Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012625.t1 | XP_024638310.1 | 94.5 | 1502 | 80 | 3 | 1 | 1499 | 1 | 1502 | 0.00E+00 | 2530.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012625.t1 | P62285 | 32.0 | 397 | 228 | 7 | 223 | 594 | 704 | 1083 | 5.1e-45 | 185.3 |
| MS.gene012625.t1 | P62285 | 24.6 | 285 | 201 | 7 | 1141 | 1419 | 2994 | 3270 | 1.8e-13 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012625.t1 | G7JI24 | 94.2 | 1501 | 81 | 3 | 1 | 1499 | 1 | 1497 | 0.0e+00 | 2519.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012625 | MS.gene074045 | PPI |
| MS.gene012625 | MS.gene47195 | PPI |
| MS.gene012625 | MS.gene55545 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012625.t1 | MTR_4g131940 | 96.469 | 1501 | 47 | 3 | 1 | 1499 | 1 | 1497 | 0.0 | 2975 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012625.t1 | AT4G21820 | 45.826 | 1126 | 515 | 23 | 6 | 1068 | 2 | 1095 | 0.0 | 905 |
| MS.gene012625.t1 | AT4G21820 | 41.030 | 563 | 270 | 11 | 947 | 1497 | 763 | 1275 | 2.58e-103 | 360 |
| MS.gene012625.t1 | AT4G21820 | 32.692 | 312 | 172 | 11 | 886 | 1193 | 791 | 1068 | 1.35e-31 | 135 |
| MS.gene012625.t1 | AT4G21820 | 44.030 | 1206 | 524 | 29 | 6 | 1193 | 2 | 1074 | 0.0 | 904 |
| MS.gene012625.t1 | AT4G21820 | 40.773 | 569 | 270 | 12 | 946 | 1497 | 763 | 1281 | 3.41e-102 | 357 |
| MS.gene012625.t1 | AT4G21820 | 41.769 | 1221 | 501 | 31 | 6 | 1193 | 2 | 1045 | 0.0 | 835 |
| MS.gene012625.t1 | AT4G21820 | 40.773 | 569 | 270 | 12 | 946 | 1497 | 734 | 1252 | 6.45e-103 | 358 |
Find 292 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTGGTTACTATGAAAATT+TGG | 0.113066 | 8.1:-2041103 | MS.gene012625:CDS |
| CTAGTAACGTGGTCAATTTC+TGG | 0.156011 | 8.1:+2038876 | None:intergenic |
| TGCCCGATAGTGACGGATTT+AGG | 0.178725 | 8.1:-2041348 | MS.gene012625:CDS |
| TAAAACTTGTTTCAGGAATA+AGG | 0.190295 | 8.1:-2031886 | MS.gene012625:intron |
| TTAACTCGAAATTTGATATT+AGG | 0.200670 | 8.1:-2033427 | MS.gene012625:intron |
| TGGAGCTCCAGCGCTATATT+AGG | 0.238865 | 8.1:-2033456 | MS.gene012625:CDS |
| GTAGCAGATGATATTGTTAA+TGG | 0.251954 | 8.1:-2040178 | MS.gene012625:CDS |
| ATAACCTAATAGCCGATTTC+GGG | 0.254036 | 8.1:+2034534 | None:intergenic |
| GGGAAACGTGATAATGTTTC+AGG | 0.256791 | 8.1:-2042033 | MS.gene012625:CDS |
| GAAGGAGGTTACTGAGATTC+TGG | 0.257988 | 8.1:-2031541 | MS.gene012625:CDS |
| AATAACCTAATAGCCGATTT+CGG | 0.265838 | 8.1:+2034533 | None:intergenic |
| TTAACCCGAAATCGGCTATT+AGG | 0.266984 | 8.1:-2034538 | MS.gene012625:intron |
| TCTGGTTACTATGAAAATTT+GGG | 0.279030 | 8.1:-2041102 | MS.gene012625:CDS |
| CAGAAATTGACCACGTTACT+AGG | 0.279579 | 8.1:-2038875 | MS.gene012625:CDS |
| TCTGACAATTGAGTGTCTTC+TGG | 0.282520 | 8.1:+2034602 | None:intergenic |
| GCCTAAATGCAGAAATGTTC+GGG | 0.285149 | 8.1:-2031613 | MS.gene012625:intron |
| GATTCTGCTTTGAATAATAA+AGG | 0.285817 | 8.1:+2040970 | None:intergenic |
| GAACATGTTCGTTCACTTGC+AGG | 0.293353 | 8.1:-2040125 | MS.gene012625:intron |
| GCAGTCAACAAAACAATTAA+TGG | 0.295526 | 8.1:-2032507 | MS.gene012625:CDS |
| GCCCGATAGTGACGGATTTA+GGG | 0.302514 | 8.1:-2041347 | MS.gene012625:CDS |
| AGTTCCTGCGATTTGTGTTT+TGG | 0.303824 | 8.1:+2037304 | None:intergenic |
| ACAACTTCTTCGTCGCGTTT+TGG | 0.307990 | 8.1:-2041949 | MS.gene012625:CDS |
| TGTGGTGGTGTGTTTGGATT+TGG | 0.325983 | 8.1:+2042308 | None:intergenic |
| TGGAGATCCAGCGCTTCATT+AGG | 0.336959 | 8.1:-2034567 | MS.gene012625:CDS |
| AAGATATGCTCAACTCAAAA+AGG | 0.339398 | 8.1:-2031828 | MS.gene012625:CDS |
| GGCGAAAGGCCGTTGTTTAT+AGG | 0.339844 | 8.1:-2033084 | MS.gene012625:CDS |
| TTGATAAAACAAGTTTAGTT+GGG | 0.344688 | 8.1:-2039923 | MS.gene012625:CDS |
| AAAGGCAGCCATTGGCATTC+AGG | 0.345521 | 8.1:-2035342 | MS.gene012625:CDS |
| TCTTTGAGCCTCGGCCTCCT+CGG | 0.350046 | 8.1:+2042282 | None:intergenic |
| CAGTGAGGAGTTGGTTCTAT+TGG | 0.350503 | 8.1:-2035544 | MS.gene012625:CDS |
| GGAGATCCAGCGCTTCATTA+GGG | 0.353363 | 8.1:-2034566 | MS.gene012625:CDS |
| CAGTTGGAGTTGATTCTACT+TGG | 0.354431 | 8.1:-2042005 | MS.gene012625:CDS |
| TGCTTTAGAACCTCTTGATC+AGG | 0.363295 | 8.1:+2032082 | None:intergenic |
| CGGTTCAAATTCTAGTTCTC+TGG | 0.363977 | 8.1:-2039740 | MS.gene012625:CDS |
| CGGGAGTGTGGTGGTGTGTT+TGG | 0.364331 | 8.1:+2042302 | None:intergenic |
| GGAGCTCCAGCGCTATATTA+GGG | 0.364674 | 8.1:-2033455 | MS.gene012625:CDS |
| GCTTAAATTAATGACTAAAT+CGG | 0.366500 | 8.1:-2034286 | MS.gene012625:CDS |
| ACCAACTCCTCACTGCTTGC+TGG | 0.366830 | 8.1:+2035552 | None:intergenic |
| GTTGATAAAACAAGTTTAGT+TGG | 0.369360 | 8.1:-2039924 | MS.gene012625:CDS |
| AATATTCTGTGTCTCAACTA+TGG | 0.369377 | 8.1:+2034215 | None:intergenic |
| TGTGAAGAACTTGTGGCTGC+TGG | 0.373125 | 8.1:-2032154 | MS.gene012625:CDS |
| TGCCTAAATGCAGAAATGTT+CGG | 0.373194 | 8.1:-2031614 | MS.gene012625:intron |
| TGTCAACTGGGCAGTTATAA+TGG | 0.374839 | 8.1:+2039148 | None:intergenic |
| TAGCCAAATCGCTCACTGTT+TGG | 0.377033 | 8.1:-2042152 | MS.gene012625:CDS |
| GTGGTATAGGTAGTGCTTCC+AGG | 0.379353 | 8.1:-2034428 | MS.gene012625:intron |
| AGAAGAAGAAGAAGCGCGTT+TGG | 0.380176 | 8.1:+2042377 | None:intergenic |
| ATTCTGCTTTGAATAATAAA+GGG | 0.381890 | 8.1:+2040971 | None:intergenic |
| CGGCTAGTCTAAGATATTGT+AGG | 0.384478 | 8.1:+2040236 | None:intergenic |
| CTTCATACTTGTTCAACATT+GGG | 0.385260 | 8.1:-2032368 | MS.gene012625:intron |
| GGAATCGCAGCTACCTTTGT+TGG | 0.390783 | 8.1:-2039946 | MS.gene012625:intron |
| AGTGAGCTACTTCAATATAA+TGG | 0.392278 | 8.1:-2037516 | MS.gene012625:CDS |
| TCAGACTTGGTGGCAAGATA+TGG | 0.394021 | 8.1:-2036584 | MS.gene012625:CDS |
| AGATGGTTGAAGGAGTTTAT+AGG | 0.394327 | 8.1:-2041125 | MS.gene012625:CDS |
| GAGGATAGCGAGCAAGATTT+CGG | 0.396754 | 8.1:+2032044 | None:intergenic |
| GAACTTCAAAACCATGTTCA+AGG | 0.397197 | 8.1:-2035144 | MS.gene012625:CDS |
| AGGGAGTGAAAATTGTCAAC+TGG | 0.397970 | 8.1:+2039135 | None:intergenic |
| AGTTGCCTCCCGATTGAGTA+TGG | 0.398412 | 8.1:-2041018 | MS.gene012625:CDS |
| AACTCACAATTTCTTTACTC+TGG | 0.399198 | 8.1:-2040147 | MS.gene012625:CDS |
| CTTTGAGCCTCGGCCTCCTC+GGG | 0.400083 | 8.1:+2042283 | None:intergenic |
| CGATCGAAGTGTGGTGATAT+TGG | 0.404080 | 8.1:-2037484 | MS.gene012625:CDS |
| CTCTGAAAACGGTCTGCAAA+AGG | 0.406218 | 8.1:+2035820 | None:intergenic |
| GTTGAAGGAGTTTATAGGTC+TGG | 0.407513 | 8.1:-2041120 | MS.gene012625:CDS |
| AAGCCAAACAGTGAGCGATT+TGG | 0.408542 | 8.1:+2042149 | None:intergenic |
| AGCAAGCAGTCAAGTGATCC+AGG | 0.409945 | 8.1:-2040938 | MS.gene012625:CDS |
| GAAGAAGAAGAAGCGCGTTT+GGG | 0.412311 | 8.1:+2042378 | None:intergenic |
| CCATTGGCATTCAGGTTGCT+TGG | 0.414720 | 8.1:-2035334 | MS.gene012625:CDS |
| AGACATTGTGAAGTTCCTTC+TGG | 0.416166 | 8.1:+2039070 | None:intergenic |
| GTCTTGTTGAGGAGCTTACT+AGG | 0.418701 | 8.1:-2031758 | MS.gene012625:CDS |
| TCACAATGTCTGTTCGTTGA+AGG | 0.418778 | 8.1:-2039058 | MS.gene012625:intron |
| TATTATTCAAAGCAGAATCC+TGG | 0.420188 | 8.1:-2040966 | MS.gene012625:CDS |
| GTGAAGAACTTGTGGCTGCT+GGG | 0.424815 | 8.1:-2032153 | MS.gene012625:CDS |
| TGACAAATAACTGGCTTGCC+AGG | 0.428054 | 8.1:+2037454 | None:intergenic |
| GGATTTAGGGTTGAAGGATA+AGG | 0.432936 | 8.1:-2041334 | MS.gene012625:CDS |
| GCATCATATCGTTGTCATAC+AGG | 0.433311 | 8.1:-2033062 | MS.gene012625:intron |
| AGGTTGCGTTCAGCTGATAC+TGG | 0.433477 | 8.1:-2034408 | MS.gene012625:CDS |
| TCTTCATACTTGTTCAACAT+TGG | 0.437444 | 8.1:-2032369 | MS.gene012625:CDS |
| TCAAACTTCGACTGACGCTC+TGG | 0.438633 | 8.1:+2034629 | None:intergenic |
| AAGCTACGTGCAGTTGCTGC+TGG | 0.439369 | 8.1:-2033265 | MS.gene012625:CDS |
| GGGGACATTTAACCCGAAAT+CGG | 0.440031 | 8.1:-2034546 | MS.gene012625:CDS |
| TGAGGAGTTGGTTCTATTGG+AGG | 0.440506 | 8.1:-2035541 | MS.gene012625:CDS |
| CTCAACTATGGCCTTCCGTC+TGG | 0.446312 | 8.1:+2034227 | None:intergenic |
| ATCAAAGATAAGTTTCTGTT+CGG | 0.446584 | 8.1:+2035373 | None:intergenic |
| ACATATGCTGCAAGTCTACT+AGG | 0.452054 | 8.1:-2035304 | MS.gene012625:CDS |
| TCAGATCGCCGATGCTTCTC+CGG | 0.453169 | 8.1:-2042067 | MS.gene012625:CDS |
| TGCTTCTCCGGTGATGAGTA+AGG | 0.454741 | 8.1:-2042055 | MS.gene012625:CDS |
| TAGTAACGTGGTCAATTTCT+GGG | 0.456686 | 8.1:+2038877 | None:intergenic |
| GGATGCATTTCAAAACCAAC+TGG | 0.457818 | 8.1:-2033244 | MS.gene012625:CDS |
| CCGTCAATACCATACTCAAT+CGG | 0.458370 | 8.1:+2041009 | None:intergenic |
| GTTGTCTTCCTCTGTCGTTT+CGG | 0.459220 | 8.1:+2041976 | None:intergenic |
| GGGGACTCTTTAGTGTCAAA+TGG | 0.459735 | 8.1:-2041246 | MS.gene012625:CDS |
| TTGACTGCTTGCTTTAACCC+AGG | 0.459965 | 8.1:+2040948 | None:intergenic |
| ACATTCGTGGGTGGGTAACT+AGG | 0.468279 | 8.1:-2033105 | MS.gene012625:CDS |
| ACCCTAAATCCGTCACTATC+GGG | 0.468412 | 8.1:+2041346 | None:intergenic |
| TGCAGTCTCTTTAGAAAGGC+AGG | 0.468482 | 8.1:+2031783 | None:intergenic |
| TACAATATCTTAGACTAGCC+GGG | 0.469575 | 8.1:-2040234 | MS.gene012625:CDS |
| CTCGAATCACCTGCTTCTTG+CGG | 0.471090 | 8.1:-2042117 | MS.gene012625:CDS |
| AACCCTAAATCCGTCACTAT+CGG | 0.471671 | 8.1:+2041345 | None:intergenic |
| TCCAGAGGCATTGCCGTGGT+TGG | 0.473074 | 8.1:-2034699 | MS.gene012625:intron |
| TCACCCACATCTGAATCATA+AGG | 0.473997 | 8.1:+2037237 | None:intergenic |
| TTACAAACTATCTCACCAAC+AGG | 0.476368 | 8.1:-2040753 | MS.gene012625:intron |
| GCTCCAATGCGGCATACTCC+TGG | 0.477976 | 8.1:+2033473 | None:intergenic |
| GGCTTATTCGATTAATCAGC+AGG | 0.479285 | 8.1:-2032111 | MS.gene012625:CDS |
| AGGCAATCTTCTAACACATC+TGG | 0.479527 | 8.1:-2040786 | MS.gene012625:CDS |
| GGGACTCTTTAGTGTCAAAT+GGG | 0.484175 | 8.1:-2041245 | MS.gene012625:CDS |
| TCTCTAACAATAACTGAACT+AGG | 0.486724 | 8.1:+2031582 | None:intergenic |
| ATGAGTGTTTATTTGAGTCT+CGG | 0.487050 | 8.1:-2041826 | MS.gene012625:CDS |
| GGAAGGCCACTTACCAGAAA+AGG | 0.487331 | 8.1:-2031737 | MS.gene012625:intron |
| CCACACTCCCGAGGAGGCCG+AGG | 0.488006 | 8.1:-2042290 | MS.gene012625:CDS |
| ACGCTTGAAGGATTCGTTGA+AGG | 0.488604 | 8.1:-2041881 | MS.gene012625:CDS |
| TTCAGAAATTCCTTCGTGGT+TGG | 0.489245 | 8.1:-2035454 | MS.gene012625:CDS |
| CCGATTGAGTATGGTATTGA+CGG | 0.490560 | 8.1:-2041009 | MS.gene012625:CDS |
| AGATGCCGCAAGAAAATTCA+AGG | 0.490595 | 8.1:-2036611 | MS.gene012625:CDS |
| AAACACAGATAGAAGATTGA+AGG | 0.492491 | 8.1:-2031559 | MS.gene012625:CDS |
| CTACAATATCTTAGACTAGC+CGG | 0.492731 | 8.1:-2040235 | MS.gene012625:CDS |
| TTCAGTGTAATTTCCGTAGG+TGG | 0.493257 | 8.1:-2035256 | MS.gene012625:CDS |
| AATGTTTCAGGAAATTCAGT+TGG | 0.495697 | 8.1:-2042021 | MS.gene012625:CDS |
| AGCTTGGCTGAAAGTGAGGC+AGG | 0.496626 | 8.1:-2035799 | MS.gene012625:CDS |
| AATCCAAGTTGGCTGCGAAT+CGG | 0.498222 | 8.1:-2041288 | MS.gene012625:CDS |
| GTGCTGATTCAGAACGGGAA+TGG | 0.499220 | 8.1:+2037265 | None:intergenic |
| AGCTTTGAGTTTCTTTGAAG+CGG | 0.501431 | 8.1:+2042242 | None:intergenic |
| AAACCGATTCGCAGCCAACT+TGG | 0.501691 | 8.1:+2041285 | None:intergenic |
| ATCTTGCCACCAAGTCTGAA+TGG | 0.503046 | 8.1:+2036588 | None:intergenic |
| TCCAGCAAGCAGTGAGGAGT+TGG | 0.504754 | 8.1:-2035553 | MS.gene012625:CDS |
| AAAGGCAGGAGATTTGAGTA+TGG | 0.505255 | 8.1:+2031797 | None:intergenic |
| ACATCGCAACCGCAAGAAGC+AGG | 0.506137 | 8.1:+2042108 | None:intergenic |
| CCACATGAGAAATCATAGAT+TGG | 0.507475 | 8.1:+2035747 | None:intergenic |
| TTGTTGATGGCAAAGCAATC+TGG | 0.507844 | 8.1:-2039113 | MS.gene012625:CDS |
| AGTGACGGATTTAGGGTTGA+AGG | 0.509037 | 8.1:-2041340 | MS.gene012625:CDS |
| GTGTCTGCAGTCAAGAGGTC+AGG | 0.510234 | 8.1:+2035497 | None:intergenic |
| AAGCCGCAGCAAGGTGTCAA+TGG | 0.511022 | 8.1:+2032129 | None:intergenic |
| AACTTGGATTATAACACATA+AGG | 0.511099 | 8.1:+2041301 | None:intergenic |
| AGAAGTGCTGATACAAAGAC+AGG | 0.511621 | 8.1:-2032014 | MS.gene012625:CDS |
| ACTATTCAGAAATTCCTTCG+TGG | 0.512673 | 8.1:-2035458 | MS.gene012625:CDS |
| CAGAGAACTAGAATTTGAAC+CGG | 0.513856 | 8.1:+2039741 | None:intergenic |
| CTGCCAGGAGTATGCCGCAT+TGG | 0.514483 | 8.1:-2033476 | MS.gene012625:CDS |
| GCCGTGGTTGGCTTGTGAAA+CGG | 0.515885 | 8.1:-2034687 | MS.gene012625:CDS |
| CGTCAATACCATACTCAATC+GGG | 0.516159 | 8.1:+2041010 | None:intergenic |
| AGTATCAGCTGAACGCAACC+TGG | 0.517224 | 8.1:+2034410 | None:intergenic |
| GAAATTCCTTCGTGGTTGGA+TGG | 0.517566 | 8.1:-2035450 | MS.gene012625:CDS |
| GTCTGCATGATATTCACTAC+TGG | 0.517737 | 8.1:-2035771 | MS.gene012625:CDS |
| TTCTATACAGACAATCGTCT+TGG | 0.519044 | 8.1:-2031990 | MS.gene012625:CDS |
| GCATATAACAAGATGGTTGA+AGG | 0.520781 | 8.1:-2041135 | MS.gene012625:CDS |
| TTATTTATAGATCTCCAAGA+TGG | 0.520938 | 8.1:-2040454 | MS.gene012625:CDS |
| ACGCCGCAAGTTTCTCAAGA+TGG | 0.521487 | 8.1:-2035856 | MS.gene012625:CDS |
| GTAGCTCTGAAAGCGCTGCC+AGG | 0.522033 | 8.1:+2032417 | None:intergenic |
| ATTATTCAAAGCAGAATCCT+GGG | 0.522532 | 8.1:-2040965 | MS.gene012625:CDS |
| TGAAGAACTTGTGGCTGCTG+GGG | 0.523123 | 8.1:-2032152 | MS.gene012625:CDS |
| TTGTCAGAAAGATGCTGCAC+TGG | 0.524588 | 8.1:-2034587 | MS.gene012625:CDS |
| AGTACAAGATTGAATTATGA+TGG | 0.527847 | 8.1:+2034263 | None:intergenic |
| TAGTGAAATTGCAACGGTGG+TGG | 0.527872 | 8.1:-2034323 | MS.gene012625:CDS |
| CCTCGGCCTCCTCGGGAGTG+TGG | 0.531389 | 8.1:+2042290 | None:intergenic |
| GAAATTGCAACGGTGGTGGA+AGG | 0.531756 | 8.1:-2034319 | MS.gene012625:CDS |
| GGTTGCGATGTTTCAATCGC+CGG | 0.533784 | 8.1:-2042096 | MS.gene012625:CDS |
| CTTAAAACAAAGGCAGCCAT+TGG | 0.534293 | 8.1:-2035350 | MS.gene012625:CDS |
| AATTCAAGGCCATTCAGACT+TGG | 0.534457 | 8.1:-2036597 | MS.gene012625:CDS |
| TCAAGGCCATTCAGACTTGG+TGG | 0.534709 | 8.1:-2036594 | MS.gene012625:CDS |
| GGTGTGTTTGGATTTGGAAG+CGG | 0.536855 | 8.1:+2042314 | None:intergenic |
| TTTCAGCCAAGCTCTGAAAA+CGG | 0.539449 | 8.1:+2035809 | None:intergenic |
| GAAGAAGAGCGAAAAGGTGA+AGG | 0.540916 | 8.1:+2042432 | None:intergenic |
| AAATAATTCTTCTATACTCA+AGG | 0.541196 | 8.1:-2040398 | MS.gene012625:intron |
| TTCAGTCCCACATTCGTGGG+TGG | 0.541456 | 8.1:-2033114 | MS.gene012625:CDS |
| TCTGAAAACGGTCTGCAAAA+GGG | 0.541618 | 8.1:+2035821 | None:intergenic |
| TTGTTTCAGGAATAAGGAGG+AGG | 0.541669 | 8.1:-2031880 | MS.gene012625:intron |
| AGAAGTGAAGAAGAGCGAAA+AGG | 0.542296 | 8.1:+2042426 | None:intergenic |
| GTTTATCAGACGATTGATGA+AGG | 0.542922 | 8.1:-2041393 | MS.gene012625:intron |
| TGATAAAACAAGTTTAGTTG+GGG | 0.544125 | 8.1:-2039922 | MS.gene012625:CDS |
| TCTGATGTAATGCGCGGAGA+AGG | 0.545875 | 8.1:-2040806 | MS.gene012625:CDS |
| TGAAGGAAGGCTAAATATGA+AGG | 0.545965 | 8.1:-2041376 | MS.gene012625:CDS |
| GGCAAGCCAGTTATTTGTCA+AGG | 0.546171 | 8.1:-2037451 | MS.gene012625:CDS |
| TTCGAACAATCAATGGAAGA+AGG | 0.547742 | 8.1:-2042486 | None:intergenic |
| TAGTTACCCACCCACGAATG+TGG | 0.548697 | 8.1:+2033107 | None:intergenic |
| GCGGTGAAGAATTGAGTTTG+AGG | 0.550293 | 8.1:+2042333 | None:intergenic |
| TATTTATAGATCTCCAAGAT+GGG | 0.550654 | 8.1:-2040453 | MS.gene012625:CDS |
| GCGTCTCATTAACAGACTCC+TGG | 0.552016 | 8.1:-2032435 | MS.gene012625:CDS |
| CCAATCTATGATTTCTCATG+TGG | 0.552337 | 8.1:-2035747 | MS.gene012625:intron |
| ATCAGACGATTGATGAAGGA+AGG | 0.552902 | 8.1:-2041389 | MS.gene012625:intron |
| CTATAAATAAATCTCTGACT+CGG | 0.553159 | 8.1:+2040467 | None:intergenic |
| ACACAAATCGCAGGAACTTG+AGG | 0.553344 | 8.1:-2037299 | MS.gene012625:CDS |
| GGCTAGTCTAAGATATTGTA+GGG | 0.553920 | 8.1:+2040237 | None:intergenic |
| ATAATTCAATCTTGTACTCG+TGG | 0.555248 | 8.1:-2034258 | MS.gene012625:CDS |
| ATCATATGCATATAACAAGA+TGG | 0.556130 | 8.1:-2041142 | MS.gene012625:CDS |
| CCAAGCAACCTGAATGCCAA+TGG | 0.559887 | 8.1:+2035334 | None:intergenic |
| CGTTTCCCCTTACTCATCAC+CGG | 0.561763 | 8.1:+2042048 | None:intergenic |
| TCAGTCCCACATTCGTGGGT+GGG | 0.562254 | 8.1:-2033113 | MS.gene012625:CDS |
| GCTTCTCCGGTGATGAGTAA+GGG | 0.562485 | 8.1:-2042054 | MS.gene012625:CDS |
| AATGTCCCCTAATGAAGCGC+TGG | 0.562533 | 8.1:+2034560 | None:intergenic |
| ATCGGCGATCTGACTTCCAC+CGG | 0.563010 | 8.1:+2042077 | None:intergenic |
| TTACCATCTTGAGAAACTTG+CGG | 0.563430 | 8.1:+2035853 | None:intergenic |
| TTTGATTTGTTCGATTCTGG+AGG | 0.564054 | 8.1:+2042197 | None:intergenic |
| TGTCATGAATCAAGTCACTA+AGG | 0.566715 | 8.1:-2041782 | MS.gene012625:intron |
| ACTGAAGGTTCGTAACTGCC+AGG | 0.566812 | 8.1:-2033491 | MS.gene012625:intron |
| ATTATTCAGTCCCACATTCG+TGG | 0.567609 | 8.1:-2033118 | MS.gene012625:CDS |
| TATCTTTGATCTTAAAACAA+AGG | 0.568673 | 8.1:-2035360 | MS.gene012625:CDS |
| AAAACCTTATGATTCAGATG+TGG | 0.568833 | 8.1:-2037241 | MS.gene012625:CDS |
| CGGCCTCCTCGGGAGTGTGG+TGG | 0.570190 | 8.1:+2042293 | None:intergenic |
| TGTTGAGGAGCTTACTAGGA+AGG | 0.570411 | 8.1:-2031754 | MS.gene012625:CDS |
| GCTTTAGAACCTCTTGATCA+GGG | 0.571589 | 8.1:+2032083 | None:intergenic |
| TGCGATGTTTCAATCGCCGG+TGG | 0.572081 | 8.1:-2042093 | MS.gene012625:CDS |
| TCAGATGTGGGTGACAATGA+AGG | 0.572246 | 8.1:-2037228 | MS.gene012625:intron |
| AAACCTTATGATTCAGATGT+GGG | 0.572621 | 8.1:-2037240 | MS.gene012625:CDS |
| GAGCGAAAAGGTGAAGGTGA+TGG | 0.572646 | 8.1:+2042438 | None:intergenic |
| ACTCATCACCGGAGAAGCAT+CGG | 0.573168 | 8.1:+2042059 | None:intergenic |
| TGAGTATGGTATTGACGGAC+TGG | 0.575449 | 8.1:-2041004 | MS.gene012625:CDS |
| TTCATCAAGTAGCGAGACCC+CGG | 0.576559 | 8.1:+2040216 | None:intergenic |
| GGGAGTGAAAATTGTCAACT+GGG | 0.578385 | 8.1:+2039136 | None:intergenic |
| AGAAATTGACCACGTTACTA+GGG | 0.578886 | 8.1:-2038874 | MS.gene012625:CDS |
| GTTTGCAAAATAGAGATCGT+TGG | 0.579287 | 8.1:+2036538 | None:intergenic |
| ACTGTGCAGTCTCTTTAGAA+AGG | 0.580430 | 8.1:+2031779 | None:intergenic |
| TTCAATCTTGTACTCGTGGG+TGG | 0.582802 | 8.1:-2034254 | MS.gene012625:CDS |
| TAGTGACTTGATTCATGACA+TGG | 0.583374 | 8.1:+2041785 | None:intergenic |
| TTATGTGTTATAATCCAAGT+TGG | 0.585741 | 8.1:-2041299 | MS.gene012625:CDS |
| TGCAACACTTCCGTTAGAAG+AGG | 0.585745 | 8.1:-2036499 | MS.gene012625:intron |
| GACACAGAATATTAATGTCA+TGG | 0.586727 | 8.1:-2034205 | MS.gene012625:intron |
| CAGGAGTATCCCTGATCAAG+AGG | 0.587294 | 8.1:-2032092 | MS.gene012625:CDS |
| GACGTACTTCTCGTATACTT+CGG | 0.589060 | 8.1:+2035631 | None:intergenic |
| TAATTCAATCTTGTACTCGT+GGG | 0.589511 | 8.1:-2034257 | MS.gene012625:CDS |
| GCTGAAAGTGAGGCAGGAGT+CGG | 0.589728 | 8.1:-2035793 | MS.gene012625:CDS |
| AAATTGCAACGGTGGTGGAA+GGG | 0.591666 | 8.1:-2034318 | MS.gene012625:CDS |
| ATCAGCACTTCTAGCAGATG+AGG | 0.592669 | 8.1:+2032025 | None:intergenic |
| ACTTGATTATTACTTCCAGA+AGG | 0.592884 | 8.1:-2039085 | MS.gene012625:CDS |
| TTATTCAGTCCCACATTCGT+GGG | 0.593895 | 8.1:-2033117 | MS.gene012625:CDS |
| TCAGAGCTTGGCTGAAAGTG+AGG | 0.593975 | 8.1:-2035803 | MS.gene012625:CDS |
| GGGCCATTGACACCTTGCTG+CGG | 0.596327 | 8.1:-2032132 | MS.gene012625:CDS |
| GACAATAGCAGCCTTGAACA+TGG | 0.596492 | 8.1:+2035133 | None:intergenic |
| AGATTGCTTTGCCATCAACA+AGG | 0.597190 | 8.1:+2039115 | None:intergenic |
| TTCTGCTTTGAATAATAAAG+GGG | 0.597872 | 8.1:+2040972 | None:intergenic |
| ACAATCACATATCCGAGGAC+TGG | 0.601468 | 8.1:-2035883 | MS.gene012625:CDS |
| AAATTCAGTGTAATTTCCGT+AGG | 0.602662 | 8.1:-2035259 | MS.gene012625:CDS |
| AATAGGTTTACCTCTTCTAA+CGG | 0.603551 | 8.1:+2036489 | None:intergenic |
| TGAAAACTACATAAGCCAGC+TGG | 0.603663 | 8.1:+2034369 | None:intergenic |
| TGTTTCAGGAATAAGGAGGA+GGG | 0.603893 | 8.1:-2031879 | MS.gene012625:intron |
| TAGTGAAATTGCAACGATGG+TGG | 0.603926 | 8.1:-2033183 | MS.gene012625:CDS |
| AAGGAATTTCTGAATAGTAG+TGG | 0.604504 | 8.1:+2035463 | None:intergenic |
| AGTTACCCACCCACGAATGT+GGG | 0.605730 | 8.1:+2033108 | None:intergenic |
| CTTCTCCGGTGATGAGTAAG+GGG | 0.607653 | 8.1:-2042053 | MS.gene012625:CDS |
| TCACAGTGTCTGCAGTCAAG+AGG | 0.609022 | 8.1:+2035492 | None:intergenic |
| CAATCGTCTTGGAGTTACTG+AGG | 0.611458 | 8.1:-2031979 | MS.gene012625:intron |
| TGCGGCGTACAACCAGTCCT+CGG | 0.612962 | 8.1:+2035871 | None:intergenic |
| AAAGGTGAAGGTGATGGACA+TGG | 0.613849 | 8.1:+2042444 | None:intergenic |
| ACCTTACAGGAACTCATGAC+CGG | 0.614271 | 8.1:-2039760 | MS.gene012625:intron |
| ACAATAACTGAACTAGGAGT+AGG | 0.615426 | 8.1:+2031588 | None:intergenic |
| GAGATCCAGCGCTTCATTAG+GGG | 0.616535 | 8.1:-2034565 | MS.gene012625:CDS |
| AAGAAGCAGGTGATTCGAGA+AGG | 0.616547 | 8.1:+2042121 | None:intergenic |
| GAGATGTTGTGAAGAACTTG+TGG | 0.617817 | 8.1:-2032161 | MS.gene012625:CDS |
| TGAAAACTACAAAAGCCAGT+TGG | 0.619815 | 8.1:+2033229 | None:intergenic |
| GATTGCTTTGCCATCAACAA+GGG | 0.619914 | 8.1:+2039116 | None:intergenic |
| TCTTTAGTGTCAAATGGGGA+TGG | 0.619988 | 8.1:-2041240 | MS.gene012625:CDS |
| ATGCTGCAAGTCTACTAGGA+AGG | 0.620388 | 8.1:-2035300 | MS.gene012625:CDS |
| AAGTAGTGAAATTGCAACGA+TGG | 0.621398 | 8.1:-2033186 | MS.gene012625:CDS |
| CGGAAATCATACTCAACAAG+AGG | 0.621998 | 8.1:+2040487 | None:intergenic |
| AAGAAGAAGAAGCGCGTTTG+GGG | 0.622540 | 8.1:+2042379 | None:intergenic |
| GAGACTGCACAGTCTTGTTG+AGG | 0.623493 | 8.1:-2031769 | MS.gene012625:CDS |
| TCCGTTTCACAAGCCAACCA+CGG | 0.624767 | 8.1:+2034686 | None:intergenic |
| TTCTATTGGAGGTCTCGACA+AGG | 0.626721 | 8.1:-2035530 | MS.gene012625:CDS |
| GGCACATTGCCCGATAGTGA+CGG | 0.626777 | 8.1:-2041355 | MS.gene012625:CDS |
| TGGGTGGATAGCCAGACGGA+AGG | 0.626954 | 8.1:-2034238 | MS.gene012625:CDS |
| TGGGTGGGTAACTAGGCGAA+AGG | 0.634042 | 8.1:-2033098 | MS.gene012625:CDS |
| TCTTCCGAGCAATCCATCCA+CGG | 0.636248 | 8.1:+2035096 | None:intergenic |
| ACTGCCAAAACACAAATCGC+AGG | 0.637903 | 8.1:-2037308 | MS.gene012625:CDS |
| ACACCACCACACTCCCGAGG+AGG | 0.638844 | 8.1:-2042296 | MS.gene012625:CDS |
| GGTATTGACGGACTGGACGG+TGG | 0.646602 | 8.1:-2040997 | MS.gene012625:CDS |
| CAGTAGTGAAATTGCAACGG+TGG | 0.646813 | 8.1:-2034326 | MS.gene012625:CDS |
| CACAGATAGAAGATTGAAGG+AGG | 0.650048 | 8.1:-2031556 | MS.gene012625:CDS |
| GCAAGCAGTCAAGTGATCCA+GGG | 0.650752 | 8.1:-2040937 | MS.gene012625:intron |
| TAATCGAATAAGCCGCAGCA+AGG | 0.653025 | 8.1:+2032120 | None:intergenic |
| GGAGAACTCCGAAACGACAG+AGG | 0.654798 | 8.1:-2041984 | MS.gene012625:CDS |
| CTCGTGGGTGGATAGCCAGA+CGG | 0.656170 | 8.1:-2034242 | MS.gene012625:CDS |
| CTGTCATCTGATGTAATGCG+CGG | 0.661792 | 8.1:-2040812 | MS.gene012625:CDS |
| CTGGTTACTATGAAAATTTG+GGG | 0.664315 | 8.1:-2041101 | MS.gene012625:CDS |
| GTGCAACGTAACCTTTCCAG+TGG | 0.664767 | 8.1:+2032534 | None:intergenic |
| GAGCTCCAGCGCTATATTAG+GGG | 0.666944 | 8.1:-2033454 | MS.gene012625:CDS |
| CAATACCATACTCAATCGGG+AGG | 0.668182 | 8.1:+2041013 | None:intergenic |
| TGCTTGCAGCGATCGAAGTG+TGG | 0.669603 | 8.1:-2037493 | MS.gene012625:CDS |
| ACAATATCTTAGACTAGCCG+GGG | 0.669852 | 8.1:-2040233 | MS.gene012625:CDS |
| AACTTGTTTCAGGAATAAGG+AGG | 0.671501 | 8.1:-2031883 | MS.gene012625:intron |
| TATGGTATTGACGGACTGGA+CGG | 0.677743 | 8.1:-2041000 | MS.gene012625:CDS |
| TCGCAGTAGTGAAATTGCAA+CGG | 0.679721 | 8.1:-2034329 | MS.gene012625:CDS |
| AGAAGAAGAAGCGCGTTTGG+GGG | 0.680940 | 8.1:+2042380 | None:intergenic |
| AACACACCACCACACTCCCG+AGG | 0.681227 | 8.1:-2042299 | MS.gene012625:CDS |
| GATATGATGCCTATAAACAA+CGG | 0.683106 | 8.1:+2033075 | None:intergenic |
| TGCAACGTAACCTTTCCAGT+GGG | 0.688643 | 8.1:+2032535 | None:intergenic |
| CCTAAATGCAGAAATGTTCG+GGG | 0.690471 | 8.1:-2031612 | MS.gene012625:intron |
| ACAATACAATCACATATCCG+AGG | 0.690631 | 8.1:-2035888 | MS.gene012625:CDS |
| AGCTCCAGCGCTATATTAGG+GGG | 0.692058 | 8.1:-2033453 | MS.gene012625:CDS |
| TGATTCCAGAGGCATTGCCG+TGG | 0.692767 | 8.1:-2034703 | MS.gene012625:intron |
| AGGAAAATTCCCTAGTAACG+TGG | 0.692864 | 8.1:+2038865 | None:intergenic |
| AAATCGCAGGAACTTGAGGA+CGG | 0.697618 | 8.1:-2037295 | MS.gene012625:CDS |
| GGACTCTTTAGTGTCAAATG+GGG | 0.704295 | 8.1:-2041244 | MS.gene012625:CDS |
| AGCTTATCCAGCAAGCAGTG+AGG | 0.709006 | 8.1:-2035559 | MS.gene012625:CDS |
| ATCGTGCCATCCAACCACGA+AGG | 0.721793 | 8.1:+2035444 | None:intergenic |
| GAAGTGCTGATACAAAGACA+GGG | 0.754042 | 8.1:-2032013 | MS.gene012625:CDS |
| ATAGCGCTGGAGCTCCAATG+CGG | 0.758157 | 8.1:+2033462 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 2031521 | 2042496 | 2031521 | ID=MS.gene012625 |
| chr8.1 | mRNA | 2031521 | 2042496 | 2031521 | ID=MS.gene012625.t1;Parent=MS.gene012625 |
| chr8.1 | exon | 2041783 | 2042496 | 2041783 | ID=MS.gene012625.t1.exon1;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2041783 | 2042496 | 2041783 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2040938 | 2041406 | 2040938 | ID=MS.gene012625.t1.exon2;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2040938 | 2041406 | 2040938 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2040754 | 2040839 | 2040754 | ID=MS.gene012625.t1.exon3;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2040754 | 2040839 | 2040754 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2040399 | 2040512 | 2040399 | ID=MS.gene012625.t1.exon4;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2040399 | 2040512 | 2040399 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2040126 | 2040314 | 2040126 | ID=MS.gene012625.t1.exon5;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2040126 | 2040314 | 2040126 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2039893 | 2039958 | 2039893 | ID=MS.gene012625.t1.exon6;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2039893 | 2039958 | 2039893 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2039717 | 2039773 | 2039717 | ID=MS.gene012625.t1.exon7;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2039717 | 2039773 | 2039717 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2039059 | 2039181 | 2039059 | ID=MS.gene012625.t1.exon8;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2039059 | 2039181 | 2039059 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2038862 | 2038978 | 2038862 | ID=MS.gene012625.t1.exon9;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2038862 | 2038978 | 2038862 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2037443 | 2037550 | 2037443 | ID=MS.gene012625.t1.exon10;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2037443 | 2037550 | 2037443 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2037229 | 2037364 | 2037229 | ID=MS.gene012625.t1.exon11;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2037229 | 2037364 | 2037229 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2036500 | 2036631 | 2036500 | ID=MS.gene012625.t1.exon12;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2036500 | 2036631 | 2036500 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2035748 | 2035924 | 2035748 | ID=MS.gene012625.t1.exon13;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2035748 | 2035924 | 2035748 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2035058 | 2035668 | 2035058 | ID=MS.gene012625.t1.exon14;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2035058 | 2035668 | 2035058 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2034539 | 2034716 | 2034539 | ID=MS.gene012625.t1.exon15;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2034539 | 2034716 | 2034539 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2034206 | 2034441 | 2034206 | ID=MS.gene012625.t1.exon16;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2034206 | 2034441 | 2034206 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2033428 | 2033506 | 2033428 | ID=MS.gene012625.t1.exon17;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2033428 | 2033506 | 2033428 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2033063 | 2033298 | 2033063 | ID=MS.gene012625.t1.exon18;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2033063 | 2033298 | 2033063 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2032369 | 2032558 | 2032369 | ID=MS.gene012625.t1.exon19;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2032369 | 2032558 | 2032369 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2031980 | 2032205 | 2031980 | ID=MS.gene012625.t1.exon20;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2031980 | 2032205 | 2031980 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2031738 | 2031893 | 2031738 | ID=MS.gene012625.t1.exon21;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2031738 | 2031893 | 2031738 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| chr8.1 | exon | 2031521 | 2031623 | 2031521 | ID=MS.gene012625.t1.exon22;Parent=MS.gene012625.t1 |
| chr8.1 | CDS | 2031521 | 2031623 | 2031521 | ID=cds.MS.gene012625.t1;Parent=MS.gene012625.t1 |
| Gene Sequence |
| Protein sequence |
