% | |
| TGGTTAAAACTAGATCCTCT+TGG | + | chr8.4:7678967-7678986 | None:intergenic | 35.0% | |
| TGTGTTAGGAAGAGTTGAAA+GGG | + | chr8.4:7678536-7678555 | None:intergenic | 35.0% | |
| TTAAGATTCCCTTCGGAAAT+AGG | + | chr8.4:7679342-7679361 | None:intergenic | 35.0% | |
| TTCTATGCAATCTTCCAAAG+GGG | - | chr8.4:7679080-7679099 | MS.gene012317:CDS | 35.0% | |
| ! | ACGAGTTGCAACATTTTCTA+TGG | - | chr8.4:7680373-7680392 | MS.gene012317:CDS | 35.0% |
| ! | CAACATTTTCTATGGCTGTA+AGG | - | chr8.4:7680381-7680400 | MS.gene012317:CDS | 35.0% |
| ! | CAAGTCTTATAGGACTTGTT+TGG | - | chr8.4:7679874-7679893 | MS.gene012317:CDS | 35.0% |
| ! | CAGTACTGAGTATATTTGGA+TGG | + | chr8.4:7680649-7680668 | None:intergenic | 35.0% |
| ! | CTATTTGTGTATCCGTGTTT+TGG | + | chr8.4:7679030-7679049 | None:intergenic | 35.0% |
| ! | GTTTTCTCCAAACCATGATA+AGG | + | chr8.4:7679830-7679849 | None:intergenic | 35.0% |
| ! | TCTTCCTAACACACTTGTTA+TGG | - | chr8.4:7678543-7678562 | MS.gene012317:intron | 35.0% |
| ! | TGCATGTTTAAGATTCCCTT+CGG | + | chr8.4:7679349-7679368 | None:intergenic | 35.0% |
| !! | ATGTGCAACTCCTTGTTATT+AGG | + | chr8.4:7679294-7679313 | None:intergenic | 35.0% |
| !! | CCTCTTTTAAGAGCTATGTA+TGG | - | chr8.4:7678571-7678590 | MS.gene012317:intron | 35.0% |
| !! | CTTCCTAACACACTTGTTAT+GGG | - | chr8.4:7678544-7678563 | MS.gene012317:intron | 35.0% |
| !! | TCCATATAAAAAGAGCACCA+AGG | + | chr8.4:7678462-7678481 | None:intergenic | 35.0% |
| !! | TGGTAATGGACCTAATAACA+AGG | - | chr8.4:7679281-7679300 | MS.gene012317:intron | 35.0% |
| !!! | AAAGCTGCTTCTACTGATTT+TGG | - | chr8.4:7679375-7679394 | MS.gene012317:intron | 35.0% |
| !!! | TCCTTGGTGCTCTTTTTATA+TGG | - | chr8.4:7678458-7678477 | MS.gene012317:CDS | 35.0% |
| AAACTAGATCCTCTTGGAGT+TGG | + | chr8.4:7678961-7678980 | None:intergenic | 40.0% | |
| AAAGCATAGGATTTGGAGGA+GGG | + | chr8.4:7679209-7679228 | None:intergenic | 40.0% | |
| AAGAAGAAAGATAGCATGGG+TGG | - | chr8.4:7679252-7679271 | MS.gene012317:intron | 40.0% | |
| ACAAAGGGAACAATACCTTG+GGG | + | chr8.4:7680605-7680624 | None:intergenic | 40.0% | |
| ACAAGTACCTAGACTGAACA+TGG | + | chr8.4:7680238-7680257 | None:intergenic | 40.0% | |
| ACACAAAGGGAACAATACCT+TGG | + | chr8.4:7680607-7680626 | None:intergenic | 40.0% | |
| AGAACATGAGTCCTAGACAA+AGG | - | chr8.4:7679679-7679698 | MS.gene012317:CDS | 40.0% | |
| AGGAGTTGCACATGTTTGTT+TGG | - | chr8.4:7679301-7679320 | MS.gene012317:intron | 40.0% | |
| ATCTCAATACTGTCTGATGC+TGG | - | chr8.4:7680201-7680220 | MS.gene012317:CDS | 40.0% | |
| CACAAAGGGAACAATACCTT+GGG | + | chr8.4:7680606-7680625 | None:intergenic | 40.0% | |
| CATTGAGGATGCATAAGAAG+AGG | - | chr8.4:7679136-7679155 | MS.gene012317:CDS | 40.0% | |
| CTGCAAAAACAGCGACAAAA+CGG | + | chr8.4:7678345-7678364 | None:intergenic | 40.0% | |
| GAACATGAGTCCTAGACAAA+GGG | - | chr8.4:7679680-7679699 | MS.gene012317:CDS | 40.0% | |
| GACAAGACTCATCCTTATCA+TGG | - | chr8.4:7679815-7679834 | MS.gene012317:CDS | 40.0% | |
| GACTCATCCTTATCATGGTT+TGG | - | chr8.4:7679820-7679839 | MS.gene012317:CDS | 40.0% | |
| GATGCTGAAATAGGTGAAGA+TGG | - | chr8.4:7678793-7678812 | MS.gene012317:intron | 40.0% | |
| GCTATGTATGGTGATTTCTC+AGG | - | chr8.4:7678583-7678602 | MS.gene012317:intron | 40.0% | |
| GGTGAGTTGTTCAATAATGG+TGG | - | chr8.4:7679177-7679196 | MS.gene012317:CDS | 40.0% | |
| GTGAATCAGCTGCTAAGAAA+TGG | + | chr8.4:7678423-7678442 | None:intergenic | 40.0% | |
| GTGTGTTAGGAAGAGTTGAA+AGG | + | chr8.4:7678537-7678556 | None:intergenic | 40.0% | |
| GTTATAGAAGCTGCAGTTTC+AGG | + | chr8.4:7678715-7678734 | None:intergenic | 40.0% | |
| TCAATAGCAATTGGTATGCG+TGG | - | chr8.4:7680437-7680456 | MS.gene012317:CDS | 40.0% | |
| TGAATATGCAGGTCTGTTCA+TGG | - | chr8.4:7680319-7680338 | MS.gene012317:CDS | 40.0% | |
| TTCACACCAGATCAATGTTC+TGG | - | chr8.4:7678313-7678332 | MS.gene012317:intron | 40.0% | |
| TTGAGGATGCATAAGAAGAG+GGG | - | chr8.4:7679138-7679157 | MS.gene012317:CDS | 40.0% | |
| TTTCCACATGCAATCAGCTT+AGG | + | chr8.4:7680353-7680372 | None:intergenic | 40.0% | |
| ! | ACGCATACCAATTGCTATTG+AGG | + | chr8.4:7680438-7680457 | None:intergenic | 40.0% |
| ! | AGCATCAGACAGTATTGAGA+TGG | + | chr8.4:7680202-7680221 | None:intergenic | 40.0% |
| ! | AGTCTTGTCATAACACTTGC+TGG | + | chr8.4:7679804-7679823 | None:intergenic | 40.0% |
| ! | CTTGTAGAACCAGAAAGCAT+AGG | + | chr8.4:7679222-7679241 | None:intergenic | 40.0% |
| ! | GAACCAGAAAGCATAGGATT+TGG | + | chr8.4:7679216-7679235 | None:intergenic | 40.0% |
| ! | GATGCAACGGTATTTTCATG+TGG | + | chr8.4:7679426-7679445 | None:intergenic | 40.0% |
| ! | TCTGACGTTGTTTCGCTTAA+TGG | - | chr8.4:7678751-7678770 | MS.gene012317:intron | 40.0% |
| AAGAAAGATAGCATGGGTGG+TGG | - | chr8.4:7679255-7679274 | MS.gene012317:intron | 45.0% | |
| AAGATTGCACGGACGTTTGA+CGG | + | chr8.4:7679593-7679612 | None:intergenic | 45.0% | |
| AGTGCTTCACCTATTTCCGA+AGG | - | chr8.4:7679330-7679349 | MS.gene012317:intron | 45.0% | |
| ATGGCTGTAAGGTTCTTGAC+CGG | - | chr8.4:7680392-7680411 | MS.gene012317:CDS | 45.0% | |
| CCACGAGCTTCAAATCTAAC+CGG | - | chr8.4:7678901-7678920 | MS.gene012317:intron | 45.0% | |
| CCTCCAAATCCTATGCTTTC+TGG | - | chr8.4:7679210-7679229 | MS.gene012317:intron | 45.0% | |
| CTAATGATGTGCATGCATGC+AGG | - | chr8.4:7680142-7680161 | MS.gene012317:CDS | 45.0% | |
| CTTCCAAGTCCATCTTCTTC+TGG | + | chr8.4:7679746-7679765 | None:intergenic | 45.0% | |
| GTGCTTCACCTATTTCCGAA+GGG | - | chr8.4:7679331-7679350 | MS.gene012317:intron | 45.0% | |
| TAGCATACGGTTCAGTTCGT+TGG | - | chr8.4:7678281-7678300 | MS.gene012317:intron | 45.0% | |
| TCAAGAGAACCAACTCCAAG+AGG | - | chr8.4:7678949-7678968 | MS.gene012317:intron | 45.0% | |
| ! | AAGAAGATGGACTTGGAAGG+AGG | - | chr8.4:7679747-7679766 | MS.gene012317:CDS | 45.0% |
| ! | ATACTGTCTGATGCTGGTCT+TGG | - | chr8.4:7680207-7680226 | MS.gene012317:CDS | 45.0% |
| ! | CAGAAGAAGATGGACTTGGA+AGG | - | chr8.4:7679744-7679763 | MS.gene012317:CDS | 45.0% |
| ! | CCAGAAAGCATAGGATTTGG+AGG | + | chr8.4:7679213-7679232 | None:intergenic | 45.0% |
| ! | CTTGTCATAACACTTGCTGG+AGG | + | chr8.4:7679801-7679820 | None:intergenic | 45.0% |
| ! | GAAAGCATAGGATTTGGAGG+AGG | + | chr8.4:7679210-7679229 | None:intergenic | 45.0% |
| ! | TAGCCAGAAGAAGATGGACT+TGG | - | chr8.4:7679740-7679759 | MS.gene012317:CDS | 45.0% |
| !! | ATGGGTGGTGGAAATGGTAA+TGG | - | chr8.4:7679267-7679286 | MS.gene012317:intron | 45.0% |
| !! | CGGCGCTTTACTTTGAAACA+TGG | + | chr8.4:7679004-7679023 | None:intergenic | 45.0% |
| !! | CTTTCTGGTTCTACAAGTGC+TGG | - | chr8.4:7679225-7679244 | MS.gene012317:intron | 45.0% |
| !! | GTGTATCCGTGTTTTGGACT+CGG | + | chr8.4:7679024-7679043 | None:intergenic | 45.0% |
| AGGATGCATAAGAAGAGGGG+AGG | - | chr8.4:7679141-7679160 | MS.gene012317:CDS | 50.0% | |
| CAGCCTAAGCTGATTGCATG+TGG | - | chr8.4:7680347-7680366 | MS.gene012317:CDS | 50.0% | |
| CATACGGTTCAGTTCGTTGG+TGG | - | chr8.4:7678284-7678303 | MS.gene012317:intron | 50.0% | |
| GCGGCAACCTCAATAGCAAT+TGG | - | chr8.4:7680428-7680447 | MS.gene012317:CDS | 50.0% | |
| GGAATGGCCATGTTCAGTCT+AGG | - | chr8.4:7680228-7680247 | MS.gene012317:CDS | 50.0% | |
| GGATGCATAAGAAGAGGGGA+GGG | - | chr8.4:7679142-7679161 | MS.gene012317:CDS | 50.0% | |
| ! | AAGATGGACTTGGAAGGAGG+AGG | - | chr8.4:7679750-7679769 | MS.gene012317:CDS | 50.0% |
| ! | AGATGGACTTGGAAGGAGGA+GGG | - | chr8.4:7679751-7679770 | MS.gene012317:CDS | 50.0% |
| ! | CCGGTTAGATTTGAAGCTCG+TGG | + | chr8.4:7678904-7678923 | None:intergenic | 50.0% |
| !! | AAAGCGCCGAGTCCAAAACA+CGG | - | chr8.4:7679015-7679034 | MS.gene012317:CDS | 50.0% |
| !! | GATAGCATGGGTGGTGGAAA+TGG | - | chr8.4:7679261-7679280 | MS.gene012317:intron | 50.0% |
| !! | GTCTGATGCTGGTCTTGGAA+TGG | - | chr8.4:7680212-7680231 | MS.gene012317:CDS | 50.0% |
| TGCATAAGAAGAGGGGAGGG+AGG | - | chr8.4:7679145-7679164 | MS.gene012317:CDS | 55.0% | |
| ! | GATGGACTTGGAAGGAGGAG+GGG | - | chr8.4:7679752-7679771 | MS.gene012317:CDS | 55.0% |
| AGACCTCGGAGTAGCCCCTT+TGG | + | chr8.4:7679097-7679116 | None:intergenic | 60.0% | |
| CTTCCAAAGGGGCTACTCCG+AGG | - | chr8.4:7679091-7679110 | MS.gene012317:CDS | 60.0% | |
| GACCGGTCCAGCTGTGATTG+CGG | - | chr8.4:7680409-7680428 | MS.gene012317:CDS | 60.0% | |
| GAGGTTGCCGCAATCACAGC+TGG | + | chr8.4:7680419-7680438 | None:intergenic | 60.0% | |
| TGCCGCAATCACAGCTGGAC+CGG | + | chr8.4:7680414-7680433 | None:intergenic | 60.0% | |
| TTGCAGGCTGCACTTCCCCA+AGG | - | chr8.4:7680587-7680606 | MS.gene012317:CDS | 60.0% | |
| ! | AGGGGAGGGAGGAGTATGAG+TGG | - | chr8.4:7679156-7679175 | MS.gene012317:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 7678214 | 7680669 | 7678214 | ID=MS.gene012317 |
| chr8.4 | mRNA | 7678214 | 7680669 | 7678214 | ID=MS.gene012317.t1;Parent=MS.gene012317 |
| chr8.4 | exon | 7679433 | 7680669 | 7679433 | ID=MS.gene012317.t1.exon1;Parent=MS.gene012317.t1 |
| chr8.4 | CDS | 7679433 | 7680669 | 7679433 | ID=cds.MS.gene012317.t1;Parent=MS.gene012317.t1 |
| chr8.4 | exon | 7678970 | 7679222 | 7678970 | ID=MS.gene012317.t1.exon2;Parent=MS.gene012317.t1 |
| chr8.4 | CDS | 7678970 | 7679222 | 7678970 | ID=cds.MS.gene012317.t1;Parent=MS.gene012317.t1 |
| chr8.4 | exon | 7678634 | 7678719 | 7678634 | ID=MS.gene012317.t1.exon3;Parent=MS.gene012317.t1 |
| chr8.4 | CDS | 7678634 | 7678719 | 7678634 | ID=cds.MS.gene012317.t1;Parent=MS.gene012317.t1 |
| chr8.4 | exon | 7678396 | 7678553 | 7678396 | ID=MS.gene012317.t1.exon4;Parent=MS.gene012317.t1 |
| chr8.4 | CDS | 7678396 | 7678553 | 7678396 | ID=cds.MS.gene012317.t1;Parent=MS.gene012317.t1 |
| chr8.4 | exon | 7678214 | 7678290 | 7678214 | ID=MS.gene012317.t1.exon5;Parent=MS.gene012317.t1 |
| chr8.4 | CDS | 7678214 | 7678290 | 7678214 | ID=cds.MS.gene012317.t1;Parent=MS.gene012317.t1 |
| Gene Sequence |
| Protein sequence |
