Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012389.t1 | XP_003610117.1 | 89.9 | 306 | 25 | 3 | 1 | 305 | 1 | 301 | 9.70E-152 | 546.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012389.t1 | Q8VZP1 | 75.7 | 239 | 57 | 1 | 66 | 303 | 1 | 239 | 2.4e-103 | 376.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012389.t1 | G7JVF5 | 89.9 | 306 | 25 | 3 | 1 | 305 | 1 | 301 | 7.0e-152 | 546.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78610 | MS.gene012389 | PPI |
| MS.gene012389 | MS.gene53154 | PPI |
| MS.gene85927 | MS.gene012389 | PPI |
| MS.gene55353 | MS.gene012389 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012389.t1 | MTR_4g128090 | 89.869 | 306 | 25 | 3 | 1 | 305 | 1 | 301 | 0.0 | 554 |
| MS.gene012389.t1 | MTR_4g091060 | 37.719 | 228 | 135 | 4 | 75 | 302 | 5 | 225 | 4.26e-42 | 146 |
| MS.gene012389.t1 | MTR_4g091060 | 37.719 | 228 | 135 | 4 | 75 | 302 | 5 | 225 | 8.14e-41 | 146 |
| MS.gene012389.t1 | MTR_2g091220 | 37.118 | 229 | 129 | 7 | 78 | 302 | 11 | 228 | 2.61e-34 | 125 |
| MS.gene012389.t1 | MTR_2g091220 | 37.118 | 229 | 129 | 7 | 78 | 302 | 11 | 228 | 3.09e-34 | 125 |
| MS.gene012389.t1 | MTR_2g091220 | 37.555 | 229 | 128 | 8 | 78 | 302 | 11 | 228 | 6.51e-33 | 124 |
| MS.gene012389.t1 | MTR_4g091060 | 40.123 | 162 | 92 | 3 | 141 | 302 | 10 | 166 | 9.35e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012389.t1 | AT5G57440 | 75.732 | 239 | 57 | 1 | 66 | 303 | 1 | 239 | 4.35e-135 | 382 |
| MS.gene012389.t1 | AT4G25840 | 69.057 | 265 | 73 | 1 | 50 | 305 | 34 | 298 | 5.71e-133 | 379 |
| MS.gene012389.t1 | AT4G21470 | 35.345 | 232 | 143 | 4 | 71 | 302 | 4 | 228 | 1.38e-38 | 140 |
Find 63 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGATGCATCATGTTGTTCT+TGG | 0.193950 | 8.3:+3072222 | MS.gene012389:CDS |
| CTAACGACGGTGAGAAATTT+TGG | 0.236357 | 8.3:+3068930 | MS.gene012389:CDS |
| CTTCTCTTTCAACAAGAAAT+TGG | 0.261291 | 8.3:-3069477 | None:intergenic |
| TTACCTCCGTTTGAAGATAA+TGG | 0.266049 | 8.3:+3074223 | MS.gene012389:CDS |
| GTTCCAATTGCCGTGGCAAC+TGG | 0.292460 | 8.3:+3072010 | MS.gene012389:CDS |
| TACCCAGTTGCCACGGCAAT+TGG | 0.323593 | 8.3:-3072013 | None:intergenic |
| GGTTTGCCTTGTTTAACTTC+AGG | 0.330793 | 8.3:-3072252 | None:intergenic |
| AAACGGACCCCAAATTAAAA+AGG | 0.344406 | 8.3:+3068980 | MS.gene012389:CDS |
| GTGTTGTAGGTCTGTTGTTA+TGG | 0.365140 | 8.3:+3074111 | MS.gene012389:intron |
| GTTTGCCTTGTTTAACTTCA+GGG | 0.369613 | 8.3:-3072251 | None:intergenic |
| TCCGTTTAGTTTGCAACCCA+CGG | 0.405786 | 8.3:-3068964 | None:intergenic |
| TGAAAAGATTTGTCCAGCCT+TGG | 0.420947 | 8.3:-3074142 | None:intergenic |
| CCTGGCATGAGCTCGCTTGT+TGG | 0.428334 | 8.3:-3069520 | None:intergenic |
| CCAACACTGGAAAACGGAAA+TGG | 0.447316 | 8.3:-3069079 | None:intergenic |
| TGCTGCAGCCAGGAGATTTG+AGG | 0.448286 | 8.3:+3072293 | MS.gene012389:CDS |
| CAATTTCCATTATCTTCAAA+CGG | 0.456167 | 8.3:-3074229 | None:intergenic |
| CCCGTGGGTTGCAAACTAAA+CGG | 0.459897 | 8.3:+3068963 | MS.gene012389:CDS |
| GCCTCTCAAGGCTAAGATGA+TGG | 0.463820 | 8.3:+3069384 | MS.gene012389:CDS |
| CTCATCTGAGATCGGAATCA+AGG | 0.467475 | 8.3:+3069025 | MS.gene012389:CDS |
| GATTTGTCCAGCCTTGGATC+AGG | 0.474667 | 8.3:-3074136 | None:intergenic |
| ATGTATTTCTTGCTGCAGCC+AGG | 0.492722 | 8.3:+3072283 | MS.gene012389:CDS |
| GACACCGACGGAGGAGGGAT+TGG | 0.493233 | 8.3:-3069123 | None:intergenic |
| CTCAAGCATCTACATGCAAA+AGG | 0.496114 | 8.3:+3071986 | MS.gene012389:CDS |
| GTTCGTGCAGCTAAGAATGC+TGG | 0.496579 | 8.3:+3072554 | MS.gene012389:CDS |
| CCGTTTAGTTTGCAACCCAC+GGG | 0.502450 | 8.3:-3068963 | None:intergenic |
| CCAACAATGAGTTCAAAACT+TGG | 0.503574 | 8.3:-3074177 | None:intergenic |
| CACACACTCTCATCTGAGAT+CGG | 0.504522 | 8.3:+3069017 | MS.gene012389:CDS |
| CCAACAAGCGAGCTCATGCC+AGG | 0.507539 | 8.3:+3069520 | MS.gene012389:CDS |
| GGAGGTAAACTCCACTCACT+AGG | 0.512625 | 8.3:-3074208 | None:intergenic |
| TTGTTATGGTTCCTGATCCA+AGG | 0.516102 | 8.3:+3074125 | MS.gene012389:CDS |
| GCTGCAGCAAGAAATACATC+TGG | 0.528849 | 8.3:-3072279 | None:intergenic |
| TTGCAACCCACGGGCCAAGT+TGG | 0.534164 | 8.3:-3068954 | None:intergenic |
| TATATATACCTCAAATCTCC+TGG | 0.538748 | 8.3:-3072301 | None:intergenic |
| AACTGAAAACGCAAAGACAC+GGG | 0.538812 | 8.3:+3072187 | MS.gene012389:CDS |
| TTCCAATTGCCGTGGCAACT+GGG | 0.540048 | 8.3:+3072011 | MS.gene012389:CDS |
| TATGAGCCAACACTGGAAAA+CGG | 0.542416 | 8.3:-3069085 | None:intergenic |
| TATGGTTCCTGATCCAAGGC+TGG | 0.543162 | 8.3:+3074129 | MS.gene012389:CDS |
| GAAAGCGATTGAAGCTGCTA+AGG | 0.553025 | 8.3:+3069411 | MS.gene012389:CDS |
| TTTGGTCCAACTTGGCCCGT+GGG | 0.555749 | 8.3:+3068948 | MS.gene012389:CDS |
| GAACTGAAAACGCAAAGACA+CGG | 0.557091 | 8.3:+3072186 | MS.gene012389:CDS |
| CCTCTCAAGGCTAAGATGAT+GGG | 0.565000 | 8.3:+3069385 | MS.gene012389:CDS |
| GACATGGACGGTCTCTTGCT+AGG | 0.569041 | 8.3:+3069173 | MS.gene012389:CDS |
| TTTCTGACACCGACGGAGGA+GGG | 0.569799 | 8.3:-3069128 | None:intergenic |
| TGGATTTCAACCCTAGTGAG+TGG | 0.575322 | 8.3:+3074197 | MS.gene012389:CDS |
| AGAATATTACTCGGATCCAC+TGG | 0.577509 | 8.3:-3072506 | None:intergenic |
| TCTTTCAACAAGAAATTGGT+CGG | 0.578381 | 8.3:-3069473 | None:intergenic |
| TGAAATTTACCCAGTTGCCA+CGG | 0.584481 | 8.3:-3072020 | None:intergenic |
| AACGGAAATGGAACCTGCGT+TGG | 0.587374 | 8.3:-3069067 | None:intergenic |
| GAGGTAAACTCCACTCACTA+GGG | 0.599003 | 8.3:-3074207 | None:intergenic |
| GCAAGAAATACATCTGGTGA+TGG | 0.606339 | 8.3:-3072273 | None:intergenic |
| CCCATCATCTTAGCCTTGAG+AGG | 0.607459 | 8.3:-3069385 | None:intergenic |
| TGATCAACAGGGTGGACCAG+TGG | 0.613544 | 8.3:+3072490 | MS.gene012389:intron |
| CTTAGCTGCACGAACTCCAG+AGG | 0.618799 | 8.3:-3072546 | None:intergenic |
| ATGACCAATCCCTCCTCCGT+CGG | 0.624552 | 8.3:+3069119 | MS.gene012389:CDS |
| TTTCCATTATCTTCAAACGG+AGG | 0.628418 | 8.3:-3074226 | None:intergenic |
| TTAGCTGCACGAACTCCAGA+GGG | 0.640809 | 8.3:-3072545 | None:intergenic |
| GCGCTGTTATGAGCCAACAC+TGG | 0.652001 | 8.3:-3069092 | None:intergenic |
| AAAAGGAGTTCCAATTGCCG+TGG | 0.660340 | 8.3:+3072003 | MS.gene012389:CDS |
| GATGACCCTGAAGTTAAACA+AGG | 0.674433 | 8.3:+3072246 | MS.gene012389:CDS |
| TTGAAAGAGAAGATATGCTG+CGG | 0.688166 | 8.3:+3069488 | MS.gene012389:CDS |
| GCTGTTGTCACAACCAACGC+AGG | 0.695668 | 8.3:+3069054 | MS.gene012389:CDS |
| ACTGAAAACGCAAAGACACG+GGG | 0.708609 | 8.3:+3072188 | MS.gene012389:CDS |
| GATAGAGATGAATCTAACGA+CGG | 0.731238 | 8.3:+3068917 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACCAATAAAA+AGG | - | chr8.3:3070255-3070274 | None:intergenic | 10.0% |
| !! | AAAAAAAAAACCAATAAAAA+GGG | - | chr8.3:3070254-3070273 | None:intergenic | 10.0% |
| !!! | TTCTTAAACTTTAATATTTT+TGG | + | chr8.3:3070625-3070644 | MS.gene012389:intron | 10.0% |
| !!! | TTTTATTGATTTGTATAAAT+TGG | + | chr8.3:3069754-3069773 | MS.gene012389:intron | 10.0% |
| !!! | TTTTTATTGGTTTTTTTTTT+TGG | + | chr8.3:3070254-3070273 | MS.gene012389:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070495-3070514 | None:intergenic | 100.0% |
| !! | AATAGTACATGATTAAAAAA+TGG | + | chr8.3:3069660-3069679 | MS.gene012389:intron | 15.0% |
| !! | TGTATATTATTGATATTTAC+CGG | + | chr8.3:3070903-3070922 | MS.gene012389:intron | 15.0% |
| !! | TTGTGAAAAGAATAAAAAAA+GGG | - | chr8.3:3070182-3070201 | None:intergenic | 15.0% |
| !! | TTTATATGCTATGAATTATT+TGG | + | chr8.3:3073712-3073731 | MS.gene012389:intron | 15.0% |
| !!! | ATAGTTTTCTTACTTTTTAA+TGG | + | chr8.3:3070958-3070977 | MS.gene012389:intron | 15.0% |
| !!! | CTTTTACTTTTTCTTTTTTT+GGG | + | chr8.3:3072066-3072085 | MS.gene012389:intron | 15.0% |
| !!! | GTTTTTTAACTAAACATATA+TGG | + | chr8.3:3072618-3072637 | MS.gene012389:intron | 15.0% |
| !!! | TCTTTTACTTTTTCTTTTTT+TGG | + | chr8.3:3072065-3072084 | MS.gene012389:intron | 15.0% |
| !! | AAAACATTTATATGTTTACC+GGG | + | chr8.3:3073092-3073111 | MS.gene012389:intron | 20.0% |
| !! | AAAATAAGTTAAAATAGCGT+TGG | - | chr8.3:3073266-3073285 | None:intergenic | 20.0% |
| !! | AAAATCCAAAAAGAATACAA+AGG | - | chr8.3:3073654-3073673 | None:intergenic | 20.0% |
| !! | AAATGTAATGAAATTGATCA+AGG | - | chr8.3:3074016-3074035 | None:intergenic | 20.0% |
| !! | AATATAAGCAACATTTATAG+TGG | - | chr8.3:3071261-3071280 | None:intergenic | 20.0% |
| !! | ATAAATATTGAACTTTACTC+AGG | + | chr8.3:3071283-3071302 | MS.gene012389:intron | 20.0% |
| !! | ATAGGTAACAAACATTATTA+TGG | - | chr8.3:3073449-3073468 | None:intergenic | 20.0% |
| !! | ATATATAAGTGTTTATTGAG+AGG | - | chr8.3:3073693-3073712 | None:intergenic | 20.0% |
| !! | ATCTCAATATGTAACTAATT+GGG | + | chr8.3:3070727-3070746 | MS.gene012389:intron | 20.0% |
| !! | CAAAACATTTATATGTTTAC+CGG | + | chr8.3:3073091-3073110 | MS.gene012389:intron | 20.0% |
| !! | GATAAGTATTTATGCTATAA+GGG | + | chr8.3:3073395-3073414 | MS.gene012389:intron | 20.0% |
| !! | GTTGTGAAAAGAATAAAAAA+AGG | - | chr8.3:3070183-3070202 | None:intergenic | 20.0% |
| !! | TAAAAGTGAATGTTGATATA+GGG | + | chr8.3:3073149-3073168 | MS.gene012389:intron | 20.0% |
| !! | TAGAATAAGTTTCATTCTTT+CGG | - | chr8.3:3070228-3070247 | None:intergenic | 20.0% |
| !! | TAGGTAACAAACATTATTAT+GGG | - | chr8.3:3073448-3073467 | None:intergenic | 20.0% |
| !! | TCAAAAACAAGAATATTACT+CGG | - | chr8.3:3072518-3072537 | None:intergenic | 20.0% |
| !! | TGATAAGTATTTATGCTATA+AGG | + | chr8.3:3073394-3073413 | MS.gene012389:intron | 20.0% |
| !!! | AAATTTTAACAAATCAGAAG+TGG | - | chr8.3:3070031-3070050 | None:intergenic | 20.0% |
| !!! | ATAATATACATAGAAGTACT+AGG | - | chr8.3:3070893-3070912 | None:intergenic | 20.0% |
| !!! | ATTTCTAGTATTTATTGTGA+AGG | - | chr8.3:3070436-3070455 | None:intergenic | 20.0% |
| !!! | GATACAATAAAACTTTTGAA+TGG | + | chr8.3:3069362-3069381 | MS.gene012389:CDS | 20.0% |
| !!! | TATTCTTTTCACAACTTATA+AGG | + | chr8.3:3070188-3070207 | MS.gene012389:intron | 20.0% |
| ! | AAAAAGATGATGTACAATCA+TGG | - | chr8.3:3072711-3072730 | None:intergenic | 25.0% |
| ! | AAATCACCAATATATCTTTC+TGG | - | chr8.3:3073006-3073025 | None:intergenic | 25.0% |
| ! | AAATGAGAATGAACAACTAT+TGG | - | chr8.3:3070002-3070021 | None:intergenic | 25.0% |
| ! | AACAACCTTTGTGTAAAAAT+AGG | + | chr8.3:3070077-3070096 | MS.gene012389:intron | 25.0% |
| ! | AAGTTGAAACATGCTAAATA+AGG | - | chr8.3:3070842-3070861 | None:intergenic | 25.0% |
| ! | AATGAACCAGAAAGATATAT+TGG | + | chr8.3:3072997-3073016 | MS.gene012389:intron | 25.0% |
| ! | ACAACCTTTGTGTAAAAATA+GGG | + | chr8.3:3070078-3070097 | MS.gene012389:intron | 25.0% |
| ! | ACATCAGCATATAAAAAAAG+TGG | - | chr8.3:3071924-3071943 | None:intergenic | 25.0% |
| ! | ACCTATTATAAATGAAAAGC+AGG | - | chr8.3:3071954-3071973 | None:intergenic | 25.0% |
| ! | ATTCGTAATAAACAGCAAAA+AGG | - | chr8.3:3069261-3069280 | None:intergenic | 25.0% |
| ! | CAATTTCCATTATCTTCAAA+CGG | - | chr8.3:3074232-3074251 | None:intergenic | 25.0% |
| ! | CATCTCAATATGTAACTAAT+TGG | + | chr8.3:3070726-3070745 | MS.gene012389:intron | 25.0% |
| ! | CTAAAAGTGAATGTTGATAT+AGG | + | chr8.3:3073148-3073167 | MS.gene012389:intron | 25.0% |
| ! | TAAAACTTCTTCCTATGTAT+AGG | + | chr8.3:3071216-3071235 | MS.gene012389:intron | 25.0% |
| ! | TTATCCAATAGCTTAATTGA+GGG | - | chr8.3:3070529-3070548 | None:intergenic | 25.0% |
| ! | TTCGTAATAAACAGCAAAAA+GGG | - | chr8.3:3069260-3069279 | None:intergenic | 25.0% |
| ! | TTGAATGTAACTACATTTGT+TGG | + | chr8.3:3069593-3069612 | MS.gene012389:intron | 25.0% |
| ! | TTGTTAAATAGCAGTTATAG+TGG | - | chr8.3:3073898-3073917 | None:intergenic | 25.0% |
| ! | TTTATCCAATAGCTTAATTG+AGG | - | chr8.3:3070530-3070549 | None:intergenic | 25.0% |
| !! | AAATGTTTTGCAGATGAAAT+CGG | - | chr8.3:3073081-3073100 | None:intergenic | 25.0% |
| !! | AGAAAGATATATTGGTGATT+TGG | + | chr8.3:3073005-3073024 | MS.gene012389:intron | 25.0% |
| !! | ATAACTGCTATTTAACAACA+CGG | + | chr8.3:3073900-3073919 | MS.gene012389:intron | 25.0% |
| !! | ATATGGTTTTCTGATTCTAT+TGG | - | chr8.3:3072784-3072803 | None:intergenic | 25.0% |
| !! | ATATGTCTTATTGACTATCA+AGG | + | chr8.3:3069710-3069729 | MS.gene012389:intron | 25.0% |
| !! | ATTAATGACTTTTGTGAACT+TGG | + | chr8.3:3072327-3072346 | MS.gene012389:intron | 25.0% |
| !! | CTTAACCTTTGTATTCTTTT+TGG | + | chr8.3:3073646-3073665 | MS.gene012389:intron | 25.0% |
| !!! | AAAACTGCCTTTTTAATTTG+GGG | - | chr8.3:3068990-3069009 | None:intergenic | 25.0% |
| !!! | ATGTTCTGAAATGTTTATGT+TGG | + | chr8.3:3070993-3071012 | MS.gene012389:intron | 25.0% |
| !!! | ATTTTCCTGGTTTGAATTTA+AGG | + | chr8.3:3072381-3072400 | MS.gene012389:intron | 25.0% |
| !!! | CAACTTCTTTTTGAAGATAT+GGG | + | chr8.3:3071037-3071056 | MS.gene012389:intron | 25.0% |
| !!! | CCAAACTAGTTTGTTTATTA+GGG | + | chr8.3:3071348-3071367 | MS.gene012389:intron | 25.0% |
| !!! | GAAAACTGCCTTTTTAATTT+GGG | - | chr8.3:3068991-3069010 | None:intergenic | 25.0% |
| !!! | GTTTTTAGGGTGTTTATTTT+CGG | + | chr8.3:3071749-3071768 | MS.gene012389:intron | 25.0% |
| !!! | TCCAAACTAGTTTGTTTATT+AGG | + | chr8.3:3071347-3071366 | MS.gene012389:intron | 25.0% |
| !!! | TGAAAACTGCCTTTTTAATT+TGG | - | chr8.3:3068992-3069011 | None:intergenic | 25.0% |
| !!! | TTTTTAGGGTGTTTATTTTC+GGG | + | chr8.3:3071750-3071769 | MS.gene012389:intron | 25.0% |
| AAAATATGAATCTCAGAAGC+TGG | + | chr8.3:3073491-3073510 | MS.gene012389:intron | 30.0% | |
| AAATATGAATCTCAGAAGCT+GGG | + | chr8.3:3073492-3073511 | MS.gene012389:intron | 30.0% | |
| AACATTATTATGGGTCTGTT+TGG | - | chr8.3:3073439-3073458 | None:intergenic | 30.0% | |
| ACTAGTGTGTGAATGTTATA+TGG | - | chr8.3:3072801-3072820 | None:intergenic | 30.0% | |
| AGATATGTCTTCATATATGC+CGG | - | chr8.3:3070925-3070944 | None:intergenic | 30.0% | |
| CCCTAATAAACAAACTAGTT+TGG | - | chr8.3:3071351-3071370 | None:intergenic | 30.0% | |
| CTTCTCTTTCAACAAGAAAT+TGG | - | chr8.3:3069480-3069499 | None:intergenic | 30.0% | |
| CTTTGTGTAAAAATAGGGTA+AGG | + | chr8.3:3070083-3070102 | MS.gene012389:intron | 30.0% | |
| GAAATTGAGGATACAAACAA+AGG | - | chr8.3:3071796-3071815 | None:intergenic | 30.0% | |
| GCTGGTAAATATTATCAACT+GGG | - | chr8.3:3073589-3073608 | None:intergenic | 30.0% | |
| GTGTATTAATTCCATTTACC+TGG | - | chr8.3:3069541-3069560 | None:intergenic | 30.0% | |
| TAAATGTGCTTTCTATACCA+CGG | - | chr8.3:3072910-3072929 | None:intergenic | 30.0% | |
| TAATGAAATTGATCAAGGTG+AGG | - | chr8.3:3074011-3074030 | None:intergenic | 30.0% | |
| TATATATACCTCAAATCTCC+TGG | - | chr8.3:3072304-3072323 | None:intergenic | 30.0% | |
| TATCCAATAGCTTAATTGAG+GGG | - | chr8.3:3070528-3070547 | None:intergenic | 30.0% | |
| TCTTTCAACAAGAAATTGGT+CGG | - | chr8.3:3069476-3069495 | None:intergenic | 30.0% | |
| TTCATAACATAAACATACCG+TGG | + | chr8.3:3072890-3072909 | MS.gene012389:intron | 30.0% | |
| TTGTCAAATATCTGTTACAG+TGG | - | chr8.3:3073802-3073821 | None:intergenic | 30.0% | |
| ! | ACTTTTAGTATATTCGAGAG+AGG | - | chr8.3:3073136-3073155 | None:intergenic | 30.0% |
| ! | AGAAAGCACATTTAGTAGAA+TGG | + | chr8.3:3072916-3072935 | MS.gene012389:intron | 30.0% |
| ! | ATGCAAAACAATTTGAGATG+CGG | - | chr8.3:3071106-3071125 | None:intergenic | 30.0% |
| ! | CTTTTAGTATATTCGAGAGA+GGG | - | chr8.3:3073135-3073154 | None:intergenic | 30.0% |
| ! | GAAAGCACATTTAGTAGAAT+GGG | + | chr8.3:3072917-3072936 | MS.gene012389:intron | 30.0% |
| ! | GAAGTCTGATTCAATACTTT+TGG | + | chr8.3:3070659-3070678 | MS.gene012389:intron | 30.0% |
| ! | GTTTGTTACCTATGTATATG+AGG | + | chr8.3:3073456-3073475 | MS.gene012389:intron | 30.0% |
| ! | TATTCTAGCACCCTTTTTAT+TGG | + | chr8.3:3070241-3070260 | MS.gene012389:intron | 30.0% |
| ! | TCTAGTCGTATATTTTGTGT+AGG | + | chr8.3:3070407-3070426 | MS.gene012389:intron | 30.0% |
| ! | TTTTAACAAATCAGAAGTGG+AGG | - | chr8.3:3070028-3070047 | None:intergenic | 30.0% |
| ! | TTTTTACGCCTCATATACAT+AGG | - | chr8.3:3073467-3073486 | None:intergenic | 30.0% |
| !! | AAAGAATTTGTTACGAGTAC+AGG | - | chr8.3:3073049-3073068 | None:intergenic | 30.0% |
| !! | AATGTTTATGTTGGTTTGCT+TGG | + | chr8.3:3071002-3071021 | MS.gene012389:intron | 30.0% |
| !! | ATATACATAGAAGTACTAGG+TGG | - | chr8.3:3070890-3070909 | None:intergenic | 30.0% |
| !! | ATGTGCGTTTTGTTATATGT+AGG | + | chr8.3:3069919-3069938 | MS.gene012389:intron | 30.0% |
| !! | GATATCGTTTTTACAGTTGT+CGG | + | chr8.3:3071664-3071683 | MS.gene012389:intron | 30.0% |
| !! | GCAACTTCTTTTTGAAGATA+TGG | + | chr8.3:3071036-3071055 | MS.gene012389:intron | 30.0% |
| !! | GCCTGCTTTTCATTTATAAT+AGG | + | chr8.3:3071950-3071969 | MS.gene012389:intron | 30.0% |
| !! | TTGGTTTGCTTGGTATATAT+TGG | + | chr8.3:3071012-3071031 | MS.gene012389:intron | 30.0% |
| !!! | CTTACCCTATTTTTACACAA+AGG | - | chr8.3:3070085-3070104 | None:intergenic | 30.0% |
| !!! | TTTAGGGGTGTTTTTTCTTT+GGG | + | chr8.3:3071616-3071635 | MS.gene012389:intron | 30.0% |
| !!! | TTTTAGGGGTGTTTTTTCTT+TGG | + | chr8.3:3071615-3071634 | MS.gene012389:intron | 30.0% |
| AAACGGACCCCAAATTAAAA+AGG | + | chr8.3:3068980-3068999 | MS.gene012389:CDS | 35.0% | |
| ACCAAAGAGAACCTATACAT+AGG | - | chr8.3:3071230-3071249 | None:intergenic | 35.0% | |
| ACCCTGTATTACTACATGTT+CGG | + | chr8.3:3072973-3072992 | MS.gene012389:intron | 35.0% | |
| ACCGAACATGTAGTAATACA+GGG | - | chr8.3:3072977-3072996 | None:intergenic | 35.0% | |
| ACGCTGCATTATGATATTTG+TGG | + | chr8.3:3070773-3070792 | MS.gene012389:intron | 35.0% | |
| ACTTATTTGAGCTTATCCAC+TGG | + | chr8.3:3073185-3073204 | MS.gene012389:intron | 35.0% | |
| AGATGATGTACAATCATGGA+TGG | - | chr8.3:3072707-3072726 | None:intergenic | 35.0% | |
| AGGAATGAGTGGTAAGAAAT+TGG | - | chr8.3:3073991-3074010 | None:intergenic | 35.0% | |
| ATAACATAAAGACCGTGGAA+TGG | - | chr8.3:3073527-3073546 | None:intergenic | 35.0% | |
| ATATTGAGCAGCTAGTATGT+TGG | - | chr8.3:3072867-3072886 | None:intergenic | 35.0% | |
| ATCCAATAGCTTAATTGAGG+GGG | - | chr8.3:3070527-3070546 | None:intergenic | 35.0% | |
| ATGTTGATATAGGGTCTGTT+TGG | + | chr8.3:3073158-3073177 | MS.gene012389:intron | 35.0% | |
| CCAACAATGAGTTCAAAACT+TGG | - | chr8.3:3074180-3074199 | None:intergenic | 35.0% | |
| CGGTCTTTATGTTATTGCAA+TGG | + | chr8.3:3073532-3073551 | MS.gene012389:intron | 35.0% | |
| CGTATACAAATAGCGTATCA+CGG | + | chr8.3:3073825-3073844 | MS.gene012389:intron | 35.0% | |
| GACAAAAAAGTAACACGAGA+TGG | - | chr8.3:3072047-3072066 | None:intergenic | 35.0% | |
| GATCACAAACTCAACAAAGT+TGG | - | chr8.3:3072436-3072455 | None:intergenic | 35.0% | |
| GATGATGTACAATCATGGAT+GGG | - | chr8.3:3072706-3072725 | None:intergenic | 35.0% | |
| GGCTGGTAAATATTATCAAC+TGG | - | chr8.3:3073590-3073609 | None:intergenic | 35.0% | |
| GGTATTGTAGACTCAAACTT+AGG | + | chr8.3:3071304-3071323 | MS.gene012389:intron | 35.0% | |
| TACCGAACATGTAGTAATAC+AGG | - | chr8.3:3072978-3072997 | None:intergenic | 35.0% | |
| TCAAAAACGACATGTGTGAT+TGG | - | chr8.3:3069155-3069174 | None:intergenic | 35.0% | |
| TCATATCAGTGCTTATGTCT+AGG | - | chr8.3:3073377-3073396 | None:intergenic | 35.0% | |
| TCCTATGTATAGGTTCTCTT+TGG | + | chr8.3:3071226-3071245 | MS.gene012389:intron | 35.0% | |
| TGCAGATAAATTGAAAGCTC+TGG | + | chr8.3:3069636-3069655 | MS.gene012389:intron | 35.0% | |
| TTACCTCCGTTTGAAGATAA+TGG | + | chr8.3:3074223-3074242 | MS.gene012389:CDS | 35.0% | |
| TTCAAAAATTCCACGCAGAA+AGG | - | chr8.3:3071072-3071091 | None:intergenic | 35.0% | |
| TTGAAAGAGAAGATATGCTG+CGG | + | chr8.3:3069488-3069507 | MS.gene012389:CDS | 35.0% | |
| TTGCAATAACATAAAGACCG+TGG | - | chr8.3:3073532-3073551 | None:intergenic | 35.0% | |
| TTTCCATTATCTTCAAACGG+AGG | - | chr8.3:3074229-3074248 | None:intergenic | 35.0% | |
| ! | AAGGTTTTTGTTGAAGAGAC+TGG | + | chr8.3:3069430-3069449 | MS.gene012389:CDS | 35.0% |
| ! | ACGATACATTGATGATCAAC+AGG | + | chr8.3:3072478-3072497 | MS.gene012389:intron | 35.0% |
| ! | AGATCACAAATGCATTTTCC+TGG | + | chr8.3:3072368-3072387 | MS.gene012389:intron | 35.0% |
| ! | ATGATCTGCTGTTTGTAATG+GGG | + | chr8.3:3071148-3071167 | MS.gene012389:intron | 35.0% |
| ! | CACATACTAAAGTACTTGCA+TGG | - | chr8.3:3071419-3071438 | None:intergenic | 35.0% |
| ! | CGATACATTGATGATCAACA+GGG | + | chr8.3:3072479-3072498 | MS.gene012389:intron | 35.0% |
| ! | CTGTAATTCTTCTTTTGCTC+TGG | + | chr8.3:3070685-3070704 | MS.gene012389:intron | 35.0% |
| ! | GATGATCTGCTGTTTGTAAT+GGG | + | chr8.3:3071147-3071166 | MS.gene012389:intron | 35.0% |
| ! | TGATGATCTGCTGTTTGTAA+TGG | + | chr8.3:3071146-3071165 | MS.gene012389:intron | 35.0% |
| ! | TGCATTTCACTGATTGCATT+TGG | - | chr8.3:3073611-3073630 | None:intergenic | 35.0% |
| ! | TTTACACAAAGGTTGTTTCC+AGG | - | chr8.3:3070074-3070093 | None:intergenic | 35.0% |
| !! | AAGTTTTAATCTTGCGCACT+TGG | - | chr8.3:3071204-3071223 | None:intergenic | 35.0% |
| !! | AGCTCTAAGGTTTCAATTTG+AGG | - | chr8.3:3070801-3070820 | None:intergenic | 35.0% |
| !! | AGCTGAATGATCTTTTGGTT+AGG | + | chr8.3:3071543-3071562 | MS.gene012389:intron | 35.0% |
| !! | CTTATTTTCATAAGCTCTCC+AGG | + | chr8.3:3073278-3073297 | MS.gene012389:intron | 35.0% |
| !! | GTTTGCCTTGTTTAACTTCA+GGG | - | chr8.3:3072254-3072273 | None:intergenic | 35.0% |
| !! | TCTTTTGGTTAGGAGTTTAG+CGG | + | chr8.3:3071553-3071572 | MS.gene012389:intron | 35.0% |
| !! | TGAGAAATTTTGGTCCAACT+TGG | + | chr8.3:3068940-3068959 | MS.gene012389:CDS | 35.0% |
| !!! | ATGTTCATGTTTTCAAGTCC+TGG | + | chr8.3:3070053-3070072 | MS.gene012389:intron | 35.0% |
| !!! | CCAAGTTTTGAACTCATTGT+TGG | + | chr8.3:3074177-3074196 | MS.gene012389:CDS | 35.0% |
| !!! | CTTTTTTTGGTTTCTCTCGA+TGG | + | chr8.3:3071497-3071516 | MS.gene012389:intron | 35.0% |
| !!! | GTTTGGTTTTGGGCTTTTTT+TGG | + | chr8.3:3071484-3071503 | MS.gene012389:intron | 35.0% |
| !!! | TTAGGGGTGTTTTTTCTTTG+GGG | + | chr8.3:3071617-3071636 | MS.gene012389:intron | 35.0% |
| !!! | TTTGGCTCAAGTTTGGTTTT+GGG | + | chr8.3:3071474-3071493 | MS.gene012389:intron | 35.0% |
| AACACTTAGCGCATAGAAGA+TGG | - | chr8.3:3069825-3069844 | None:intergenic | 40.0% | |
| AACTGAAAACGCAAAGACAC+GGG | + | chr8.3:3072187-3072206 | MS.gene012389:CDS | 40.0% | |
| ACAGCTACATAACCGTTTGA+TGG | - | chr8.3:3070356-3070375 | None:intergenic | 40.0% | |
| ACTACTGATAACCGCAACTA+AGG | + | chr8.3:3072756-3072775 | MS.gene012389:intron | 40.0% | |
| AGAATATTACTCGGATCCAC+TGG | - | chr8.3:3072509-3072528 | None:intergenic | 40.0% | |
| AGTTGCGGTTATCAGTAGTT+AGG | - | chr8.3:3072755-3072774 | None:intergenic | 40.0% | |
| CAAATTCCACTACGCTATAG+CGG | + | chr8.3:3073865-3073884 | MS.gene012389:intron | 40.0% | |
| CAAGAAGGAACATGATCGAT+TGG | + | chr8.3:3070303-3070322 | MS.gene012389:intron | 40.0% | |
| CAATCGATCATGTTCCTTCT+TGG | - | chr8.3:3070305-3070324 | None:intergenic | 40.0% | |
| CATCCATGTTCTCCATCAAA+CGG | + | chr8.3:3070341-3070360 | MS.gene012389:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8.3:3070109-3070128 | MS.gene012389:intron | 40.0% | |
| CTCAAGCATCTACATGCAAA+AGG | + | chr8.3:3071986-3072005 | MS.gene012389:CDS | 40.0% | |
| CTGATGCATCATGTTGTTCT+TGG | + | chr8.3:3072222-3072241 | MS.gene012389:CDS | 40.0% | |
| GAACTGAAAACGCAAAGACA+CGG | + | chr8.3:3072186-3072205 | MS.gene012389:CDS | 40.0% | |
| GATGACCCTGAAGTTAAACA+AGG | + | chr8.3:3072246-3072265 | MS.gene012389:CDS | 40.0% | |
| GCAAGAAATACATCTGGTGA+TGG | - | chr8.3:3072276-3072295 | None:intergenic | 40.0% | |
| GCTGTTCTCAAAAACTAACC+TGG | - | chr8.3:3073299-3073318 | None:intergenic | 40.0% | |
| GCTTGTCACATTGAAAAGAC+AGG | + | chr8.3:3071381-3071400 | MS.gene012389:intron | 40.0% | |
| GTGCAAGTACTTCAGTTCTT+TGG | + | chr8.3:3071456-3071475 | MS.gene012389:intron | 40.0% | |
| GTGTTGTAGGTCTGTTGTTA+TGG | + | chr8.3:3074111-3074130 | MS.gene012389:intron | 40.0% | |
| GTGTTGTCAATCACAGATAG+CGG | + | chr8.3:3073740-3073759 | MS.gene012389:intron | 40.0% | |
| GTTGCGTACAATACACCAAA+TGG | + | chr8.3:3070105-3070124 | MS.gene012389:intron | 40.0% | |
| GTTTGTATCCTCAATTTCGC+CGG | + | chr8.3:3071798-3071817 | MS.gene012389:intron | 40.0% | |
| TAAACACCCTAAAAACACCC+TGG | - | chr8.3:3071745-3071764 | None:intergenic | 40.0% | |
| TAACCGTTTGATGGAGAACA+TGG | - | chr8.3:3070347-3070366 | None:intergenic | 40.0% | |
| TATGAGCCAACACTGGAAAA+CGG | - | chr8.3:3069088-3069107 | None:intergenic | 40.0% | |
| TCCAATAGCTTAATTGAGGG+GGG | - | chr8.3:3070526-3070545 | None:intergenic | 40.0% | |
| TGAAAAGATTTGTCCAGCCT+TGG | - | chr8.3:3074145-3074164 | None:intergenic | 40.0% | |
| TGAAATTTACCCAGTTGCCA+CGG | - | chr8.3:3072023-3072042 | None:intergenic | 40.0% | |
| TTAACAACACGGTTTGAGCT+AGG | + | chr8.3:3073911-3073930 | MS.gene012389:intron | 40.0% | |
| TTGTTATGGTTCCTGATCCA+AGG | + | chr8.3:3074125-3074144 | MS.gene012389:CDS | 40.0% | |
| TTGTTTGTCACACGTGTTGT+AGG | + | chr8.3:3074098-3074117 | MS.gene012389:intron | 40.0% | |
| ! | AACTTTTGAATGGCCTCTCA+AGG | + | chr8.3:3069372-3069391 | MS.gene012389:CDS | 40.0% |
| ! | CCAAAGTGTTCAACTCAACA+AGG | - | chr8.3:3070572-3070591 | None:intergenic | 40.0% |
| ! | CCTGGTTTGAATTTAAGGCT+GGG | + | chr8.3:3072386-3072405 | MS.gene012389:intron | 40.0% |
| ! | CTAACGACGGTGAGAAATTT+TGG | + | chr8.3:3068930-3068949 | MS.gene012389:CDS | 40.0% |
| ! | CTTTTGCTCTGGTGAAATCT+TGG | + | chr8.3:3070696-3070715 | MS.gene012389:intron | 40.0% |
| ! | GTGGAAGCTGAATGATCTTT+TGG | + | chr8.3:3071538-3071557 | MS.gene012389:intron | 40.0% |
| ! | TACATTGATGATCAACAGGG+TGG | + | chr8.3:3072482-3072501 | MS.gene012389:intron | 40.0% |
| ! | TCAGTTCTTTGGCTCAAGTT+TGG | + | chr8.3:3071467-3071486 | MS.gene012389:intron | 40.0% |
| ! | TCCTGGTTTGAATTTAAGGC+TGG | + | chr8.3:3072385-3072404 | MS.gene012389:intron | 40.0% |
| ! | TTAGGAGGTGACGTGTATTT+TGG | + | chr8.3:3071706-3071725 | MS.gene012389:intron | 40.0% |
| ! | TTCGTGAAGGAGTCTGTTTT+AGG | + | chr8.3:3071688-3071707 | MS.gene012389:intron | 40.0% |
| ! | TTCTATTGGTGCCTTAGTTG+CGG | - | chr8.3:3072770-3072789 | None:intergenic | 40.0% |
| ! | TTTCACTGATTGCATTTGGC+TGG | - | chr8.3:3073607-3073626 | None:intergenic | 40.0% |
| ! | TTTGGTTTCTCTCGATGGAT+CGG | + | chr8.3:3071502-3071521 | MS.gene012389:intron | 40.0% |
| ! | TTTTCAGTATGCCTTCTGCA+AGG | - | chr8.3:3069892-3069911 | None:intergenic | 40.0% |
| !! | ACGGGGGTTTTATCTTTTAG+GGG | + | chr8.3:3071601-3071620 | MS.gene012389:intron | 40.0% |
| !! | AGAATAAAAAAAGGGCACCC+CGG | - | chr8.3:3070174-3070193 | None:intergenic | 40.0% |
| !! | CCTTGTTGAGTTGAACACTT+TGG | + | chr8.3:3070569-3070588 | MS.gene012389:intron | 40.0% |
| !! | CTTTGGCTCAAGTTTGGTTT+TGG | + | chr8.3:3071473-3071492 | MS.gene012389:intron | 40.0% |
| !! | GACGGGGGTTTTATCTTTTA+GGG | + | chr8.3:3071600-3071619 | MS.gene012389:intron | 40.0% |
| !! | GGTTTGCCTTGTTTAACTTC+AGG | - | chr8.3:3072255-3072274 | None:intergenic | 40.0% |
| !!! | CACACATGTCGTTTTTGACA+TGG | + | chr8.3:3069157-3069176 | MS.gene012389:CDS | 40.0% |
| !!! | CATGTCGTTTTTGACATGGA+CGG | + | chr8.3:3069161-3069180 | MS.gene012389:CDS | 40.0% |
| !!! | TAGGGGTGTTTTTTCTTTGG+GGG | + | chr8.3:3071618-3071637 | MS.gene012389:intron | 40.0% |
| AAAAGGAGTTCCAATTGCCG+TGG | + | chr8.3:3072003-3072022 | MS.gene012389:CDS | 45.0% | |
| AATAGCTTAATTGAGGGGGG+GGG | - | chr8.3:3070523-3070542 | None:intergenic | 45.0% | |
| ACTGAAAACGCAAAGACACG+GGG | + | chr8.3:3072188-3072207 | MS.gene012389:CDS | 45.0% | |
| AGATTCCACGCTTTCCAAGA+AGG | + | chr8.3:3070288-3070307 | MS.gene012389:intron | 45.0% | |
| AGCGTATCACGGAACAATAG+CGG | + | chr8.3:3073836-3073855 | MS.gene012389:intron | 45.0% | |
| ATGTATTTCTTGCTGCAGCC+AGG | + | chr8.3:3072283-3072302 | MS.gene012389:CDS | 45.0% | |
| ATGTTCCTTCTTGGAAAGCG+TGG | - | chr8.3:3070296-3070315 | None:intergenic | 45.0% | |
| CAATAGCTTAATTGAGGGGG+GGG | - | chr8.3:3070524-3070543 | None:intergenic | 45.0% | |
| CATCATAACCGAGTGTTCTG+AGG | - | chr8.3:3073955-3073974 | None:intergenic | 45.0% | |
| CCAACACTGGAAAACGGAAA+TGG | - | chr8.3:3069082-3069101 | None:intergenic | 45.0% | |
| CCAATAGCTTAATTGAGGGG+GGG | - | chr8.3:3070525-3070544 | None:intergenic | 45.0% | |
| CCCAGCCTTAAATTCAAACC+AGG | - | chr8.3:3072389-3072408 | None:intergenic | 45.0% | |
| CCTCTCAAGGCTAAGATGAT+GGG | + | chr8.3:3069385-3069404 | MS.gene012389:CDS | 45.0% | |
| CTTGCATGTGCTTATACCAG+TGG | - | chr8.3:3073204-3073223 | None:intergenic | 45.0% | |
| GAAAGCGATTGAAGCTGCTA+AGG | + | chr8.3:3069411-3069430 | MS.gene012389:CDS | 45.0% | |
| GAGGTAAACTCCACTCACTA+GGG | - | chr8.3:3074210-3074229 | None:intergenic | 45.0% | |
| GCAAGAGAATTGAAAGAGCC+CGG | - | chr8.3:3073113-3073132 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8.3:3070108-3070127 | MS.gene012389:intron | 45.0% | |
| GCTGCAGCAAGAAATACATC+TGG | - | chr8.3:3072282-3072301 | None:intergenic | 45.0% | |
| GGGATGTTGAATCCATTCCA+CGG | + | chr8.3:3073512-3073531 | MS.gene012389:intron | 45.0% | |
| GTGTAGAATTCCTTTCTGCG+TGG | + | chr8.3:3071059-3071078 | MS.gene012389:intron | 45.0% | |
| TCGGGTGTTCCGCTTATATA+CGG | + | chr8.3:3071768-3071787 | MS.gene012389:intron | 45.0% | |
| TGACTTCAGAGCAAGCTCTA+AGG | - | chr8.3:3070814-3070833 | None:intergenic | 45.0% | |
| TGATCAAGGTGAGGAATGAG+TGG | - | chr8.3:3074002-3074021 | None:intergenic | 45.0% | |
| TGGATTTCAACCCTAGTGAG+TGG | + | chr8.3:3074197-3074216 | MS.gene012389:CDS | 45.0% | |
| ! | AATGTCGCTTGTGAGAACTG+TGG | - | chr8.3:3072164-3072183 | None:intergenic | 45.0% |
| ! | ATGTCGCTTGTGAGAACTGT+GGG | - | chr8.3:3072163-3072182 | None:intergenic | 45.0% |
| ! | CACACACTCTCATCTGAGAT+CGG | + | chr8.3:3069017-3069036 | MS.gene012389:CDS | 45.0% |
| ! | CCATTTCCGTTTTCCAGTGT+TGG | + | chr8.3:3069079-3069098 | MS.gene012389:CDS | 45.0% |
| ! | CTCATCTGAGATCGGAATCA+AGG | + | chr8.3:3069025-3069044 | MS.gene012389:CDS | 45.0% |
| !! | ACAAAGGCGCCGTATATAAG+CGG | - | chr8.3:3071780-3071799 | None:intergenic | 45.0% |
| !! | CTCAACTTTGGTGTTCAGGA+CGG | + | chr8.3:3071582-3071601 | MS.gene012389:intron | 45.0% |
| !! | GGACGGGGGTTTTATCTTTT+AGG | + | chr8.3:3071599-3071618 | MS.gene012389:intron | 45.0% |
| !! | GTGAAGGAGTCTGTTTTAGG+AGG | + | chr8.3:3071691-3071710 | MS.gene012389:intron | 45.0% |
| !! | TACAGTTGTCGGTTTCGTGA+AGG | + | chr8.3:3071675-3071694 | MS.gene012389:intron | 45.0% |
| !! | TCAACTTTGGTGTTCAGGAC+GGG | + | chr8.3:3071583-3071602 | MS.gene012389:intron | 45.0% |
| !! | TCCGTTTAGTTTGCAACCCA+CGG | - | chr8.3:3068967-3068986 | None:intergenic | 45.0% |
| !! | TGTCTTTGAGACCTTGCAGA+AGG | + | chr8.3:3069878-3069897 | MS.gene012389:intron | 45.0% |
| !! | TGTTGGTGTCAGACAAGTGT+CGG | + | chr8.3:3069610-3069629 | MS.gene012389:intron | 45.0% |
| !!! | GAGGTGACGTGTATTTTGGT+GGG | + | chr8.3:3071710-3071729 | MS.gene012389:intron | 45.0% |
| !!! | GATTGGTTTTCTGACACCGA+CGG | - | chr8.3:3069138-3069157 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTACA+TGG | + | chr8.3:3069219-3069238 | MS.gene012389:intron | 5.0% |
| AACAGAGACCGGCGAAATTG+AGG | - | chr8.3:3071809-3071828 | None:intergenic | 50.0% | |
| AACGGAAATGGAACCTGCGT+TGG | - | chr8.3:3069070-3069089 | None:intergenic | 50.0% | |
| ACACCCTAAAAACACCCTGG+AGG | - | chr8.3:3071742-3071761 | None:intergenic | 50.0% | |
| ACTAAAGCTTCCGCATACGC+AGG | - | chr8.3:3070148-3070167 | None:intergenic | 50.0% | |
| ATAGCTTAATTGAGGGGGGG+GGG | - | chr8.3:3070522-3070541 | None:intergenic | 50.0% | |
| CAACACGGTTTGAGCTAGGA+TGG | + | chr8.3:3073915-3073934 | MS.gene012389:intron | 50.0% | |
| CCCCCCCTCAATTAAGCTAT+TGG | + | chr8.3:3070522-3070541 | MS.gene012389:intron | 50.0% | |
| CTAAAGCTTCCGCATACGCA+GGG | - | chr8.3:3070147-3070166 | None:intergenic | 50.0% | |
| GAGTAGTGACGATGGATGGT+TGG | + | chr8.3:3071642-3071661 | MS.gene012389:intron | 50.0% | |
| GATTTGTCCAGCCTTGGATC+AGG | - | chr8.3:3074139-3074158 | None:intergenic | 50.0% | |
| GCCTCTCAAGGCTAAGATGA+TGG | + | chr8.3:3069384-3069403 | MS.gene012389:CDS | 50.0% | |
| GCTATACCGCTATAGCGTAG+TGG | - | chr8.3:3073874-3073893 | None:intergenic | 50.0% | |
| GCTATAGCACTACTGCGTAG+TGG | - | chr8.3:3073778-3073797 | None:intergenic | 50.0% | |
| GGAGGTAAACTCCACTCACT+AGG | - | chr8.3:3074211-3074230 | None:intergenic | 50.0% | |
| GTCTCTGTTCGTCTTGAGCA+AGG | + | chr8.3:3071820-3071839 | MS.gene012389:intron | 50.0% | |
| GTGTGTTGCCTCAGAACACT+CGG | + | chr8.3:3073944-3073963 | MS.gene012389:intron | 50.0% | |
| GTTCGTCTTGAGCAAGGATC+AGG | + | chr8.3:3071826-3071845 | MS.gene012389:intron | 50.0% | |
| GTTCGTGCAGCTAAGAATGC+TGG | + | chr8.3:3072554-3072573 | MS.gene012389:CDS | 50.0% | |
| TATGGTTCCTGATCCAAGGC+TGG | + | chr8.3:3074129-3074148 | MS.gene012389:CDS | 50.0% | |
| TGCTCAAGACGAACAGAGAC+CGG | - | chr8.3:3071820-3071839 | None:intergenic | 50.0% | |
| TTAGCTGCACGAACTCCAGA+GGG | - | chr8.3:3072548-3072567 | None:intergenic | 50.0% | |
| TTCCAATTGCCGTGGCAACT+GGG | + | chr8.3:3072011-3072030 | MS.gene012389:CDS | 50.0% | |
| ! | ATGCGGAAGCTTTAGTGCAC+CGG | + | chr8.3:3070152-3070171 | MS.gene012389:intron | 50.0% |
| ! | CCCGTGGGTTGCAAACTAAA+CGG | + | chr8.3:3068963-3068982 | MS.gene012389:CDS | 50.0% |
| ! | GGTTAGGAGTTTAGCGGATG+TGG | + | chr8.3:3071559-3071578 | MS.gene012389:intron | 50.0% |
| ! | TAGCGGATGTGGCTCAACTT+TGG | + | chr8.3:3071570-3071589 | MS.gene012389:intron | 50.0% |
| ! | TGTCGCTTGTGAGAACTGTG+GGG | - | chr8.3:3072162-3072181 | None:intergenic | 50.0% |
| !! | AACTTTGGTGTTCAGGACGG+GGG | + | chr8.3:3071585-3071604 | MS.gene012389:intron | 50.0% |
| !! | AGGTCCTCCAGGGTGTTTTT+AGG | + | chr8.3:3071735-3071754 | MS.gene012389:intron | 50.0% |
| !! | CAACTTTGGTGTTCAGGACG+GGG | + | chr8.3:3071584-3071603 | MS.gene012389:intron | 50.0% |
| !! | CCCATCATCTTAGCCTTGAG+AGG | - | chr8.3:3069388-3069407 | None:intergenic | 50.0% |
| !! | CCGTTTAGTTTGCAACCCAC+GGG | - | chr8.3:3068966-3068985 | None:intergenic | 50.0% |
| !! | GGAGGTGACGTGTATTTTGG+TGG | + | chr8.3:3071709-3071728 | MS.gene012389:intron | 50.0% |
| !! | GGTCCTCCAGGGTGTTTTTA+GGG | + | chr8.3:3071736-3071755 | MS.gene012389:intron | 50.0% |
| !! | GTGGCTCAACTTTGGTGTTC+AGG | + | chr8.3:3071578-3071597 | MS.gene012389:intron | 50.0% |
| !! | GTTTTTGAAGACGCACCCTC+TGG | + | chr8.3:3072530-3072549 | MS.gene012389:CDS | 50.0% |
| !!! | GACGTGTATTTTGGTGGGTG+AGG | + | chr8.3:3071715-3071734 | MS.gene012389:intron | 50.0% |
| ATGACCAATCCCTCCTCCGT+CGG | + | chr8.3:3069119-3069138 | MS.gene012389:CDS | 55.0% | |
| ATGGATCGGAGGATGAGAGG+TGG | + | chr8.3:3071516-3071535 | MS.gene012389:intron | 55.0% | |
| CTTAGCTGCACGAACTCCAG+AGG | - | chr8.3:3072549-3072568 | None:intergenic | 55.0% | |
| GACATGGACGGTCTCTTGCT+AGG | + | chr8.3:3069173-3069192 | MS.gene012389:CDS | 55.0% | |
| GCGAGCTCATGCCAGGTAAA+TGG | + | chr8.3:3069527-3069546 | MS.gene012389:intron | 55.0% | |
| GCGCTGTTATGAGCCAACAC+TGG | - | chr8.3:3069095-3069114 | None:intergenic | 55.0% | |
| GCTGTTGTCACAACCAACGC+AGG | + | chr8.3:3069054-3069073 | MS.gene012389:CDS | 55.0% | |
| GGGTGAGTAGTGACGATGGA+TGG | + | chr8.3:3071638-3071657 | MS.gene012389:intron | 55.0% | |
| GGTTTCTCTCGATGGATCGG+AGG | + | chr8.3:3071505-3071524 | MS.gene012389:intron | 55.0% | |
| GTTCCAATTGCCGTGGCAAC+TGG | + | chr8.3:3072010-3072029 | MS.gene012389:CDS | 55.0% | |
| TACCCAGTTGCCACGGCAAT+TGG | - | chr8.3:3072016-3072035 | None:intergenic | 55.0% | |
| TAGCTTAATTGAGGGGGGGG+GGG | - | chr8.3:3070521-3070540 | None:intergenic | 55.0% | |
| TCGATGGATCGGAGGATGAG+AGG | + | chr8.3:3071513-3071532 | MS.gene012389:intron | 55.0% | |
| TGATCAACAGGGTGGACCAG+TGG | + | chr8.3:3072490-3072509 | MS.gene012389:intron | 55.0% | |
| TGCTGCAGCCAGGAGATTTG+AGG | + | chr8.3:3072293-3072312 | MS.gene012389:CDS | 55.0% | |
| TTGGGGGTGAGTAGTGACGA+TGG | + | chr8.3:3071634-3071653 | MS.gene012389:intron | 55.0% | |
| TTTCTGACACCGACGGAGGA+GGG | - | chr8.3:3069131-3069150 | None:intergenic | 55.0% | |
| TTTGGTCCAACTTGGCCCGT+GGG | + | chr8.3:3068948-3068967 | MS.gene012389:CDS | 55.0% | |
| ! | TGCGGAAGCTTTAGTGCACC+GGG | + | chr8.3:3070153-3070172 | MS.gene012389:intron | 55.0% |
| ! | TGGTTTTCTGACACCGACGG+AGG | - | chr8.3:3069135-3069154 | None:intergenic | 55.0% |
| ! | TTTTCTGACACCGACGGAGG+AGG | - | chr8.3:3069132-3069151 | None:intergenic | 55.0% |
| ! | TTTTGGTCCAACTTGGCCCG+TGG | + | chr8.3:3068947-3068966 | MS.gene012389:CDS | 55.0% |
| AGCTTAATTGAGGGGGGGGG+GGG | - | chr8.3:3070520-3070539 | None:intergenic | 60.0% | |
| CCAACAAGCGAGCTCATGCC+AGG | + | chr8.3:3069520-3069539 | MS.gene012389:CDS | 60.0% | |
| CCTGGCATGAGCTCGCTTGT+TGG | - | chr8.3:3069523-3069542 | None:intergenic | 60.0% | |
| GATCGGAGGATGAGAGGTGG+TGG | + | chr8.3:3071519-3071538 | MS.gene012389:intron | 60.0% | |
| TTGCAACCCACGGGCCAAGT+TGG | - | chr8.3:3068957-3068976 | None:intergenic | 60.0% | |
| ! | CCAAATGGTGGGACCCCTTC+CGG | + | chr8.3:3070120-3070139 | MS.gene012389:intron | 60.0% |
| ! | GCGGAAGCTTTAGTGCACCG+GGG | + | chr8.3:3070154-3070173 | MS.gene012389:intron | 60.0% |
| ! | TTGGTGGGTGAGGTCCTCCA+GGG | + | chr8.3:3071725-3071744 | MS.gene012389:intron | 60.0% |
| ! | TTTGGTGGGTGAGGTCCTCC+AGG | + | chr8.3:3071724-3071743 | MS.gene012389:intron | 60.0% |
| CCGGAAGGGGTCCCACCATT+TGG | - | chr8.3:3070123-3070142 | None:intergenic | 65.0% | |
| CCTTCCGGACCCTGCGTATG+CGG | + | chr8.3:3070135-3070154 | MS.gene012389:intron | 65.0% | |
| CGCATACGCAGGGTCCGGAA+GGG | - | chr8.3:3070137-3070156 | None:intergenic | 65.0% | |
| CTTAATTGAGGGGGGGGGGG+GGG | - | chr8.3:3070518-3070537 | None:intergenic | 65.0% | |
| GACACCGACGGAGGAGGGAT+TGG | - | chr8.3:3069126-3069145 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGAAG+GGG | - | chr8.3:3070136-3070155 | None:intergenic | 65.0% | |
| GCTTAATTGAGGGGGGGGGG+GGG | - | chr8.3:3070519-3070538 | None:intergenic | 65.0% | |
| GCTTCCGCATACGCAGGGTC+CGG | - | chr8.3:3070142-3070161 | None:intergenic | 65.0% | |
| TTAATTGAGGGGGGGGGGGG+GGG | - | chr8.3:3070517-3070536 | None:intergenic | 65.0% | |
| CCGCATACGCAGGGTCCGGA+AGG | - | chr8.3:3070138-3070157 | None:intergenic | 70.0% | |
| GGGGGGGGGGAATCAATGGC+TGG | - | chr8.3:3070485-3070504 | None:intergenic | 70.0% | |
| TAATTGAGGGGGGGGGGGGG+GGG | - | chr8.3:3070516-3070535 | None:intergenic | 70.0% | |
| AATTGAGGGGGGGGGGGGGG+GGG | - | chr8.3:3070515-3070534 | None:intergenic | 75.0% | |
| GGGGGGGGGGGGGGAATCAA+TGG | - | chr8.3:3070489-3070508 | None:intergenic | 75.0% | |
| ! | ATTGAGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070514-3070533 | None:intergenic | 80.0% |
| ! | TTGAGGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070513-3070532 | None:intergenic | 85.0% |
| ! | TGAGGGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070512-3070531 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070510-3070529 | None:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr8.3:3070511-3070530 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 3068924 | 3074252 | 3068924 | ID=MS.gene012389 |
| chr8.3 | mRNA | 3068924 | 3074252 | 3068924 | ID=MS.gene012389.t1;Parent=MS.gene012389 |
| chr8.3 | exon | 3068924 | 3069194 | 3068924 | ID=MS.gene012389.t1.exon1;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3068924 | 3069194 | 3068924 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| chr8.3 | exon | 3069317 | 3069541 | 3069317 | ID=MS.gene012389.t1.exon2;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3069317 | 3069541 | 3069317 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| chr8.3 | exon | 3071972 | 3072032 | 3071972 | ID=MS.gene012389.t1.exon3;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3071972 | 3072032 | 3071972 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| chr8.3 | exon | 3072167 | 3072314 | 3072167 | ID=MS.gene012389.t1.exon4;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3072167 | 3072314 | 3072167 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| chr8.3 | exon | 3072500 | 3072579 | 3072500 | ID=MS.gene012389.t1.exon5;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3072500 | 3072579 | 3072500 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| chr8.3 | exon | 3074120 | 3074252 | 3074120 | ID=MS.gene012389.t1.exon6;Parent=MS.gene012389.t1 |
| chr8.3 | CDS | 3074120 | 3074252 | 3074120 | ID=cds.MS.gene012389.t1;Parent=MS.gene012389.t1 |
| Gene Sequence |
| Protein sequence |
