Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073313.t1 | XP_003610057.2 | 97.5 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.00E+00 | 1586.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073313.t1 | Q92609 | 26.8 | 444 | 204 | 9 | 23 | 447 | 71 | 412 | 1.2e-32 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073313.t1 | G7JUA9 | 97.5 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0e+00 | 1586.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene073313 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene073313 | 0.811874 | 5.63E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene073313 | 0.833459 | 5.27E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene073313 | 0.804183 | 2.44E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene073313 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene052776 | MS.gene073313 | 0.808325 | 3.27E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene073313 | 0.819672 | 1.03E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene073313 | 0.805104 | 1.57E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene073313 | 0.801444 | 8.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene037046 | MS.gene073313 | PPI |
| MS.gene55117 | MS.gene073313 | PPI |
| MS.gene073313 | MS.gene96351 | PPI |
| MS.gene073313 | MS.gene073312 | PPI |
| MS.gene073313 | MS.gene07739 | PPI |
| MS.gene073313 | MS.gene012347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073313.t1 | MTR_4g127450 | 97.488 | 836 | 21 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1679 |
| MS.gene073313.t1 | MTR_4g127450 | 97.343 | 715 | 19 | 0 | 122 | 836 | 1 | 715 | 0.0 | 1437 |
| MS.gene073313.t1 | MTR_4g127450 | 97.313 | 670 | 18 | 0 | 167 | 836 | 1 | 670 | 0.0 | 1336 |
| MS.gene073313.t1 | MTR_2g037930 | 64.318 | 880 | 259 | 11 | 1 | 836 | 1 | 869 | 0.0 | 1053 |
| MS.gene073313.t1 | MTR_8g085300 | 27.381 | 168 | 93 | 5 | 38 | 181 | 123 | 285 | 3.55e-11 | 66.6 |
| MS.gene073313.t1 | MTR_3g083840 | 26.601 | 203 | 111 | 7 | 38 | 209 | 112 | 307 | 3.56e-11 | 66.6 |
| MS.gene073313.t1 | MTR_4g114580 | 28.070 | 171 | 88 | 6 | 38 | 181 | 140 | 302 | 5.92e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073313.t1 | AT4G29950 | 53.801 | 855 | 305 | 24 | 32 | 836 | 14 | 828 | 0.0 | 788 |
| MS.gene073313.t1 | AT4G29950 | 53.129 | 815 | 294 | 23 | 72 | 836 | 44 | 820 | 0.0 | 758 |
| MS.gene073313.t1 | AT2G19240 | 48.851 | 870 | 330 | 28 | 31 | 836 | 22 | 840 | 0.0 | 686 |
| MS.gene073313.t1 | AT2G19240 | 49.425 | 870 | 330 | 27 | 31 | 836 | 22 | 845 | 0.0 | 686 |
| MS.gene073313.t1 | AT4G29950 | 51.147 | 741 | 274 | 23 | 146 | 836 | 1 | 703 | 0.0 | 639 |
| MS.gene073313.t1 | AT5G57210 | 54.476 | 659 | 268 | 13 | 30 | 671 | 25 | 668 | 0.0 | 617 |
| MS.gene073313.t1 | AT5G57210 | 51.197 | 543 | 234 | 12 | 146 | 671 | 1 | 529 | 4.52e-153 | 461 |
Find 172 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTATTCTCCTGTTGC+TGG | 0.195760 | 8.1:-7353914 | MS.gene073313:CDS |
| TGGAAATAGTTGCCATGTTC+TGG | 0.229971 | 8.1:+7354989 | None:intergenic |
| ATGGGAACTTTAAAGAATAT+TGG | 0.231802 | 8.1:-7352489 | MS.gene073313:CDS |
| TTTATCAGATAATAGTAAAA+TGG | 0.259709 | 8.1:-7353693 | MS.gene073313:CDS |
| TTCCAATGGCTTTGGAAGTT+TGG | 0.270410 | 8.1:-7352675 | MS.gene073313:CDS |
| GAAATTCGGCCACACTTTCT+AGG | 0.287597 | 8.1:-7352716 | MS.gene073313:CDS |
| AACAATCAAGAGTGGTAAAA+AGG | 0.290842 | 8.1:-7353159 | MS.gene073313:CDS |
| CCTGTTGCTGGGTCCCATAC+TGG | 0.298750 | 8.1:-7353902 | MS.gene073313:CDS |
| TCTTCCCAGTAGCTATTATC+AGG | 0.301549 | 8.1:+7353317 | None:intergenic |
| TGGAAGTTTGGTCGTAATAA+TGG | 0.314220 | 8.1:-7352663 | MS.gene073313:CDS |
| CGTTTATTCGATGATCTTAG+AGG | 0.318032 | 8.1:-7356763 | MS.gene073313:CDS |
| ACCACCATTGCATGTGAATC+AGG | 0.320017 | 8.1:-7353368 | MS.gene073313:CDS |
| TGCAGTGGCGTATAAATCTT+GGG | 0.329188 | 8.1:-7356738 | MS.gene073313:CDS |
| TTAAAGTTCCCATCACATTC+TGG | 0.329403 | 8.1:+7352499 | None:intergenic |
| TGAATAAATTCCAATGGCTT+TGG | 0.340110 | 8.1:-7352683 | MS.gene073313:CDS |
| AACACAATGGTCTGTATCTT+AGG | 0.344300 | 8.1:+7354070 | None:intergenic |
| TTCCCTGACCACACTCTTGT+TGG | 0.349187 | 8.1:+7352294 | None:intergenic |
| TGGGAACTTTAAAGAATATT+GGG | 0.350164 | 8.1:-7352488 | MS.gene073313:CDS |
| TCATGATATTTGAACTCATT+AGG | 0.352589 | 8.1:+7352894 | None:intergenic |
| GCAGCAGAAGCTTCAATTAC+AGG | 0.367492 | 8.1:+7353872 | None:intergenic |
| GTGTTGCTAAGTGATGCTTA+TGG | 0.369479 | 8.1:-7354052 | MS.gene073313:CDS |
| ACTTTGATCGTTATACTTGT+TGG | 0.372163 | 8.1:+7352590 | None:intergenic |
| TGTTGCTAAGTGATGCTTAT+GGG | 0.373836 | 8.1:-7354051 | MS.gene073313:CDS |
| TTGACAACCTCTTGATCGTC+TGG | 0.376659 | 8.1:-7353727 | MS.gene073313:CDS |
| GTCCATGCTTGAGCATATTC+AGG | 0.378528 | 8.1:-7352463 | MS.gene073313:intron |
| TTATCAGGTAATAAACTCTT+AGG | 0.382184 | 8.1:+7353332 | None:intergenic |
| TTGCAGTGGCGTATAAATCT+TGG | 0.390542 | 8.1:-7356739 | MS.gene073313:CDS |
| TAATGATTCCACAGGAAATT+CGG | 0.392355 | 8.1:-7352730 | MS.gene073313:CDS |
| GTTTAAGTTCTTCAGCACTA+TGG | 0.400618 | 8.1:+7353279 | None:intergenic |
| TTACAGGTGGCAAACCAGTA+TGG | 0.402275 | 8.1:+7353888 | None:intergenic |
| AATCTCCGGCACCATTTCTC+AGG | 0.406744 | 8.1:-7356803 | MS.gene073313:CDS |
| GGCAACTATTTCCAGACAAA+AGG | 0.406937 | 8.1:-7354980 | MS.gene073313:CDS |
| TTCTTCTGACCCAAGTTCCT+TGG | 0.407632 | 8.1:+7353094 | None:intergenic |
| GGGTTGTCCATGACAAGATT+TGG | 0.413427 | 8.1:+7355901 | None:intergenic |
| GCTGGAGAGGATGGTGGATC+AGG | 0.417731 | 8.1:-7355029 | MS.gene073313:CDS |
| CGGCACCATTTCTCAGGAAC+CGG | 0.419436 | 8.1:-7356797 | MS.gene073313:CDS |
| CTTTATATGCAGATAGTACA+TGG | 0.422407 | 8.1:-7355075 | MS.gene073313:intron |
| TATAGCCATCTCGTTGATCT+CGG | 0.425792 | 8.1:-7353812 | MS.gene073313:CDS |
| CTCTTGATTGTTGACGAAGA+TGG | 0.426953 | 8.1:+7353170 | None:intergenic |
| AGCAACCTATCTCCGGTGGC+AGG | 0.427699 | 8.1:-7352759 | MS.gene073313:CDS |
| CTGGGAAGCTTAATAATCTC+TGG | 0.432714 | 8.1:+7353528 | None:intergenic |
| ATAGCCATCTCGTTGATCTC+GGG | 0.436878 | 8.1:-7353811 | MS.gene073313:CDS |
| TCTCTTATTCTCCTGTTGCT+GGG | 0.437137 | 8.1:-7353913 | MS.gene073313:CDS |
| TTATGGGGTTGAAGGTGAAC+TGG | 0.438731 | 8.1:-7354035 | MS.gene073313:CDS |
| GAAGATCTATCCAAGGAACT+TGG | 0.440583 | 8.1:-7353104 | MS.gene073313:CDS |
| CGGCACCGGTTCCTGAGAAA+TGG | 0.440993 | 8.1:+7356792 | None:intergenic |
| AATCATGCCACCGGCTCTGT+TGG | 0.445482 | 8.1:-7356863 | None:intergenic |
| GGAAATAGTTGCCATGTTCT+GGG | 0.450619 | 8.1:+7354990 | None:intergenic |
| CCAGTATGGGACCCAGCAAC+AGG | 0.457235 | 8.1:+7353902 | None:intergenic |
| TATTACCTGATAATAGCTAC+TGG | 0.465123 | 8.1:-7353322 | MS.gene073313:CDS |
| CTCTCAGGATGATCAGAGAT+TGG | 0.467104 | 8.1:+7352780 | None:intergenic |
| TGTTTGAAGCTTTAATGAAT+GGG | 0.467577 | 8.1:-7353967 | MS.gene073313:CDS |
| TGCGCCCTGCCACCGGAGAT+AGG | 0.468340 | 8.1:+7352754 | None:intergenic |
| GAAATCGGTTCTCACGGAAA+AGG | 0.478306 | 8.1:-7354124 | MS.gene073313:CDS |
| GTCTCACAGGAAAGTAGTGT+TGG | 0.483922 | 8.1:-7352867 | MS.gene073313:CDS |
| CAAGGCGCTCCACATCAACT+TGG | 0.486995 | 8.1:+7354266 | None:intergenic |
| GTGTGGTCAGGGAACTTCAT+TGG | 0.489228 | 8.1:-7352285 | MS.gene073313:CDS |
| TCGGTTTCGTCTTTAATCTC+CGG | 0.491898 | 8.1:-7356817 | MS.gene073313:CDS |
| TACTGCCATGTCAGCTCTCA+AGG | 0.492107 | 8.1:-7352219 | MS.gene073313:CDS |
| GACTTGACGGATGACGAAAT+CGG | 0.492393 | 8.1:-7354139 | MS.gene073313:CDS |
| TTTCCAACAAGAGTGTGGTC+AGG | 0.497315 | 8.1:-7352297 | MS.gene073313:CDS |
| TAGTTTGAGAGGGCGGCTCC+TGG | 0.499264 | 8.1:-7355959 | MS.gene073313:CDS |
| AGTGATGCTTATGGGGTTGA+AGG | 0.500001 | 8.1:-7354043 | MS.gene073313:CDS |
| ATGTTTGAAGCTTTAATGAA+TGG | 0.501384 | 8.1:-7353968 | MS.gene073313:CDS |
| AAATTTCATTAATTTCATCA+AGG | 0.506660 | 8.1:+7352832 | None:intergenic |
| ACCGGAGATAGGTTGCTCTC+AGG | 0.509000 | 8.1:+7352765 | None:intergenic |
| TCATTATTGCGCCCTGCCAC+CGG | 0.512914 | 8.1:+7352747 | None:intergenic |
| CTACAGAATGATTATCCTGC+TGG | 0.514134 | 8.1:+7353036 | None:intergenic |
| CATTTCTCAGGAACCGGTGC+CGG | 0.515085 | 8.1:-7356791 | MS.gene073313:CDS |
| GACCAAACTTCCAAAGCCAT+TGG | 0.515271 | 8.1:+7352673 | None:intergenic |
| TTACCTTCTTCGAGAATTAG+CGG | 0.517058 | 8.1:+7356663 | None:intergenic |
| CGTCTCACATCTCAGACAAA+AGG | 0.517629 | 8.1:+7352177 | None:intergenic |
| GCTTAATAATCTCTGGAGAC+AGG | 0.520951 | 8.1:+7353535 | None:intergenic |
| GCTGAAGAACTTAAACAAGA+TGG | 0.522754 | 8.1:-7353272 | MS.gene073313:CDS |
| TCCTGAGAGCAACCTATCTC+CGG | 0.524052 | 8.1:-7352766 | MS.gene073313:CDS |
| CAATGCAGAGCTGGAGAGGA+TGG | 0.530243 | 8.1:-7355038 | MS.gene073313:CDS |
| AAGATCACCAGCTGTAGAAG+AGG | 0.531139 | 8.1:+7352557 | None:intergenic |
| TCTGACATAAGCAACAATTA+CGG | 0.532883 | 8.1:-7352984 | MS.gene073313:CDS |
| TTCACAATGCAGAGCTGGAG+AGG | 0.533828 | 8.1:-7355042 | MS.gene073313:CDS |
| GCAACTATTTCCAGACAAAA+GGG | 0.537102 | 8.1:-7354979 | MS.gene073313:CDS |
| GTCAGGTATGCTAGTTTGAG+AGG | 0.540089 | 8.1:-7355970 | MS.gene073313:intron |
| ATAGCTACTGGGAAGAAAAG+TGG | 0.540693 | 8.1:-7353310 | MS.gene073313:CDS |
| TTATGTTCTCCAAGTTGATG+TGG | 0.541208 | 8.1:-7354275 | MS.gene073313:CDS |
| GTATCATTTATTGTCGCATG+TGG | 0.542626 | 8.1:-7353846 | MS.gene073313:CDS |
| AAGCTCCTTGAGAGCTGACA+TGG | 0.543178 | 8.1:+7352214 | None:intergenic |
| TTGTTATATTCTACAAGCGC+AGG | 0.545602 | 8.1:+7353422 | None:intergenic |
| AATAAACGATTCTCCGGCAC+CGG | 0.546739 | 8.1:+7356778 | None:intergenic |
| TCATGAAACATTATGCCAGC+AGG | 0.547111 | 8.1:-7353051 | MS.gene073313:CDS |
| ACCTTGTCTATAACCACACT+CGG | 0.548812 | 8.1:+7354907 | None:intergenic |
| AATTTCATTAATTTCATCAA+GGG | 0.549080 | 8.1:+7352833 | None:intergenic |
| TCATCGAATAAACGATTCTC+CGG | 0.551047 | 8.1:+7356772 | None:intergenic |
| TACAGGTGGCAAACCAGTAT+GGG | 0.551405 | 8.1:+7353889 | None:intergenic |
| TTCCAACAAGAGTGTGGTCA+GGG | 0.551719 | 8.1:-7352296 | MS.gene073313:CDS |
| GAAGAAGATATAGAAAATCT+CGG | 0.552372 | 8.1:-7353077 | MS.gene073313:CDS |
| GAAGTTGAAGATGAAGAAGA+TGG | 0.552384 | 8.1:+7356709 | None:intergenic |
| GGATGATCAGAGATTGGAAG+AGG | 0.553620 | 8.1:+7352786 | None:intergenic |
| ATATCATGAAAATGTCTCAC+AGG | 0.553655 | 8.1:-7352880 | MS.gene073313:CDS |
| ACAGCTTCCTCTTCTACAGC+TGG | 0.554308 | 8.1:-7352564 | MS.gene073313:CDS |
| GCTTTAATGAATGGGGCTCA+CGG | 0.557113 | 8.1:-7353959 | MS.gene073313:CDS |
| GAGGCAGAGCAACAAGATGA+TGG | 0.560054 | 8.1:-7353008 | MS.gene073313:CDS |
| GATTGGAAGAGGTGAATCGA+TGG | 0.561413 | 8.1:+7352797 | None:intergenic |
| TCTCACAGGAAAGTAGTGTT+GGG | 0.563238 | 8.1:-7352866 | MS.gene073313:CDS |
| ACTTTCATCCTTTGTAACGT+GGG | 0.565238 | 8.1:+7355930 | None:intergenic |
| AAATCCGTCTCAATATGCCT+TGG | 0.567226 | 8.1:+7354954 | None:intergenic |
| GGGCGCAATAATGATTCCAC+AGG | 0.567344 | 8.1:-7352738 | MS.gene073313:CDS |
| TTCTACAAGCGCAGGTGTCG+AGG | 0.567649 | 8.1:+7353430 | None:intergenic |
| CACAGTACTTTGCTCTACGC+TGG | 0.568902 | 8.1:-7353781 | MS.gene073313:CDS |
| GTTTGAAGCTTTAATGAATG+GGG | 0.569176 | 8.1:-7353966 | MS.gene073313:CDS |
| ACTCATTAGGAGAACTAGCT+AGG | 0.569589 | 8.1:+7352907 | None:intergenic |
| GGCTCACGGTTCAGTTGCAA+TGG | 0.571038 | 8.1:-7353945 | MS.gene073313:CDS |
| TAATCATTCTGTAGCAGTTG+AGG | 0.571250 | 8.1:-7353027 | MS.gene073313:CDS |
| TTCCAGACAAAAGGGTGCCA+AGG | 0.572383 | 8.1:-7354971 | MS.gene073313:CDS |
| TATGGGGTTGAAGGTGAACT+GGG | 0.574976 | 8.1:-7354034 | MS.gene073313:CDS |
| AAGATCTATCCAAGGAACTT+GGG | 0.576219 | 8.1:-7353103 | MS.gene073313:CDS |
| CCCGAGTGTGGTTATAGACA+AGG | 0.580071 | 8.1:-7354908 | MS.gene073313:intron |
| CGGTTCCTGAGAAATGGTGC+CGG | 0.583182 | 8.1:+7356798 | None:intergenic |
| AGGATCTTTCATTCATCTCG+CGG | 0.583363 | 8.1:-7353635 | MS.gene073313:CDS |
| TTGTAACGTGGGGATCAACC+AGG | 0.583633 | 8.1:+7355941 | None:intergenic |
| GTTGCTAAGTGATGCTTATG+GGG | 0.585951 | 8.1:-7354050 | MS.gene073313:CDS |
| TACTTTCATCCTTTGTAACG+TGG | 0.587230 | 8.1:+7355929 | None:intergenic |
| TAGCCATCTCGTTGATCTCG+GGG | 0.587269 | 8.1:-7353810 | MS.gene073313:CDS |
| GCAACCTATCTCCGGTGGCA+GGG | 0.587568 | 8.1:-7352758 | MS.gene073313:CDS |
| CCACCGCTAATTCTCGAAGA+AGG | 0.589225 | 8.1:-7356666 | MS.gene073313:intron |
| TTGCCGGAAAATCATGCCAC+CGG | 0.589609 | 8.1:-7356872 | None:intergenic |
| GGCGGATCCAACAGAGCCGG+TGG | 0.589682 | 8.1:+7356856 | None:intergenic |
| GGTTGATCCCCACGTTACAA+AGG | 0.589815 | 8.1:-7355938 | MS.gene073313:CDS |
| TTTATATGCAGATAGTACAT+GGG | 0.590854 | 8.1:-7355074 | MS.gene073313:intron |
| TGACAACCTCTTGATCGTCT+GGG | 0.594198 | 8.1:-7353726 | MS.gene073313:CDS |
| TAAAACTGAATAAATTCCAA+TGG | 0.598877 | 8.1:-7352689 | MS.gene073313:CDS |
| ATTACCTGATAATAGCTACT+GGG | 0.602058 | 8.1:-7353321 | MS.gene073313:CDS |
| TTCTGCTGACCAGAATGTGA+TGG | 0.603860 | 8.1:-7352508 | MS.gene073313:CDS |
| ACTTAATGCAAGAGTCTGCA+AGG | 0.606324 | 8.1:+7353466 | None:intergenic |
| TTTCATCCCAGACGATCAAG+AGG | 0.607164 | 8.1:+7353720 | None:intergenic |
| AATGGCGGATCCAACAGAGC+CGG | 0.608631 | 8.1:+7356853 | None:intergenic |
| CTTTCATCCTTTGTAACGTG+GGG | 0.608769 | 8.1:+7355931 | None:intergenic |
| ATTGGAAGAGGTGAATCGAT+GGG | 0.609774 | 8.1:+7352798 | None:intergenic |
| GAAAAGAGTACTTGCTTCTG+AGG | 0.610033 | 8.1:-7352625 | MS.gene073313:CDS |
| TGCAGAGCTGGAGAGGATGG+TGG | 0.616704 | 8.1:-7355035 | MS.gene073313:CDS |
| TTTGTTAGAAGATCTATCCA+AGG | 0.617410 | 8.1:-7353111 | MS.gene073313:CDS |
| TAGTTCACCAAATCTTGTCA+TGG | 0.618965 | 8.1:-7355908 | MS.gene073313:CDS |
| TCACGTTTATACCCAGAACA+TGG | 0.622550 | 8.1:-7355001 | MS.gene073313:CDS |
| ATGATCTTAGAGGTTTGCAG+TGG | 0.624245 | 8.1:-7356753 | MS.gene073313:CDS |
| TCAGGTATGCTAGTTTGAGA+GGG | 0.624547 | 8.1:-7355969 | MS.gene073313:intron |
| ACTTGGAGAACATAAAGCAA+AGG | 0.628302 | 8.1:+7354283 | None:intergenic |
| GCAGTGGCGTATAAATCTTG+GGG | 0.633132 | 8.1:-7356737 | MS.gene073313:CDS |
| TACCTGAATATGCTCAAGCA+TGG | 0.637984 | 8.1:+7352461 | None:intergenic |
| CAACCCCGAGATCAACGAGA+TGG | 0.640135 | 8.1:+7353807 | None:intergenic |
| GGTATGCTAGTTTGAGAGGG+CGG | 0.644507 | 8.1:-7355966 | MS.gene073313:CDS |
| TCTGCTGACCAGAATGTGAT+GGG | 0.647152 | 8.1:-7352507 | MS.gene073313:CDS |
| GATGACGAAATCGGTTCTCA+CGG | 0.647201 | 8.1:-7354130 | MS.gene073313:CDS |
| TGAACCTGATTCACATGCAA+TGG | 0.648752 | 8.1:+7353364 | None:intergenic |
| AATCTCTGGAGACAGGTCGT+AGG | 0.651148 | 8.1:+7353542 | None:intergenic |
| TAAAATGGAAAAGCATGCAG+AGG | 0.651374 | 8.1:-7353678 | MS.gene073313:CDS |
| GGTGCCAAGGCATATTGAGA+CGG | 0.652499 | 8.1:-7354958 | MS.gene073313:CDS |
| ATTTATCTCAGCTATTGCTG+TGG | 0.655369 | 8.1:-7353609 | MS.gene073313:CDS |
| CTTGTAGAATATAACAACAA+GGG | 0.657239 | 8.1:-7353416 | MS.gene073313:CDS |
| CCTTGTCTATAACCACACTC+GGG | 0.658075 | 8.1:+7354908 | None:intergenic |
| GCTTGTAGAATATAACAACA+AGG | 0.658953 | 8.1:-7353417 | MS.gene073313:CDS |
| ACCTGATTCACATGCAATGG+TGG | 0.659619 | 8.1:+7353367 | None:intergenic |
| TCTGCTTTCCAACAAGAGTG+TGG | 0.661245 | 8.1:-7352302 | MS.gene073313:CDS |
| AGATGTCTTAGCAGAAACAC+CGG | 0.661553 | 8.1:-7352951 | MS.gene073313:CDS |
| GGCACGACGAAGATCATCAA+CGG | 0.661655 | 8.1:+7356687 | None:intergenic |
| AAGTGTGGCCGAATTTCCTG+TGG | 0.661701 | 8.1:+7352722 | None:intergenic |
| TGAGAGCAACCTATCTCCGG+TGG | 0.662239 | 8.1:-7352763 | MS.gene073313:CDS |
| TCTTCGTCAACAATCAAGAG+TGG | 0.663979 | 8.1:-7353167 | MS.gene073313:CDS |
| TGTCTTAGACATCCCGAGTG+TGG | 0.664217 | 8.1:-7354920 | MS.gene073313:CDS |
| TTATATGCAGATAGTACATG+GGG | 0.672097 | 8.1:-7355073 | MS.gene073313:intron |
| GCAGAAGCTTCAATTACAGG+TGG | 0.678657 | 8.1:+7353875 | None:intergenic |
| AGCATCACTTAGCAACACAA+TGG | 0.690065 | 8.1:+7354057 | None:intergenic |
| CCTTCTTCGAGAATTAGCGG+TGG | 0.702456 | 8.1:+7356666 | None:intergenic |
| TAGCAGAAACACCGGCAGCG+AGG | 0.719930 | 8.1:-7352943 | MS.gene073313:CDS |
| CAGCGTAGAGCAAAGTACTG+TGG | 0.720652 | 8.1:+7353782 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCATTAATTTCATCA+AGG | + | chr8.1:7356211-7356230 | None:intergenic | 15.0% |
| !! | AATTTCATTAATTTCATCAA+GGG | + | chr8.1:7356210-7356229 | None:intergenic | 15.0% |
| !! | ACATAGTTTGATATAAATTA+TGG | + | chr8.1:7353423-7353442 | None:intergenic | 15.0% |
| !! | ACTAAAATTTAAAAACAAGT+TGG | - | chr8.1:7356620-7356639 | MS.gene073313:intron | 15.0% |
| !! | GTAGAAATAAATATATAATC+TGG | + | chr8.1:7353390-7353409 | None:intergenic | 15.0% |
| !! | TTTAGTTAACTAGTAAAAAA+CGG | - | chr8.1:7354359-7354378 | MS.gene073313:intron | 15.0% |
| !! | TTTATCAGATAATAGTAAAA+TGG | - | chr8.1:7355347-7355366 | MS.gene073313:intron | 15.0% |
| !!! | ATCAATATCATTTTATATCA+AGG | - | chr8.1:7352798-7352817 | MS.gene073313:CDS | 15.0% |
| !!! | CTTCTTTTTATTTATTTTGT+AGG | - | chr8.1:7354715-7354734 | MS.gene073313:intron | 15.0% |
| !!! | TGTTTTTGTTTTTTTATGAT+TGG | - | chr8.1:7352639-7352658 | MS.gene073313:CDS | 15.0% |
| !!! | TTTTATTCATACAGATAATA+TGG | + | chr8.1:7354513-7354532 | None:intergenic | 15.0% |
| !!! | TTTTGTCATATAATCTTTAA+TGG | - | chr8.1:7354452-7354471 | MS.gene073313:intron | 15.0% |
| !!! | TTTTTTATTTGATTTTCTGT+CGG | - | chr8.1:7352775-7352794 | MS.gene073313:CDS | 15.0% |
| !! | AAAATGAAAACTGAAAACAT+TGG | + | chr8.1:7353593-7353612 | None:intergenic | 20.0% |
| !! | AAAATTTGCAATGATTTACT+TGG | + | chr8.1:7353178-7353197 | None:intergenic | 20.0% |
| !! | AATAGAAGATAAGAAACTAA+GGG | - | chr8.1:7353557-7353576 | MS.gene073313:CDS | 20.0% |
| !! | AATTTACATCCTTCTATAAT+TGG | + | chr8.1:7352448-7352467 | None:intergenic | 20.0% |
| !! | ATCCAAAAATAAAATGCAAT+TGG | + | chr8.1:7353009-7353028 | None:intergenic | 20.0% |
| !! | ATTATCCAAATACCATAAAT+TGG | + | chr8.1:7352499-7352518 | None:intergenic | 20.0% |
| !! | CATAACATAAACAAGTTATA+CGG | + | chr8.1:7354656-7354675 | None:intergenic | 20.0% |
| !! | TAAAACTGAATAAATTCCAA+TGG | - | chr8.1:7356351-7356370 | MS.gene073313:intron | 20.0% |
| !! | TAATAGAAGATAAGAAACTA+AGG | - | chr8.1:7353556-7353575 | MS.gene073313:CDS | 20.0% |
| !! | TTAAAACATGTGAGAAAAAA+TGG | + | chr8.1:7352475-7352494 | None:intergenic | 20.0% |
| !! | TTAATCCAATTTATGGTATT+TGG | - | chr8.1:7352491-7352510 | MS.gene073313:CDS | 20.0% |
| !! | TTGATATAAATTATGGAAGT+TGG | + | chr8.1:7353416-7353435 | None:intergenic | 20.0% |
| !! | TTTATATCAAACTATGTTTC+CGG | - | chr8.1:7353426-7353445 | MS.gene073313:CDS | 20.0% |
| !!! | ACATGTTTTAATCCAATTTA+TGG | - | chr8.1:7352484-7352503 | MS.gene073313:CDS | 20.0% |
| !!! | ACATTAAATGATTAACTTGT+TGG | - | chr8.1:7354579-7354598 | MS.gene073313:intron | 20.0% |
| !!! | AGAAATTTGTTTTTCCATTT+GGG | - | chr8.1:7352849-7352868 | MS.gene073313:CDS | 20.0% |
| !!! | ATCCAATTGCATTTTATTTT+TGG | - | chr8.1:7353004-7353023 | MS.gene073313:CDS | 20.0% |
| !!! | TAGAAATTTGTTTTTCCATT+TGG | - | chr8.1:7352848-7352867 | MS.gene073313:CDS | 20.0% |
| ! | AAAAAGAAGCTCATTAATGT+TGG | + | chr8.1:7354704-7354723 | None:intergenic | 25.0% |
| ! | AAGGTTAAGCTAAACAATAA+TGG | - | chr8.1:7353500-7353519 | MS.gene073313:CDS | 25.0% |
| ! | ACTAAAGCTTTCATTCAATT+AGG | + | chr8.1:7354345-7354364 | None:intergenic | 25.0% |
| ! | ACTGAGTAAATAGGAATTTA+TGG | + | chr8.1:7353257-7353276 | None:intergenic | 25.0% |
| ! | ATAAATCTATTTCCAGCATT+TGG | - | chr8.1:7353220-7353239 | MS.gene073313:CDS | 25.0% |
| ! | ATAGAAGATAAGAAACTAAG+GGG | - | chr8.1:7353558-7353577 | MS.gene073313:CDS | 25.0% |
| ! | ATCAAAACAAAGACACTATA+AGG | + | chr8.1:7352425-7352444 | None:intergenic | 25.0% |
| ! | ATTTATCCAGATGACATAAT+GGG | + | chr8.1:7353206-7353225 | None:intergenic | 25.0% |
| ! | CAATTATGATAGAGAGAATA+TGG | + | chr8.1:7353758-7353777 | None:intergenic | 25.0% |
| ! | CTTGTAGAATATAACAACAA+GGG | - | chr8.1:7355624-7355643 | MS.gene073313:intron | 25.0% |
| ! | GAAAACAAATAGATGGATAA+TGG | + | chr8.1:7353365-7353384 | None:intergenic | 25.0% |
| ! | GAAGAAGATATAGAAAATCT+CGG | - | chr8.1:7355963-7355982 | MS.gene073313:CDS | 25.0% |
| ! | GATAATGAGTTAATAGAACT+TGG | - | chr8.1:7352956-7352975 | MS.gene073313:CDS | 25.0% |
| ! | TAAAAAATCTTCAGACTTGA+CGG | - | chr8.1:7354888-7354907 | MS.gene073313:intron | 25.0% |
| ! | TCATGATATTTGAACTCATT+AGG | + | chr8.1:7356149-7356168 | None:intergenic | 25.0% |
| ! | TTATATCAAACTATGTTTCC+GGG | - | chr8.1:7353427-7353446 | MS.gene073313:CDS | 25.0% |
| ! | TTATCAGGTAATAAACTCTT+AGG | + | chr8.1:7355711-7355730 | None:intergenic | 25.0% |
| ! | TTCATAATTCATCAAGTATC+AGG | + | chr8.1:7354609-7354628 | None:intergenic | 25.0% |
| ! | TTTATATGCAGATAGTACAT+GGG | - | chr8.1:7353966-7353985 | MS.gene073313:CDS | 25.0% |
| !! | AATAAACTCTTAGGAGTTTT+TGG | + | chr8.1:7355702-7355721 | None:intergenic | 25.0% |
| !! | ATGGGAACTTTAAAGAATAT+TGG | - | chr8.1:7356551-7356570 | MS.gene073313:intron | 25.0% |
| !! | ATGTTTGAAGCTTTAATGAA+TGG | - | chr8.1:7355072-7355091 | MS.gene073313:intron | 25.0% |
| !! | GCATTTTCAGAAATTTTGAA+AGG | - | chr8.1:7353681-7353700 | MS.gene073313:CDS | 25.0% |
| !! | TAGTACGTCTAAAAATGTTT+TGG | - | chr8.1:7356782-7356801 | MS.gene073313:CDS | 25.0% |
| !! | TGCAGTACTGTTAATTTTAA+TGG | - | chr8.1:7356506-7356525 | MS.gene073313:intron | 25.0% |
| !! | TGGGAACTTTAAAGAATATT+GGG | - | chr8.1:7356552-7356571 | MS.gene073313:intron | 25.0% |
| !! | TGTTTGAAGCTTTAATGAAT+GGG | - | chr8.1:7355073-7355092 | MS.gene073313:intron | 25.0% |
| !! | TTTTAATGTTTGTGTTCTCT+GGG | + | chr8.1:7355533-7355552 | None:intergenic | 25.0% |
| !! | TTTTATATTCCTAGAAAGTG+TGG | + | chr8.1:7356336-7356355 | None:intergenic | 25.0% |
| !! | TTTTTAATGTTTGTGTTCTC+TGG | + | chr8.1:7355534-7355553 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTCCTTCTAACT+CGG | - | chr8.1:7354233-7354252 | MS.gene073313:CDS | 25.0% |
| !!! | GCTAGATTTGTTTTCAAAAA+CGG | + | chr8.1:7353663-7353682 | None:intergenic | 25.0% |
| !!! | TGAGACGGATTTTATTATTA+TGG | - | chr8.1:7354097-7354116 | MS.gene073313:CDS | 25.0% |
| !!! | TGTTTTGATCCAATTATAGA+AGG | - | chr8.1:7352436-7352455 | MS.gene073313:intron | 25.0% |
| !!! | TTCGTTTTAAATTGCTAACA+AGG | + | chr8.1:7353804-7353823 | None:intergenic | 25.0% |
| AACAATCAAGAGTGGTAAAA+AGG | - | chr8.1:7355881-7355900 | MS.gene073313:intron | 30.0% | |
| ACTTTGATCGTTATACTTGT+TGG | + | chr8.1:7356453-7356472 | None:intergenic | 30.0% | |
| AGGAATTTATGGCAGTATAA+CGG | + | chr8.1:7353246-7353265 | None:intergenic | 30.0% | |
| ATTACCTGATAATAGCTACT+GGG | - | chr8.1:7355719-7355738 | MS.gene073313:intron | 30.0% | |
| CTTTATATGCAGATAGTACA+TGG | - | chr8.1:7353965-7353984 | MS.gene073313:CDS | 30.0% | |
| GAAAAATAGATGGACAGAAA+AGG | - | chr8.1:7355815-7355834 | MS.gene073313:intron | 30.0% | |
| GATTTATCCAGATGACATAA+TGG | + | chr8.1:7353207-7353226 | None:intergenic | 30.0% | |
| GCTTGTAGAATATAACAACA+AGG | - | chr8.1:7355623-7355642 | MS.gene073313:intron | 30.0% | |
| GTTTCAGAGAAGTTATGTTA+AGG | - | chr8.1:7356686-7356705 | MS.gene073313:CDS | 30.0% | |
| TAAACAAGTTATACGGAATC+TGG | + | chr8.1:7354649-7354668 | None:intergenic | 30.0% | |
| TAAATACGTTTGCTCACTTT+GGG | - | chr8.1:7354205-7354224 | MS.gene073313:CDS | 30.0% | |
| TAACTCATTATCTCTCAAGA+TGG | + | chr8.1:7352948-7352967 | None:intergenic | 30.0% | |
| TAATGATTCCACAGGAAATT+CGG | - | chr8.1:7356310-7356329 | MS.gene073313:intron | 30.0% | |
| TATTACCTGATAATAGCTAC+TGG | - | chr8.1:7355718-7355737 | MS.gene073313:intron | 30.0% | |
| TCTGACATAAGCAACAATTA+CGG | - | chr8.1:7356056-7356075 | MS.gene073313:intron | 30.0% | |
| TGAATAAATTCCAATGGCTT+TGG | - | chr8.1:7356357-7356376 | MS.gene073313:intron | 30.0% | |
| TGTTTCGATCGTATAGATTT+GGG | - | chr8.1:7352886-7352905 | MS.gene073313:CDS | 30.0% | |
| TTAAATTGCTAACAAGGAGA+TGG | + | chr8.1:7353798-7353817 | None:intergenic | 30.0% | |
| TTATATGCAGATAGTACATG+GGG | - | chr8.1:7353967-7353986 | MS.gene073313:CDS | 30.0% | |
| TTCCATCTCAGAAAAATAGA+TGG | - | chr8.1:7355805-7355824 | MS.gene073313:intron | 30.0% | |
| TTGCTCTATACTGAGTAAAT+AGG | + | chr8.1:7353266-7353285 | None:intergenic | 30.0% | |
| TTGTTTCGATCGTATAGATT+TGG | - | chr8.1:7352885-7352904 | MS.gene073313:CDS | 30.0% | |
| TTTATCCAGATGACATAATG+GGG | + | chr8.1:7353205-7353224 | None:intergenic | 30.0% | |
| TTTGTTAGAAGATCTATCCA+AGG | - | chr8.1:7355929-7355948 | MS.gene073313:CDS | 30.0% | |
| ! | AACAAATAGATGGATAATGG+AGG | + | chr8.1:7353362-7353381 | None:intergenic | 30.0% |
| ! | ATGTTTTCAGAAAGTAAACG+CGG | - | chr8.1:7353850-7353869 | MS.gene073313:CDS | 30.0% |
| ! | CATTTTACAGACAGATTTGA+TGG | - | chr8.1:7354823-7354842 | MS.gene073313:intron | 30.0% |
| ! | GTTTGAAGCTTTAATGAATG+GGG | - | chr8.1:7355074-7355093 | MS.gene073313:intron | 30.0% |
| ! | TTAATGTTTCTAATCCTGTC+AGG | - | chr8.1:7353053-7353072 | MS.gene073313:CDS | 30.0% |
| ! | TTACTTGGATTTTGTGAAAG+CGG | + | chr8.1:7353163-7353182 | None:intergenic | 30.0% |
| !! | AAAGTTCAGAGCTTTATTGA+TGG | - | chr8.1:7352540-7352559 | MS.gene073313:CDS | 30.0% |
| !! | AAGTTCAGAGCTTTATTGAT+GGG | - | chr8.1:7352541-7352560 | MS.gene073313:CDS | 30.0% |
| !! | ATTTGTTTTCAAAAACGGTG+AGG | + | chr8.1:7353658-7353677 | None:intergenic | 30.0% |
| !!! | AAAAATGTTTTGGTTGGCAA+AGG | - | chr8.1:7356792-7356811 | MS.gene073313:CDS | 30.0% |
| !!! | AAAATGTTTTGGTTGGCAAA+GGG | - | chr8.1:7356793-7356812 | MS.gene073313:CDS | 30.0% |
| !!! | ACGTCTAAAAATGTTTTGGT+TGG | - | chr8.1:7356786-7356805 | MS.gene073313:CDS | 30.0% |
| AAAACGGTGAGGAAAATACT+TGG | + | chr8.1:7353647-7353666 | None:intergenic | 35.0% | |
| AAAAGCGAACCAATTAAGCA+CGG | + | chr8.1:7354266-7354285 | None:intergenic | 35.0% | |
| AACAAAGACACTATAAGGCA+TGG | + | chr8.1:7352420-7352439 | None:intergenic | 35.0% | |
| AACAACACTCAAATCCCAAA+TGG | + | chr8.1:7352866-7352885 | None:intergenic | 35.0% | |
| AACACAATGGTCTGTATCTT+AGG | + | chr8.1:7354973-7354992 | None:intergenic | 35.0% | |
| AAGATCTATCCAAGGAACTT+GGG | - | chr8.1:7355937-7355956 | MS.gene073313:CDS | 35.0% | |
| AATGGCAATCAACAAATGCT+TGG | - | chr8.1:7353518-7353537 | MS.gene073313:CDS | 35.0% | |
| AATTATGAACCGCCTTTCTT+GGG | - | chr8.1:7354620-7354639 | MS.gene073313:intron | 35.0% | |
| ACCAATAATAGCAAGGAACT+TGG | + | chr8.1:7352586-7352605 | None:intergenic | 35.0% | |
| ACTTGGAGAACATAAAGCAA+AGG | + | chr8.1:7354760-7354779 | None:intergenic | 35.0% | |
| ACTTTCATCCTTTGTAACGT+GGG | + | chr8.1:7353113-7353132 | None:intergenic | 35.0% | |
| ATCGTATAGATTTGGGCATT+TGG | - | chr8.1:7352893-7352912 | MS.gene073313:CDS | 35.0% | |
| ATTTATCTCAGCTATTGCTG+TGG | - | chr8.1:7355431-7355450 | MS.gene073313:intron | 35.0% | |
| CAAAGTGAGCAAACGTATTT+AGG | + | chr8.1:7354206-7354225 | None:intergenic | 35.0% | |
| CCAATAATAGCAAGGAACTT+GGG | + | chr8.1:7352585-7352604 | None:intergenic | 35.0% | |
| CGTTTATTCGATGATCTTAG+AGG | - | chr8.1:7352277-7352296 | MS.gene073313:CDS | 35.0% | |
| CTAAATACGTTTGCTCACTT+TGG | - | chr8.1:7354204-7354223 | MS.gene073313:CDS | 35.0% | |
| GAAGTTGAAGATGAAGAAGA+TGG | + | chr8.1:7352334-7352353 | None:intergenic | 35.0% | |
| GCAACTATTTCCAGACAAAA+GGG | - | chr8.1:7354061-7354080 | MS.gene073313:CDS | 35.0% | |
| GCTGAAGAACTTAAACAAGA+TGG | - | chr8.1:7355768-7355787 | MS.gene073313:intron | 35.0% | |
| GCTTATCACCAATAATAGCA+AGG | + | chr8.1:7352593-7352612 | None:intergenic | 35.0% | |
| GTATCATTTATTGTCGCATG+TGG | - | chr8.1:7355194-7355213 | MS.gene073313:intron | 35.0% | |
| TAATCATTCTGTAGCAGTTG+AGG | - | chr8.1:7356013-7356032 | MS.gene073313:intron | 35.0% | |
| TACTTTCATCCTTTGTAACG+TGG | + | chr8.1:7353114-7353133 | None:intergenic | 35.0% | |
| TAGTTCACCAAATCTTGTCA+TGG | - | chr8.1:7353132-7353151 | MS.gene073313:CDS | 35.0% | |
| TATTGTGTGTAACTGTTGCT+TGG | + | chr8.1:7354170-7354189 | None:intergenic | 35.0% | |
| TCATACAGATAATATGGCAG+TGG | + | chr8.1:7354507-7354526 | None:intergenic | 35.0% | |
| TCATCGAATAAACGATTCTC+CGG | + | chr8.1:7352271-7352290 | None:intergenic | 35.0% | |
| TCTGGTCGAAAACAAATAGA+TGG | + | chr8.1:7353372-7353391 | None:intergenic | 35.0% | |
| TGGAAGTTTGGTCGTAATAA+TGG | - | chr8.1:7356377-7356396 | MS.gene073313:intron | 35.0% | |
| TGTTGCTAAGTGATGCTTAT+GGG | - | chr8.1:7354989-7355008 | MS.gene073313:CDS | 35.0% | |
| TTAAAGTTCCCATCACATTC+TGG | + | chr8.1:7356544-7356563 | None:intergenic | 35.0% | |
| TTACCTTCTTCGAGAATTAG+CGG | + | chr8.1:7352380-7352399 | None:intergenic | 35.0% | |
| TTGTTATATTCTACAAGCGC+AGG | + | chr8.1:7355621-7355640 | None:intergenic | 35.0% | |
| ! | AAAGTTTTCGAACTTCTGCA+AGG | + | chr8.1:7354795-7354814 | None:intergenic | 35.0% |
| ! | CATTTTATTGTCACCACAGA+TGG | + | chr8.1:7353943-7353962 | None:intergenic | 35.0% |
| ! | GTGCTAAGGCTAGTTATATA+GGG | + | chr8.1:7354313-7354332 | None:intergenic | 35.0% |
| ! | GTTTAAGTTCTTCAGCACTA+TGG | + | chr8.1:7355764-7355783 | None:intergenic | 35.0% |
| ! | TAAAATGGAAAAGCATGCAG+AGG | - | chr8.1:7355362-7355381 | MS.gene073313:intron | 35.0% |
| ! | TACTTGGATTTTGTGAAAGC+GGG | + | chr8.1:7353162-7353181 | None:intergenic | 35.0% |
| ! | TCTTGCACTTTTCATGAGAT+AGG | - | chr8.1:7353319-7353338 | MS.gene073313:CDS | 35.0% |
| ! | TGTGCTAAGGCTAGTTATAT+AGG | + | chr8.1:7354314-7354333 | None:intergenic | 35.0% |
| !! | ACAACACAGACACTTGTTTT+AGG | - | chr8.1:7355385-7355404 | MS.gene073313:intron | 35.0% |
| !! | GTCCATCTATTTTTCTGAGA+TGG | + | chr8.1:7355810-7355829 | None:intergenic | 35.0% |
| !! | TTATGTTCTCCAAGTTGATG+TGG | - | chr8.1:7354765-7354784 | MS.gene073313:intron | 35.0% |
| AAATCCGTCTCAATATGCCT+TGG | + | chr8.1:7354089-7354108 | None:intergenic | 40.0% | |
| ACCTTGTCTATAACCACACT+CGG | + | chr8.1:7354136-7354155 | None:intergenic | 40.0% | |
| ACTCATTAGGAGAACTAGCT+AGG | + | chr8.1:7356136-7356155 | None:intergenic | 40.0% | |
| ACTTAATGCAAGAGTCTGCA+AGG | + | chr8.1:7355577-7355596 | None:intergenic | 40.0% | |
| AGAAGGTAAGCCAATTCACT+TGG | - | chr8.1:7352391-7352410 | MS.gene073313:intron | 40.0% | |
| AGATGTCTTAGCAGAAACAC+CGG | - | chr8.1:7356089-7356108 | MS.gene073313:intron | 40.0% | |
| AGCAAACGTATTTAGGAGGA+AGG | + | chr8.1:7354199-7354218 | None:intergenic | 40.0% | |
| AGCATCACTTAGCAACACAA+TGG | + | chr8.1:7354986-7355005 | None:intergenic | 40.0% | |
| AGGATCTTTCATTCATCTCG+CGG | - | chr8.1:7355405-7355424 | MS.gene073313:intron | 40.0% | |
| AGTGAGCAAACGTATTTAGG+AGG | + | chr8.1:7354203-7354222 | None:intergenic | 40.0% | |
| ATAGCTACTGGGAAGAAAAG+TGG | - | chr8.1:7355730-7355749 | MS.gene073313:intron | 40.0% | |
| ATGATCTTAGAGGTTTGCAG+TGG | - | chr8.1:7352287-7352306 | MS.gene073313:CDS | 40.0% | |
| ATTGGAAGAGGTGAATCGAT+GGG | + | chr8.1:7356245-7356264 | None:intergenic | 40.0% | |
| CCTTTCAATAAAGCAGATGC+AGG | + | chr8.1:7354544-7354563 | None:intergenic | 40.0% | |
| CTACAGAATGATTATCCTGC+TGG | + | chr8.1:7356007-7356026 | None:intergenic | 40.0% | |
| CTCTCAACAAGCACAATACA+TGG | - | chr8.1:7352685-7352704 | MS.gene073313:CDS | 40.0% | |
| CTCTCTACACTATTGGAAAC+GGG | - | chr8.1:7354416-7354435 | MS.gene073313:intron | 40.0% | |
| CTCTTGATTGTTGACGAAGA+TGG | + | chr8.1:7355873-7355892 | None:intergenic | 40.0% | |
| CTGGGAAGCTTAATAATCTC+TGG | + | chr8.1:7355515-7355534 | None:intergenic | 40.0% | |
| CTTTCATCCTTTGTAACGTG+GGG | + | chr8.1:7353112-7353131 | None:intergenic | 40.0% | |
| GAAGATCTATCCAAGGAACT+TGG | - | chr8.1:7355936-7355955 | MS.gene073313:CDS | 40.0% | |
| GAATTATGAACCGCCTTTCT+TGG | - | chr8.1:7354619-7354638 | MS.gene073313:intron | 40.0% | |
| GCCATTGTCAAAAACAGCAT+CGG | - | chr8.1:7352204-7352223 | MS.gene073313:CDS | 40.0% | |
| GCTCTCTACACTATTGGAAA+CGG | - | chr8.1:7354415-7354434 | MS.gene073313:intron | 40.0% | |
| GGAAATAGTTGCCATGTTCT+GGG | + | chr8.1:7354053-7354072 | None:intergenic | 40.0% | |
| GGCAACTATTTCCAGACAAA+AGG | - | chr8.1:7354060-7354079 | MS.gene073313:CDS | 40.0% | |
| GGTAAGTAACCGTGCTTAAT+TGG | - | chr8.1:7354254-7354273 | MS.gene073313:CDS | 40.0% | |
| GTTGCTAAGTGATGCTTATG+GGG | - | chr8.1:7354990-7355009 | MS.gene073313:CDS | 40.0% | |
| GTTGGCACTAAATAAGCATG+TGG | + | chr8.1:7353468-7353487 | None:intergenic | 40.0% | |
| TACCTGAATATGCTCAAGCA+TGG | + | chr8.1:7356582-7356601 | None:intergenic | 40.0% | |
| TATAGCCATCTCGTTGATCT+CGG | - | chr8.1:7355228-7355247 | MS.gene073313:intron | 40.0% | |
| TATCAAACTATGTTTCCGGG+AGG | - | chr8.1:7353430-7353449 | MS.gene073313:CDS | 40.0% | |
| TCACGTTTATACCCAGAACA+TGG | - | chr8.1:7354039-7354058 | MS.gene073313:CDS | 40.0% | |
| TCATGAAACATTATGCCAGC+AGG | - | chr8.1:7355989-7356008 | MS.gene073313:intron | 40.0% | |
| TCGGTTTCGTCTTTAATCTC+CGG | - | chr8.1:7352223-7352242 | MS.gene073313:CDS | 40.0% | |
| TCTCATGCTCTCTACACTAT+TGG | - | chr8.1:7354409-7354428 | MS.gene073313:intron | 40.0% | |
| TCTCTTATTCTCCTGTTGCT+GGG | - | chr8.1:7355127-7355146 | MS.gene073313:intron | 40.0% | |
| TCTTCCCAGTAGCTATTATC+AGG | + | chr8.1:7355726-7355745 | None:intergenic | 40.0% | |
| TCTTCGTCAACAATCAAGAG+TGG | - | chr8.1:7355873-7355892 | MS.gene073313:intron | 40.0% | |
| TGAACCTGATTCACATGCAA+TGG | + | chr8.1:7355679-7355698 | None:intergenic | 40.0% | |
| TGCAGTGGCGTATAAATCTT+GGG | - | chr8.1:7352302-7352321 | MS.gene073313:CDS | 40.0% | |
| TGGAAATAGTTGCCATGTTC+TGG | + | chr8.1:7354054-7354073 | None:intergenic | 40.0% | |
| TGGTATCACTAAATTCCTCC+CGG | + | chr8.1:7353448-7353467 | None:intergenic | 40.0% | |
| TTACACCCCATTATGTCATC+TGG | - | chr8.1:7353197-7353216 | MS.gene073313:CDS | 40.0% | |
| TTCTCTTATTCTCCTGTTGC+TGG | - | chr8.1:7355126-7355145 | MS.gene073313:intron | 40.0% | |
| TTGCAGTGGCGTATAAATCT+TGG | - | chr8.1:7352301-7352320 | MS.gene073313:CDS | 40.0% | |
| ! | CCTGCATCTGCTTTATTGAA+AGG | - | chr8.1:7354541-7354560 | MS.gene073313:intron | 40.0% |
| ! | GCTTAATAATCTCTGGAGAC+AGG | + | chr8.1:7355508-7355527 | None:intergenic | 40.0% |
| ! | GTGTTGCTAAGTGATGCTTA+TGG | - | chr8.1:7354988-7355007 | MS.gene073313:CDS | 40.0% |
| ! | TCAGGTATGCTAGTTTGAGA+GGG | - | chr8.1:7353071-7353090 | MS.gene073313:CDS | 40.0% |
| !! | AACCTTTTGTCTGAGATGTG+AGG | - | chr8.1:7356861-7356880 | MS.gene073313:CDS | 40.0% |
| !! | CCCAAGTTCCTTGCTATTAT+TGG | - | chr8.1:7352582-7352601 | MS.gene073313:CDS | 40.0% |
| !! | CTTCTCTGAAACGTAAGTTC+AGG | + | chr8.1:7356678-7356697 | None:intergenic | 40.0% |
| !! | GAAAAGAGTACTTGCTTCTG+AGG | - | chr8.1:7356415-7356434 | MS.gene073313:intron | 40.0% |
| !! | GCGTTGATTTATTCGTCATG+TGG | - | chr8.1:7352915-7352934 | MS.gene073313:CDS | 40.0% |
| !! | TTCCAATGGCTTTGGAAGTT+TGG | - | chr8.1:7356365-7356384 | MS.gene073313:intron | 40.0% |
| !!! | ACCGATGCTGTTTTTGACAA+TGG | + | chr8.1:7352208-7352227 | None:intergenic | 40.0% |
| !!! | CGCTGGTTGAGAGTTTTATT+TGG | - | chr8.1:7355276-7355295 | MS.gene073313:intron | 40.0% |
| !!! | CTTTTTTCACAATGCAGAGC+TGG | - | chr8.1:7353993-7354012 | MS.gene073313:CDS | 40.0% |
| !!! | GATGCTGTTTTTGACAATGG+CGG | + | chr8.1:7352205-7352224 | None:intergenic | 40.0% |
| AACCTTCTTGTGAGTGCAGT+TGG | + | chr8.1:7353486-7353505 | None:intergenic | 45.0% | |
| AAGATCACCAGCTGTAGAAG+AGG | + | chr8.1:7356486-7356505 | None:intergenic | 45.0% | |
| AATAAACGATTCTCCGGCAC+CGG | + | chr8.1:7352265-7352284 | None:intergenic | 45.0% | |
| ACCACCATTGCATGTGAATC+AGG | - | chr8.1:7355672-7355691 | MS.gene073313:intron | 45.0% | |
| ACCTGATTCACATGCAATGG+TGG | + | chr8.1:7355676-7355695 | None:intergenic | 45.0% | |
| AGTGATGCTTATGGGGTTGA+AGG | - | chr8.1:7354997-7355016 | MS.gene073313:CDS | 45.0% | |
| ATAGCCATCTCGTTGATCTC+GGG | - | chr8.1:7355229-7355248 | MS.gene073313:intron | 45.0% | |
| ATCTAACCCTCTCTTTCCGT+TGG | - | chr8.1:7353915-7353934 | MS.gene073313:CDS | 45.0% | |
| CCTTGTCTATAACCACACTC+GGG | + | chr8.1:7354135-7354154 | None:intergenic | 45.0% | |
| CGGTTACTTACCGAGTTAGA+AGG | + | chr8.1:7354246-7354265 | None:intergenic | 45.0% | |
| CTCAAACTAGCATACCTGAC+AGG | + | chr8.1:7353070-7353089 | None:intergenic | 45.0% | |
| CTCTCAGGATGATCAGAGAT+TGG | + | chr8.1:7356263-7356282 | None:intergenic | 45.0% | |
| GAAATTCGGCCACACTTTCT+AGG | - | chr8.1:7356324-7356343 | MS.gene073313:intron | 45.0% | |
| GACCAAACTTCCAAAGCCAT+TGG | + | chr8.1:7356370-7356389 | None:intergenic | 45.0% | |
| GATTGGAAGAGGTGAATCGA+TGG | + | chr8.1:7356246-7356265 | None:intergenic | 45.0% | |
| GCAGAAGCTTCAATTACAGG+TGG | + | chr8.1:7355168-7355187 | None:intergenic | 45.0% | |
| GCAGCAGAAGCTTCAATTAC+AGG | + | chr8.1:7355171-7355190 | None:intergenic | 45.0% | |
| GCAGTGGCGTATAAATCTTG+GGG | - | chr8.1:7352303-7352322 | MS.gene073313:CDS | 45.0% | |
| GCTTTAATGAATGGGGCTCA+CGG | - | chr8.1:7355081-7355100 | MS.gene073313:intron | 45.0% | |
| GGACTGTGTGTTTGTGTAAC+AGG | - | chr8.1:7356707-7356726 | MS.gene073313:CDS | 45.0% | |
| GGATGATCAGAGATTGGAAG+AGG | + | chr8.1:7356257-7356276 | None:intergenic | 45.0% | |
| GGCATGGTTACCAAGTGAAT+TGG | + | chr8.1:7352404-7352423 | None:intergenic | 45.0% | |
| GGGTTGTCCATGACAAGATT+TGG | + | chr8.1:7353142-7353161 | None:intergenic | 45.0% | |
| GTCCATGCTTGAGCATATTC+AGG | - | chr8.1:7356577-7356596 | MS.gene073313:intron | 45.0% | |
| TACAGGTGGCAAACCAGTAT+GGG | + | chr8.1:7355154-7355173 | None:intergenic | 45.0% | |
| TATGGGGTTGAAGGTGAACT+GGG | - | chr8.1:7355006-7355025 | MS.gene073313:CDS | 45.0% | |
| TCTGCTGACCAGAATGTGAT+GGG | - | chr8.1:7356533-7356552 | MS.gene073313:intron | 45.0% | |
| TCTGCTTTCCAACAAGAGTG+TGG | - | chr8.1:7356738-7356757 | MS.gene073313:CDS | 45.0% | |
| TGACAACCTCTTGATCGTCT+GGG | - | chr8.1:7355314-7355333 | MS.gene073313:intron | 45.0% | |
| TTACAGGTGGCAAACCAGTA+TGG | + | chr8.1:7355155-7355174 | None:intergenic | 45.0% | |
| TTAGGCGTGCTAATGTGCTA+AGG | + | chr8.1:7354327-7354346 | None:intergenic | 45.0% | |
| TTATGGGGTTGAAGGTGAAC+TGG | - | chr8.1:7355005-7355024 | MS.gene073313:CDS | 45.0% | |
| TTCTGCTGACCAGAATGTGA+TGG | - | chr8.1:7356532-7356551 | MS.gene073313:intron | 45.0% | |
| TTCTTCTGACCCAAGTTCCT+TGG | + | chr8.1:7355949-7355968 | None:intergenic | 45.0% | |
| TTGACAACCTCTTGATCGTC+TGG | - | chr8.1:7355313-7355332 | MS.gene073313:intron | 45.0% | |
| TTTCATCCCAGACGATCAAG+AGG | + | chr8.1:7355323-7355342 | None:intergenic | 45.0% | |
| ! | GAAATCGGTTCTCACGGAAA+AGG | - | chr8.1:7354916-7354935 | MS.gene073313:CDS | 45.0% |
| ! | GACTTGACGGATGACGAAAT+CGG | - | chr8.1:7354901-7354920 | MS.gene073313:intron | 45.0% |
| ! | GATGACGAAATCGGTTCTCA+CGG | - | chr8.1:7354910-7354929 | MS.gene073313:CDS | 45.0% |
| ! | GTCAGGTATGCTAGTTTGAG+AGG | - | chr8.1:7353070-7353089 | MS.gene073313:CDS | 45.0% |
| ! | GTGTAACTGTTGCTTGGCTT+AGG | + | chr8.1:7354164-7354183 | None:intergenic | 45.0% |
| ! | TACGTTTGCTCACTTTGGGA+TGG | - | chr8.1:7354209-7354228 | MS.gene073313:CDS | 45.0% |
| ! | TTCCAACAAGAGTGTGGTCA+GGG | - | chr8.1:7356744-7356763 | MS.gene073313:CDS | 45.0% |
| ! | TTTCCAACAAGAGTGTGGTC+AGG | - | chr8.1:7356743-7356762 | MS.gene073313:CDS | 45.0% |
| AAGCTCCTTGAGAGCTGACA+TGG | + | chr8.1:7356829-7356848 | None:intergenic | 50.0% | |
| AAGGAGATGGAAGACTCGTG+TGG | + | chr8.1:7353785-7353804 | None:intergenic | 50.0% | |
| AAGTGTGGCCGAATTTCCTG+TGG | + | chr8.1:7356321-7356340 | None:intergenic | 50.0% | |
| AATCTCCGGCACCATTTCTC+AGG | - | chr8.1:7352237-7352256 | MS.gene073313:CDS | 50.0% | |
| ACAGCTTCCTCTTCTACAGC+TGG | - | chr8.1:7356476-7356495 | MS.gene073313:intron | 50.0% | |
| ATCTGGAAGCCCAAGAAAGG+CGG | + | chr8.1:7354632-7354651 | None:intergenic | 50.0% | |
| ATGGAGCCAACGGAAAGAGA+GGG | + | chr8.1:7353924-7353943 | None:intergenic | 50.0% | |
| CACAGTACTTTGCTCTACGC+TGG | - | chr8.1:7355259-7355278 | MS.gene073313:intron | 50.0% | |
| CCACCGCTAATTCTCGAAGA+AGG | - | chr8.1:7352374-7352393 | MS.gene073313:intron | 50.0% | |
| CCCGAGTGTGGTTATAGACA+AGG | - | chr8.1:7354132-7354151 | MS.gene073313:CDS | 50.0% | |
| CCTTCTTCGAGAATTAGCGG+TGG | + | chr8.1:7352377-7352396 | None:intergenic | 50.0% | |
| GAGGCAGAGCAACAAGATGA+TGG | - | chr8.1:7356032-7356051 | MS.gene073313:intron | 50.0% | |
| GCAGTATAACGGCCAAATGC+TGG | + | chr8.1:7353235-7353254 | None:intergenic | 50.0% | |
| GGAATCTGGAAGCCCAAGAA+AGG | + | chr8.1:7354635-7354654 | None:intergenic | 50.0% | |
| GGCACGACGAAGATCATCAA+CGG | + | chr8.1:7352356-7352375 | None:intergenic | 50.0% | |
| GGGCGCAATAATGATTCCAC+AGG | - | chr8.1:7356302-7356321 | MS.gene073313:intron | 50.0% | |
| GGTGCCAAGGCATATTGAGA+CGG | - | chr8.1:7354082-7354101 | MS.gene073313:CDS | 50.0% | |
| GGTTGATCCCCACGTTACAA+AGG | - | chr8.1:7353102-7353121 | MS.gene073313:CDS | 50.0% | |
| GTGTGGTCAGGGAACTTCAT+TGG | - | chr8.1:7356755-7356774 | MS.gene073313:CDS | 50.0% | |
| TACTGCCATGTCAGCTCTCA+AGG | - | chr8.1:7356821-7356840 | MS.gene073313:CDS | 50.0% | |
| TAGCCATCTCGTTGATCTCG+GGG | - | chr8.1:7355230-7355249 | MS.gene073313:intron | 50.0% | |
| TCCTGAGAGCAACCTATCTC+CGG | - | chr8.1:7356274-7356293 | MS.gene073313:intron | 50.0% | |
| TGCCAACTGCACTCACAAGA+AGG | - | chr8.1:7353481-7353500 | MS.gene073313:CDS | 50.0% | |
| TGTCTTAGACATCCCGAGTG+TGG | - | chr8.1:7354120-7354139 | MS.gene073313:CDS | 50.0% | |
| TTCACAATGCAGAGCTGGAG+AGG | - | chr8.1:7353998-7354017 | MS.gene073313:CDS | 50.0% | |
| TTCCCTGACCACACTCTTGT+TGG | + | chr8.1:7356749-7356768 | None:intergenic | 50.0% | |
| TTGTAACGTGGGGATCAACC+AGG | + | chr8.1:7353102-7353121 | None:intergenic | 50.0% | |
| ! | AATCTCTGGAGACAGGTCGT+AGG | + | chr8.1:7355501-7355520 | None:intergenic | 50.0% |
| ! | GAATGAGTTTTCCTCGCTGC+CGG | + | chr8.1:7356111-7356130 | None:intergenic | 50.0% |
| ! | GGTATGCTAGTTTGAGAGGG+CGG | - | chr8.1:7353074-7353093 | MS.gene073313:CDS | 50.0% |
| !! | CAGCGTAGAGCAAAGTACTG+TGG | + | chr8.1:7355261-7355280 | None:intergenic | 50.0% |
| !! | TTCCAGACAAAAGGGTGCCA+AGG | - | chr8.1:7354069-7354088 | MS.gene073313:CDS | 50.0% |
| !!! | TGTTTTGGTTGGCAAAGGGC+AGG | - | chr8.1:7356797-7356816 | MS.gene073313:CDS | 50.0% |
| ACCGGAGATAGGTTGCTCTC+AGG | + | chr8.1:7356278-7356297 | None:intergenic | 55.0% | |
| CAACCCCGAGATCAACGAGA+TGG | + | chr8.1:7355236-7355255 | None:intergenic | 55.0% | |
| CAATGCAGAGCTGGAGAGGA+TGG | - | chr8.1:7354002-7354021 | MS.gene073313:CDS | 55.0% | |
| CATTTCTCAGGAACCGGTGC+CGG | - | chr8.1:7352249-7352268 | MS.gene073313:CDS | 55.0% | |
| CGGCACCATTTCTCAGGAAC+CGG | - | chr8.1:7352243-7352262 | MS.gene073313:CDS | 55.0% | |
| CGGTTCCTGAGAAATGGTGC+CGG | + | chr8.1:7352245-7352264 | None:intergenic | 55.0% | |
| GATGGAGCCAACGGAAAGAG+AGG | + | chr8.1:7353925-7353944 | None:intergenic | 55.0% | |
| GGCTCACGGTTCAGTTGCAA+TGG | - | chr8.1:7355095-7355114 | MS.gene073313:intron | 55.0% | |
| GTCACCACAGATGGAGCCAA+CGG | + | chr8.1:7353934-7353953 | None:intergenic | 55.0% | |
| TCATTATTGCGCCCTGCCAC+CGG | + | chr8.1:7356296-7356315 | None:intergenic | 55.0% | |
| TGAGAGCAACCTATCTCCGG+TGG | - | chr8.1:7356277-7356296 | MS.gene073313:intron | 55.0% | |
| ! | CAAGGCGCTCCACATCAACT+TGG | + | chr8.1:7354777-7354796 | None:intergenic | 55.0% |
| ! | TGCCTTGGCACCCTTTTGTC+TGG | + | chr8.1:7354074-7354093 | None:intergenic | 55.0% |
| ! | TTCTACAAGCGCAGGTGTCG+AGG | + | chr8.1:7355613-7355632 | None:intergenic | 55.0% |
| !! | AATGGCGGATCCAACAGAGC+CGG | + | chr8.1:7352190-7352209 | None:intergenic | 55.0% |
| !! | CTTTCCGTTGGCTCCATCTG+TGG | - | chr8.1:7353927-7353946 | MS.gene073313:CDS | 55.0% |
| AGCAACCTATCTCCGGTGGC+AGG | - | chr8.1:7356281-7356300 | MS.gene073313:intron | 60.0% | |
| CCAGTATGGGACCCAGCAAC+AGG | + | chr8.1:7355141-7355160 | None:intergenic | 60.0% | |
| CCTGTTGCTGGGTCCCATAC+TGG | - | chr8.1:7355138-7355157 | MS.gene073313:intron | 60.0% | |
| GCAACCTATCTCCGGTGGCA+GGG | - | chr8.1:7356282-7356301 | MS.gene073313:intron | 60.0% | |
| TAGCAGAAACACCGGCAGCG+AGG | - | chr8.1:7356097-7356116 | MS.gene073313:intron | 60.0% | |
| TAGTTTGAGAGGGCGGCTCC+TGG | - | chr8.1:7353081-7353100 | MS.gene073313:CDS | 60.0% | |
| TGCAGAGCTGGAGAGGATGG+TGG | - | chr8.1:7354005-7354024 | MS.gene073313:CDS | 60.0% | |
| !! | CGGCACCGGTTCCTGAGAAA+TGG | + | chr8.1:7352251-7352270 | None:intergenic | 60.0% |
| !! | GCTGGAGAGGATGGTGGATC+AGG | - | chr8.1:7354011-7354030 | MS.gene073313:CDS | 60.0% |
| GGCGGATCCAACAGAGCCGG+TGG | + | chr8.1:7352187-7352206 | None:intergenic | 70.0% | |
| TGCGCCCTGCCACCGGAGAT+AGG | + | chr8.1:7356289-7356308 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7352181 | 7356881 | 7352181 | ID=MS.gene073313 |
| chr8.1 | mRNA | 7352181 | 7356881 | 7352181 | ID=MS.gene073313.t1;Parent=MS.gene073313 |
| chr8.1 | exon | 7356667 | 7356881 | 7356667 | ID=MS.gene073313.t1.exon1;Parent=MS.gene073313.t1 |
| chr8.1 | CDS | 7356667 | 7356881 | 7356667 | ID=cds.MS.gene073313.t1;Parent=MS.gene073313.t1 |
| chr8.1 | exon | 7355884 | 7355987 | 7355884 | ID=MS.gene073313.t1.exon2;Parent=MS.gene073313.t1 |
| chr8.1 | CDS | 7355884 | 7355987 | 7355884 | ID=cds.MS.gene073313.t1;Parent=MS.gene073313.t1 |
| chr8.1 | exon | 7354909 | 7355085 | 7354909 | ID=MS.gene073313.t1.exon3;Parent=MS.gene073313.t1 |
| chr8.1 | CDS | 7354909 | 7355085 | 7354909 | ID=cds.MS.gene073313.t1;Parent=MS.gene073313.t1 |
| chr8.1 | exon | 7352464 | 7354325 | 7352464 | ID=MS.gene073313.t1.exon4;Parent=MS.gene073313.t1 |
| chr8.1 | CDS | 7352464 | 7354325 | 7352464 | ID=cds.MS.gene073313.t1;Parent=MS.gene073313.t1 |
| chr8.1 | exon | 7352181 | 7352333 | 7352181 | ID=MS.gene073313.t1.exon5;Parent=MS.gene073313.t1 |
| chr8.1 | CDS | 7352181 | 7352333 | 7352181 | ID=cds.MS.gene073313.t1;Parent=MS.gene073313.t1 |
| Gene Sequence |
| Protein sequence |
