Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32322.t1 | XP_013466414.1 | 93.3 | 510 | 34 | 0 | 1 | 510 | 1 | 510 | 3.90E-262 | 913.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32322.t1 | Q9SQH6 | 62.2 | 558 | 148 | 12 | 1 | 505 | 1 | 548 | 5.5e-172 | 605.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32322.t1 | Q673E8 | 93.3 | 510 | 34 | 0 | 1 | 510 | 1 | 510 | 2.8e-262 | 913.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene96328 | MS.gene32322 | PPI |
MS.gene012317 | MS.gene32322 | PPI |
MS.gene073338 | MS.gene32322 | PPI |
MS.gene96362 | MS.gene32322 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32322.t1 | MTR_1g029190 | 96.471 | 510 | 18 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1003 |
MS.gene32322.t1 | MTR_8g107360 | 53.008 | 532 | 203 | 11 | 1 | 510 | 1 | 507 | 2.77e-177 | 509 |
MS.gene32322.t1 | MTR_7g089360 | 49.571 | 583 | 212 | 15 | 1 | 510 | 1 | 574 | 2.10e-168 | 489 |
MS.gene32322.t1 | MTR_7g089360 | 49.655 | 580 | 210 | 15 | 1 | 507 | 1 | 571 | 3.54e-168 | 488 |
MS.gene32322.t1 | MTR_4g127090 | 48.043 | 562 | 228 | 15 | 1 | 510 | 1 | 550 | 2.54e-160 | 468 |
MS.gene32322.t1 | MTR_6g069510 | 46.980 | 596 | 221 | 16 | 1 | 510 | 1 | 587 | 2.98e-160 | 469 |
MS.gene32322.t1 | MTR_1g030890 | 45.336 | 611 | 226 | 13 | 1 | 510 | 1 | 604 | 4.00e-159 | 466 |
MS.gene32322.t1 | MTR_2g038470 | 42.557 | 524 | 249 | 11 | 1 | 507 | 1 | 489 | 4.57e-129 | 385 |
MS.gene32322.t1 | MTR_4g127100 | 43.633 | 534 | 191 | 19 | 1 | 430 | 1 | 528 | 2.84e-120 | 364 |
MS.gene32322.t1 | MTR_1g030890 | 41.399 | 529 | 202 | 13 | 1 | 428 | 1 | 522 | 1.14e-115 | 352 |
MS.gene32322.t1 | MTR_4g084870 | 53.846 | 299 | 108 | 7 | 1 | 280 | 1 | 288 | 6.11e-94 | 300 |
MS.gene32322.t1 | MTR_4g084870 | 69.427 | 157 | 48 | 0 | 354 | 510 | 486 | 642 | 2.39e-66 | 226 |
MS.gene32322.t1 | MTR_4g127100 | 52.027 | 296 | 123 | 8 | 1 | 287 | 1 | 286 | 3.26e-89 | 286 |
MS.gene32322.t1 | MTR_4g127100 | 57.368 | 190 | 78 | 1 | 324 | 510 | 419 | 608 | 2.28e-65 | 223 |
MS.gene32322.t1 | MTR_6g011400 | 52.147 | 163 | 78 | 0 | 348 | 510 | 182 | 344 | 8.77e-52 | 180 |
MS.gene32322.t1 | MTR_6g011400 | 53.797 | 158 | 72 | 1 | 1 | 157 | 1 | 158 | 7.29e-46 | 164 |
MS.gene32322.t1 | MTR_7g009370 | 58.156 | 141 | 59 | 0 | 370 | 510 | 200 | 340 | 1.18e-51 | 180 |
MS.gene32322.t1 | MTR_7g009370 | 52.532 | 158 | 75 | 0 | 1 | 158 | 1 | 158 | 6.52e-47 | 167 |
MS.gene32322.t1 | MTR_7g079720 | 44.000 | 175 | 87 | 2 | 342 | 510 | 175 | 344 | 3.15e-43 | 157 |
MS.gene32322.t1 | MTR_7g079720 | 47.097 | 155 | 82 | 0 | 1 | 155 | 1 | 155 | 3.07e-41 | 152 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32322.t1 | AT1G77110 | 63.262 | 558 | 142 | 12 | 1 | 505 | 1 | 548 | 0.0 | 659 |
MS.gene32322.t1 | AT1G77110 | 63.262 | 558 | 142 | 12 | 1 | 505 | 1 | 548 | 0.0 | 658 |
MS.gene32322.t1 | AT1G70940 | 45.166 | 631 | 217 | 16 | 1 | 510 | 1 | 623 | 3.97e-157 | 462 |
MS.gene32322.t1 | AT1G23080 | 46.434 | 603 | 225 | 17 | 1 | 510 | 1 | 598 | 9.65e-157 | 460 |
MS.gene32322.t1 | AT1G23080 | 46.434 | 603 | 225 | 17 | 1 | 510 | 1 | 598 | 9.65e-157 | 460 |
MS.gene32322.t1 | AT1G23080 | 46.293 | 607 | 224 | 17 | 1 | 510 | 1 | 602 | 4.43e-156 | 459 |
MS.gene32322.t1 | AT2G01420 | 45.230 | 608 | 222 | 16 | 1 | 510 | 1 | 595 | 1.64e-155 | 457 |
MS.gene32322.t1 | AT1G73590 | 47.947 | 609 | 214 | 15 | 1 | 510 | 1 | 605 | 3.77e-155 | 456 |
MS.gene32322.t1 | AT1G23080 | 43.536 | 526 | 189 | 18 | 1 | 428 | 1 | 516 | 2.74e-117 | 356 |
MS.gene32322.t1 | AT2G01420 | 52.492 | 301 | 119 | 8 | 1 | 287 | 1 | 291 | 4.32e-91 | 288 |
MS.gene32322.t1 | AT2G01420 | 31.227 | 269 | 148 | 8 | 181 | 428 | 265 | 517 | 1.68e-21 | 98.2 |
MS.gene32322.t1 | AT2G01420 | 48.415 | 347 | 146 | 10 | 1 | 325 | 1 | 336 | 4.72e-90 | 288 |
MS.gene32322.t1 | AT2G01420 | 39.316 | 351 | 176 | 8 | 181 | 510 | 265 | 599 | 4.16e-61 | 211 |
MS.gene32322.t1 | AT5G57090 | 52.577 | 291 | 102 | 6 | 1 | 282 | 1 | 264 | 9.38e-88 | 283 |
MS.gene32322.t1 | AT5G57090 | 59.794 | 194 | 65 | 1 | 317 | 510 | 450 | 630 | 1.49e-65 | 224 |
MS.gene32322.t1 | AT5G57090 | 59.794 | 194 | 65 | 1 | 317 | 510 | 350 | 530 | 1.63e-66 | 224 |
MS.gene32322.t1 | AT5G57090 | 48.168 | 191 | 63 | 6 | 101 | 282 | 1 | 164 | 9.10e-39 | 149 |
MS.gene32322.t1 | AT5G16530 | 51.064 | 141 | 69 | 0 | 370 | 510 | 192 | 332 | 2.94e-45 | 162 |
MS.gene32322.t1 | AT5G16530 | 42.778 | 180 | 94 | 1 | 1 | 180 | 1 | 171 | 8.10e-42 | 153 |
MS.gene32322.t1 | AT5G16530 | 51.825 | 137 | 66 | 0 | 370 | 506 | 192 | 328 | 4.43e-45 | 161 |
MS.gene32322.t1 | AT5G16530 | 42.778 | 180 | 94 | 1 | 1 | 180 | 1 | 171 | 2.47e-42 | 154 |
MS.gene32322.t1 | AT5G15100 | 53.191 | 141 | 66 | 0 | 370 | 510 | 210 | 350 | 1.58e-43 | 158 |
MS.gene32322.t1 | AT5G15100 | 47.879 | 165 | 81 | 1 | 1 | 160 | 1 | 165 | 3.70e-42 | 154 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCCATGGCTGCTCTTT+TGG | 0.171053 | 1.4:+14247509 | None:intergenic |
CCCTTCTTGCCGCCATTTCT+CGG | 0.182081 | 1.4:+14253354 | None:intergenic |
CTACTGGCAGTTTGGTCTTT+GGG | 0.199063 | 1.4:+14249494 | None:intergenic |
GCTACTGGCAGTTTGGTCTT+TGG | 0.224989 | 1.4:+14249493 | None:intergenic |
TGGCGGTGGTACGCCTGTTT+GGG | 0.230493 | 1.4:-14253437 | MS.gene32322:CDS |
TTTGTATTTGCAAGGGAATA+TGG | 0.230500 | 1.4:-14247166 | MS.gene32322:CDS |
TTGTTCTTCAATGCATTATA+TGG | 0.250941 | 1.4:-14254571 | MS.gene32322:intron |
TTGGCGGTGGTACGCCTGTT+TGG | 0.279672 | 1.4:-14253438 | MS.gene32322:CDS |
CAATCAGAAACCGACGAAAA+TGG | 0.281440 | 1.4:-14253706 | MS.gene32322:CDS |
TTTGCCTAATACTCTTGTTA+TGG | 0.283953 | 1.4:-14254654 | MS.gene32322:CDS |
ATGGAGGCTGCTGTTGTTCC+TGG | 0.291840 | 1.4:+14253793 | None:intergenic |
CCAAATGATGAGGGTGATTC+TGG | 0.296279 | 1.4:+14253640 | None:intergenic |
CTGCTGTTGTTCCTGGAAAC+TGG | 0.296537 | 1.4:+14253800 | None:intergenic |
TGGCCATTAGATTTCTCTTT+GGG | 0.297092 | 1.4:-14247488 | MS.gene32322:CDS |
TTTGCAATGCTAGTTGCTTA+TGG | 0.301450 | 1.4:-14254926 | MS.gene32322:CDS |
AATACATATTCTAGTCTATT+AGG | 0.306731 | 1.4:-14249395 | MS.gene32322:CDS |
GATAGATGATTTGATCAAAC+TGG | 0.309603 | 1.4:+14248387 | None:intergenic |
TTGCCTAATACTCTTGTTAT+GGG | 0.317192 | 1.4:-14254653 | MS.gene32322:CDS |
GAGAGATTAGAGAGTCTTGT+AGG | 0.323284 | 1.4:+14253604 | None:intergenic |
TTTCTTTACTAGAGGTTCAT+TGG | 0.330036 | 1.4:-14254708 | MS.gene32322:CDS |
TGAACCTCTAGTAAAGAAAA+TGG | 0.333771 | 1.4:+14254712 | None:intergenic |
CCCCTGCCACTGAGACTTTG+AGG | 0.335597 | 1.4:+14249528 | None:intergenic |
ATGGCCATTAGATTTCTCTT+TGG | 0.346257 | 1.4:-14247489 | MS.gene32322:CDS |
TTACTAGAGGTTCATTGGAT+TGG | 0.349810 | 1.4:-14254703 | MS.gene32322:CDS |
ATACCCATAACAAGAGTATT+AGG | 0.351376 | 1.4:+14254650 | None:intergenic |
AATAGACTAGAATATGTATT+AGG | 0.351595 | 1.4:+14249398 | None:intergenic |
TACTAGAGGTTCATTGGATT+GGG | 0.351872 | 1.4:-14254702 | MS.gene32322:CDS |
TTTATGCCGGAACATTGATC+TGG | 0.356548 | 1.4:+14254875 | None:intergenic |
TACCCTGTGCTCAAAATATC+AGG | 0.359873 | 1.4:+14247136 | None:intergenic |
GGTGGCCGGAGGTAGGGTTT+TGG | 0.360012 | 1.4:-14253404 | MS.gene32322:CDS |
AAAATTCCCCGGCGTGTTGA+TGG | 0.364452 | 1.4:+14253564 | None:intergenic |
GGTCTCCGGTGGCCGGAGGT+AGG | 0.365431 | 1.4:-14253411 | MS.gene32322:CDS |
ATCATATCTGATGCAGGTCT+TGG | 0.367385 | 1.4:-14248361 | MS.gene32322:CDS |
TTAATCAAAAGCCAGTTTCC+AGG | 0.369124 | 1.4:-14253811 | MS.gene32322:CDS |
CCTTCTTGCCGCCATTTCTC+GGG | 0.386536 | 1.4:+14253355 | None:intergenic |
CTAGTCTATTAGGACTTCTA+TGG | 0.391228 | 1.4:-14249385 | MS.gene32322:CDS |
TTGTATTTGCAAGGGAATAT+GGG | 0.395474 | 1.4:-14247165 | MS.gene32322:CDS |
AGGCTTATACTTATTGTAGT+TGG | 0.396707 | 1.4:-14249440 | MS.gene32322:CDS |
AGCGTCTGTCGAAGCATAAC+CGG | 0.397608 | 1.4:+14253513 | None:intergenic |
AGGAGATGGAGCGTCGGATT+CGG | 0.403473 | 1.4:+14253671 | None:intergenic |
ATAAAGTGAAAAGATAAAAC+TGG | 0.403874 | 1.4:+14254827 | None:intergenic |
TTTAATGAAATGGAGATAGT+TGG | 0.410271 | 1.4:-14253457 | MS.gene32322:CDS |
CCGAGAAATGGCGGCAAGAA+GGG | 0.412024 | 1.4:-14253354 | MS.gene32322:CDS |
TCTCAACAATCCTTATCAAA+TGG | 0.412474 | 1.4:-14254801 | MS.gene32322:CDS |
GGGATGGCAATGTTTAGCTT+AGG | 0.417296 | 1.4:-14248340 | MS.gene32322:intron |
TTCACCCCAGATCAATGTTC+CGG | 0.418222 | 1.4:-14254881 | MS.gene32322:CDS |
TCATTATCCTCCATTGCTGT+TGG | 0.424713 | 1.4:-14247453 | MS.gene32322:CDS |
CCAGAATCACCCTCATCATT+TGG | 0.425923 | 1.4:-14253640 | MS.gene32322:CDS |
TACTGGCAGTTTGGTCTTTG+GGG | 0.434773 | 1.4:+14249495 | None:intergenic |
GTCGGATTCGGACTTTGATT+CGG | 0.436726 | 1.4:+14253683 | None:intergenic |
ATTCCTTGCAGCCGACGCCT+AGG | 0.438173 | 1.4:-14253489 | MS.gene32322:CDS |
CCCGAGAAATGGCGGCAAGA+AGG | 0.442071 | 1.4:-14253355 | MS.gene32322:CDS |
GTCTCCGGTGGCCGGAGGTA+GGG | 0.442567 | 1.4:-14253410 | MS.gene32322:CDS |
TATTCCCTTGCAAATACAAA+TGG | 0.442756 | 1.4:+14247169 | None:intergenic |
AGCCTCAAAGTCTCAGTGGC+AGG | 0.457594 | 1.4:-14249530 | MS.gene32322:CDS |
GGGAGGTCTCCGGTGGCCGG+AGG | 0.457913 | 1.4:-14253415 | MS.gene32322:CDS |
AGTAAAGAAAATGGCCCAAA+TGG | 0.461170 | 1.4:+14254721 | None:intergenic |
GGATGGAGGAAGGGTGGTGT+GGG | 0.461264 | 1.4:-14253383 | MS.gene32322:CDS |
GGCGGTGGTACGCCTGTTTG+GGG | 0.463813 | 1.4:-14253436 | MS.gene32322:CDS |
CCTCTTCTTCAAGCTATGTA+TGG | 0.463865 | 1.4:-14254626 | MS.gene32322:CDS |
CTTAGCATTACAAAGGCATA+TGG | 0.465629 | 1.4:+14249461 | None:intergenic |
TTCTGGTGGTGCTGAGGAGA+TGG | 0.477689 | 1.4:+14253657 | None:intergenic |
TGGCTGCTCTGTACTCTAGT+AGG | 0.483605 | 1.4:+14253839 | None:intergenic |
TGCAAGGACATTACTATGTC+AGG | 0.486885 | 1.4:-14253322 | MS.gene32322:intron |
CGCCCTAGGCGTCGGCTGCA+AGG | 0.487343 | 1.4:+14253486 | None:intergenic |
TGGATGGAGGAAGGGTGGTG+TGG | 0.488703 | 1.4:-14253384 | MS.gene32322:CDS |
TGTGGGAATCACCCGAGAAA+TGG | 0.489995 | 1.4:-14253366 | MS.gene32322:CDS |
AGGCCCAAAGAGAAATCTAA+TGG | 0.490193 | 1.4:+14247485 | None:intergenic |
TCATTAAAATTCGACGCCCT+AGG | 0.492170 | 1.4:+14253472 | None:intergenic |
GTGCTCAGAAGAAGAAATGA+TGG | 0.493339 | 1.4:-14246673 | None:intergenic |
GGAAATTACGTCGTCGTCGA+GGG | 0.493703 | 1.4:+14253759 | None:intergenic |
TCATATCTGATGCAGGTCTT+GGG | 0.493778 | 1.4:-14248360 | MS.gene32322:CDS |
TTATGCCGGAACATTGATCT+GGG | 0.497144 | 1.4:+14254876 | None:intergenic |
ACTAGCATTGCAAAATATAG+AGG | 0.498715 | 1.4:+14254935 | None:intergenic |
TTCCTTGCAGCCGACGCCTA+GGG | 0.506704 | 1.4:-14253488 | MS.gene32322:CDS |
TCCATTGCTGTTGGATTGAG+AGG | 0.507982 | 1.4:-14247444 | MS.gene32322:CDS |
CGGCCCATCGTGGCTGTAGA+GGG | 0.511263 | 1.4:+14253738 | None:intergenic |
AATGAAATGGAGATAGTTGG+CGG | 0.511544 | 1.4:-14253454 | MS.gene32322:CDS |
TCCTCTCAATCCAACAGCAA+TGG | 0.513637 | 1.4:+14247443 | None:intergenic |
TAGTTCCATTTGTATTTGCA+AGG | 0.519175 | 1.4:-14247174 | MS.gene32322:CDS |
ATCAAGATCATATCTGATGC+AGG | 0.520048 | 1.4:-14248367 | MS.gene32322:CDS |
GCGGCCCATCGTGGCTGTAG+AGG | 0.522169 | 1.4:+14253737 | None:intergenic |
CATATGCCTTTGTAATGCTA+AGG | 0.524574 | 1.4:-14249460 | MS.gene32322:CDS |
CGAGAAATGGCGGCAAGAAG+GGG | 0.541416 | 1.4:-14253353 | MS.gene32322:CDS |
TGGTACCAAAAGAGCAGCCA+TGG | 0.542418 | 1.4:-14247514 | MS.gene32322:CDS |
GTGACAAGTCCACAGCTGTC+CGG | 0.547058 | 1.4:-14253532 | MS.gene32322:CDS |
GCCTCAAAGTCTCAGTGGCA+GGG | 0.554138 | 1.4:-14249529 | MS.gene32322:CDS |
ATTGCGTACTGCAATTGTAC+AGG | 0.554403 | 1.4:-14247415 | MS.gene32322:intron |
AAAACCCTACCTCCGGCCAC+CGG | 0.555614 | 1.4:+14253406 | None:intergenic |
GGGAAATTACGTCGTCGTCG+AGG | 0.560837 | 1.4:+14253758 | None:intergenic |
GTTTCTGATTGCATTGTGAG+CGG | 0.561036 | 1.4:+14253718 | None:intergenic |
CTCAGTGGCAGGGGAAGCTG+TGG | 0.563677 | 1.4:-14249519 | MS.gene32322:CDS |
CCTCAAAGTCTCAGTGGCAG+GGG | 0.565386 | 1.4:-14249528 | MS.gene32322:CDS |
AGTTCCATTTGTATTTGCAA+GGG | 0.566953 | 1.4:-14247173 | MS.gene32322:CDS |
CAAAAGAGCAGCCATGGGAA+TGG | 0.567669 | 1.4:-14247508 | MS.gene32322:CDS |
TCCATCCAAAACCCTACCTC+CGG | 0.572343 | 1.4:+14253399 | None:intergenic |
AAATTCGACGCCCTAGGCGT+CGG | 0.588580 | 1.4:+14253478 | None:intergenic |
CAGCCTCGTATCATTGCTTG+TGG | 0.591964 | 1.4:-14247534 | MS.gene32322:CDS |
ATCTGATGCAGGTCTTGGGA+TGG | 0.592991 | 1.4:-14248356 | MS.gene32322:CDS |
GAGAAATGGCGGCAAGAAGG+GGG | 0.593935 | 1.4:-14253352 | MS.gene32322:CDS |
TTTCCCTCTACAGCCACGAT+GGG | 0.594544 | 1.4:-14253741 | MS.gene32322:CDS |
CATACATAGCTTGAAGAAGA+GGG | 0.594874 | 1.4:+14254627 | None:intergenic |
AAATCTAATGGCCATTCCCA+TGG | 0.594974 | 1.4:+14247497 | None:intergenic |
ATAGATGATTTGATCAAACT+GGG | 0.601340 | 1.4:+14248388 | None:intergenic |
TCTCAATCCAACAGCAATGG+AGG | 0.601806 | 1.4:+14247446 | None:intergenic |
CCATACATAGCTTGAAGAAG+AGG | 0.603719 | 1.4:+14254626 | None:intergenic |
TCTCAGGCTGCTCTTCCACA+AGG | 0.606291 | 1.4:-14247199 | MS.gene32322:intron |
GATGGAAAAGATGTCGGCGT+TGG | 0.606504 | 1.4:+14253582 | None:intergenic |
CGTGTTGATGGAAAAGATGT+CGG | 0.609734 | 1.4:+14253576 | None:intergenic |
ATTTCCCTCTACAGCCACGA+TGG | 0.611788 | 1.4:-14253742 | MS.gene32322:CDS |
TGCGACGAATCGGTTTATGC+CGG | 0.611844 | 1.4:+14254862 | None:intergenic |
GAAGCATAACCGGACAGCTG+TGG | 0.616201 | 1.4:+14253523 | None:intergenic |
GAGGATAATGACATTACAAG+AGG | 0.617762 | 1.4:+14247465 | None:intergenic |
TATAAGCCTTAGCATTACAA+AGG | 0.624893 | 1.4:+14249454 | None:intergenic |
GCGGTGGTACGCCTGTTTGG+GGG | 0.642781 | 1.4:-14253435 | MS.gene32322:CDS |
GGGAATCACCCGAGAAATGG+CGG | 0.646034 | 1.4:-14253363 | MS.gene32322:CDS |
AGACAGCCTCAAAGTCTCAG+TGG | 0.648083 | 1.4:-14249534 | MS.gene32322:CDS |
ACAAATGGAACTATTCCTTG+TGG | 0.650251 | 1.4:+14247184 | None:intergenic |
GGGTGATTCTGGTGGTGCTG+AGG | 0.654806 | 1.4:+14253651 | None:intergenic |
GTGCTGAGGAGATGGAGCGT+CGG | 0.655420 | 1.4:+14253665 | None:intergenic |
GCATTGTGAGCGGCCCATCG+TGG | 0.656404 | 1.4:+14253728 | None:intergenic |
GGTACCAAAAGAGCAGCCAT+GGG | 0.666982 | 1.4:-14247513 | MS.gene32322:CDS |
GAAATGGAGATAGTTGGCGG+TGG | 0.673160 | 1.4:-14253451 | MS.gene32322:CDS |
ACATTATCGAGAAAATTCCC+CGG | 0.685281 | 1.4:+14253553 | None:intergenic |
ATACAACGTGATGTGTGCAA+TGG | 0.689281 | 1.4:-14254960 | MS.gene32322:CDS |
TATGCCGGAACATTGATCTG+GGG | 0.696507 | 1.4:+14254877 | None:intergenic |
GTACCACAAGCAATGATACG+AGG | 0.729485 | 1.4:+14247531 | None:intergenic |
AATGATGAGGGTGATTCTGG+TGG | 0.732883 | 1.4:+14253643 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 14246676 | 14255002 | 14246676 | ID=MS.gene32322 |
chr1.4 | mRNA | 14246676 | 14255002 | 14246676 | ID=MS.gene32322.t1;Parent=MS.gene32322 |
chr1.4 | exon | 14254572 | 14255002 | 14254572 | ID=MS.gene32322.t1.exon1;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14254572 | 14255002 | 14254572 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14253323 | 14253879 | 14253323 | ID=MS.gene32322.t1.exon2;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14253323 | 14253879 | 14253323 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14249368 | 14249575 | 14249368 | ID=MS.gene32322.t1.exon3;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14249368 | 14249575 | 14249368 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14248341 | 14248426 | 14248341 | ID=MS.gene32322.t1.exon4;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14248341 | 14248426 | 14248341 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14247416 | 14247573 | 14247416 | ID=MS.gene32322.t1.exon5;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14247416 | 14247573 | 14247416 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14247139 | 14247215 | 14247139 | ID=MS.gene32322.t1.exon6;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14247139 | 14247215 | 14247139 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
chr1.4 | exon | 14246676 | 14246712 | 14246676 | ID=MS.gene32322.t1.exon7;Parent=MS.gene32322.t1 |
chr1.4 | CDS | 14246676 | 14246712 | 14246676 | ID=cds.MS.gene32322.t1;Parent=MS.gene32322.t1 |
Gene Sequence |
Protein sequence |