Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026690.t1 | XP_013466414.1 | 94.1 | 506 | 30 | 0 | 1 | 506 | 1 | 506 | 4.50E-263 | 916.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026690.t1 | Q9SQH6 | 62.4 | 558 | 147 | 12 | 1 | 505 | 1 | 548 | 2.8e-173 | 609.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026690.t1 | Q673E8 | 94.1 | 506 | 30 | 0 | 1 | 506 | 1 | 506 | 3.3e-263 | 916.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene96328 | MS.gene026690 | PPI |
MS.gene073338 | MS.gene026690 | PPI |
MS.gene012317 | MS.gene026690 | PPI |
MS.gene026690 | MS.gene96362 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026690.t1 | MTR_1g029190 | 97.233 | 506 | 14 | 0 | 1 | 506 | 1 | 506 | 0.0 | 1006 |
MS.gene026690.t1 | MTR_8g107360 | 53.042 | 526 | 204 | 9 | 1 | 506 | 1 | 503 | 6.51e-177 | 508 |
MS.gene026690.t1 | MTR_7g089360 | 49.914 | 579 | 208 | 15 | 1 | 506 | 1 | 570 | 1.63e-169 | 491 |
MS.gene026690.t1 | MTR_7g089360 | 49.914 | 579 | 208 | 15 | 1 | 506 | 1 | 570 | 2.41e-169 | 491 |
MS.gene026690.t1 | MTR_6g069510 | 47.297 | 592 | 217 | 16 | 1 | 506 | 1 | 583 | 1.28e-161 | 472 |
MS.gene026690.t1 | MTR_4g127090 | 48.387 | 558 | 224 | 15 | 1 | 506 | 1 | 546 | 3.31e-161 | 469 |
MS.gene026690.t1 | MTR_1g030890 | 45.634 | 607 | 222 | 13 | 1 | 506 | 1 | 600 | 3.73e-160 | 468 |
MS.gene026690.t1 | MTR_2g038470 | 42.639 | 523 | 248 | 11 | 1 | 506 | 1 | 488 | 4.69e-128 | 383 |
MS.gene026690.t1 | MTR_1g030890 | 41.399 | 529 | 202 | 13 | 1 | 428 | 1 | 522 | 6.37e-116 | 352 |
MS.gene026690.t1 | MTR_4g084870 | 54.181 | 299 | 107 | 7 | 1 | 280 | 1 | 288 | 9.84e-95 | 301 |
MS.gene026690.t1 | MTR_4g084870 | 69.281 | 153 | 47 | 0 | 354 | 506 | 486 | 638 | 2.08e-64 | 221 |
MS.gene026690.t1 | MTR_4g127100 | 52.365 | 296 | 122 | 8 | 1 | 287 | 1 | 286 | 7.59e-91 | 288 |
MS.gene026690.t1 | MTR_4g127100 | 48.649 | 111 | 54 | 1 | 323 | 430 | 418 | 528 | 4.80e-25 | 108 |
MS.gene026690.t1 | MTR_4g127100 | 52.365 | 296 | 122 | 8 | 1 | 287 | 1 | 286 | 4.96e-90 | 288 |
MS.gene026690.t1 | MTR_4g127100 | 58.065 | 186 | 75 | 1 | 324 | 506 | 419 | 604 | 1.83e-65 | 223 |
MS.gene026690.t1 | MTR_6g011400 | 52.830 | 159 | 75 | 0 | 348 | 506 | 182 | 340 | 7.00e-51 | 177 |
MS.gene026690.t1 | MTR_6g011400 | 53.797 | 158 | 72 | 1 | 1 | 157 | 1 | 158 | 7.49e-46 | 164 |
MS.gene026690.t1 | MTR_7g009370 | 59.124 | 137 | 56 | 0 | 370 | 506 | 200 | 336 | 1.57e-50 | 176 |
MS.gene026690.t1 | MTR_7g009370 | 52.532 | 158 | 75 | 0 | 1 | 158 | 1 | 158 | 6.02e-47 | 167 |
MS.gene026690.t1 | MTR_7g079720 | 43.860 | 171 | 85 | 2 | 342 | 506 | 175 | 340 | 4.92e-42 | 154 |
MS.gene026690.t1 | MTR_7g079720 | 47.097 | 155 | 82 | 0 | 1 | 155 | 1 | 155 | 2.70e-41 | 152 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026690.t1 | AT1G77110 | 63.441 | 558 | 141 | 12 | 1 | 505 | 1 | 548 | 0.0 | 662 |
MS.gene026690.t1 | AT1G77110 | 63.441 | 558 | 141 | 12 | 1 | 505 | 1 | 548 | 0.0 | 662 |
MS.gene026690.t1 | AT1G73590 | 48.675 | 604 | 207 | 15 | 1 | 505 | 1 | 600 | 9.04e-158 | 462 |
MS.gene026690.t1 | AT1G70940 | 45.136 | 627 | 215 | 16 | 1 | 506 | 1 | 619 | 3.88e-156 | 459 |
MS.gene026690.t1 | AT2G01420 | 45.349 | 602 | 222 | 15 | 1 | 506 | 1 | 591 | 1.23e-155 | 457 |
MS.gene026690.t1 | AT1G23080 | 46.578 | 599 | 222 | 17 | 1 | 506 | 1 | 594 | 1.44e-155 | 457 |
MS.gene026690.t1 | AT1G23080 | 46.578 | 599 | 222 | 17 | 1 | 506 | 1 | 594 | 1.44e-155 | 457 |
MS.gene026690.t1 | AT1G23080 | 46.269 | 603 | 222 | 17 | 1 | 506 | 1 | 598 | 6.07e-155 | 455 |
MS.gene026690.t1 | AT1G23080 | 43.378 | 521 | 197 | 17 | 1 | 428 | 1 | 516 | 1.44e-117 | 356 |
MS.gene026690.t1 | AT2G01420 | 52.824 | 301 | 118 | 8 | 1 | 287 | 1 | 291 | 7.23e-92 | 290 |
MS.gene026690.t1 | AT2G01420 | 31.599 | 269 | 147 | 8 | 181 | 428 | 265 | 517 | 4.15e-22 | 99.8 |
MS.gene026690.t1 | AT2G01420 | 48.703 | 347 | 145 | 10 | 1 | 325 | 1 | 336 | 5.80e-91 | 290 |
MS.gene026690.t1 | AT2G01420 | 39.481 | 347 | 173 | 8 | 181 | 506 | 265 | 595 | 1.03e-60 | 210 |
MS.gene026690.t1 | AT5G57090 | 52.921 | 291 | 101 | 6 | 1 | 282 | 1 | 264 | 1.36e-88 | 285 |
MS.gene026690.t1 | AT5G57090 | 60.847 | 189 | 61 | 1 | 317 | 505 | 450 | 625 | 7.34e-66 | 224 |
MS.gene026690.t1 | AT5G57090 | 60.847 | 189 | 61 | 1 | 317 | 505 | 350 | 525 | 5.76e-67 | 225 |
MS.gene026690.t1 | AT5G57090 | 48.691 | 191 | 62 | 6 | 101 | 282 | 1 | 164 | 1.30e-39 | 151 |
MS.gene026690.t1 | AT5G16530 | 51.095 | 137 | 67 | 0 | 370 | 506 | 192 | 328 | 3.92e-44 | 159 |
MS.gene026690.t1 | AT5G16530 | 42.778 | 180 | 94 | 1 | 1 | 180 | 1 | 171 | 2.21e-42 | 154 |
MS.gene026690.t1 | AT5G16530 | 51.095 | 137 | 67 | 0 | 370 | 506 | 192 | 328 | 7.29e-44 | 159 |
MS.gene026690.t1 | AT5G16530 | 42.778 | 180 | 94 | 1 | 1 | 180 | 1 | 171 | 6.24e-42 | 153 |
MS.gene026690.t1 | AT5G15100 | 54.015 | 137 | 63 | 0 | 370 | 506 | 210 | 346 | 1.10e-42 | 155 |
MS.gene026690.t1 | AT5G15100 | 47.879 | 165 | 81 | 1 | 1 | 160 | 1 | 165 | 2.87e-42 | 155 |
Find 125 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTACTGGCAGTTTGGTCTTT+TGG | 0.168241 | 1.2:-15175504 | None:intergenic |
CATTCCCATGGCTGCTCTTT+TGG | 0.171053 | 1.2:-15177388 | None:intergenic |
TGGCGGTGGTACGCCTGTTT+GGG | 0.230493 | 1.2:+15172151 | MS.gene026690:CDS |
TTTGTATTTGCAAGGGAATA+TGG | 0.230500 | 1.2:+15177731 | MS.gene026690:CDS |
TTGTTCTTCAATGCATTATA+TGG | 0.250941 | 1.2:+15170813 | MS.gene026690:CDS |
CAATCAGAAACCGACGAAAA+TGG | 0.270747 | 1.2:+15171882 | MS.gene026690:CDS |
TTGGCGGTGGTACGCCTGTT+TGG | 0.279672 | 1.2:+15172150 | MS.gene026690:CDS |
ATGGAGGCTGCTGTTGTTCC+TGG | 0.291840 | 1.2:-15171795 | None:intergenic |
CCAAATGATGAGGGTGATTC+TGG | 0.296279 | 1.2:-15171948 | None:intergenic |
CTGCTGTTGTTCCTGGAAAC+TGG | 0.296537 | 1.2:-15171788 | None:intergenic |
TGGCCATTAGATTTCTCTTT+GGG | 0.297092 | 1.2:+15177409 | MS.gene026690:CDS |
TTTGCAATGCTAGTTGCTTA+TGG | 0.301450 | 1.2:+15170458 | MS.gene026690:CDS |
TTTGCCTAATACCCTTGTTA+TGG | 0.309374 | 1.2:+15170730 | MS.gene026690:CDS |
GATAGATGATTTGATCAAAC+TGG | 0.309603 | 1.2:-15176609 | None:intergenic |
TTGCCTAATACCCTTGTTAT+GGG | 0.317192 | 1.2:+15170731 | MS.gene026690:CDS |
AATACATATTCTAGTCTATT+AGG | 0.318510 | 1.2:+15175603 | MS.gene026690:CDS |
GAGAGATTAGAGAGTCTTGT+AGG | 0.323284 | 1.2:-15171984 | None:intergenic |
TTTCTTTACTAGAGGTTCAT+TGG | 0.330036 | 1.2:+15170676 | MS.gene026690:CDS |
TGAACCTCTAGTAAAGAAAA+TGG | 0.333771 | 1.2:-15170672 | None:intergenic |
CCCCTGCCACTGAGACTTTG+AGG | 0.335597 | 1.2:-15175470 | None:intergenic |
ATGGCCATTAGATTTCTCTT+TGG | 0.346257 | 1.2:+15177408 | MS.gene026690:CDS |
TTACTAGAGGTTCATTGGAT+TGG | 0.349810 | 1.2:+15170681 | MS.gene026690:CDS |
TACTAGAGGTTCATTGGATT+GGG | 0.351872 | 1.2:+15170682 | MS.gene026690:CDS |
TTTATGCCGGAACATTGATC+TGG | 0.356548 | 1.2:-15170509 | None:intergenic |
CTTAGCATTACAAAGGTATA+TGG | 0.357756 | 1.2:-15175537 | None:intergenic |
TACCCTGTGCTCAAAATATC+AGG | 0.359873 | 1.2:-15177761 | None:intergenic |
GGTGGCCGGAGGTAGGGTTT+TGG | 0.360012 | 1.2:+15172184 | MS.gene026690:CDS |
CCTTCTTGCCGCCATTTCTC+AGG | 0.364000 | 1.2:-15172233 | None:intergenic |
AAAATTCCCCGGCGTGTTGA+TGG | 0.364452 | 1.2:-15172024 | None:intergenic |
GGTCTCCGGTGGCCGGAGGT+AGG | 0.365431 | 1.2:+15172177 | MS.gene026690:CDS |
ATCATATCTGATGCAGGTCT+TGG | 0.367385 | 1.2:+15176635 | MS.gene026690:CDS |
TTGATCAAAAGCCAGTTTCC+AGG | 0.376559 | 1.2:+15171777 | MS.gene026690:CDS |
ATACCCATAACAAGGGTATT+AGG | 0.378279 | 1.2:-15170734 | None:intergenic |
CTAGTCTATTAGGACTTCTA+TGG | 0.391228 | 1.2:+15175613 | MS.gene026690:CDS |
TTGTATTTGCAAGGGAATAT+GGG | 0.395474 | 1.2:+15177732 | MS.gene026690:CDS |
AGGCTTATACTTATTGTAGT+TGG | 0.396707 | 1.2:+15175558 | MS.gene026690:CDS |
AGCGTCTGTCGAAGCATAAC+CGG | 0.397608 | 1.2:-15172075 | None:intergenic |
TTTAATGAAATGGAGATAGT+TGG | 0.410271 | 1.2:+15172131 | MS.gene026690:CDS |
TCTCAACAATCCTTATCAAA+TGG | 0.412474 | 1.2:+15170583 | MS.gene026690:CDS |
GGGATGGCAATGTTTAGCTT+AGG | 0.417296 | 1.2:+15176656 | MS.gene026690:CDS |
TTCACCCCAGATCAATGTTC+CGG | 0.418222 | 1.2:+15170503 | MS.gene026690:CDS |
AGGAAATGGAGCGTCGGATT+CGG | 0.420449 | 1.2:-15171917 | None:intergenic |
TCATTATCCTCCATTGCTGT+TGG | 0.424713 | 1.2:+15177444 | MS.gene026690:CDS |
CCAGAATCACCCTCATCATT+TGG | 0.425923 | 1.2:+15171948 | MS.gene026690:CDS |
TTCTGGTGGTGCTGAGGAAA+TGG | 0.427408 | 1.2:-15171931 | None:intergenic |
GTCGGATTCGGACTTTGATT+CGG | 0.436726 | 1.2:-15171905 | None:intergenic |
ATTCCTTGCAGCCGACGCCT+AGG | 0.438173 | 1.2:+15172099 | MS.gene026690:CDS |
ATGAAGTGAAAAGATAGAAC+TGG | 0.440332 | 1.2:-15170557 | None:intergenic |
GTCTCCGGTGGCCGGAGGTA+GGG | 0.442567 | 1.2:+15172178 | MS.gene026690:CDS |
TATTCCCTTGCAAATACAAA+TGG | 0.442756 | 1.2:-15177728 | None:intergenic |
TGGCTGCTCTGTATTCTAGT+AGG | 0.443656 | 1.2:-15171749 | None:intergenic |
AATAGACTAGAATATGTATT+CGG | 0.444754 | 1.2:-15175600 | None:intergenic |
CTGAGAAATGGCGGCAAGAA+GGG | 0.455377 | 1.2:+15172234 | MS.gene026690:CDS |
AGCCTCAAAGTCTCAGTGGC+AGG | 0.457594 | 1.2:+15175468 | MS.gene026690:CDS |
GGGAGGTCTCCGGTGGCCGG+AGG | 0.457913 | 1.2:+15172173 | MS.gene026690:CDS |
AGTAAAGAAAATGGCCCAAA+TGG | 0.461170 | 1.2:-15170663 | None:intergenic |
GGATGGAGGAAGGGTGGTGT+GGG | 0.461264 | 1.2:+15172205 | MS.gene026690:CDS |
GGCGGTGGTACGCCTGTTTG+GGG | 0.463813 | 1.2:+15172152 | MS.gene026690:CDS |
CCTCTTCTTCAAGCTATGTA+TGG | 0.463865 | 1.2:+15170758 | MS.gene026690:CDS |
CCTGAGAAATGGCGGCAAGA+AGG | 0.474880 | 1.2:+15172233 | MS.gene026690:CDS |
TGCAAGGACATTACTATGTC+AGG | 0.486885 | 1.2:+15172266 | MS.gene026690:CDS |
CGCCCTAGGCGTCGGCTGCA+AGG | 0.487343 | 1.2:-15172102 | None:intergenic |
TGGATGGAGGAAGGGTGGTG+TGG | 0.488703 | 1.2:+15172204 | MS.gene026690:CDS |
ACTAGCATTGCAAAATATAG+AGG | 0.489836 | 1.2:-15170449 | None:intergenic |
AGGCCCAAAGAGAAATCTAA+TGG | 0.490193 | 1.2:-15177412 | None:intergenic |
TCATTAAAATTCGACGCCCT+AGG | 0.492170 | 1.2:-15172116 | None:intergenic |
TCATATCTGATGCAGGTCTT+GGG | 0.493778 | 1.2:+15176636 | MS.gene026690:CDS |
GCGGTCCGTCGTGGCTGTAG+AGG | 0.496006 | 1.2:-15171851 | None:intergenic |
TTATGCCGGAACATTGATCT+GGG | 0.497144 | 1.2:-15170508 | None:intergenic |
CATATACCTTTGTAATGCTA+AGG | 0.503202 | 1.2:+15175538 | MS.gene026690:CDS |
TTCCTTGCAGCCGACGCCTA+GGG | 0.506704 | 1.2:+15172100 | MS.gene026690:CDS |
TCCATTGCTGTTGGATTGAG+AGG | 0.507982 | 1.2:+15177453 | MS.gene026690:CDS |
AATGAAATGGAGATAGTTGG+CGG | 0.511544 | 1.2:+15172134 | MS.gene026690:CDS |
TCCTCTCAATCCAACAGCAA+TGG | 0.513637 | 1.2:-15177454 | None:intergenic |
TAGTTCCATTTGTATTTGCA+AGG | 0.519175 | 1.2:+15177723 | MS.gene026690:CDS |
ATCAAGATCATATCTGATGC+AGG | 0.520048 | 1.2:+15176629 | MS.gene026690:CDS |
GGAAATTACATCGTCGTCGA+GGG | 0.522755 | 1.2:-15171829 | None:intergenic |
CGGTCCGTCGTGGCTGTAGA+GGG | 0.528508 | 1.2:-15171850 | None:intergenic |
TGGTACCAAAAGAGCAGCCA+TGG | 0.542418 | 1.2:+15177383 | MS.gene026690:CDS |
TGTGGGAATCACCTGAGAAA+TGG | 0.545016 | 1.2:+15172222 | MS.gene026690:CDS |
GTGACAAGTCCACAGCTGTC+CGG | 0.547058 | 1.2:+15172056 | MS.gene026690:CDS |
GCCTCAAAGTCTCAGTGGCA+GGG | 0.554138 | 1.2:+15175469 | MS.gene026690:CDS |
ATTGCATACTGCAATTGTAC+AGG | 0.554403 | 1.2:+15177482 | MS.gene026690:CDS |
AAAACCCTACCTCCGGCCAC+CGG | 0.555614 | 1.2:-15172182 | None:intergenic |
GGGAAATTACATCGTCGTCG+AGG | 0.560247 | 1.2:-15171830 | None:intergenic |
CTCAGTGGCAGGGGAAGCTG+TGG | 0.563677 | 1.2:+15175479 | MS.gene026690:CDS |
CCTCAAAGTCTCAGTGGCAG+GGG | 0.565386 | 1.2:+15175470 | MS.gene026690:CDS |
AGTTCCATTTGTATTTGCAA+GGG | 0.566953 | 1.2:+15177724 | MS.gene026690:CDS |
CAAAAGAGCAGCCATGGGAA+TGG | 0.567669 | 1.2:+15177389 | MS.gene026690:CDS |
TCCATCCAAAACCCTACCTC+CGG | 0.572343 | 1.2:-15172189 | None:intergenic |
AAATTCGACGCCCTAGGCGT+CGG | 0.588580 | 1.2:-15172110 | None:intergenic |
CAGCCTCGTATCATTGCTTG+TGG | 0.591964 | 1.2:+15177363 | MS.gene026690:CDS |
ATCTGATGCAGGTCTTGGGA+TGG | 0.592991 | 1.2:+15176640 | MS.gene026690:CDS |
CATACATAGCTTGAAGAAGA+GGG | 0.594874 | 1.2:-15170757 | None:intergenic |
AAATCTAATGGCCATTCCCA+TGG | 0.594974 | 1.2:-15177400 | None:intergenic |
TGAGAAATGGCGGCAAGAAG+GGG | 0.596132 | 1.2:+15172235 | MS.gene026690:CDS |
ATAGATGATTTGATCAAACT+GGG | 0.601340 | 1.2:-15176608 | None:intergenic |
TCTCAATCCAACAGCAATGG+AGG | 0.601806 | 1.2:-15177451 | None:intergenic |
CCATACATAGCTTGAAGAAG+AGG | 0.603719 | 1.2:-15170758 | None:intergenic |
TCTCAGGCTGCTCTTCCACA+AGG | 0.606291 | 1.2:+15177698 | MS.gene026690:intron |
GATGGAAAAGATGTCGGCGT+TGG | 0.606504 | 1.2:-15172006 | None:intergenic |
CGTGTTGATGGAAAAGATGT+CGG | 0.609734 | 1.2:-15172012 | None:intergenic |
TGCGACGAATCGGTTTATGC+CGG | 0.611844 | 1.2:-15170522 | None:intergenic |
GAAGAGGGATACCCATAACA+AGG | 0.611918 | 1.2:-15170742 | None:intergenic |
GAAGCATAACCGGACAGCTG+TGG | 0.616201 | 1.2:-15172065 | None:intergenic |
GAGGATAATGACATTACAAG+AGG | 0.617762 | 1.2:-15177432 | None:intergenic |
GTTTCTGATTGCGTTGTGAG+CGG | 0.622937 | 1.2:-15171870 | None:intergenic |
TATAAGCCTTAGCATTACAA+AGG | 0.630191 | 1.2:-15175544 | None:intergenic |
GAGAAATGGCGGCAAGAAGG+GGG | 0.634290 | 1.2:+15172236 | MS.gene026690:CDS |
GCGGTGGTACGCCTGTTTGG+GGG | 0.642781 | 1.2:+15172153 | MS.gene026690:CDS |
GTGCTGAGGAAATGGAGCGT+CGG | 0.647421 | 1.2:-15171923 | None:intergenic |
AGACAGCCTCAAAGTCTCAG+TGG | 0.648083 | 1.2:+15175464 | MS.gene026690:CDS |
ACAAATGGAACTATTCCTTG+TGG | 0.650251 | 1.2:-15177713 | None:intergenic |
GGGAATCACCTGAGAAATGG+CGG | 0.665536 | 1.2:+15172225 | MS.gene026690:CDS |
GGTACCAAAAGAGCAGCCAT+GGG | 0.666982 | 1.2:+15177384 | MS.gene026690:CDS |
GAAATGGAGATAGTTGGCGG+TGG | 0.673160 | 1.2:+15172137 | MS.gene026690:CDS |
GGGTGATTCTGGTGGTGCTG+AGG | 0.675704 | 1.2:-15171937 | None:intergenic |
ACATTATCGAGAAAATTCCC+CGG | 0.685281 | 1.2:-15172035 | None:intergenic |
ATTTCCCTCTACAGCCACGA+CGG | 0.687674 | 1.2:+15171846 | MS.gene026690:CDS |
GCGTTGTGAGCGGTCCGTCG+TGG | 0.690629 | 1.2:-15171860 | None:intergenic |
TATGCCGGAACATTGATCTG+GGG | 0.696507 | 1.2:-15170507 | None:intergenic |
AAGAGGGATACCCATAACAA+GGG | 0.698897 | 1.2:-15170741 | None:intergenic |
ATACAACGTGATGTGTGCAA+TGG | 0.702571 | 1.2:+15170424 | MS.gene026690:CDS |
GTACCACAAGCAATGATACG+AGG | 0.729485 | 1.2:-15177366 | None:intergenic |
AATGATGAGGGTGATTCTGG+TGG | 0.732883 | 1.2:-15171945 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 15170404 | 15177784 | 15170404 | ID=MS.gene026690 |
chr1.2 | mRNA | 15170404 | 15177784 | 15170404 | ID=MS.gene026690.t1;Parent=MS.gene026690 |
chr1.2 | exon | 15170404 | 15170834 | 15170404 | ID=MS.gene026690.t1.exon1;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15170404 | 15170834 | 15170404 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
chr1.2 | exon | 15171731 | 15172287 | 15171731 | ID=MS.gene026690.t1.exon2;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15171731 | 15172287 | 15171731 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
chr1.2 | exon | 15175445 | 15175652 | 15175445 | ID=MS.gene026690.t1.exon3;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15175445 | 15175652 | 15175445 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
chr1.2 | exon | 15176592 | 15176677 | 15176592 | ID=MS.gene026690.t1.exon4;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15176592 | 15176677 | 15176592 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
chr1.2 | exon | 15177346 | 15177503 | 15177346 | ID=MS.gene026690.t1.exon5;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15177346 | 15177503 | 15177346 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
chr1.2 | exon | 15177704 | 15177784 | 15177704 | ID=MS.gene026690.t1.exon6;Parent=MS.gene026690.t1 |
chr1.2 | CDS | 15177704 | 15177784 | 15177704 | ID=cds.MS.gene026690.t1;Parent=MS.gene026690.t1 |
Gene Sequence |
Protein sequence |