Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073312.t1 | XP_003610057.2 | 97.5 | 835 | 21 | 0 | 1 | 835 | 1 | 835 | 0.00E+00 | 1584.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073312.t1 | Q92609 | 26.8 | 444 | 204 | 9 | 23 | 447 | 71 | 412 | 1.2e-32 | 143.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073312.t1 | G7JUA9 | 97.5 | 835 | 21 | 0 | 1 | 835 | 1 | 835 | 0.0e+00 | 1584.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073312 | MS.gene96351 | PPI |
| MS.gene037046 | MS.gene073312 | PPI |
| MS.gene073312 | MS.gene07739 | PPI |
| MS.gene55117 | MS.gene073312 | PPI |
| MS.gene073312 | MS.gene012347 | PPI |
| MS.gene96351 | MS.gene073312 | PPI |
| MS.gene073313 | MS.gene073312 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073312.t1 | MTR_4g127450 | 97.485 | 835 | 21 | 0 | 1 | 835 | 1 | 835 | 0.0 | 1677 |
| MS.gene073312.t1 | MTR_4g127450 | 97.339 | 714 | 19 | 0 | 122 | 835 | 1 | 714 | 0.0 | 1434 |
| MS.gene073312.t1 | MTR_4g127450 | 97.309 | 669 | 18 | 0 | 167 | 835 | 1 | 669 | 0.0 | 1333 |
| MS.gene073312.t1 | MTR_2g037930 | 64.278 | 879 | 259 | 11 | 1 | 835 | 1 | 868 | 0.0 | 1051 |
| MS.gene073312.t1 | MTR_3g083840 | 26.601 | 203 | 111 | 7 | 38 | 209 | 112 | 307 | 3.50e-11 | 66.6 |
| MS.gene073312.t1 | MTR_8g085300 | 27.381 | 168 | 93 | 5 | 38 | 181 | 123 | 285 | 3.70e-11 | 66.6 |
| MS.gene073312.t1 | MTR_4g114580 | 28.070 | 171 | 88 | 6 | 38 | 181 | 140 | 302 | 5.86e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073312.t1 | AT4G29950 | 53.747 | 854 | 305 | 24 | 32 | 835 | 14 | 827 | 0.0 | 786 |
| MS.gene073312.t1 | AT4G29950 | 53.071 | 814 | 294 | 23 | 72 | 835 | 44 | 819 | 0.0 | 756 |
| MS.gene073312.t1 | AT2G19240 | 48.792 | 869 | 330 | 28 | 31 | 835 | 22 | 839 | 0.0 | 684 |
| MS.gene073312.t1 | AT2G19240 | 49.367 | 869 | 330 | 27 | 31 | 835 | 22 | 844 | 0.0 | 684 |
| MS.gene073312.t1 | AT4G29950 | 51.081 | 740 | 274 | 23 | 146 | 835 | 1 | 702 | 0.0 | 637 |
| MS.gene073312.t1 | AT5G57210 | 54.476 | 659 | 268 | 13 | 30 | 671 | 25 | 668 | 0.0 | 617 |
| MS.gene073312.t1 | AT5G57210 | 51.197 | 543 | 234 | 12 | 146 | 671 | 1 | 529 | 4.30e-153 | 461 |
Find 172 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCTTATTCTCCTGTTGC+TGG | 0.195760 | 8.1:+5363268 | MS.gene073312:CDS |
| TGGAAATAGTTGCCATGTTC+TGG | 0.229971 | 8.1:-5362193 | None:intergenic |
| ATGGGAACTTTAAAGAATAT+TGG | 0.231802 | 8.1:+5364693 | MS.gene073312:CDS |
| TTTATCAGATAATAGTAAAA+TGG | 0.259709 | 8.1:+5363489 | MS.gene073312:CDS |
| TTCCAATGGCTTTGGAAGTT+TGG | 0.270410 | 8.1:+5364507 | MS.gene073312:CDS |
| GAAATTCGGCCACACTTTCT+AGG | 0.287597 | 8.1:+5364466 | MS.gene073312:CDS |
| AACAATCAAGAGTGGTAAAA+AGG | 0.290842 | 8.1:+5364023 | MS.gene073312:CDS |
| CCTGTTGCTGGGTCCCATAC+TGG | 0.298750 | 8.1:+5363280 | MS.gene073312:CDS |
| TCTTCCCAGTAGCTATTATC+AGG | 0.301549 | 8.1:-5363865 | None:intergenic |
| TGGAAGTTTGGTCGTAATAA+TGG | 0.314220 | 8.1:+5364519 | MS.gene073312:CDS |
| CGTTTATTCGATGATCTTAG+AGG | 0.318032 | 8.1:+5360419 | MS.gene073312:CDS |
| ACCACCATTGCATGTGAATC+AGG | 0.320017 | 8.1:+5363814 | MS.gene073312:CDS |
| TGCAGTGGCGTATAAATCTT+GGG | 0.329188 | 8.1:+5360444 | MS.gene073312:CDS |
| TTAAAGTTCCCATCACATTC+TGG | 0.329403 | 8.1:-5364683 | None:intergenic |
| TGAATAAATTCCAATGGCTT+TGG | 0.340110 | 8.1:+5364499 | MS.gene073312:CDS |
| AACACAATGGTCTGTATCTT+AGG | 0.344300 | 8.1:-5363112 | None:intergenic |
| TTCCCTGACCACACTCTTGT+TGG | 0.349187 | 8.1:-5364888 | None:intergenic |
| TGGGAACTTTAAAGAATATT+GGG | 0.350164 | 8.1:+5364694 | MS.gene073312:CDS |
| TCATGATATTTGAACTCATT+AGG | 0.352589 | 8.1:-5364288 | None:intergenic |
| GCAGCAGAAGCTTCAATTAC+AGG | 0.367492 | 8.1:-5363310 | None:intergenic |
| GTGTTGCTAAGTGATGCTTA+TGG | 0.369479 | 8.1:+5363130 | MS.gene073312:CDS |
| ACTTTGATCGTTATACTTGT+TGG | 0.372163 | 8.1:-5364592 | None:intergenic |
| TGTTGCTAAGTGATGCTTAT+GGG | 0.373836 | 8.1:+5363131 | MS.gene073312:CDS |
| TTGACAACCTCTTGATCGTC+TGG | 0.376659 | 8.1:+5363455 | MS.gene073312:CDS |
| GTCCATGCTTGAGCATATTC+AGG | 0.378528 | 8.1:+5364719 | MS.gene073312:CDS |
| TTATCAGGTAATAAACTCTT+AGG | 0.382184 | 8.1:-5363850 | None:intergenic |
| TTGCAGTGGCGTATAAATCT+TGG | 0.390542 | 8.1:+5360443 | MS.gene073312:CDS |
| TAATGATTCCACAGGAAATT+CGG | 0.392355 | 8.1:+5364452 | MS.gene073312:CDS |
| GTTTAAGTTCTTCAGCACTA+TGG | 0.400618 | 8.1:-5363903 | None:intergenic |
| TTACAGGTGGCAAACCAGTA+TGG | 0.402275 | 8.1:-5363294 | None:intergenic |
| AATCTCCGGCACCATTTCTC+AGG | 0.406744 | 8.1:+5360379 | MS.gene073312:CDS |
| GGCAACTATTTCCAGACAAA+AGG | 0.406937 | 8.1:+5362202 | MS.gene073312:CDS |
| TTCTTCTGACCCAAGTTCCT+TGG | 0.407632 | 8.1:-5364088 | None:intergenic |
| GGGTTGTCCATGACAAGATT+TGG | 0.413427 | 8.1:-5361281 | None:intergenic |
| GCTGGAGAGGATGGTGGATC+AGG | 0.417731 | 8.1:+5362153 | MS.gene073312:CDS |
| CGGCACCATTTCTCAGGAAC+CGG | 0.419436 | 8.1:+5360385 | MS.gene073312:CDS |
| CTTTATATGCAGATAGTACA+TGG | 0.422407 | 8.1:+5362107 | MS.gene073312:intron |
| TATAGCCATCTCGTTGATCT+CGG | 0.425792 | 8.1:+5363370 | MS.gene073312:CDS |
| CTCTTGATTGTTGACGAAGA+TGG | 0.426953 | 8.1:-5364012 | None:intergenic |
| AGCAACCTATCTCCGGTGGC+AGG | 0.427699 | 8.1:+5364423 | MS.gene073312:CDS |
| CTGGGAAGCTTAATAATCTC+TGG | 0.432714 | 8.1:-5363654 | None:intergenic |
| ATAGCCATCTCGTTGATCTC+GGG | 0.436878 | 8.1:+5363371 | MS.gene073312:CDS |
| TCTCTTATTCTCCTGTTGCT+GGG | 0.437137 | 8.1:+5363269 | MS.gene073312:CDS |
| TTATGGGGTTGAAGGTGAAC+TGG | 0.438731 | 8.1:+5363147 | MS.gene073312:CDS |
| GAAGATCTATCCAAGGAACT+TGG | 0.440583 | 8.1:+5364078 | MS.gene073312:CDS |
| CGGCACCGGTTCCTGAGAAA+TGG | 0.440993 | 8.1:-5360390 | None:intergenic |
| AATCATGCCACCGGCTCTGT+TGG | 0.445482 | 8.1:+5360319 | None:intergenic |
| GGAAATAGTTGCCATGTTCT+GGG | 0.450619 | 8.1:-5362192 | None:intergenic |
| CCAGTATGGGACCCAGCAAC+AGG | 0.457235 | 8.1:-5363280 | None:intergenic |
| TATTACCTGATAATAGCTAC+TGG | 0.465123 | 8.1:+5363860 | MS.gene073312:CDS |
| CTCTCAGGATGATCAGAGAT+TGG | 0.467104 | 8.1:-5364402 | None:intergenic |
| TGTTTGAAGCTTTAATGAAT+GGG | 0.467577 | 8.1:+5363215 | MS.gene073312:CDS |
| TGCGCCCTGCCACCGGAGAT+AGG | 0.468340 | 8.1:-5364428 | None:intergenic |
| GAAATCGGTTCTCACGGAAA+AGG | 0.478306 | 8.1:+5363058 | MS.gene073312:CDS |
| GTCTCACAGGAAAGTAGTGT+TGG | 0.483922 | 8.1:+5364315 | MS.gene073312:CDS |
| CAAGGCGCTCCACATCAACT+TGG | 0.486995 | 8.1:-5362916 | None:intergenic |
| GTGTGGTCAGGGAACTTCAT+TGG | 0.489228 | 8.1:+5364897 | MS.gene073312:CDS |
| TCGGTTTCGTCTTTAATCTC+CGG | 0.491898 | 8.1:+5360365 | MS.gene073312:CDS |
| TACTGCCATGTCAGCTCTCA+AGG | 0.492107 | 8.1:+5364963 | MS.gene073312:CDS |
| GACTTGACGGATGACGAAAT+CGG | 0.492393 | 8.1:+5363043 | MS.gene073312:CDS |
| TTTCCAACAAGAGTGTGGTC+AGG | 0.497315 | 8.1:+5364885 | MS.gene073312:CDS |
| TAGTTTGAGAGGGCGGCTCC+TGG | 0.499264 | 8.1:+5361223 | MS.gene073312:CDS |
| AGTGATGCTTATGGGGTTGA+AGG | 0.500001 | 8.1:+5363139 | MS.gene073312:CDS |
| ATGTTTGAAGCTTTAATGAA+TGG | 0.501384 | 8.1:+5363214 | MS.gene073312:CDS |
| AAATTTCATTAATTTCATCA+AGG | 0.506660 | 8.1:-5364350 | None:intergenic |
| ACCGGAGATAGGTTGCTCTC+AGG | 0.509000 | 8.1:-5364417 | None:intergenic |
| TCATTATTGCGCCCTGCCAC+CGG | 0.512914 | 8.1:-5364435 | None:intergenic |
| CTACAGAATGATTATCCTGC+TGG | 0.514134 | 8.1:-5364146 | None:intergenic |
| CATTTCTCAGGAACCGGTGC+CGG | 0.515085 | 8.1:+5360391 | MS.gene073312:CDS |
| GACCAAACTTCCAAAGCCAT+TGG | 0.515271 | 8.1:-5364509 | None:intergenic |
| TTACCTTCTTCGAGAATTAG+CGG | 0.517058 | 8.1:-5360519 | None:intergenic |
| CGTCTCACATCTCAGACAAA+AGG | 0.517629 | 8.1:-5365005 | None:intergenic |
| GCTTAATAATCTCTGGAGAC+AGG | 0.520951 | 8.1:-5363647 | None:intergenic |
| GCTGAAGAACTTAAACAAGA+TGG | 0.522754 | 8.1:+5363910 | MS.gene073312:CDS |
| TCCTGAGAGCAACCTATCTC+CGG | 0.524052 | 8.1:+5364416 | MS.gene073312:CDS |
| CAATGCAGAGCTGGAGAGGA+TGG | 0.530243 | 8.1:+5362144 | MS.gene073312:CDS |
| AAGATCACCAGCTGTAGAAG+AGG | 0.531139 | 8.1:-5364625 | None:intergenic |
| TCTGACATAAGCAACAATTA+CGG | 0.532883 | 8.1:+5364198 | MS.gene073312:CDS |
| TTCACAATGCAGAGCTGGAG+AGG | 0.533828 | 8.1:+5362140 | MS.gene073312:CDS |
| GCAACTATTTCCAGACAAAA+GGG | 0.537102 | 8.1:+5362203 | MS.gene073312:CDS |
| GTCAGGTATGCTAGTTTGAG+AGG | 0.540089 | 8.1:+5361212 | MS.gene073312:intron |
| ATAGCTACTGGGAAGAAAAG+TGG | 0.540693 | 8.1:+5363872 | MS.gene073312:CDS |
| TTATGTTCTCCAAGTTGATG+TGG | 0.541208 | 8.1:+5362907 | MS.gene073312:CDS |
| GTATCATTTATTGTCGCATG+TGG | 0.542626 | 8.1:+5363336 | MS.gene073312:CDS |
| AAGCTCCTTGAGAGCTGACA+TGG | 0.543178 | 8.1:-5364968 | None:intergenic |
| TTGTTATATTCTACAAGCGC+AGG | 0.545602 | 8.1:-5363760 | None:intergenic |
| AATAAACGATTCTCCGGCAC+CGG | 0.546739 | 8.1:-5360404 | None:intergenic |
| TCATGAAACATTATGCCAGC+AGG | 0.547111 | 8.1:+5364131 | MS.gene073312:CDS |
| ACCTTGTCTATAACCACACT+CGG | 0.548812 | 8.1:-5362275 | None:intergenic |
| AATTTCATTAATTTCATCAA+GGG | 0.549080 | 8.1:-5364349 | None:intergenic |
| TCATCGAATAAACGATTCTC+CGG | 0.551047 | 8.1:-5360410 | None:intergenic |
| TACAGGTGGCAAACCAGTAT+GGG | 0.551405 | 8.1:-5363293 | None:intergenic |
| TTCCAACAAGAGTGTGGTCA+GGG | 0.551719 | 8.1:+5364886 | MS.gene073312:CDS |
| GAAGAAGATATAGAAAATCT+CGG | 0.552372 | 8.1:+5364105 | MS.gene073312:CDS |
| GAAGTTGAAGATGAAGAAGA+TGG | 0.552384 | 8.1:-5360473 | None:intergenic |
| GGATGATCAGAGATTGGAAG+AGG | 0.553620 | 8.1:-5364396 | None:intergenic |
| ATATCATGAAAATGTCTCAC+AGG | 0.553655 | 8.1:+5364302 | MS.gene073312:CDS |
| ACAGCTTCCTCTTCTACAGC+TGG | 0.554308 | 8.1:+5364618 | MS.gene073312:CDS |
| GCTTTAATGAATGGGGCTCA+CGG | 0.557113 | 8.1:+5363223 | MS.gene073312:CDS |
| GAGGCAGAGCAACAAGATGA+TGG | 0.560054 | 8.1:+5364174 | MS.gene073312:CDS |
| GATTGGAAGAGGTGAATCGA+TGG | 0.561413 | 8.1:-5364385 | None:intergenic |
| TCTCACAGGAAAGTAGTGTT+GGG | 0.563238 | 8.1:+5364316 | MS.gene073312:CDS |
| ACTTTCATCCTTTGTAACGT+GGG | 0.565238 | 8.1:-5361252 | None:intergenic |
| AAATCCGTCTCAATATGCCT+TGG | 0.567226 | 8.1:-5362228 | None:intergenic |
| GGGCGCAATAATGATTCCAC+AGG | 0.567344 | 8.1:+5364444 | MS.gene073312:CDS |
| TTCTACAAGCGCAGGTGTCG+AGG | 0.567649 | 8.1:-5363752 | None:intergenic |
| CACAGTACTTTGCTCTACGC+TGG | 0.568902 | 8.1:+5363401 | MS.gene073312:CDS |
| GTTTGAAGCTTTAATGAATG+GGG | 0.569176 | 8.1:+5363216 | MS.gene073312:CDS |
| ACTCATTAGGAGAACTAGCT+AGG | 0.569589 | 8.1:-5364275 | None:intergenic |
| GGCTCACGGTTCAGTTGCAA+TGG | 0.571038 | 8.1:+5363237 | MS.gene073312:CDS |
| TAATCATTCTGTAGCAGTTG+AGG | 0.571250 | 8.1:+5364155 | MS.gene073312:CDS |
| TTCCAGACAAAAGGGTGCCA+AGG | 0.572383 | 8.1:+5362211 | MS.gene073312:CDS |
| TATGGGGTTGAAGGTGAACT+GGG | 0.574976 | 8.1:+5363148 | MS.gene073312:CDS |
| AAGATCTATCCAAGGAACTT+GGG | 0.576219 | 8.1:+5364079 | MS.gene073312:CDS |
| CCCGAGTGTGGTTATAGACA+AGG | 0.580071 | 8.1:+5362274 | MS.gene073312:CDS |
| CGGTTCCTGAGAAATGGTGC+CGG | 0.583182 | 8.1:-5360384 | None:intergenic |
| AGGATCTTTCATTCATCTCG+CGG | 0.583363 | 8.1:+5363547 | MS.gene073312:CDS |
| TTGTAACGTGGGGATCAACC+AGG | 0.583633 | 8.1:-5361241 | None:intergenic |
| GTTGCTAAGTGATGCTTATG+GGG | 0.585951 | 8.1:+5363132 | MS.gene073312:CDS |
| TACTTTCATCCTTTGTAACG+TGG | 0.587230 | 8.1:-5361253 | None:intergenic |
| TAGCCATCTCGTTGATCTCG+GGG | 0.587269 | 8.1:+5363372 | MS.gene073312:CDS |
| GCAACCTATCTCCGGTGGCA+GGG | 0.587568 | 8.1:+5364424 | MS.gene073312:CDS |
| CCACCGCTAATTCTCGAAGA+AGG | 0.589225 | 8.1:+5360516 | MS.gene073312:CDS |
| TTGCCGGAAAATCATGCCAC+CGG | 0.589609 | 8.1:+5360310 | None:intergenic |
| GGCGGATCCAACAGAGCCGG+TGG | 0.589682 | 8.1:-5360326 | None:intergenic |
| GGTTGATCCCCACGTTACAA+AGG | 0.589815 | 8.1:+5361244 | MS.gene073312:CDS |
| TTTATATGCAGATAGTACAT+GGG | 0.590854 | 8.1:+5362108 | MS.gene073312:intron |
| TGACAACCTCTTGATCGTCT+GGG | 0.594198 | 8.1:+5363456 | MS.gene073312:CDS |
| TAAAACTGAATAAATTCCAA+TGG | 0.598877 | 8.1:+5364493 | MS.gene073312:CDS |
| ATTACCTGATAATAGCTACT+GGG | 0.602058 | 8.1:+5363861 | MS.gene073312:CDS |
| TTCTGCTGACCAGAATGTGA+TGG | 0.603860 | 8.1:+5364674 | MS.gene073312:CDS |
| ACTTAATGCAAGAGTCTGCA+AGG | 0.606324 | 8.1:-5363716 | None:intergenic |
| TTTCATCCCAGACGATCAAG+AGG | 0.607164 | 8.1:-5363462 | None:intergenic |
| AATGGCGGATCCAACAGAGC+CGG | 0.608631 | 8.1:-5360329 | None:intergenic |
| CTTTCATCCTTTGTAACGTG+GGG | 0.608769 | 8.1:-5361251 | None:intergenic |
| ATTGGAAGAGGTGAATCGAT+GGG | 0.609774 | 8.1:-5364384 | None:intergenic |
| GAAAAGAGTACTTGCTTCTG+AGG | 0.610033 | 8.1:+5364557 | MS.gene073312:CDS |
| TGCAGAGCTGGAGAGGATGG+TGG | 0.616704 | 8.1:+5362147 | MS.gene073312:CDS |
| TTTGTTAGAAGATCTATCCA+AGG | 0.617410 | 8.1:+5364071 | MS.gene073312:CDS |
| TAGTTCACCAAATCTTGTCA+TGG | 0.618965 | 8.1:+5361274 | MS.gene073312:CDS |
| TCACGTTTATACCCAGAACA+TGG | 0.622550 | 8.1:+5362181 | MS.gene073312:CDS |
| ATGATCTTAGAGGTTTGCAG+TGG | 0.624245 | 8.1:+5360429 | MS.gene073312:CDS |
| TCAGGTATGCTAGTTTGAGA+GGG | 0.624547 | 8.1:+5361213 | MS.gene073312:intron |
| ACTTGGAGAACATAAAGCAA+AGG | 0.628302 | 8.1:-5362899 | None:intergenic |
| GCAGTGGCGTATAAATCTTG+GGG | 0.633132 | 8.1:+5360445 | MS.gene073312:CDS |
| TACCTGAATATGCTCAAGCA+TGG | 0.637984 | 8.1:-5364721 | None:intergenic |
| CAACCCCGAGATCAACGAGA+TGG | 0.640135 | 8.1:-5363375 | None:intergenic |
| GGTATGCTAGTTTGAGAGGG+CGG | 0.644507 | 8.1:+5361216 | MS.gene073312:intron |
| TCTGCTGACCAGAATGTGAT+GGG | 0.647152 | 8.1:+5364675 | MS.gene073312:CDS |
| GATGACGAAATCGGTTCTCA+CGG | 0.647201 | 8.1:+5363052 | MS.gene073312:CDS |
| TGAACCTGATTCACATGCAA+TGG | 0.648752 | 8.1:-5363818 | None:intergenic |
| AATCTCTGGAGACAGGTCGT+AGG | 0.651148 | 8.1:-5363640 | None:intergenic |
| TAAAATGGAAAAGCATGCAG+AGG | 0.651374 | 8.1:+5363504 | MS.gene073312:CDS |
| GGTGCCAAGGCATATTGAGA+CGG | 0.652499 | 8.1:+5362224 | MS.gene073312:CDS |
| ATTTATCTCAGCTATTGCTG+TGG | 0.655369 | 8.1:+5363573 | MS.gene073312:CDS |
| CTTGTAGAATATAACAACAA+GGG | 0.657239 | 8.1:+5363766 | MS.gene073312:CDS |
| CCTTGTCTATAACCACACTC+GGG | 0.658075 | 8.1:-5362274 | None:intergenic |
| GCTTGTAGAATATAACAACA+AGG | 0.658953 | 8.1:+5363765 | MS.gene073312:CDS |
| ACCTGATTCACATGCAATGG+TGG | 0.659619 | 8.1:-5363815 | None:intergenic |
| TCTGCTTTCCAACAAGAGTG+TGG | 0.661245 | 8.1:+5364880 | MS.gene073312:CDS |
| AGATGTCTTAGCAGAAACAC+CGG | 0.661553 | 8.1:+5364231 | MS.gene073312:CDS |
| GGCACGACGAAGATCATCAA+CGG | 0.661655 | 8.1:-5360495 | None:intergenic |
| AAGTGTGGCCGAATTTCCTG+TGG | 0.661701 | 8.1:-5364460 | None:intergenic |
| TGAGAGCAACCTATCTCCGG+TGG | 0.662239 | 8.1:+5364419 | MS.gene073312:CDS |
| TCTTCGTCAACAATCAAGAG+TGG | 0.663979 | 8.1:+5364015 | MS.gene073312:CDS |
| TGTCTTAGACATCCCGAGTG+TGG | 0.664217 | 8.1:+5362262 | MS.gene073312:CDS |
| TTATATGCAGATAGTACATG+GGG | 0.672097 | 8.1:+5362109 | MS.gene073312:intron |
| GCAGAAGCTTCAATTACAGG+TGG | 0.678657 | 8.1:-5363307 | None:intergenic |
| AGCATCACTTAGCAACACAA+TGG | 0.690065 | 8.1:-5363125 | None:intergenic |
| CCTTCTTCGAGAATTAGCGG+TGG | 0.702456 | 8.1:-5360516 | None:intergenic |
| TAGCAGAAACACCGGCAGCG+AGG | 0.719930 | 8.1:+5364239 | MS.gene073312:CDS |
| CAGCGTAGAGCAAAGTACTG+TGG | 0.720652 | 8.1:-5363400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTCATTAATTTCATCA+AGG | - | chr8.1:5364353-5364372 | None:intergenic | 15.0% |
| !! | AATTTCATTAATTTCATCAA+GGG | - | chr8.1:5364352-5364371 | None:intergenic | 15.0% |
| !! | ACATAGTTTGATATAAATTA+TGG | - | chr8.1:5361565-5361584 | None:intergenic | 15.0% |
| !! | ACTAAAATTTAAAAACAAGT+TGG | + | chr8.1:5364762-5364781 | MS.gene073312:intron | 15.0% |
| !! | GTAGAAATAAATATATAATC+TGG | - | chr8.1:5361532-5361551 | None:intergenic | 15.0% |
| !! | TTTAGTTAACTAGTAAAAAA+CGG | + | chr8.1:5362501-5362520 | MS.gene073312:intron | 15.0% |
| !! | TTTATCAGATAATAGTAAAA+TGG | + | chr8.1:5363489-5363508 | MS.gene073312:CDS | 15.0% |
| !!! | ATCAATATCATTTTATATCA+AGG | + | chr8.1:5360940-5360959 | MS.gene073312:intron | 15.0% |
| !!! | CTTCTTTTTATTTATTTTGT+AGG | + | chr8.1:5362857-5362876 | MS.gene073312:intron | 15.0% |
| !!! | TGTTTTTGTTTTTTTATGAT+TGG | + | chr8.1:5360781-5360800 | MS.gene073312:intron | 15.0% |
| !!! | TTTTATTCATACAGATAATA+TGG | - | chr8.1:5362655-5362674 | None:intergenic | 15.0% |
| !!! | TTTTGTCATATAATCTTTAA+TGG | + | chr8.1:5362594-5362613 | MS.gene073312:intron | 15.0% |
| !!! | TTTTTTATTTGATTTTCTGT+CGG | + | chr8.1:5360917-5360936 | MS.gene073312:intron | 15.0% |
| !! | AAAATGAAAACTGAAAACAT+TGG | - | chr8.1:5361735-5361754 | None:intergenic | 20.0% |
| !! | AAAATTTGCAATGATTTACT+TGG | - | chr8.1:5361320-5361339 | None:intergenic | 20.0% |
| !! | AATAGAAGATAAGAAACTAA+GGG | + | chr8.1:5361699-5361718 | MS.gene073312:intron | 20.0% |
| !! | AATTTACATCCTTCTATAAT+TGG | - | chr8.1:5360590-5360609 | None:intergenic | 20.0% |
| !! | ATCCAAAAATAAAATGCAAT+TGG | - | chr8.1:5361151-5361170 | None:intergenic | 20.0% |
| !! | ATTATCCAAATACCATAAAT+TGG | - | chr8.1:5360641-5360660 | None:intergenic | 20.0% |
| !! | CATAACATAAACAAGTTATA+CGG | - | chr8.1:5362798-5362817 | None:intergenic | 20.0% |
| !! | TAAAACTGAATAAATTCCAA+TGG | + | chr8.1:5364493-5364512 | MS.gene073312:CDS | 20.0% |
| !! | TAATAGAAGATAAGAAACTA+AGG | + | chr8.1:5361698-5361717 | MS.gene073312:intron | 20.0% |
| !! | TTAAAACATGTGAGAAAAAA+TGG | - | chr8.1:5360617-5360636 | None:intergenic | 20.0% |
| !! | TTAATCCAATTTATGGTATT+TGG | + | chr8.1:5360633-5360652 | MS.gene073312:intron | 20.0% |
| !! | TTGATATAAATTATGGAAGT+TGG | - | chr8.1:5361558-5361577 | None:intergenic | 20.0% |
| !! | TTTATATCAAACTATGTTTC+CGG | + | chr8.1:5361568-5361587 | MS.gene073312:intron | 20.0% |
| !!! | ACATGTTTTAATCCAATTTA+TGG | + | chr8.1:5360626-5360645 | MS.gene073312:intron | 20.0% |
| !!! | ACATTAAATGATTAACTTGT+TGG | + | chr8.1:5362721-5362740 | MS.gene073312:intron | 20.0% |
| !!! | AGAAATTTGTTTTTCCATTT+GGG | + | chr8.1:5360991-5361010 | MS.gene073312:intron | 20.0% |
| !!! | ATCCAATTGCATTTTATTTT+TGG | + | chr8.1:5361146-5361165 | MS.gene073312:intron | 20.0% |
| !!! | TAGAAATTTGTTTTTCCATT+TGG | + | chr8.1:5360990-5361009 | MS.gene073312:intron | 20.0% |
| ! | AAAAAGAAGCTCATTAATGT+TGG | - | chr8.1:5362846-5362865 | None:intergenic | 25.0% |
| ! | AAGGTTAAGCTAAACAATAA+TGG | + | chr8.1:5361642-5361661 | MS.gene073312:intron | 25.0% |
| ! | ACTAAAGCTTTCATTCAATT+AGG | - | chr8.1:5362487-5362506 | None:intergenic | 25.0% |
| ! | ACTGAGTAAATAGGAATTTA+TGG | - | chr8.1:5361399-5361418 | None:intergenic | 25.0% |
| ! | ATAAATCTATTTCCAGCATT+TGG | + | chr8.1:5361362-5361381 | MS.gene073312:intron | 25.0% |
| ! | ATAGAAGATAAGAAACTAAG+GGG | + | chr8.1:5361700-5361719 | MS.gene073312:intron | 25.0% |
| ! | ATCAAAACAAAGACACTATA+AGG | - | chr8.1:5360567-5360586 | None:intergenic | 25.0% |
| ! | ATTTATCCAGATGACATAAT+GGG | - | chr8.1:5361348-5361367 | None:intergenic | 25.0% |
| ! | CAATTATGATAGAGAGAATA+TGG | - | chr8.1:5361900-5361919 | None:intergenic | 25.0% |
| ! | CTTGTAGAATATAACAACAA+GGG | + | chr8.1:5363766-5363785 | MS.gene073312:CDS | 25.0% |
| ! | GAAAACAAATAGATGGATAA+TGG | - | chr8.1:5361507-5361526 | None:intergenic | 25.0% |
| ! | GAAGAAGATATAGAAAATCT+CGG | + | chr8.1:5364105-5364124 | MS.gene073312:CDS | 25.0% |
| ! | GATAATGAGTTAATAGAACT+TGG | + | chr8.1:5361098-5361117 | MS.gene073312:intron | 25.0% |
| ! | TAAAAAATCTTCAGACTTGA+CGG | + | chr8.1:5363030-5363049 | MS.gene073312:CDS | 25.0% |
| ! | TCATGATATTTGAACTCATT+AGG | - | chr8.1:5364291-5364310 | None:intergenic | 25.0% |
| ! | TTATATCAAACTATGTTTCC+GGG | + | chr8.1:5361569-5361588 | MS.gene073312:intron | 25.0% |
| ! | TTATCAGGTAATAAACTCTT+AGG | - | chr8.1:5363853-5363872 | None:intergenic | 25.0% |
| ! | TTCATAATTCATCAAGTATC+AGG | - | chr8.1:5362751-5362770 | None:intergenic | 25.0% |
| ! | TTTATATGCAGATAGTACAT+GGG | + | chr8.1:5362108-5362127 | MS.gene073312:intron | 25.0% |
| !! | AATAAACTCTTAGGAGTTTT+TGG | - | chr8.1:5363844-5363863 | None:intergenic | 25.0% |
| !! | ATGGGAACTTTAAAGAATAT+TGG | + | chr8.1:5364693-5364712 | MS.gene073312:CDS | 25.0% |
| !! | ATGTTTGAAGCTTTAATGAA+TGG | + | chr8.1:5363214-5363233 | MS.gene073312:CDS | 25.0% |
| !! | GCATTTTCAGAAATTTTGAA+AGG | + | chr8.1:5361823-5361842 | MS.gene073312:intron | 25.0% |
| !! | TAGTACGTCTAAAAATGTTT+TGG | + | chr8.1:5364924-5364943 | MS.gene073312:CDS | 25.0% |
| !! | TGCAGTACTGTTAATTTTAA+TGG | + | chr8.1:5364648-5364667 | MS.gene073312:CDS | 25.0% |
| !! | TGGGAACTTTAAAGAATATT+GGG | + | chr8.1:5364694-5364713 | MS.gene073312:CDS | 25.0% |
| !! | TGTTTGAAGCTTTAATGAAT+GGG | + | chr8.1:5363215-5363234 | MS.gene073312:CDS | 25.0% |
| !! | TTTTAATGTTTGTGTTCTCT+GGG | - | chr8.1:5363675-5363694 | None:intergenic | 25.0% |
| !! | TTTTATATTCCTAGAAAGTG+TGG | - | chr8.1:5364478-5364497 | None:intergenic | 25.0% |
| !! | TTTTTAATGTTTGTGTTCTC+TGG | - | chr8.1:5363676-5363695 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTCCTTCTAACT+CGG | + | chr8.1:5362375-5362394 | MS.gene073312:intron | 25.0% |
| !!! | GCTAGATTTGTTTTCAAAAA+CGG | - | chr8.1:5361805-5361824 | None:intergenic | 25.0% |
| !!! | TGAGACGGATTTTATTATTA+TGG | + | chr8.1:5362239-5362258 | MS.gene073312:CDS | 25.0% |
| !!! | TGTTTTGATCCAATTATAGA+AGG | + | chr8.1:5360578-5360597 | MS.gene073312:intron | 25.0% |
| !!! | TTCGTTTTAAATTGCTAACA+AGG | - | chr8.1:5361946-5361965 | None:intergenic | 25.0% |
| AACAATCAAGAGTGGTAAAA+AGG | + | chr8.1:5364023-5364042 | MS.gene073312:CDS | 30.0% | |
| ACTTTGATCGTTATACTTGT+TGG | - | chr8.1:5364595-5364614 | None:intergenic | 30.0% | |
| AGGAATTTATGGCAGTATAA+CGG | - | chr8.1:5361388-5361407 | None:intergenic | 30.0% | |
| ATTACCTGATAATAGCTACT+GGG | + | chr8.1:5363861-5363880 | MS.gene073312:CDS | 30.0% | |
| CTTTATATGCAGATAGTACA+TGG | + | chr8.1:5362107-5362126 | MS.gene073312:intron | 30.0% | |
| GAAAAATAGATGGACAGAAA+AGG | + | chr8.1:5363957-5363976 | MS.gene073312:CDS | 30.0% | |
| GATTTATCCAGATGACATAA+TGG | - | chr8.1:5361349-5361368 | None:intergenic | 30.0% | |
| GCTTGTAGAATATAACAACA+AGG | + | chr8.1:5363765-5363784 | MS.gene073312:CDS | 30.0% | |
| GTTTCAGAGAAGTTATGTTA+AGG | + | chr8.1:5364828-5364847 | MS.gene073312:intron | 30.0% | |
| TAAACAAGTTATACGGAATC+TGG | - | chr8.1:5362791-5362810 | None:intergenic | 30.0% | |
| TAAATACGTTTGCTCACTTT+GGG | + | chr8.1:5362347-5362366 | MS.gene073312:intron | 30.0% | |
| TAACTCATTATCTCTCAAGA+TGG | - | chr8.1:5361090-5361109 | None:intergenic | 30.0% | |
| TAATGATTCCACAGGAAATT+CGG | + | chr8.1:5364452-5364471 | MS.gene073312:CDS | 30.0% | |
| TATTACCTGATAATAGCTAC+TGG | + | chr8.1:5363860-5363879 | MS.gene073312:CDS | 30.0% | |
| TCTGACATAAGCAACAATTA+CGG | + | chr8.1:5364198-5364217 | MS.gene073312:CDS | 30.0% | |
| TGAATAAATTCCAATGGCTT+TGG | + | chr8.1:5364499-5364518 | MS.gene073312:CDS | 30.0% | |
| TGTTTCGATCGTATAGATTT+GGG | + | chr8.1:5361028-5361047 | MS.gene073312:intron | 30.0% | |
| TTAAATTGCTAACAAGGAGA+TGG | - | chr8.1:5361940-5361959 | None:intergenic | 30.0% | |
| TTATATGCAGATAGTACATG+GGG | + | chr8.1:5362109-5362128 | MS.gene073312:intron | 30.0% | |
| TTCCATCTCAGAAAAATAGA+TGG | + | chr8.1:5363947-5363966 | MS.gene073312:CDS | 30.0% | |
| TTGCTCTATACTGAGTAAAT+AGG | - | chr8.1:5361408-5361427 | None:intergenic | 30.0% | |
| TTGTTTCGATCGTATAGATT+TGG | + | chr8.1:5361027-5361046 | MS.gene073312:intron | 30.0% | |
| TTTATCCAGATGACATAATG+GGG | - | chr8.1:5361347-5361366 | None:intergenic | 30.0% | |
| TTTGTTAGAAGATCTATCCA+AGG | + | chr8.1:5364071-5364090 | MS.gene073312:CDS | 30.0% | |
| ! | AACAAATAGATGGATAATGG+AGG | - | chr8.1:5361504-5361523 | None:intergenic | 30.0% |
| ! | ATGTTTTCAGAAAGTAAACG+CGG | + | chr8.1:5361992-5362011 | MS.gene073312:intron | 30.0% |
| ! | CATTTTACAGACAGATTTGA+TGG | + | chr8.1:5362965-5362984 | MS.gene073312:CDS | 30.0% |
| ! | GTTTGAAGCTTTAATGAATG+GGG | + | chr8.1:5363216-5363235 | MS.gene073312:CDS | 30.0% |
| ! | TTAATGTTTCTAATCCTGTC+AGG | + | chr8.1:5361195-5361214 | MS.gene073312:intron | 30.0% |
| ! | TTACTTGGATTTTGTGAAAG+CGG | - | chr8.1:5361305-5361324 | None:intergenic | 30.0% |
| !! | AAAGTTCAGAGCTTTATTGA+TGG | + | chr8.1:5360682-5360701 | MS.gene073312:intron | 30.0% |
| !! | AAGTTCAGAGCTTTATTGAT+GGG | + | chr8.1:5360683-5360702 | MS.gene073312:intron | 30.0% |
| !! | ATTTGTTTTCAAAAACGGTG+AGG | - | chr8.1:5361800-5361819 | None:intergenic | 30.0% |
| !!! | AAAAATGTTTTGGTTGGCAA+AGG | + | chr8.1:5364934-5364953 | MS.gene073312:CDS | 30.0% |
| !!! | AAAATGTTTTGGTTGGCAAA+GGG | + | chr8.1:5364935-5364954 | MS.gene073312:CDS | 30.0% |
| !!! | ACGTCTAAAAATGTTTTGGT+TGG | + | chr8.1:5364928-5364947 | MS.gene073312:CDS | 30.0% |
| AAAACGGTGAGGAAAATACT+TGG | - | chr8.1:5361789-5361808 | None:intergenic | 35.0% | |
| AAAAGCGAACCAATTAAGCA+CGG | - | chr8.1:5362408-5362427 | None:intergenic | 35.0% | |
| AACAAAGACACTATAAGGCA+TGG | - | chr8.1:5360562-5360581 | None:intergenic | 35.0% | |
| AACAACACTCAAATCCCAAA+TGG | - | chr8.1:5361008-5361027 | None:intergenic | 35.0% | |
| AACACAATGGTCTGTATCTT+AGG | - | chr8.1:5363115-5363134 | None:intergenic | 35.0% | |
| AAGATCTATCCAAGGAACTT+GGG | + | chr8.1:5364079-5364098 | MS.gene073312:CDS | 35.0% | |
| AATGGCAATCAACAAATGCT+TGG | + | chr8.1:5361660-5361679 | MS.gene073312:intron | 35.0% | |
| AATTATGAACCGCCTTTCTT+GGG | + | chr8.1:5362762-5362781 | MS.gene073312:intron | 35.0% | |
| ACCAATAATAGCAAGGAACT+TGG | - | chr8.1:5360728-5360747 | None:intergenic | 35.0% | |
| ACTTGGAGAACATAAAGCAA+AGG | - | chr8.1:5362902-5362921 | None:intergenic | 35.0% | |
| ACTTTCATCCTTTGTAACGT+GGG | - | chr8.1:5361255-5361274 | None:intergenic | 35.0% | |
| ATCGTATAGATTTGGGCATT+TGG | + | chr8.1:5361035-5361054 | MS.gene073312:intron | 35.0% | |
| ATTTATCTCAGCTATTGCTG+TGG | + | chr8.1:5363573-5363592 | MS.gene073312:CDS | 35.0% | |
| CAAAGTGAGCAAACGTATTT+AGG | - | chr8.1:5362348-5362367 | None:intergenic | 35.0% | |
| CCAATAATAGCAAGGAACTT+GGG | - | chr8.1:5360727-5360746 | None:intergenic | 35.0% | |
| CGTTTATTCGATGATCTTAG+AGG | + | chr8.1:5360419-5360438 | MS.gene073312:CDS | 35.0% | |
| CTAAATACGTTTGCTCACTT+TGG | + | chr8.1:5362346-5362365 | MS.gene073312:intron | 35.0% | |
| GAAGTTGAAGATGAAGAAGA+TGG | - | chr8.1:5360476-5360495 | None:intergenic | 35.0% | |
| GCAACTATTTCCAGACAAAA+GGG | + | chr8.1:5362203-5362222 | MS.gene073312:CDS | 35.0% | |
| GCTGAAGAACTTAAACAAGA+TGG | + | chr8.1:5363910-5363929 | MS.gene073312:CDS | 35.0% | |
| GCTTATCACCAATAATAGCA+AGG | - | chr8.1:5360735-5360754 | None:intergenic | 35.0% | |
| GTATCATTTATTGTCGCATG+TGG | + | chr8.1:5363336-5363355 | MS.gene073312:CDS | 35.0% | |
| TAATCATTCTGTAGCAGTTG+AGG | + | chr8.1:5364155-5364174 | MS.gene073312:CDS | 35.0% | |
| TACTTTCATCCTTTGTAACG+TGG | - | chr8.1:5361256-5361275 | None:intergenic | 35.0% | |
| TAGTTCACCAAATCTTGTCA+TGG | + | chr8.1:5361274-5361293 | MS.gene073312:CDS | 35.0% | |
| TATTGTGTGTAACTGTTGCT+TGG | - | chr8.1:5362312-5362331 | None:intergenic | 35.0% | |
| TCATACAGATAATATGGCAG+TGG | - | chr8.1:5362649-5362668 | None:intergenic | 35.0% | |
| TCATCGAATAAACGATTCTC+CGG | - | chr8.1:5360413-5360432 | None:intergenic | 35.0% | |
| TCTGGTCGAAAACAAATAGA+TGG | - | chr8.1:5361514-5361533 | None:intergenic | 35.0% | |
| TGGAAGTTTGGTCGTAATAA+TGG | + | chr8.1:5364519-5364538 | MS.gene073312:CDS | 35.0% | |
| TGTTGCTAAGTGATGCTTAT+GGG | + | chr8.1:5363131-5363150 | MS.gene073312:CDS | 35.0% | |
| TTAAAGTTCCCATCACATTC+TGG | - | chr8.1:5364686-5364705 | None:intergenic | 35.0% | |
| TTACCTTCTTCGAGAATTAG+CGG | - | chr8.1:5360522-5360541 | None:intergenic | 35.0% | |
| TTGTTATATTCTACAAGCGC+AGG | - | chr8.1:5363763-5363782 | None:intergenic | 35.0% | |
| ! | AAAGTTTTCGAACTTCTGCA+AGG | - | chr8.1:5362937-5362956 | None:intergenic | 35.0% |
| ! | CATTTTATTGTCACCACAGA+TGG | - | chr8.1:5362085-5362104 | None:intergenic | 35.0% |
| ! | GTGCTAAGGCTAGTTATATA+GGG | - | chr8.1:5362455-5362474 | None:intergenic | 35.0% |
| ! | GTTTAAGTTCTTCAGCACTA+TGG | - | chr8.1:5363906-5363925 | None:intergenic | 35.0% |
| ! | TAAAATGGAAAAGCATGCAG+AGG | + | chr8.1:5363504-5363523 | MS.gene073312:CDS | 35.0% |
| ! | TACTTGGATTTTGTGAAAGC+GGG | - | chr8.1:5361304-5361323 | None:intergenic | 35.0% |
| ! | TCTTGCACTTTTCATGAGAT+AGG | + | chr8.1:5361461-5361480 | MS.gene073312:intron | 35.0% |
| ! | TGTGCTAAGGCTAGTTATAT+AGG | - | chr8.1:5362456-5362475 | None:intergenic | 35.0% |
| !! | ACAACACAGACACTTGTTTT+AGG | + | chr8.1:5363527-5363546 | MS.gene073312:CDS | 35.0% |
| !! | GTCCATCTATTTTTCTGAGA+TGG | - | chr8.1:5363952-5363971 | None:intergenic | 35.0% |
| !! | TTATGTTCTCCAAGTTGATG+TGG | + | chr8.1:5362907-5362926 | MS.gene073312:CDS | 35.0% |
| AAATCCGTCTCAATATGCCT+TGG | - | chr8.1:5362231-5362250 | None:intergenic | 40.0% | |
| ACCTTGTCTATAACCACACT+CGG | - | chr8.1:5362278-5362297 | None:intergenic | 40.0% | |
| ACTCATTAGGAGAACTAGCT+AGG | - | chr8.1:5364278-5364297 | None:intergenic | 40.0% | |
| ACTTAATGCAAGAGTCTGCA+AGG | - | chr8.1:5363719-5363738 | None:intergenic | 40.0% | |
| AGAAGGTAAGCCAATTCACT+TGG | + | chr8.1:5360533-5360552 | MS.gene073312:intron | 40.0% | |
| AGATGTCTTAGCAGAAACAC+CGG | + | chr8.1:5364231-5364250 | MS.gene073312:CDS | 40.0% | |
| AGCAAACGTATTTAGGAGGA+AGG | - | chr8.1:5362341-5362360 | None:intergenic | 40.0% | |
| AGCATCACTTAGCAACACAA+TGG | - | chr8.1:5363128-5363147 | None:intergenic | 40.0% | |
| AGGATCTTTCATTCATCTCG+CGG | + | chr8.1:5363547-5363566 | MS.gene073312:CDS | 40.0% | |
| AGTGAGCAAACGTATTTAGG+AGG | - | chr8.1:5362345-5362364 | None:intergenic | 40.0% | |
| ATAGCTACTGGGAAGAAAAG+TGG | + | chr8.1:5363872-5363891 | MS.gene073312:CDS | 40.0% | |
| ATGATCTTAGAGGTTTGCAG+TGG | + | chr8.1:5360429-5360448 | MS.gene073312:CDS | 40.0% | |
| ATTGGAAGAGGTGAATCGAT+GGG | - | chr8.1:5364387-5364406 | None:intergenic | 40.0% | |
| CCTTTCAATAAAGCAGATGC+AGG | - | chr8.1:5362686-5362705 | None:intergenic | 40.0% | |
| CTACAGAATGATTATCCTGC+TGG | - | chr8.1:5364149-5364168 | None:intergenic | 40.0% | |
| CTCTCAACAAGCACAATACA+TGG | + | chr8.1:5360827-5360846 | MS.gene073312:intron | 40.0% | |
| CTCTCTACACTATTGGAAAC+GGG | + | chr8.1:5362558-5362577 | MS.gene073312:intron | 40.0% | |
| CTCTTGATTGTTGACGAAGA+TGG | - | chr8.1:5364015-5364034 | None:intergenic | 40.0% | |
| CTGGGAAGCTTAATAATCTC+TGG | - | chr8.1:5363657-5363676 | None:intergenic | 40.0% | |
| CTTTCATCCTTTGTAACGTG+GGG | - | chr8.1:5361254-5361273 | None:intergenic | 40.0% | |
| GAAGATCTATCCAAGGAACT+TGG | + | chr8.1:5364078-5364097 | MS.gene073312:CDS | 40.0% | |
| GAATTATGAACCGCCTTTCT+TGG | + | chr8.1:5362761-5362780 | MS.gene073312:intron | 40.0% | |
| GCCATTGTCAAAAACAGCAT+CGG | + | chr8.1:5360346-5360365 | MS.gene073312:CDS | 40.0% | |
| GCTCTCTACACTATTGGAAA+CGG | + | chr8.1:5362557-5362576 | MS.gene073312:intron | 40.0% | |
| GGAAATAGTTGCCATGTTCT+GGG | - | chr8.1:5362195-5362214 | None:intergenic | 40.0% | |
| GGCAACTATTTCCAGACAAA+AGG | + | chr8.1:5362202-5362221 | MS.gene073312:CDS | 40.0% | |
| GGTAAGTAACCGTGCTTAAT+TGG | + | chr8.1:5362396-5362415 | MS.gene073312:intron | 40.0% | |
| GTTGCTAAGTGATGCTTATG+GGG | + | chr8.1:5363132-5363151 | MS.gene073312:CDS | 40.0% | |
| GTTGGCACTAAATAAGCATG+TGG | - | chr8.1:5361610-5361629 | None:intergenic | 40.0% | |
| TACCTGAATATGCTCAAGCA+TGG | - | chr8.1:5364724-5364743 | None:intergenic | 40.0% | |
| TATAGCCATCTCGTTGATCT+CGG | + | chr8.1:5363370-5363389 | MS.gene073312:CDS | 40.0% | |
| TATCAAACTATGTTTCCGGG+AGG | + | chr8.1:5361572-5361591 | MS.gene073312:intron | 40.0% | |
| TCACGTTTATACCCAGAACA+TGG | + | chr8.1:5362181-5362200 | MS.gene073312:CDS | 40.0% | |
| TCATGAAACATTATGCCAGC+AGG | + | chr8.1:5364131-5364150 | MS.gene073312:CDS | 40.0% | |
| TCGGTTTCGTCTTTAATCTC+CGG | + | chr8.1:5360365-5360384 | MS.gene073312:CDS | 40.0% | |
| TCTCATGCTCTCTACACTAT+TGG | + | chr8.1:5362551-5362570 | MS.gene073312:intron | 40.0% | |
| TCTCTTATTCTCCTGTTGCT+GGG | + | chr8.1:5363269-5363288 | MS.gene073312:CDS | 40.0% | |
| TCTTCCCAGTAGCTATTATC+AGG | - | chr8.1:5363868-5363887 | None:intergenic | 40.0% | |
| TCTTCGTCAACAATCAAGAG+TGG | + | chr8.1:5364015-5364034 | MS.gene073312:CDS | 40.0% | |
| TGAACCTGATTCACATGCAA+TGG | - | chr8.1:5363821-5363840 | None:intergenic | 40.0% | |
| TGCAGTGGCGTATAAATCTT+GGG | + | chr8.1:5360444-5360463 | MS.gene073312:CDS | 40.0% | |
| TGGAAATAGTTGCCATGTTC+TGG | - | chr8.1:5362196-5362215 | None:intergenic | 40.0% | |
| TGGTATCACTAAATTCCTCC+CGG | - | chr8.1:5361590-5361609 | None:intergenic | 40.0% | |
| TTACACCCCATTATGTCATC+TGG | + | chr8.1:5361339-5361358 | MS.gene073312:intron | 40.0% | |
| TTCTCTTATTCTCCTGTTGC+TGG | + | chr8.1:5363268-5363287 | MS.gene073312:CDS | 40.0% | |
| TTGCAGTGGCGTATAAATCT+TGG | + | chr8.1:5360443-5360462 | MS.gene073312:CDS | 40.0% | |
| ! | CCTGCATCTGCTTTATTGAA+AGG | + | chr8.1:5362683-5362702 | MS.gene073312:intron | 40.0% |
| ! | GCTTAATAATCTCTGGAGAC+AGG | - | chr8.1:5363650-5363669 | None:intergenic | 40.0% |
| ! | GTGTTGCTAAGTGATGCTTA+TGG | + | chr8.1:5363130-5363149 | MS.gene073312:CDS | 40.0% |
| ! | TAGCAACCTTTTGTCTGAGA+TGG | + | chr8.1:5364999-5365018 | MS.gene073312:CDS | 40.0% |
| ! | TCAGGTATGCTAGTTTGAGA+GGG | + | chr8.1:5361213-5361232 | MS.gene073312:intron | 40.0% |
| !! | CCCAAGTTCCTTGCTATTAT+TGG | + | chr8.1:5360724-5360743 | MS.gene073312:intron | 40.0% |
| !! | CTTCTCTGAAACGTAAGTTC+AGG | - | chr8.1:5364820-5364839 | None:intergenic | 40.0% |
| !! | GAAAAGAGTACTTGCTTCTG+AGG | + | chr8.1:5364557-5364576 | MS.gene073312:CDS | 40.0% |
| !! | GCGTTGATTTATTCGTCATG+TGG | + | chr8.1:5361057-5361076 | MS.gene073312:intron | 40.0% |
| !! | TTCCAATGGCTTTGGAAGTT+TGG | + | chr8.1:5364507-5364526 | MS.gene073312:CDS | 40.0% |
| !!! | ACCGATGCTGTTTTTGACAA+TGG | - | chr8.1:5360350-5360369 | None:intergenic | 40.0% |
| !!! | CGCTGGTTGAGAGTTTTATT+TGG | + | chr8.1:5363418-5363437 | MS.gene073312:CDS | 40.0% |
| !!! | CTTTTTTCACAATGCAGAGC+TGG | + | chr8.1:5362135-5362154 | MS.gene073312:CDS | 40.0% |
| !!! | GATGCTGTTTTTGACAATGG+CGG | - | chr8.1:5360347-5360366 | None:intergenic | 40.0% |
| AACCTTCTTGTGAGTGCAGT+TGG | - | chr8.1:5361628-5361647 | None:intergenic | 45.0% | |
| AAGATCACCAGCTGTAGAAG+AGG | - | chr8.1:5364628-5364647 | None:intergenic | 45.0% | |
| AATAAACGATTCTCCGGCAC+CGG | - | chr8.1:5360407-5360426 | None:intergenic | 45.0% | |
| ACCACCATTGCATGTGAATC+AGG | + | chr8.1:5363814-5363833 | MS.gene073312:CDS | 45.0% | |
| ACCTGATTCACATGCAATGG+TGG | - | chr8.1:5363818-5363837 | None:intergenic | 45.0% | |
| AGTGATGCTTATGGGGTTGA+AGG | + | chr8.1:5363139-5363158 | MS.gene073312:CDS | 45.0% | |
| ATAGCCATCTCGTTGATCTC+GGG | + | chr8.1:5363371-5363390 | MS.gene073312:CDS | 45.0% | |
| ATCTAACCCTCTCTTTCCGT+TGG | + | chr8.1:5362057-5362076 | MS.gene073312:intron | 45.0% | |
| CCTTGTCTATAACCACACTC+GGG | - | chr8.1:5362277-5362296 | None:intergenic | 45.0% | |
| CGGTTACTTACCGAGTTAGA+AGG | - | chr8.1:5362388-5362407 | None:intergenic | 45.0% | |
| CTCAAACTAGCATACCTGAC+AGG | - | chr8.1:5361212-5361231 | None:intergenic | 45.0% | |
| CTCTCAGGATGATCAGAGAT+TGG | - | chr8.1:5364405-5364424 | None:intergenic | 45.0% | |
| GAAATTCGGCCACACTTTCT+AGG | + | chr8.1:5364466-5364485 | MS.gene073312:CDS | 45.0% | |
| GACCAAACTTCCAAAGCCAT+TGG | - | chr8.1:5364512-5364531 | None:intergenic | 45.0% | |
| GATTGGAAGAGGTGAATCGA+TGG | - | chr8.1:5364388-5364407 | None:intergenic | 45.0% | |
| GCAGAAGCTTCAATTACAGG+TGG | - | chr8.1:5363310-5363329 | None:intergenic | 45.0% | |
| GCAGCAGAAGCTTCAATTAC+AGG | - | chr8.1:5363313-5363332 | None:intergenic | 45.0% | |
| GCAGTGGCGTATAAATCTTG+GGG | + | chr8.1:5360445-5360464 | MS.gene073312:CDS | 45.0% | |
| GCTTTAATGAATGGGGCTCA+CGG | + | chr8.1:5363223-5363242 | MS.gene073312:CDS | 45.0% | |
| GGACTGTGTGTTTGTGTAAC+AGG | + | chr8.1:5364849-5364868 | MS.gene073312:intron | 45.0% | |
| GGATGATCAGAGATTGGAAG+AGG | - | chr8.1:5364399-5364418 | None:intergenic | 45.0% | |
| GGCATGGTTACCAAGTGAAT+TGG | - | chr8.1:5360546-5360565 | None:intergenic | 45.0% | |
| GGGTTGTCCATGACAAGATT+TGG | - | chr8.1:5361284-5361303 | None:intergenic | 45.0% | |
| GTCCATGCTTGAGCATATTC+AGG | + | chr8.1:5364719-5364738 | MS.gene073312:CDS | 45.0% | |
| TACAGGTGGCAAACCAGTAT+GGG | - | chr8.1:5363296-5363315 | None:intergenic | 45.0% | |
| TATGGGGTTGAAGGTGAACT+GGG | + | chr8.1:5363148-5363167 | MS.gene073312:CDS | 45.0% | |
| TCTGCTGACCAGAATGTGAT+GGG | + | chr8.1:5364675-5364694 | MS.gene073312:CDS | 45.0% | |
| TCTGCTTTCCAACAAGAGTG+TGG | + | chr8.1:5364880-5364899 | MS.gene073312:CDS | 45.0% | |
| TGACAACCTCTTGATCGTCT+GGG | + | chr8.1:5363456-5363475 | MS.gene073312:CDS | 45.0% | |
| TTACAGGTGGCAAACCAGTA+TGG | - | chr8.1:5363297-5363316 | None:intergenic | 45.0% | |
| TTAGGCGTGCTAATGTGCTA+AGG | - | chr8.1:5362469-5362488 | None:intergenic | 45.0% | |
| TTATGGGGTTGAAGGTGAAC+TGG | + | chr8.1:5363147-5363166 | MS.gene073312:CDS | 45.0% | |
| TTCTGCTGACCAGAATGTGA+TGG | + | chr8.1:5364674-5364693 | MS.gene073312:CDS | 45.0% | |
| TTCTTCTGACCCAAGTTCCT+TGG | - | chr8.1:5364091-5364110 | None:intergenic | 45.0% | |
| TTGACAACCTCTTGATCGTC+TGG | + | chr8.1:5363455-5363474 | MS.gene073312:CDS | 45.0% | |
| TTTCATCCCAGACGATCAAG+AGG | - | chr8.1:5363465-5363484 | None:intergenic | 45.0% | |
| ! | GAAATCGGTTCTCACGGAAA+AGG | + | chr8.1:5363058-5363077 | MS.gene073312:CDS | 45.0% |
| ! | GACTTGACGGATGACGAAAT+CGG | + | chr8.1:5363043-5363062 | MS.gene073312:CDS | 45.0% |
| ! | GATGACGAAATCGGTTCTCA+CGG | + | chr8.1:5363052-5363071 | MS.gene073312:CDS | 45.0% |
| ! | GTCAGGTATGCTAGTTTGAG+AGG | + | chr8.1:5361212-5361231 | MS.gene073312:intron | 45.0% |
| ! | GTGTAACTGTTGCTTGGCTT+AGG | - | chr8.1:5362306-5362325 | None:intergenic | 45.0% |
| ! | TACGTTTGCTCACTTTGGGA+TGG | + | chr8.1:5362351-5362370 | MS.gene073312:intron | 45.0% |
| ! | TTCCAACAAGAGTGTGGTCA+GGG | + | chr8.1:5364886-5364905 | MS.gene073312:CDS | 45.0% |
| ! | TTTCCAACAAGAGTGTGGTC+AGG | + | chr8.1:5364885-5364904 | MS.gene073312:CDS | 45.0% |
| AAGCTCCTTGAGAGCTGACA+TGG | - | chr8.1:5364971-5364990 | None:intergenic | 50.0% | |
| AAGGAGATGGAAGACTCGTG+TGG | - | chr8.1:5361927-5361946 | None:intergenic | 50.0% | |
| AAGTGTGGCCGAATTTCCTG+TGG | - | chr8.1:5364463-5364482 | None:intergenic | 50.0% | |
| AATCTCCGGCACCATTTCTC+AGG | + | chr8.1:5360379-5360398 | MS.gene073312:CDS | 50.0% | |
| ACAGCTTCCTCTTCTACAGC+TGG | + | chr8.1:5364618-5364637 | MS.gene073312:CDS | 50.0% | |
| ATCTGGAAGCCCAAGAAAGG+CGG | - | chr8.1:5362774-5362793 | None:intergenic | 50.0% | |
| ATGGAGCCAACGGAAAGAGA+GGG | - | chr8.1:5362066-5362085 | None:intergenic | 50.0% | |
| CACAGTACTTTGCTCTACGC+TGG | + | chr8.1:5363401-5363420 | MS.gene073312:CDS | 50.0% | |
| CCACCGCTAATTCTCGAAGA+AGG | + | chr8.1:5360516-5360535 | MS.gene073312:CDS | 50.0% | |
| CCCGAGTGTGGTTATAGACA+AGG | + | chr8.1:5362274-5362293 | MS.gene073312:CDS | 50.0% | |
| CCTTCTTCGAGAATTAGCGG+TGG | - | chr8.1:5360519-5360538 | None:intergenic | 50.0% | |
| GAGGCAGAGCAACAAGATGA+TGG | + | chr8.1:5364174-5364193 | MS.gene073312:CDS | 50.0% | |
| GCAGTATAACGGCCAAATGC+TGG | - | chr8.1:5361377-5361396 | None:intergenic | 50.0% | |
| GGAATCTGGAAGCCCAAGAA+AGG | - | chr8.1:5362777-5362796 | None:intergenic | 50.0% | |
| GGCACGACGAAGATCATCAA+CGG | - | chr8.1:5360498-5360517 | None:intergenic | 50.0% | |
| GGGCGCAATAATGATTCCAC+AGG | + | chr8.1:5364444-5364463 | MS.gene073312:CDS | 50.0% | |
| GGTGCCAAGGCATATTGAGA+CGG | + | chr8.1:5362224-5362243 | MS.gene073312:CDS | 50.0% | |
| GGTTGATCCCCACGTTACAA+AGG | + | chr8.1:5361244-5361263 | MS.gene073312:CDS | 50.0% | |
| GTGTGGTCAGGGAACTTCAT+TGG | + | chr8.1:5364897-5364916 | MS.gene073312:CDS | 50.0% | |
| TACTGCCATGTCAGCTCTCA+AGG | + | chr8.1:5364963-5364982 | MS.gene073312:CDS | 50.0% | |
| TAGCCATCTCGTTGATCTCG+GGG | + | chr8.1:5363372-5363391 | MS.gene073312:CDS | 50.0% | |
| TCCTGAGAGCAACCTATCTC+CGG | + | chr8.1:5364416-5364435 | MS.gene073312:CDS | 50.0% | |
| TGCCAACTGCACTCACAAGA+AGG | + | chr8.1:5361623-5361642 | MS.gene073312:intron | 50.0% | |
| TGTCTTAGACATCCCGAGTG+TGG | + | chr8.1:5362262-5362281 | MS.gene073312:CDS | 50.0% | |
| TTCACAATGCAGAGCTGGAG+AGG | + | chr8.1:5362140-5362159 | MS.gene073312:CDS | 50.0% | |
| TTCCCTGACCACACTCTTGT+TGG | - | chr8.1:5364891-5364910 | None:intergenic | 50.0% | |
| TTGTAACGTGGGGATCAACC+AGG | - | chr8.1:5361244-5361263 | None:intergenic | 50.0% | |
| ! | AATCTCTGGAGACAGGTCGT+AGG | - | chr8.1:5363643-5363662 | None:intergenic | 50.0% |
| ! | GAATGAGTTTTCCTCGCTGC+CGG | - | chr8.1:5364253-5364272 | None:intergenic | 50.0% |
| ! | GGTATGCTAGTTTGAGAGGG+CGG | + | chr8.1:5361216-5361235 | MS.gene073312:intron | 50.0% |
| !! | CAGCGTAGAGCAAAGTACTG+TGG | - | chr8.1:5363403-5363422 | None:intergenic | 50.0% |
| !! | TTCCAGACAAAAGGGTGCCA+AGG | + | chr8.1:5362211-5362230 | MS.gene073312:CDS | 50.0% |
| !!! | TGTTTTGGTTGGCAAAGGGC+AGG | + | chr8.1:5364939-5364958 | MS.gene073312:CDS | 50.0% |
| ACCGGAGATAGGTTGCTCTC+AGG | - | chr8.1:5364420-5364439 | None:intergenic | 55.0% | |
| CAACCCCGAGATCAACGAGA+TGG | - | chr8.1:5363378-5363397 | None:intergenic | 55.0% | |
| CAATGCAGAGCTGGAGAGGA+TGG | + | chr8.1:5362144-5362163 | MS.gene073312:CDS | 55.0% | |
| CATTTCTCAGGAACCGGTGC+CGG | + | chr8.1:5360391-5360410 | MS.gene073312:CDS | 55.0% | |
| CGGCACCATTTCTCAGGAAC+CGG | + | chr8.1:5360385-5360404 | MS.gene073312:CDS | 55.0% | |
| CGGTTCCTGAGAAATGGTGC+CGG | - | chr8.1:5360387-5360406 | None:intergenic | 55.0% | |
| GATGGAGCCAACGGAAAGAG+AGG | - | chr8.1:5362067-5362086 | None:intergenic | 55.0% | |
| GGCTCACGGTTCAGTTGCAA+TGG | + | chr8.1:5363237-5363256 | MS.gene073312:CDS | 55.0% | |
| GTCACCACAGATGGAGCCAA+CGG | - | chr8.1:5362076-5362095 | None:intergenic | 55.0% | |
| TCATTATTGCGCCCTGCCAC+CGG | - | chr8.1:5364438-5364457 | None:intergenic | 55.0% | |
| TGAGAGCAACCTATCTCCGG+TGG | + | chr8.1:5364419-5364438 | MS.gene073312:CDS | 55.0% | |
| ! | CAAGGCGCTCCACATCAACT+TGG | - | chr8.1:5362919-5362938 | None:intergenic | 55.0% |
| ! | TGCCTTGGCACCCTTTTGTC+TGG | - | chr8.1:5362216-5362235 | None:intergenic | 55.0% |
| ! | TTCTACAAGCGCAGGTGTCG+AGG | - | chr8.1:5363755-5363774 | None:intergenic | 55.0% |
| !! | AATGGCGGATCCAACAGAGC+CGG | - | chr8.1:5360332-5360351 | None:intergenic | 55.0% |
| !! | CTTTCCGTTGGCTCCATCTG+TGG | + | chr8.1:5362069-5362088 | MS.gene073312:intron | 55.0% |
| AGCAACCTATCTCCGGTGGC+AGG | + | chr8.1:5364423-5364442 | MS.gene073312:CDS | 60.0% | |
| CCAGTATGGGACCCAGCAAC+AGG | - | chr8.1:5363283-5363302 | None:intergenic | 60.0% | |
| CCTGTTGCTGGGTCCCATAC+TGG | + | chr8.1:5363280-5363299 | MS.gene073312:CDS | 60.0% | |
| GCAACCTATCTCCGGTGGCA+GGG | + | chr8.1:5364424-5364443 | MS.gene073312:CDS | 60.0% | |
| TAGCAGAAACACCGGCAGCG+AGG | + | chr8.1:5364239-5364258 | MS.gene073312:CDS | 60.0% | |
| TAGTTTGAGAGGGCGGCTCC+TGG | + | chr8.1:5361223-5361242 | MS.gene073312:CDS | 60.0% | |
| TGCAGAGCTGGAGAGGATGG+TGG | + | chr8.1:5362147-5362166 | MS.gene073312:CDS | 60.0% | |
| !! | CGGCACCGGTTCCTGAGAAA+TGG | - | chr8.1:5360393-5360412 | None:intergenic | 60.0% |
| !! | GCTGGAGAGGATGGTGGATC+AGG | + | chr8.1:5362153-5362172 | MS.gene073312:CDS | 60.0% |
| GGCGGATCCAACAGAGCCGG+TGG | - | chr8.1:5360329-5360348 | None:intergenic | 70.0% | |
| TGCGCCCTGCCACCGGAGAT+AGG | - | chr8.1:5364431-5364450 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5360323 | 5365019 | 5360323 | ID=MS.gene073312 |
| chr8.1 | mRNA | 5360323 | 5365019 | 5360323 | ID=MS.gene073312.t1;Parent=MS.gene073312 |
| chr8.1 | exon | 5360323 | 5360537 | 5360323 | ID=MS.gene073312.t1.exon1;Parent=MS.gene073312.t1 |
| chr8.1 | CDS | 5360323 | 5360537 | 5360323 | ID=cds.MS.gene073312.t1;Parent=MS.gene073312.t1 |
| chr8.1 | exon | 5361217 | 5361320 | 5361217 | ID=MS.gene073312.t1.exon2;Parent=MS.gene073312.t1 |
| chr8.1 | CDS | 5361217 | 5361320 | 5361217 | ID=cds.MS.gene073312.t1;Parent=MS.gene073312.t1 |
| chr8.1 | exon | 5362119 | 5362295 | 5362119 | ID=MS.gene073312.t1.exon3;Parent=MS.gene073312.t1 |
| chr8.1 | CDS | 5362119 | 5362295 | 5362119 | ID=cds.MS.gene073312.t1;Parent=MS.gene073312.t1 |
| chr8.1 | exon | 5362879 | 5364740 | 5362879 | ID=MS.gene073312.t1.exon4;Parent=MS.gene073312.t1 |
| chr8.1 | CDS | 5362879 | 5364740 | 5362879 | ID=cds.MS.gene073312.t1;Parent=MS.gene073312.t1 |
| chr8.1 | exon | 5364871 | 5365019 | 5364871 | ID=MS.gene073312.t1.exon5;Parent=MS.gene073312.t1 |
| chr8.1 | CDS | 5364871 | 5365019 | 5364871 | ID=cds.MS.gene073312.t1;Parent=MS.gene073312.t1 |
| Gene Sequence |
| Protein sequence |
