Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012347.t1 | XP_003610057.2 | 97.5 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.00E+00 | 1586.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012347.t1 | Q92609 | 26.8 | 444 | 204 | 9 | 23 | 447 | 71 | 412 | 1.2e-32 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012347.t1 | G7JUA9 | 97.5 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0e+00 | 1586.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55117 | MS.gene012347 | PPI |
| MS.gene073312 | MS.gene012347 | PPI |
| MS.gene037046 | MS.gene012347 | PPI |
| MS.gene07739 | MS.gene012347 | PPI |
| MS.gene96351 | MS.gene012347 | PPI |
| MS.gene073313 | MS.gene012347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012347.t1 | MTR_4g127450 | 97.488 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1679 |
| MS.gene012347.t1 | MTR_4g127450 | 97.343 | 715 | 19 | 0 | 122 | 836 | 1 | 715 | 0.0 | 1437 |
| MS.gene012347.t1 | MTR_4g127450 | 97.313 | 670 | 18 | 0 | 167 | 836 | 1 | 670 | 0.0 | 1336 |
| MS.gene012347.t1 | MTR_2g037930 | 64.318 | 880 | 259 | 11 | 1 | 836 | 1 | 869 | 0.0 | 1053 |
| MS.gene012347.t1 | MTR_8g085300 | 27.381 | 168 | 93 | 5 | 38 | 181 | 123 | 285 | 3.55e-11 | 66.6 |
| MS.gene012347.t1 | MTR_3g083840 | 26.601 | 203 | 111 | 7 | 38 | 209 | 112 | 307 | 3.56e-11 | 66.6 |
| MS.gene012347.t1 | MTR_4g114580 | 28.070 | 171 | 88 | 6 | 38 | 181 | 140 | 302 | 5.92e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012347.t1 | AT4G29950 | 53.801 | 855 | 305 | 24 | 32 | 836 | 14 | 828 | 0.0 | 788 |
| MS.gene012347.t1 | AT4G29950 | 53.129 | 815 | 294 | 23 | 72 | 836 | 44 | 820 | 0.0 | 758 |
| MS.gene012347.t1 | AT2G19240 | 48.851 | 870 | 330 | 28 | 31 | 836 | 22 | 840 | 0.0 | 686 |
| MS.gene012347.t1 | AT2G19240 | 49.425 | 870 | 330 | 27 | 31 | 836 | 22 | 845 | 0.0 | 686 |
| MS.gene012347.t1 | AT4G29950 | 51.147 | 741 | 274 | 23 | 146 | 836 | 1 | 703 | 0.0 | 639 |
| MS.gene012347.t1 | AT5G57210 | 54.476 | 659 | 268 | 13 | 30 | 671 | 25 | 668 | 0.0 | 617 |
| MS.gene012347.t1 | AT5G57210 | 51.197 | 543 | 234 | 12 | 146 | 671 | 1 | 529 | 4.52e-153 | 461 |
Find 173 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTATTCTCCTGTTGC+TGG | 0.195760 | 8.4:+7057208 | MS.gene012347:CDS |
| TGGAAATAGTTGCCATGTTC+TGG | 0.229971 | 8.4:-7056133 | None:intergenic |
| ATGGGAACTTTAAAGAATAT+TGG | 0.231802 | 8.4:+7058633 | MS.gene012347:CDS |
| TTTATCAGATAATAGTAAAA+TGG | 0.259709 | 8.4:+7057429 | MS.gene012347:CDS |
| TTCCAATGGCTTTGGAAGTT+TGG | 0.270410 | 8.4:+7058447 | MS.gene012347:CDS |
| GAAATTCGGCCACACTTTCT+AGG | 0.287597 | 8.4:+7058406 | MS.gene012347:CDS |
| AACAATCAAGAGTGGTAAAA+AGG | 0.290842 | 8.4:+7057963 | MS.gene012347:CDS |
| CCTGTTGCTGGGTCCCATAC+TGG | 0.298750 | 8.4:+7057220 | MS.gene012347:CDS |
| TCTTCCCAGTAGCTATTATC+AGG | 0.301549 | 8.4:-7057805 | None:intergenic |
| TGGAAGTTTGGTCGTAATAA+TGG | 0.314220 | 8.4:+7058459 | MS.gene012347:CDS |
| CGTTTATTCGATGATCTTAG+AGG | 0.318032 | 8.4:+7054358 | MS.gene012347:CDS |
| ACCACCATTGCATGTGAATC+AGG | 0.320017 | 8.4:+7057754 | MS.gene012347:CDS |
| TTAAAGTTCCCATCACATTC+TGG | 0.329403 | 8.4:-7058623 | None:intergenic |
| TGAATAAATTCCAATGGCTT+TGG | 0.340110 | 8.4:+7058439 | MS.gene012347:CDS |
| AACACAATGGTCTGTATCTT+AGG | 0.344300 | 8.4:-7057052 | None:intergenic |
| TTCCCTGACCACACTCTTGT+TGG | 0.349187 | 8.4:-7058828 | None:intergenic |
| TGGGAACTTTAAAGAATATT+GGG | 0.350164 | 8.4:+7058634 | MS.gene012347:CDS |
| TCATGATATTTGAACTCATT+AGG | 0.352589 | 8.4:-7058228 | None:intergenic |
| GCAGCAGAAGCTTCAATTAC+AGG | 0.367492 | 8.4:-7057250 | None:intergenic |
| GTGTTGCTAAGTGATGCTTA+TGG | 0.369479 | 8.4:+7057070 | MS.gene012347:CDS |
| ACTTTGATCGTTATACTTGT+TGG | 0.372163 | 8.4:-7058532 | None:intergenic |
| TGTTGCTAAGTGATGCTTAT+GGG | 0.373836 | 8.4:+7057071 | MS.gene012347:CDS |
| TTGACAACCTCTTGATCGTC+TGG | 0.376659 | 8.4:+7057395 | MS.gene012347:CDS |
| GTCCATGCTTGAGCATATTC+AGG | 0.378528 | 8.4:+7058659 | MS.gene012347:CDS |
| TTATCAGGTAATAAACTCTT+AGG | 0.382184 | 8.4:-7057790 | None:intergenic |
| TAATGATTCCACAGGAAATT+CGG | 0.392355 | 8.4:+7058392 | MS.gene012347:CDS |
| GTTTAAGTTCTTCAGCACTA+TGG | 0.400618 | 8.4:-7057843 | None:intergenic |
| TTACAGGTGGCAAACCAGTA+TGG | 0.402275 | 8.4:-7057234 | None:intergenic |
| TGCAGTGGCGTATAAATCTC+GGG | 0.402658 | 8.4:+7054383 | MS.gene012347:CDS |
| AATCTCCGGCACCATTTCTC+AGG | 0.406744 | 8.4:+7054318 | MS.gene012347:CDS |
| GGCAACTATTTCCAGACAAA+AGG | 0.406937 | 8.4:+7056142 | MS.gene012347:CDS |
| TTCTTCTGACCCAAGTTCCT+TGG | 0.407632 | 8.4:-7058028 | None:intergenic |
| CGGGTTGTCCATGACAAGAT+TGG | 0.408976 | 8.4:-7055222 | None:intergenic |
| GCTGGAGAGGATGGTGGATC+AGG | 0.417731 | 8.4:+7056093 | MS.gene012347:CDS |
| CGGCACCATTTCTCAGGAAC+CGG | 0.419436 | 8.4:+7054324 | MS.gene012347:CDS |
| CTTTATATGCAGATAGTACA+TGG | 0.422407 | 8.4:+7056047 | MS.gene012347:intron |
| TATAGCCATCTCGTTGATCT+CGG | 0.425792 | 8.4:+7057310 | MS.gene012347:CDS |
| CTCTTGATTGTTGACGAAGA+TGG | 0.426953 | 8.4:-7057952 | None:intergenic |
| AGCAACCTATCTCCGGTGGC+AGG | 0.427699 | 8.4:+7058363 | MS.gene012347:CDS |
| CTGGGAAGCTTAATAATCTC+TGG | 0.432714 | 8.4:-7057594 | None:intergenic |
| ATAGCCATCTCGTTGATCTC+GGG | 0.436878 | 8.4:+7057311 | MS.gene012347:CDS |
| TCTCTTATTCTCCTGTTGCT+GGG | 0.437137 | 8.4:+7057209 | MS.gene012347:CDS |
| TTATGGGGTTGAAGGTGAAC+TGG | 0.438731 | 8.4:+7057087 | MS.gene012347:CDS |
| GAAGATCTATCCAAGGAACT+TGG | 0.440583 | 8.4:+7058018 | MS.gene012347:CDS |
| CGGCACCGGTTCCTGAGAAA+TGG | 0.440993 | 8.4:-7054329 | None:intergenic |
| AATCATGCCACCGGCTCTGT+TGG | 0.445482 | 8.4:+7054258 | None:intergenic |
| GGAAATAGTTGCCATGTTCT+GGG | 0.450619 | 8.4:-7056132 | None:intergenic |
| CCAGTATGGGACCCAGCAAC+AGG | 0.457235 | 8.4:-7057220 | None:intergenic |
| TATTACCTGATAATAGCTAC+TGG | 0.465123 | 8.4:+7057800 | MS.gene012347:CDS |
| CTCTCAGGATGATCAGAGAT+TGG | 0.467104 | 8.4:-7058342 | None:intergenic |
| TGTTTGAAGCTTTAATGAAT+GGG | 0.467577 | 8.4:+7057155 | MS.gene012347:CDS |
| TGCGCCCTGCCACCGGAGAT+AGG | 0.468340 | 8.4:-7058368 | None:intergenic |
| GAAATCGGTTCTCACGGAAA+AGG | 0.478306 | 8.4:+7056998 | MS.gene012347:CDS |
| GTCTCACAGGAAAGTAGTGT+TGG | 0.483922 | 8.4:+7058255 | MS.gene012347:CDS |
| CAAGGCGCTCCACATCAACT+TGG | 0.486995 | 8.4:-7056856 | None:intergenic |
| GTGTGGTCAGGGAACTTCAT+TGG | 0.489228 | 8.4:+7058837 | MS.gene012347:CDS |
| TCGGTTTCGTCTTTAATCTC+CGG | 0.491898 | 8.4:+7054304 | MS.gene012347:CDS |
| TACTGCCATGTCAGCTCTCA+AGG | 0.492107 | 8.4:+7058903 | MS.gene012347:CDS |
| GACTTGACGGATGACGAAAT+CGG | 0.492393 | 8.4:+7056983 | MS.gene012347:CDS |
| GGGTTGTCCATGACAAGATT+GGG | 0.497183 | 8.4:-7055221 | None:intergenic |
| TTTCCAACAAGAGTGTGGTC+AGG | 0.497315 | 8.4:+7058825 | MS.gene012347:CDS |
| TAGTTTGAGAGGGCGGCTCC+TGG | 0.499264 | 8.4:+7055163 | MS.gene012347:CDS |
| AGTGATGCTTATGGGGTTGA+AGG | 0.500001 | 8.4:+7057079 | MS.gene012347:CDS |
| ATGTTTGAAGCTTTAATGAA+TGG | 0.501384 | 8.4:+7057154 | MS.gene012347:CDS |
| TTGCAGTGGCGTATAAATCT+CGG | 0.502978 | 8.4:+7054382 | MS.gene012347:CDS |
| AAATTTCATTAATTTCATCA+AGG | 0.506660 | 8.4:-7058290 | None:intergenic |
| ACCGGAGATAGGTTGCTCTC+AGG | 0.509000 | 8.4:-7058357 | None:intergenic |
| TCATTATTGCGCCCTGCCAC+CGG | 0.512914 | 8.4:-7058375 | None:intergenic |
| CTACAGAATGATTATCCTGC+TGG | 0.514134 | 8.4:-7058086 | None:intergenic |
| CATTTCTCAGGAACCGGTGC+CGG | 0.515085 | 8.4:+7054330 | MS.gene012347:CDS |
| GACCAAACTTCCAAAGCCAT+TGG | 0.515271 | 8.4:-7058449 | None:intergenic |
| TTACCTTCTTCGAGAATTAG+CGG | 0.517058 | 8.4:-7054458 | None:intergenic |
| CGTCTCACATCTCAGACAAA+AGG | 0.517629 | 8.4:-7058945 | None:intergenic |
| GCTTAATAATCTCTGGAGAC+AGG | 0.520951 | 8.4:-7057587 | None:intergenic |
| GCTGAAGAACTTAAACAAGA+TGG | 0.522754 | 8.4:+7057850 | MS.gene012347:CDS |
| TCCTGAGAGCAACCTATCTC+CGG | 0.524052 | 8.4:+7058356 | MS.gene012347:CDS |
| CAATGCAGAGCTGGAGAGGA+TGG | 0.530243 | 8.4:+7056084 | MS.gene012347:CDS |
| AAGATCACCAGCTGTAGAAG+AGG | 0.531139 | 8.4:-7058565 | None:intergenic |
| TCTGACATAAGCAACAATTA+CGG | 0.532883 | 8.4:+7058138 | MS.gene012347:CDS |
| TTCACAATGCAGAGCTGGAG+AGG | 0.533828 | 8.4:+7056080 | MS.gene012347:CDS |
| GCAACTATTTCCAGACAAAA+GGG | 0.537102 | 8.4:+7056143 | MS.gene012347:CDS |
| GTCAGGTATGCTAGTTTGAG+AGG | 0.540089 | 8.4:+7055152 | MS.gene012347:intron |
| ATAGCTACTGGGAAGAAAAG+TGG | 0.540693 | 8.4:+7057812 | MS.gene012347:CDS |
| TTATGTTCTCCAAGTTGATG+TGG | 0.541208 | 8.4:+7056847 | MS.gene012347:CDS |
| GTATCATTTATTGTCGCATG+TGG | 0.542626 | 8.4:+7057276 | MS.gene012347:CDS |
| AAGCTCCTTGAGAGCTGACA+TGG | 0.543178 | 8.4:-7058908 | None:intergenic |
| TTGTTATATTCTACAAGCGC+AGG | 0.545602 | 8.4:-7057700 | None:intergenic |
| AATAAACGATTCTCCGGCAC+CGG | 0.546739 | 8.4:-7054343 | None:intergenic |
| TCATGAAACATTATGCCAGC+AGG | 0.547111 | 8.4:+7058071 | MS.gene012347:CDS |
| ACCTTGTCTATAACCACACT+CGG | 0.548812 | 8.4:-7056215 | None:intergenic |
| AATTTCATTAATTTCATCAA+GGG | 0.549080 | 8.4:-7058289 | None:intergenic |
| TCATCGAATAAACGATTCTC+CGG | 0.551047 | 8.4:-7054349 | None:intergenic |
| TACAGGTGGCAAACCAGTAT+GGG | 0.551405 | 8.4:-7057233 | None:intergenic |
| TTCCAACAAGAGTGTGGTCA+GGG | 0.551719 | 8.4:+7058826 | MS.gene012347:CDS |
| GAAGAAGATATAGAAAATCT+CGG | 0.552372 | 8.4:+7058045 | MS.gene012347:CDS |
| GAAGTTGAAGATGAAGAAGA+TGG | 0.552384 | 8.4:-7054412 | None:intergenic |
| GGATGATCAGAGATTGGAAG+AGG | 0.553620 | 8.4:-7058336 | None:intergenic |
| ATATCATGAAAATGTCTCAC+AGG | 0.553655 | 8.4:+7058242 | MS.gene012347:CDS |
| ACAGCTTCCTCTTCTACAGC+TGG | 0.554308 | 8.4:+7058558 | MS.gene012347:CDS |
| GCTTTAATGAATGGGGCTCA+CGG | 0.557113 | 8.4:+7057163 | MS.gene012347:CDS |
| GAGGCAGAGCAACAAGATGA+TGG | 0.560054 | 8.4:+7058114 | MS.gene012347:CDS |
| GATTGGAAGAGGTGAATCGA+TGG | 0.561413 | 8.4:-7058325 | None:intergenic |
| TCTCACAGGAAAGTAGTGTT+GGG | 0.563238 | 8.4:+7058256 | MS.gene012347:CDS |
| ACTTTCATCCTTTGTAACGT+GGG | 0.565238 | 8.4:-7055192 | None:intergenic |
| AAATCCGTCTCAATATGCCT+TGG | 0.567226 | 8.4:-7056168 | None:intergenic |
| GGGCGCAATAATGATTCCAC+AGG | 0.567344 | 8.4:+7058384 | MS.gene012347:CDS |
| TTCTACAAGCGCAGGTGTCG+AGG | 0.567649 | 8.4:-7057692 | None:intergenic |
| CACAGTACTTTGCTCTACGC+TGG | 0.568902 | 8.4:+7057341 | MS.gene012347:CDS |
| GTTTGAAGCTTTAATGAATG+GGG | 0.569176 | 8.4:+7057156 | MS.gene012347:CDS |
| ACTCATTAGGAGAACTAGCT+AGG | 0.569589 | 8.4:-7058215 | None:intergenic |
| GGCTCACGGTTCAGTTGCAA+TGG | 0.571038 | 8.4:+7057177 | MS.gene012347:CDS |
| TAATCATTCTGTAGCAGTTG+AGG | 0.571250 | 8.4:+7058095 | MS.gene012347:CDS |
| TTCCAGACAAAAGGGTGCCA+AGG | 0.572383 | 8.4:+7056151 | MS.gene012347:CDS |
| TATGGGGTTGAAGGTGAACT+GGG | 0.574976 | 8.4:+7057088 | MS.gene012347:CDS |
| AAGATCTATCCAAGGAACTT+GGG | 0.576219 | 8.4:+7058019 | MS.gene012347:CDS |
| CCCGAGTGTGGTTATAGACA+AGG | 0.580071 | 8.4:+7056214 | MS.gene012347:CDS |
| CGGTTCCTGAGAAATGGTGC+CGG | 0.583182 | 8.4:-7054323 | None:intergenic |
| AGGATCTTTCATTCATCTCG+CGG | 0.583363 | 8.4:+7057487 | MS.gene012347:CDS |
| TTGTAACGTGGGGATCAACC+AGG | 0.583633 | 8.4:-7055181 | None:intergenic |
| GTTGCTAAGTGATGCTTATG+GGG | 0.585951 | 8.4:+7057072 | MS.gene012347:CDS |
| TACTTTCATCCTTTGTAACG+TGG | 0.587230 | 8.4:-7055193 | None:intergenic |
| TAGCCATCTCGTTGATCTCG+GGG | 0.587269 | 8.4:+7057312 | MS.gene012347:CDS |
| GCAACCTATCTCCGGTGGCA+GGG | 0.587568 | 8.4:+7058364 | MS.gene012347:CDS |
| CCACCGCTAATTCTCGAAGA+AGG | 0.589225 | 8.4:+7054455 | MS.gene012347:CDS |
| TTGCCGGAAAATCATGCCAC+CGG | 0.589609 | 8.4:+7054249 | None:intergenic |
| GGCGGATCCAACAGAGCCGG+TGG | 0.589682 | 8.4:-7054265 | None:intergenic |
| GGTTGATCCCCACGTTACAA+AGG | 0.589815 | 8.4:+7055184 | MS.gene012347:CDS |
| TTTATATGCAGATAGTACAT+GGG | 0.590854 | 8.4:+7056048 | MS.gene012347:intron |
| TGACAACCTCTTGATCGTCT+GGG | 0.594198 | 8.4:+7057396 | MS.gene012347:CDS |
| TAAAACTGAATAAATTCCAA+TGG | 0.598877 | 8.4:+7058433 | MS.gene012347:CDS |
| ATTACCTGATAATAGCTACT+GGG | 0.602058 | 8.4:+7057801 | MS.gene012347:CDS |
| TTCTGCTGACCAGAATGTGA+TGG | 0.603860 | 8.4:+7058614 | MS.gene012347:CDS |
| ACTTAATGCAAGAGTCTGCA+AGG | 0.606324 | 8.4:-7057656 | None:intergenic |
| TTTCATCCCAGACGATCAAG+AGG | 0.607164 | 8.4:-7057402 | None:intergenic |
| AATGGCGGATCCAACAGAGC+CGG | 0.608631 | 8.4:-7054268 | None:intergenic |
| CTTTCATCCTTTGTAACGTG+GGG | 0.608769 | 8.4:-7055191 | None:intergenic |
| TAGTTCACCCAATCTTGTCA+TGG | 0.608857 | 8.4:+7055214 | MS.gene012347:CDS |
| ATTGGAAGAGGTGAATCGAT+GGG | 0.609774 | 8.4:-7058324 | None:intergenic |
| GAAAAGAGTACTTGCTTCTG+AGG | 0.610033 | 8.4:+7058497 | MS.gene012347:CDS |
| TGCAGAGCTGGAGAGGATGG+TGG | 0.616704 | 8.4:+7056087 | MS.gene012347:CDS |
| TTTGTTAGAAGATCTATCCA+AGG | 0.617410 | 8.4:+7058011 | MS.gene012347:CDS |
| TCACGTTTATACCCAGAACA+TGG | 0.622550 | 8.4:+7056121 | MS.gene012347:CDS |
| ATGATCTTAGAGGTTTGCAG+TGG | 0.624245 | 8.4:+7054368 | MS.gene012347:CDS |
| TCAGGTATGCTAGTTTGAGA+GGG | 0.624547 | 8.4:+7055153 | MS.gene012347:intron |
| ACTTGGAGAACATAAAGCAA+AGG | 0.628302 | 8.4:-7056839 | None:intergenic |
| TACCTGAATATGCTCAAGCA+TGG | 0.637984 | 8.4:-7058661 | None:intergenic |
| CAACCCCGAGATCAACGAGA+TGG | 0.640135 | 8.4:-7057315 | None:intergenic |
| GGTATGCTAGTTTGAGAGGG+CGG | 0.644507 | 8.4:+7055156 | MS.gene012347:intron |
| TCTGCTGACCAGAATGTGAT+GGG | 0.647152 | 8.4:+7058615 | MS.gene012347:CDS |
| GATGACGAAATCGGTTCTCA+CGG | 0.647201 | 8.4:+7056992 | MS.gene012347:CDS |
| TGAACCTGATTCACATGCAA+TGG | 0.648752 | 8.4:-7057758 | None:intergenic |
| AATCTCTGGAGACAGGTCGT+AGG | 0.651148 | 8.4:-7057580 | None:intergenic |
| TAAAATGGAAAAGCATGCAG+AGG | 0.651374 | 8.4:+7057444 | MS.gene012347:CDS |
| GGTGCCAAGGCATATTGAGA+CGG | 0.652499 | 8.4:+7056164 | MS.gene012347:CDS |
| GCAGTGGCGTATAAATCTCG+GGG | 0.654536 | 8.4:+7054384 | MS.gene012347:CDS |
| ATTTATCTCAGCTATTGCTG+TGG | 0.655369 | 8.4:+7057513 | MS.gene012347:CDS |
| CTTGTAGAATATAACAACAA+GGG | 0.657239 | 8.4:+7057706 | MS.gene012347:CDS |
| CCTTGTCTATAACCACACTC+GGG | 0.658075 | 8.4:-7056214 | None:intergenic |
| GCTTGTAGAATATAACAACA+AGG | 0.658953 | 8.4:+7057705 | MS.gene012347:CDS |
| ACCTGATTCACATGCAATGG+TGG | 0.659619 | 8.4:-7057755 | None:intergenic |
| TCTGCTTTCCAACAAGAGTG+TGG | 0.661245 | 8.4:+7058820 | MS.gene012347:CDS |
| AGATGTCTTAGCAGAAACAC+CGG | 0.661553 | 8.4:+7058171 | MS.gene012347:CDS |
| GGCACGACGAAGATCATCAA+CGG | 0.661655 | 8.4:-7054434 | None:intergenic |
| AAGTGTGGCCGAATTTCCTG+TGG | 0.661701 | 8.4:-7058400 | None:intergenic |
| TGAGAGCAACCTATCTCCGG+TGG | 0.662239 | 8.4:+7058359 | MS.gene012347:CDS |
| TCTTCGTCAACAATCAAGAG+TGG | 0.663979 | 8.4:+7057955 | MS.gene012347:CDS |
| TGTCTTAGACATCCCGAGTG+TGG | 0.664217 | 8.4:+7056202 | MS.gene012347:CDS |
| TTATATGCAGATAGTACATG+GGG | 0.672097 | 8.4:+7056049 | MS.gene012347:intron |
| GCAGAAGCTTCAATTACAGG+TGG | 0.678657 | 8.4:-7057247 | None:intergenic |
| AGCATCACTTAGCAACACAA+TGG | 0.690065 | 8.4:-7057065 | None:intergenic |
| CCTTCTTCGAGAATTAGCGG+TGG | 0.702456 | 8.4:-7054455 | None:intergenic |
| TAGCAGAAACACCGGCAGCG+AGG | 0.719930 | 8.4:+7058179 | MS.gene012347:CDS |
| CAGCGTAGAGCAAAGTACTG+TGG | 0.720652 | 8.4:-7057340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCATTAATTTCATCA+AGG | - | chr8.4:7058293-7058312 | None:intergenic | 15.0% |
| !! | AATTTCATTAATTTCATCAA+GGG | - | chr8.4:7058292-7058311 | None:intergenic | 15.0% |
| !! | ACATAGTTTGATATAAATTA+TGG | - | chr8.4:7055505-7055524 | None:intergenic | 15.0% |
| !! | ACTAAAATTTAAAAACAAGT+TGG | + | chr8.4:7058702-7058721 | MS.gene012347:intron | 15.0% |
| !! | GTAGAAATAAATATATAATC+TGG | - | chr8.4:7055472-7055491 | None:intergenic | 15.0% |
| !! | TTTAGTTAACTAGTAAAAAA+CGG | + | chr8.4:7056441-7056460 | MS.gene012347:intron | 15.0% |
| !! | TTTATCAGATAATAGTAAAA+TGG | + | chr8.4:7057429-7057448 | MS.gene012347:CDS | 15.0% |
| !!! | ATCAATATCATTTTATATCA+AGG | + | chr8.4:7054880-7054899 | MS.gene012347:intron | 15.0% |
| !!! | CTTCTTTTTATTTATTTTGT+AGG | + | chr8.4:7056797-7056816 | MS.gene012347:intron | 15.0% |
| !!! | TGTTTTTGTTTTTTTATGAT+TGG | + | chr8.4:7054720-7054739 | MS.gene012347:intron | 15.0% |
| !!! | TTTTATTCATACAGATAATA+TGG | - | chr8.4:7056595-7056614 | None:intergenic | 15.0% |
| !!! | TTTTGTCATATAATCTTTAA+TGG | + | chr8.4:7056534-7056553 | MS.gene012347:intron | 15.0% |
| !! | AAAATGAAAACTGAAAACAT+TGG | - | chr8.4:7055675-7055694 | None:intergenic | 20.0% |
| !! | AAAATTTGCAATGATTTACT+TGG | - | chr8.4:7055260-7055279 | None:intergenic | 20.0% |
| !! | AATAGAAGATAAGAAACTAA+GGG | + | chr8.4:7055639-7055658 | MS.gene012347:intron | 20.0% |
| !! | AATTTACATCCTTCTATAAT+TGG | - | chr8.4:7054529-7054548 | None:intergenic | 20.0% |
| !! | ATCCAAAAATAAAATGCAAT+TGG | - | chr8.4:7055091-7055110 | None:intergenic | 20.0% |
| !! | ATTATCCAAATACCATAAAT+TGG | - | chr8.4:7054580-7054599 | None:intergenic | 20.0% |
| !! | CATAACATAAACAAGTTATA+CGG | - | chr8.4:7056738-7056757 | None:intergenic | 20.0% |
| !! | GAAAATAAATAGATGGATAA+TGG | - | chr8.4:7055447-7055466 | None:intergenic | 20.0% |
| !! | TAAAACTGAATAAATTCCAA+TGG | + | chr8.4:7058433-7058452 | MS.gene012347:CDS | 20.0% |
| !! | TAATAGAAGATAAGAAACTA+AGG | + | chr8.4:7055638-7055657 | MS.gene012347:intron | 20.0% |
| !! | TTAAAACATGTGAGAAAAAA+TGG | - | chr8.4:7054556-7054575 | None:intergenic | 20.0% |
| !! | TTAATCCAATTTATGGTATT+TGG | + | chr8.4:7054572-7054591 | MS.gene012347:intron | 20.0% |
| !! | TTGATATAAATTATGGAAGT+TGG | - | chr8.4:7055498-7055517 | None:intergenic | 20.0% |
| !! | TTTATATCAAACTATGTTTC+CGG | + | chr8.4:7055508-7055527 | MS.gene012347:intron | 20.0% |
| !!! | ACATGTTTTAATCCAATTTA+TGG | + | chr8.4:7054565-7054584 | MS.gene012347:intron | 20.0% |
| !!! | ACATTAAATGATTAACTTGT+TGG | + | chr8.4:7056661-7056680 | MS.gene012347:intron | 20.0% |
| !!! | AGAAATTTGTTTTTCCATTT+GGG | + | chr8.4:7054931-7054950 | MS.gene012347:intron | 20.0% |
| !!! | ATCCAATTGCATTTTATTTT+TGG | + | chr8.4:7055086-7055105 | MS.gene012347:intron | 20.0% |
| !!! | TAGAAATTTGTTTTTCCATT+TGG | + | chr8.4:7054930-7054949 | MS.gene012347:intron | 20.0% |
| ! | AAAAAGAAGCTCATTAATGT+TGG | - | chr8.4:7056786-7056805 | None:intergenic | 25.0% |
| ! | AAGGTTAAGCTAAACAATAA+TGG | + | chr8.4:7055582-7055601 | MS.gene012347:intron | 25.0% |
| ! | ACTAAAGCTTTCATTCAATT+AGG | - | chr8.4:7056427-7056446 | None:intergenic | 25.0% |
| ! | ACTGAGTAAATAGGAATTTA+TGG | - | chr8.4:7055339-7055358 | None:intergenic | 25.0% |
| ! | ATAAATCTATTTCCAGCATT+TGG | + | chr8.4:7055302-7055321 | MS.gene012347:intron | 25.0% |
| ! | ATAGAAGATAAGAAACTAAG+GGG | + | chr8.4:7055640-7055659 | MS.gene012347:intron | 25.0% |
| ! | ATCAAAACAAAGACACTATA+AGG | - | chr8.4:7054506-7054525 | None:intergenic | 25.0% |
| ! | ATTTATCCAGATGACATAAT+GGG | - | chr8.4:7055288-7055307 | None:intergenic | 25.0% |
| ! | CTTGTAGAATATAACAACAA+GGG | + | chr8.4:7057706-7057725 | MS.gene012347:CDS | 25.0% |
| ! | GAAGAAGATATAGAAAATCT+CGG | + | chr8.4:7058045-7058064 | MS.gene012347:CDS | 25.0% |
| ! | GATAATGAGTTAATAGAACT+TGG | + | chr8.4:7055038-7055057 | MS.gene012347:intron | 25.0% |
| ! | TAAAAAATCTTCAGACTTGA+CGG | + | chr8.4:7056970-7056989 | MS.gene012347:CDS | 25.0% |
| ! | TCATGATATTTGAACTCATT+AGG | - | chr8.4:7058231-7058250 | None:intergenic | 25.0% |
| ! | TTATATCAAACTATGTTTCC+GGG | + | chr8.4:7055509-7055528 | MS.gene012347:intron | 25.0% |
| ! | TTATCAGGTAATAAACTCTT+AGG | - | chr8.4:7057793-7057812 | None:intergenic | 25.0% |
| ! | TTCATAATTCATCAAGTATC+AGG | - | chr8.4:7056691-7056710 | None:intergenic | 25.0% |
| ! | TTTATATGCAGATAGTACAT+GGG | + | chr8.4:7056048-7056067 | MS.gene012347:intron | 25.0% |
| !! | AATAAACTCTTAGGAGTTTT+TGG | - | chr8.4:7057784-7057803 | None:intergenic | 25.0% |
| !! | AATAAATAGATGGATAATGG+AGG | - | chr8.4:7055444-7055463 | None:intergenic | 25.0% |
| !! | ATGGGAACTTTAAAGAATAT+TGG | + | chr8.4:7058633-7058652 | MS.gene012347:CDS | 25.0% |
| !! | ATGTTTGAAGCTTTAATGAA+TGG | + | chr8.4:7057154-7057173 | MS.gene012347:CDS | 25.0% |
| !! | GCATTTTCAGAAATTTTGAA+AGG | + | chr8.4:7055763-7055782 | MS.gene012347:intron | 25.0% |
| !! | TAGTACGTCTAAAAATGTTT+TGG | + | chr8.4:7058864-7058883 | MS.gene012347:CDS | 25.0% |
| !! | TGCAGTACTGTTAATTTTAA+TGG | + | chr8.4:7058588-7058607 | MS.gene012347:CDS | 25.0% |
| !! | TGGGAACTTTAAAGAATATT+GGG | + | chr8.4:7058634-7058653 | MS.gene012347:CDS | 25.0% |
| !! | TGTTTGAAGCTTTAATGAAT+GGG | + | chr8.4:7057155-7057174 | MS.gene012347:CDS | 25.0% |
| !! | TTTTAATGTTTGTGTTCTCT+GGG | - | chr8.4:7057615-7057634 | None:intergenic | 25.0% |
| !! | TTTTATATTCCTAGAAAGTG+TGG | - | chr8.4:7058418-7058437 | None:intergenic | 25.0% |
| !! | TTTTTAATGTTTGTGTTCTC+TGG | - | chr8.4:7057616-7057635 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTCCTTCTAACT+CGG | + | chr8.4:7056315-7056334 | MS.gene012347:intron | 25.0% |
| !!! | GCTAGATTTGTTTTCAAAAA+CGG | - | chr8.4:7055745-7055764 | None:intergenic | 25.0% |
| !!! | TGAGACGGATTTTATTATTA+TGG | + | chr8.4:7056179-7056198 | MS.gene012347:CDS | 25.0% |
| !!! | TGTTTTGATCCAATTATAGA+AGG | + | chr8.4:7054517-7054536 | MS.gene012347:intron | 25.0% |
| !!! | TTCGTTTTAAATTGCTAACA+AGG | - | chr8.4:7055886-7055905 | None:intergenic | 25.0% |
| AACAATCAAGAGTGGTAAAA+AGG | + | chr8.4:7057963-7057982 | MS.gene012347:CDS | 30.0% | |
| AATTATGAACTGCCTTTCTT+GGG | + | chr8.4:7056702-7056721 | MS.gene012347:intron | 30.0% | |
| ACTTTGATCGTTATACTTGT+TGG | - | chr8.4:7058535-7058554 | None:intergenic | 30.0% | |
| AGGAATTTATGGCAGTATAA+CGG | - | chr8.4:7055328-7055347 | None:intergenic | 30.0% | |
| ATTACCTGATAATAGCTACT+GGG | + | chr8.4:7057801-7057820 | MS.gene012347:CDS | 30.0% | |
| CAATTATGATAGAGAGAAGA+TGG | - | chr8.4:7055840-7055859 | None:intergenic | 30.0% | |
| CTTTATATGCAGATAGTACA+TGG | + | chr8.4:7056047-7056066 | MS.gene012347:intron | 30.0% | |
| GAAAAATAGATGGACAGAAA+AGG | + | chr8.4:7057897-7057916 | MS.gene012347:CDS | 30.0% | |
| GATTTATCCAGATGACATAA+TGG | - | chr8.4:7055289-7055308 | None:intergenic | 30.0% | |
| GCTTGTAGAATATAACAACA+AGG | + | chr8.4:7057705-7057724 | MS.gene012347:CDS | 30.0% | |
| GTTTCAGAGAAGTTATCTTA+AGG | + | chr8.4:7058768-7058787 | MS.gene012347:intron | 30.0% | |
| TAAACAAGTTATACGGAATC+TGG | - | chr8.4:7056731-7056750 | None:intergenic | 30.0% | |
| TAAATACGTTTGCTCACTTT+GGG | + | chr8.4:7056287-7056306 | MS.gene012347:intron | 30.0% | |
| TAACTCATTATCTCTCAAGA+TGG | - | chr8.4:7055030-7055049 | None:intergenic | 30.0% | |
| TAATGATTCCACAGGAAATT+CGG | + | chr8.4:7058392-7058411 | MS.gene012347:CDS | 30.0% | |
| TATTACCTGATAATAGCTAC+TGG | + | chr8.4:7057800-7057819 | MS.gene012347:CDS | 30.0% | |
| TCTGACATAAGCAACAATTA+CGG | + | chr8.4:7058138-7058157 | MS.gene012347:CDS | 30.0% | |
| TCTGGTCGAAAATAAATAGA+TGG | - | chr8.4:7055454-7055473 | None:intergenic | 30.0% | |
| TGAATAAATTCCAATGGCTT+TGG | + | chr8.4:7058439-7058458 | MS.gene012347:CDS | 30.0% | |
| TGTTTCGATCGTATAGATTT+GGG | + | chr8.4:7054968-7054987 | MS.gene012347:intron | 30.0% | |
| TTAAATTGCTAACAAGGAGA+TGG | - | chr8.4:7055880-7055899 | None:intergenic | 30.0% | |
| TTATATGCAGATAGTACATG+GGG | + | chr8.4:7056049-7056068 | MS.gene012347:intron | 30.0% | |
| TTCCATCTCAGAAAAATAGA+TGG | + | chr8.4:7057887-7057906 | MS.gene012347:CDS | 30.0% | |
| TTGCTCTATACTGAGTAAAT+AGG | - | chr8.4:7055348-7055367 | None:intergenic | 30.0% | |
| TTGTTTCGATCGTATAGATT+TGG | + | chr8.4:7054967-7054986 | MS.gene012347:intron | 30.0% | |
| TTTATCCAGATGACATAATG+GGG | - | chr8.4:7055287-7055306 | None:intergenic | 30.0% | |
| TTTGTTAGAAGATCTATCCA+AGG | + | chr8.4:7058011-7058030 | MS.gene012347:CDS | 30.0% | |
| ! | ATGTTTTCAGAAAGTAAACG+CGG | + | chr8.4:7055932-7055951 | MS.gene012347:intron | 30.0% |
| ! | CATTTTACAGACAGATTTGA+TGG | + | chr8.4:7056905-7056924 | MS.gene012347:CDS | 30.0% |
| ! | GTTTGAAGCTTTAATGAATG+GGG | + | chr8.4:7057156-7057175 | MS.gene012347:CDS | 30.0% |
| ! | TTAATGTTTCTAATCCTGTC+AGG | + | chr8.4:7055135-7055154 | MS.gene012347:intron | 30.0% |
| ! | TTACTTGGATTTTGTGAAAG+CGG | - | chr8.4:7055245-7055264 | None:intergenic | 30.0% |
| !! | AAAGTTCAGAGCTTTATTGA+TGG | + | chr8.4:7054621-7054640 | MS.gene012347:intron | 30.0% |
| !! | AAGTTCAGAGCTTTATTGAT+GGG | + | chr8.4:7054622-7054641 | MS.gene012347:intron | 30.0% |
| !! | ATTTGTTTTCAAAAACGGTG+AGG | - | chr8.4:7055740-7055759 | None:intergenic | 30.0% |
| !!! | AAAAATGTTTTGGTTGGCAA+AGG | + | chr8.4:7058874-7058893 | MS.gene012347:CDS | 30.0% |
| !!! | AAAATGTTTTGGTTGGCAAA+GGG | + | chr8.4:7058875-7058894 | MS.gene012347:CDS | 30.0% |
| !!! | ACGTCTAAAAATGTTTTGGT+TGG | + | chr8.4:7058868-7058887 | MS.gene012347:CDS | 30.0% |
| AAAACGGTGAGGAAAATACT+TGG | - | chr8.4:7055729-7055748 | None:intergenic | 35.0% | |
| AAAAGCGAACCAATTAAGCA+CGG | - | chr8.4:7056348-7056367 | None:intergenic | 35.0% | |
| AACAAAGACACTATAAGGCA+TGG | - | chr8.4:7054501-7054520 | None:intergenic | 35.0% | |
| AACAACACTCAAATCCCAAA+TGG | - | chr8.4:7054948-7054967 | None:intergenic | 35.0% | |
| AACACAATGGTCTGTATCTT+AGG | - | chr8.4:7057055-7057074 | None:intergenic | 35.0% | |
| AAGATCTATCCAAGGAACTT+GGG | + | chr8.4:7058019-7058038 | MS.gene012347:CDS | 35.0% | |
| AATGGCAATCAACAAATGCT+TGG | + | chr8.4:7055600-7055619 | MS.gene012347:intron | 35.0% | |
| ACCAATAATAGCAAGGAACT+TGG | - | chr8.4:7054667-7054686 | None:intergenic | 35.0% | |
| ACTTGGAGAACATAAAGCAA+AGG | - | chr8.4:7056842-7056861 | None:intergenic | 35.0% | |
| ACTTTCATCCTTTGTAACGT+GGG | - | chr8.4:7055195-7055214 | None:intergenic | 35.0% | |
| ATCGTATAGATTTGGGCATT+TGG | + | chr8.4:7054975-7054994 | MS.gene012347:intron | 35.0% | |
| ATTTATCTCAGCTATTGCTG+TGG | + | chr8.4:7057513-7057532 | MS.gene012347:CDS | 35.0% | |
| CAAAGTGAGCAAACGTATTT+AGG | - | chr8.4:7056288-7056307 | None:intergenic | 35.0% | |
| CCAATAATAGCAAGGAACTT+GGG | - | chr8.4:7054666-7054685 | None:intergenic | 35.0% | |
| CGTTTATTCGATGATCTTAG+AGG | + | chr8.4:7054358-7054377 | MS.gene012347:CDS | 35.0% | |
| CTAAATACGTTTGCTCACTT+TGG | + | chr8.4:7056286-7056305 | MS.gene012347:intron | 35.0% | |
| GAAGTTGAAGATGAAGAAGA+TGG | - | chr8.4:7054415-7054434 | None:intergenic | 35.0% | |
| GAATTATGAACTGCCTTTCT+TGG | + | chr8.4:7056701-7056720 | MS.gene012347:intron | 35.0% | |
| GCAACTATTTCCAGACAAAA+GGG | + | chr8.4:7056143-7056162 | MS.gene012347:CDS | 35.0% | |
| GCTGAAGAACTTAAACAAGA+TGG | + | chr8.4:7057850-7057869 | MS.gene012347:CDS | 35.0% | |
| GCTTATCACCAATAATAGCA+AGG | - | chr8.4:7054674-7054693 | None:intergenic | 35.0% | |
| GTATCATTTATTGTCGCATG+TGG | + | chr8.4:7057276-7057295 | MS.gene012347:CDS | 35.0% | |
| TAATCATTCTGTAGCAGTTG+AGG | + | chr8.4:7058095-7058114 | MS.gene012347:CDS | 35.0% | |
| TACTTTCATCCTTTGTAACG+TGG | - | chr8.4:7055196-7055215 | None:intergenic | 35.0% | |
| TATTGTGTGTAACTGTTGCT+TGG | - | chr8.4:7056252-7056271 | None:intergenic | 35.0% | |
| TCATACAGATAATATGGCAG+TGG | - | chr8.4:7056589-7056608 | None:intergenic | 35.0% | |
| TCATCGAATAAACGATTCTC+CGG | - | chr8.4:7054352-7054371 | None:intergenic | 35.0% | |
| TGGAAGTTTGGTCGTAATAA+TGG | + | chr8.4:7058459-7058478 | MS.gene012347:CDS | 35.0% | |
| TGTTGCTAAGTGATGCTTAT+GGG | + | chr8.4:7057071-7057090 | MS.gene012347:CDS | 35.0% | |
| TTAAAGTTCCCATCACATTC+TGG | - | chr8.4:7058626-7058645 | None:intergenic | 35.0% | |
| TTACCTTCTTCGAGAATTAG+CGG | - | chr8.4:7054461-7054480 | None:intergenic | 35.0% | |
| TTGTTATATTCTACAAGCGC+AGG | - | chr8.4:7057703-7057722 | None:intergenic | 35.0% | |
| ! | AAAGTTTTCGAACTTCTGCA+AGG | - | chr8.4:7056877-7056896 | None:intergenic | 35.0% |
| ! | CATTTTATTGTCACCACAGA+TGG | - | chr8.4:7056025-7056044 | None:intergenic | 35.0% |
| ! | GTGCTAAGGCTAGTTATATA+GGG | - | chr8.4:7056395-7056414 | None:intergenic | 35.0% |
| ! | GTTTAAGTTCTTCAGCACTA+TGG | - | chr8.4:7057846-7057865 | None:intergenic | 35.0% |
| ! | TAAAATGGAAAAGCATGCAG+AGG | + | chr8.4:7057444-7057463 | MS.gene012347:CDS | 35.0% |
| ! | TACTTGGATTTTGTGAAAGC+GGG | - | chr8.4:7055244-7055263 | None:intergenic | 35.0% |
| ! | TCTTGCACTTTTCATGAGAT+AGG | + | chr8.4:7055401-7055420 | MS.gene012347:intron | 35.0% |
| ! | TGTGCTAAGGCTAGTTATAT+AGG | - | chr8.4:7056396-7056415 | None:intergenic | 35.0% |
| !! | ACAACACAGACACTTGTTTT+AGG | + | chr8.4:7057467-7057486 | MS.gene012347:CDS | 35.0% |
| !! | GTCCATCTATTTTTCTGAGA+TGG | - | chr8.4:7057892-7057911 | None:intergenic | 35.0% |
| !! | TTATGTTCTCCAAGTTGATG+TGG | + | chr8.4:7056847-7056866 | MS.gene012347:CDS | 35.0% |
| AAATCCGTCTCAATATGCCT+TGG | - | chr8.4:7056171-7056190 | None:intergenic | 40.0% | |
| ACCTTGTCTATAACCACACT+CGG | - | chr8.4:7056218-7056237 | None:intergenic | 40.0% | |
| ACTCATTAGGAGAACTAGCT+AGG | - | chr8.4:7058218-7058237 | None:intergenic | 40.0% | |
| ACTTAATGCAAGAGTCTGCA+AGG | - | chr8.4:7057659-7057678 | None:intergenic | 40.0% | |
| AGAAGGTAAGCCAATTCACT+TGG | + | chr8.4:7054472-7054491 | MS.gene012347:intron | 40.0% | |
| AGATGTCTTAGCAGAAACAC+CGG | + | chr8.4:7058171-7058190 | MS.gene012347:CDS | 40.0% | |
| AGCAAACGTATTTAGGAGGA+AGG | - | chr8.4:7056281-7056300 | None:intergenic | 40.0% | |
| AGCATCACTTAGCAACACAA+TGG | - | chr8.4:7057068-7057087 | None:intergenic | 40.0% | |
| AGGATCTTTCATTCATCTCG+CGG | + | chr8.4:7057487-7057506 | MS.gene012347:CDS | 40.0% | |
| AGTGAGCAAACGTATTTAGG+AGG | - | chr8.4:7056285-7056304 | None:intergenic | 40.0% | |
| ATAGCTACTGGGAAGAAAAG+TGG | + | chr8.4:7057812-7057831 | MS.gene012347:CDS | 40.0% | |
| ATGATCTTAGAGGTTTGCAG+TGG | + | chr8.4:7054368-7054387 | MS.gene012347:CDS | 40.0% | |
| ATTGGAAGAGGTGAATCGAT+GGG | - | chr8.4:7058327-7058346 | None:intergenic | 40.0% | |
| CCTTTCAATAAAGCAGATGC+AGG | - | chr8.4:7056626-7056645 | None:intergenic | 40.0% | |
| CTACAGAATGATTATCCTGC+TGG | - | chr8.4:7058089-7058108 | None:intergenic | 40.0% | |
| CTCTCAACAAGCACAATACA+TGG | + | chr8.4:7054766-7054785 | MS.gene012347:intron | 40.0% | |
| CTCTCTACACTATTGGAAAC+GGG | + | chr8.4:7056498-7056517 | MS.gene012347:intron | 40.0% | |
| CTCTTGATTGTTGACGAAGA+TGG | - | chr8.4:7057955-7057974 | None:intergenic | 40.0% | |
| CTGGGAAGCTTAATAATCTC+TGG | - | chr8.4:7057597-7057616 | None:intergenic | 40.0% | |
| CTTTCATCCTTTGTAACGTG+GGG | - | chr8.4:7055194-7055213 | None:intergenic | 40.0% | |
| GAAGATCTATCCAAGGAACT+TGG | + | chr8.4:7058018-7058037 | MS.gene012347:CDS | 40.0% | |
| GCCATTGTCAAAAACAGCAT+CGG | + | chr8.4:7054285-7054304 | MS.gene012347:CDS | 40.0% | |
| GCTCTCTACACTATTGGAAA+CGG | + | chr8.4:7056497-7056516 | MS.gene012347:intron | 40.0% | |
| GGAAATAGTTGCCATGTTCT+GGG | - | chr8.4:7056135-7056154 | None:intergenic | 40.0% | |
| GGCAACTATTTCCAGACAAA+AGG | + | chr8.4:7056142-7056161 | MS.gene012347:CDS | 40.0% | |
| GGTAAGTAACCGTGCTTAAT+TGG | + | chr8.4:7056336-7056355 | MS.gene012347:intron | 40.0% | |
| GTTGCTAAGTGATGCTTATG+GGG | + | chr8.4:7057072-7057091 | MS.gene012347:CDS | 40.0% | |
| GTTGGCACTAAATAAGCATG+TGG | - | chr8.4:7055550-7055569 | None:intergenic | 40.0% | |
| TACCTGAATATGCTCAAGCA+TGG | - | chr8.4:7058664-7058683 | None:intergenic | 40.0% | |
| TAGTTCACCCAATCTTGTCA+TGG | + | chr8.4:7055214-7055233 | MS.gene012347:CDS | 40.0% | |
| TATAGCCATCTCGTTGATCT+CGG | + | chr8.4:7057310-7057329 | MS.gene012347:CDS | 40.0% | |
| TATCAAACTATGTTTCCGGG+AGG | + | chr8.4:7055512-7055531 | MS.gene012347:intron | 40.0% | |
| TCACGTTTATACCCAGAACA+TGG | + | chr8.4:7056121-7056140 | MS.gene012347:CDS | 40.0% | |
| TCATGAAACATTATGCCAGC+AGG | + | chr8.4:7058071-7058090 | MS.gene012347:CDS | 40.0% | |
| TCGGTTTCGTCTTTAATCTC+CGG | + | chr8.4:7054304-7054323 | MS.gene012347:CDS | 40.0% | |
| TCTCATGCTCTCTACACTAT+TGG | + | chr8.4:7056491-7056510 | MS.gene012347:intron | 40.0% | |
| TCTCTTATTCTCCTGTTGCT+GGG | + | chr8.4:7057209-7057228 | MS.gene012347:CDS | 40.0% | |
| TCTTCCCAGTAGCTATTATC+AGG | - | chr8.4:7057808-7057827 | None:intergenic | 40.0% | |
| TCTTCGTCAACAATCAAGAG+TGG | + | chr8.4:7057955-7057974 | MS.gene012347:CDS | 40.0% | |
| TGAACCTGATTCACATGCAA+TGG | - | chr8.4:7057761-7057780 | None:intergenic | 40.0% | |
| TGGAAATAGTTGCCATGTTC+TGG | - | chr8.4:7056136-7056155 | None:intergenic | 40.0% | |
| TGGTATCACTAAATTCCTCC+CGG | - | chr8.4:7055530-7055549 | None:intergenic | 40.0% | |
| TTACACCCCATTATGTCATC+TGG | + | chr8.4:7055279-7055298 | MS.gene012347:intron | 40.0% | |
| TTCTCTTATTCTCCTGTTGC+TGG | + | chr8.4:7057208-7057227 | MS.gene012347:CDS | 40.0% | |
| TTGCAGTGGCGTATAAATCT+CGG | + | chr8.4:7054382-7054401 | MS.gene012347:CDS | 40.0% | |
| ! | CCTGCATCTGCTTTATTGAA+AGG | + | chr8.4:7056623-7056642 | MS.gene012347:intron | 40.0% |
| ! | GCTTAATAATCTCTGGAGAC+AGG | - | chr8.4:7057590-7057609 | None:intergenic | 40.0% |
| ! | GTGTTGCTAAGTGATGCTTA+TGG | + | chr8.4:7057070-7057089 | MS.gene012347:CDS | 40.0% |
| ! | TCAGGTATGCTAGTTTGAGA+GGG | + | chr8.4:7055153-7055172 | MS.gene012347:intron | 40.0% |
| !! | ACCTTTTGTCTGAGATGTGA+AGG | + | chr8.4:7058944-7058963 | MS.gene012347:CDS | 40.0% |
| !! | CCCAAGTTCCTTGCTATTAT+TGG | + | chr8.4:7054663-7054682 | MS.gene012347:intron | 40.0% |
| !! | CTTCTCTGAAACGTAAGTTC+AGG | - | chr8.4:7058760-7058779 | None:intergenic | 40.0% |
| !! | GAAAAGAGTACTTGCTTCTG+AGG | + | chr8.4:7058497-7058516 | MS.gene012347:CDS | 40.0% |
| !! | GCGTTGATTTATTCGTCATG+TGG | + | chr8.4:7054997-7055016 | MS.gene012347:intron | 40.0% |
| !! | TTCCAATGGCTTTGGAAGTT+TGG | + | chr8.4:7058447-7058466 | MS.gene012347:CDS | 40.0% |
| !!! | ACCGATGCTGTTTTTGACAA+TGG | - | chr8.4:7054289-7054308 | None:intergenic | 40.0% |
| !!! | CGCTGGTTGAGAGTTTTATT+TGG | + | chr8.4:7057358-7057377 | MS.gene012347:CDS | 40.0% |
| !!! | CTTTTTTCACAATGCAGAGC+TGG | + | chr8.4:7056075-7056094 | MS.gene012347:CDS | 40.0% |
| !!! | GATGCTGTTTTTGACAATGG+CGG | - | chr8.4:7054286-7054305 | None:intergenic | 40.0% |
| AACCTTCTTGTGAGTGCAGT+TGG | - | chr8.4:7055568-7055587 | None:intergenic | 45.0% | |
| AAGATCACCAGCTGTAGAAG+AGG | - | chr8.4:7058568-7058587 | None:intergenic | 45.0% | |
| AATAAACGATTCTCCGGCAC+CGG | - | chr8.4:7054346-7054365 | None:intergenic | 45.0% | |
| ACCACCATTGCATGTGAATC+AGG | + | chr8.4:7057754-7057773 | MS.gene012347:CDS | 45.0% | |
| ACCTGATTCACATGCAATGG+TGG | - | chr8.4:7057758-7057777 | None:intergenic | 45.0% | |
| AGTGATGCTTATGGGGTTGA+AGG | + | chr8.4:7057079-7057098 | MS.gene012347:CDS | 45.0% | |
| ATAGCCATCTCGTTGATCTC+GGG | + | chr8.4:7057311-7057330 | MS.gene012347:CDS | 45.0% | |
| ATCTAACCCTCTCTTTCCGT+TGG | + | chr8.4:7055997-7056016 | MS.gene012347:intron | 45.0% | |
| CCTTGTCTATAACCACACTC+GGG | - | chr8.4:7056217-7056236 | None:intergenic | 45.0% | |
| CGGTTACTTACCGAGTTAGA+AGG | - | chr8.4:7056328-7056347 | None:intergenic | 45.0% | |
| CTCAAACTAGCATACCTGAC+AGG | - | chr8.4:7055152-7055171 | None:intergenic | 45.0% | |
| CTCTCAGGATGATCAGAGAT+TGG | - | chr8.4:7058345-7058364 | None:intergenic | 45.0% | |
| GAAATTCGGCCACACTTTCT+AGG | + | chr8.4:7058406-7058425 | MS.gene012347:CDS | 45.0% | |
| GACCAAACTTCCAAAGCCAT+TGG | - | chr8.4:7058452-7058471 | None:intergenic | 45.0% | |
| GATTGGAAGAGGTGAATCGA+TGG | - | chr8.4:7058328-7058347 | None:intergenic | 45.0% | |
| GCAGAAGCTTCAATTACAGG+TGG | - | chr8.4:7057250-7057269 | None:intergenic | 45.0% | |
| GCAGCAGAAGCTTCAATTAC+AGG | - | chr8.4:7057253-7057272 | None:intergenic | 45.0% | |
| GCTTTAATGAATGGGGCTCA+CGG | + | chr8.4:7057163-7057182 | MS.gene012347:CDS | 45.0% | |
| GGACTGTGTGTTTGTGTAAC+AGG | + | chr8.4:7058789-7058808 | MS.gene012347:intron | 45.0% | |
| GGATGATCAGAGATTGGAAG+AGG | - | chr8.4:7058339-7058358 | None:intergenic | 45.0% | |
| GGCATGGTTACCAAGTGAAT+TGG | - | chr8.4:7054485-7054504 | None:intergenic | 45.0% | |
| GGGTTGTCCATGACAAGATT+GGG | - | chr8.4:7055224-7055243 | None:intergenic | 45.0% | |
| GTCCATGCTTGAGCATATTC+AGG | + | chr8.4:7058659-7058678 | MS.gene012347:CDS | 45.0% | |
| TACAGGTGGCAAACCAGTAT+GGG | - | chr8.4:7057236-7057255 | None:intergenic | 45.0% | |
| TATGGGGTTGAAGGTGAACT+GGG | + | chr8.4:7057088-7057107 | MS.gene012347:CDS | 45.0% | |
| TCTGCTGACCAGAATGTGAT+GGG | + | chr8.4:7058615-7058634 | MS.gene012347:CDS | 45.0% | |
| TCTGCTTTCCAACAAGAGTG+TGG | + | chr8.4:7058820-7058839 | MS.gene012347:CDS | 45.0% | |
| TGACAACCTCTTGATCGTCT+GGG | + | chr8.4:7057396-7057415 | MS.gene012347:CDS | 45.0% | |
| TGCAGTGGCGTATAAATCTC+GGG | + | chr8.4:7054383-7054402 | MS.gene012347:CDS | 45.0% | |
| TTACAGGTGGCAAACCAGTA+TGG | - | chr8.4:7057237-7057256 | None:intergenic | 45.0% | |
| TTAGGCGTGCTAATGTGCTA+AGG | - | chr8.4:7056409-7056428 | None:intergenic | 45.0% | |
| TTATGGGGTTGAAGGTGAAC+TGG | + | chr8.4:7057087-7057106 | MS.gene012347:CDS | 45.0% | |
| TTCTGCTGACCAGAATGTGA+TGG | + | chr8.4:7058614-7058633 | MS.gene012347:CDS | 45.0% | |
| TTCTTCTGACCCAAGTTCCT+TGG | - | chr8.4:7058031-7058050 | None:intergenic | 45.0% | |
| TTGACAACCTCTTGATCGTC+TGG | + | chr8.4:7057395-7057414 | MS.gene012347:CDS | 45.0% | |
| TTTCATCCCAGACGATCAAG+AGG | - | chr8.4:7057405-7057424 | None:intergenic | 45.0% | |
| ! | GAAATCGGTTCTCACGGAAA+AGG | + | chr8.4:7056998-7057017 | MS.gene012347:CDS | 45.0% |
| ! | GACTTGACGGATGACGAAAT+CGG | + | chr8.4:7056983-7057002 | MS.gene012347:CDS | 45.0% |
| ! | GATGACGAAATCGGTTCTCA+CGG | + | chr8.4:7056992-7057011 | MS.gene012347:CDS | 45.0% |
| ! | GTCAGGTATGCTAGTTTGAG+AGG | + | chr8.4:7055152-7055171 | MS.gene012347:intron | 45.0% |
| ! | TACGTTTGCTCACTTTGGGA+TGG | + | chr8.4:7056291-7056310 | MS.gene012347:intron | 45.0% |
| ! | TTCCAACAAGAGTGTGGTCA+GGG | + | chr8.4:7058826-7058845 | MS.gene012347:CDS | 45.0% |
| ! | TTTCCAACAAGAGTGTGGTC+AGG | + | chr8.4:7058825-7058844 | MS.gene012347:CDS | 45.0% |
| AAGCTCCTTGAGAGCTGACA+TGG | - | chr8.4:7058911-7058930 | None:intergenic | 50.0% | |
| AAGGAGATGGAAGACTCGTG+TGG | - | chr8.4:7055867-7055886 | None:intergenic | 50.0% | |
| AAGTGTGGCCGAATTTCCTG+TGG | - | chr8.4:7058403-7058422 | None:intergenic | 50.0% | |
| AATCTCCGGCACCATTTCTC+AGG | + | chr8.4:7054318-7054337 | MS.gene012347:CDS | 50.0% | |
| ACAGCTTCCTCTTCTACAGC+TGG | + | chr8.4:7058558-7058577 | MS.gene012347:CDS | 50.0% | |
| ATGGAGCCAACGGAAAGAGA+GGG | - | chr8.4:7056006-7056025 | None:intergenic | 50.0% | |
| CACAGTACTTTGCTCTACGC+TGG | + | chr8.4:7057341-7057360 | MS.gene012347:CDS | 50.0% | |
| CCACCGCTAATTCTCGAAGA+AGG | + | chr8.4:7054455-7054474 | MS.gene012347:CDS | 50.0% | |
| CCCGAGTGTGGTTATAGACA+AGG | + | chr8.4:7056214-7056233 | MS.gene012347:CDS | 50.0% | |
| CCTTCTTCGAGAATTAGCGG+TGG | - | chr8.4:7054458-7054477 | None:intergenic | 50.0% | |
| CGGGTTGTCCATGACAAGAT+TGG | - | chr8.4:7055225-7055244 | None:intergenic | 50.0% | |
| GAGGCAGAGCAACAAGATGA+TGG | + | chr8.4:7058114-7058133 | MS.gene012347:CDS | 50.0% | |
| GCAGTATAACGGCCAAATGC+TGG | - | chr8.4:7055317-7055336 | None:intergenic | 50.0% | |
| GCAGTGGCGTATAAATCTCG+GGG | + | chr8.4:7054384-7054403 | MS.gene012347:CDS | 50.0% | |
| GGAATCTGGAAGCCCAAGAA+AGG | - | chr8.4:7056717-7056736 | None:intergenic | 50.0% | |
| GGCACGACGAAGATCATCAA+CGG | - | chr8.4:7054437-7054456 | None:intergenic | 50.0% | |
| GGGCGCAATAATGATTCCAC+AGG | + | chr8.4:7058384-7058403 | MS.gene012347:CDS | 50.0% | |
| GGTGCCAAGGCATATTGAGA+CGG | + | chr8.4:7056164-7056183 | MS.gene012347:CDS | 50.0% | |
| GGTTGATCCCCACGTTACAA+AGG | + | chr8.4:7055184-7055203 | MS.gene012347:CDS | 50.0% | |
| GTGTGGTCAGGGAACTTCAT+TGG | + | chr8.4:7058837-7058856 | MS.gene012347:CDS | 50.0% | |
| TACTGCCATGTCAGCTCTCA+AGG | + | chr8.4:7058903-7058922 | MS.gene012347:CDS | 50.0% | |
| TAGCCATCTCGTTGATCTCG+GGG | + | chr8.4:7057312-7057331 | MS.gene012347:CDS | 50.0% | |
| TCCTGAGAGCAACCTATCTC+CGG | + | chr8.4:7058356-7058375 | MS.gene012347:CDS | 50.0% | |
| TGCCAACTGCACTCACAAGA+AGG | + | chr8.4:7055563-7055582 | MS.gene012347:intron | 50.0% | |
| TGTCTTAGACATCCCGAGTG+TGG | + | chr8.4:7056202-7056221 | MS.gene012347:CDS | 50.0% | |
| TTCACAATGCAGAGCTGGAG+AGG | + | chr8.4:7056080-7056099 | MS.gene012347:CDS | 50.0% | |
| TTCCCTGACCACACTCTTGT+TGG | - | chr8.4:7058831-7058850 | None:intergenic | 50.0% | |
| TTGTAACGTGGGGATCAACC+AGG | - | chr8.4:7055184-7055203 | None:intergenic | 50.0% | |
| ! | AATCTCTGGAGACAGGTCGT+AGG | - | chr8.4:7057583-7057602 | None:intergenic | 50.0% |
| ! | GAATGAGTTTTCCTCGCTGC+CGG | - | chr8.4:7058193-7058212 | None:intergenic | 50.0% |
| ! | GGTATGCTAGTTTGAGAGGG+CGG | + | chr8.4:7055156-7055175 | MS.gene012347:intron | 50.0% |
| ! | GTGTAACTGTTGCTTGGCTG+AGG | - | chr8.4:7056246-7056265 | None:intergenic | 50.0% |
| !! | CAGCGTAGAGCAAAGTACTG+TGG | - | chr8.4:7057343-7057362 | None:intergenic | 50.0% |
| !! | TTCCAGACAAAAGGGTGCCA+AGG | + | chr8.4:7056151-7056170 | MS.gene012347:CDS | 50.0% |
| !!! | TGTTTTGGTTGGCAAAGGGC+AGG | + | chr8.4:7058879-7058898 | MS.gene012347:CDS | 50.0% |
| ACCGGAGATAGGTTGCTCTC+AGG | - | chr8.4:7058360-7058379 | None:intergenic | 55.0% | |
| CAACCCCGAGATCAACGAGA+TGG | - | chr8.4:7057318-7057337 | None:intergenic | 55.0% | |
| CAATGCAGAGCTGGAGAGGA+TGG | + | chr8.4:7056084-7056103 | MS.gene012347:CDS | 55.0% | |
| CATTTCTCAGGAACCGGTGC+CGG | + | chr8.4:7054330-7054349 | MS.gene012347:CDS | 55.0% | |
| CGGCACCATTTCTCAGGAAC+CGG | + | chr8.4:7054324-7054343 | MS.gene012347:CDS | 55.0% | |
| CGGTTCCTGAGAAATGGTGC+CGG | - | chr8.4:7054326-7054345 | None:intergenic | 55.0% | |
| GATGGAGCCAACGGAAAGAG+AGG | - | chr8.4:7056007-7056026 | None:intergenic | 55.0% | |
| GGCTCACGGTTCAGTTGCAA+TGG | + | chr8.4:7057177-7057196 | MS.gene012347:CDS | 55.0% | |
| GTCACCACAGATGGAGCCAA+CGG | - | chr8.4:7056016-7056035 | None:intergenic | 55.0% | |
| TCATTATTGCGCCCTGCCAC+CGG | - | chr8.4:7058378-7058397 | None:intergenic | 55.0% | |
| TGAGAGCAACCTATCTCCGG+TGG | + | chr8.4:7058359-7058378 | MS.gene012347:CDS | 55.0% | |
| ! | CAAGGCGCTCCACATCAACT+TGG | - | chr8.4:7056859-7056878 | None:intergenic | 55.0% |
| ! | TGCCTTGGCACCCTTTTGTC+TGG | - | chr8.4:7056156-7056175 | None:intergenic | 55.0% |
| ! | TTCTACAAGCGCAGGTGTCG+AGG | - | chr8.4:7057695-7057714 | None:intergenic | 55.0% |
| !! | AATGGCGGATCCAACAGAGC+CGG | - | chr8.4:7054271-7054290 | None:intergenic | 55.0% |
| !! | CTTTCCGTTGGCTCCATCTG+TGG | + | chr8.4:7056009-7056028 | MS.gene012347:intron | 55.0% |
| AGCAACCTATCTCCGGTGGC+AGG | + | chr8.4:7058363-7058382 | MS.gene012347:CDS | 60.0% | |
| CCAGTATGGGACCCAGCAAC+AGG | - | chr8.4:7057223-7057242 | None:intergenic | 60.0% | |
| CCTGTTGCTGGGTCCCATAC+TGG | + | chr8.4:7057220-7057239 | MS.gene012347:CDS | 60.0% | |
| GCAACCTATCTCCGGTGGCA+GGG | + | chr8.4:7058364-7058383 | MS.gene012347:CDS | 60.0% | |
| TAGCAGAAACACCGGCAGCG+AGG | + | chr8.4:7058179-7058198 | MS.gene012347:CDS | 60.0% | |
| TAGTTTGAGAGGGCGGCTCC+TGG | + | chr8.4:7055163-7055182 | MS.gene012347:CDS | 60.0% | |
| TGCAGAGCTGGAGAGGATGG+TGG | + | chr8.4:7056087-7056106 | MS.gene012347:CDS | 60.0% | |
| !! | CGGCACCGGTTCCTGAGAAA+TGG | - | chr8.4:7054332-7054351 | None:intergenic | 60.0% |
| !! | GCTGGAGAGGATGGTGGATC+AGG | + | chr8.4:7056093-7056112 | MS.gene012347:CDS | 60.0% |
| GGCGGATCCAACAGAGCCGG+TGG | - | chr8.4:7054268-7054287 | None:intergenic | 70.0% | |
| TGCGCCCTGCCACCGGAGAT+AGG | - | chr8.4:7058371-7058390 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 7054262 | 7058963 | 7054262 | ID=MS.gene012347 |
| chr8.4 | mRNA | 7054262 | 7058963 | 7054262 | ID=MS.gene012347.t1;Parent=MS.gene012347 |
| chr8.4 | exon | 7054262 | 7054476 | 7054262 | ID=MS.gene012347.t1.exon1;Parent=MS.gene012347.t1 |
| chr8.4 | CDS | 7054262 | 7054476 | 7054262 | ID=cds.MS.gene012347.t1;Parent=MS.gene012347.t1 |
| chr8.4 | exon | 7055157 | 7055260 | 7055157 | ID=MS.gene012347.t1.exon2;Parent=MS.gene012347.t1 |
| chr8.4 | CDS | 7055157 | 7055260 | 7055157 | ID=cds.MS.gene012347.t1;Parent=MS.gene012347.t1 |
| chr8.4 | exon | 7056059 | 7056235 | 7056059 | ID=MS.gene012347.t1.exon3;Parent=MS.gene012347.t1 |
| chr8.4 | CDS | 7056059 | 7056235 | 7056059 | ID=cds.MS.gene012347.t1;Parent=MS.gene012347.t1 |
| chr8.4 | exon | 7056819 | 7058680 | 7056819 | ID=MS.gene012347.t1.exon4;Parent=MS.gene012347.t1 |
| chr8.4 | CDS | 7056819 | 7058680 | 7056819 | ID=cds.MS.gene012347.t1;Parent=MS.gene012347.t1 |
| chr8.4 | exon | 7058811 | 7058963 | 7058811 | ID=MS.gene012347.t1.exon5;Parent=MS.gene012347.t1 |
| chr8.4 | CDS | 7058811 | 7058963 | 7058811 | ID=cds.MS.gene012347.t1;Parent=MS.gene012347.t1 |
| Gene Sequence |
| Protein sequence |
