AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074045


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074045.t1 MTR_6g025320 100.000 149 0 0 1 149 1 149 2.20e-106 300
MS.gene074045.t1 MTR_5g088320 99.329 149 1 0 1 149 1 149 8.38e-106 298
MS.gene074045.t1 MTR_7g087610 98.658 149 2 0 1 149 1 149 2.26e-104 295
MS.gene074045.t1 MTR_1g041285 78.378 148 32 0 1 148 1 148 3.37e-83 241
MS.gene074045.t1 MTR_1g041285 47.692 65 34 0 85 149 12 76 5.28e-12 60.1
MS.gene074045.t1 MTR_1g076650 77.703 148 33 0 1 148 1 148 5.58e-83 241
MS.gene074045.t1 MTR_1g076650 45.070 71 36 1 82 149 6 76 2.84e-11 58.2
MS.gene074045.t1 MTR_0168s0120 100.000 113 0 0 37 149 1 113 1.13e-78 228
MS.gene074045.t1 MTR_0168s0120 45.455 77 41 1 1 76 37 113 5.67e-14 64.3
MS.gene074045.t1 MTR_6g025320 100.000 113 0 0 37 149 1 113 1.13e-78 228
MS.gene074045.t1 MTR_6g025320 45.455 77 41 1 1 76 37 113 5.67e-14 64.3
MS.gene074045.t1 MTR_7g115040 62.838 148 55 0 1 148 1 148 2.22e-57 176
MS.gene074045.t1 MTR_1g071150 58.503 147 60 1 1 147 1 146 4.38e-57 175
MS.gene074045.t1 MTR_1g071150 40.260 77 45 1 73 149 1 76 6.47e-12 59.7
MS.gene074045.t1 MTR_5g011850 51.007 149 71 1 1 149 1 147 4.66e-49 154
MS.gene074045.t1 MTR_3g055570 53.425 146 53 1 1 146 41 171 2.87e-43 141
MS.gene074045.t1 MTR_8g066630 45.946 148 77 1 4 148 9 156 3.36e-43 140
MS.gene074045.t1 MTR_7g074020 45.455 143 78 0 4 146 22 164 4.77e-39 130
MS.gene074045.t1 MTR_7g074020 46.970 66 35 0 84 149 29 94 3.17e-12 61.2
MS.gene074045.t1 MTR_1g032070 47.945 146 72 1 4 149 42 183 3.79e-37 126
MS.gene074045.t1 MTR_6g007613 44.056 143 80 0 4 146 21 163 4.01e-37 125
MS.gene074045.t1 MTR_6g007613 43.421 76 43 0 74 149 18 93 2.05e-12 61.6
MS.gene074045.t1 MTR_3g055520 46.897 145 62 1 1 145 41 170 1.35e-36 124
MS.gene074045.t1 MTR_4g112460 43.262 141 78 1 8 146 7 147 1.65e-36 123
MS.gene074045.t1 MTR_4g112460 46.875 64 34 0 16 79 90 153 1.40e-12 62.0
MS.gene074045.t1 MTR_7g074020 47.244 127 67 0 4 130 22 148 2.65e-35 120
MS.gene074045.t1 MTR_7g074020 46.970 66 35 0 84 149 29 94 1.94e-12 61.6
MS.gene074045.t1 MTR_3g055585 46.207 145 63 1 1 145 41 170 1.86e-34 118
MS.gene074045.t1 MTR_8g069915 42.657 143 80 1 6 146 6 148 4.90e-34 117
MS.gene074045.t1 MTR_8g105230 48.855 131 67 0 12 142 36 166 9.08e-34 117
MS.gene074045.t1 MTR_8g105230 54.688 64 29 0 6 69 103 166 4.55e-16 71.6
MS.gene074045.t1 MTR_6g007613 45.669 127 69 0 4 130 21 147 1.98e-33 115
MS.gene074045.t1 MTR_6g007613 43.421 76 43 0 74 149 18 93 1.04e-12 62.0
MS.gene074045.t1 MTR_4g067270 44.928 138 74 1 11 146 4 141 7.73e-33 114
MS.gene074045.t1 MTR_4g067270 44.118 68 36 1 8 73 74 141 8.98e-11 57.0
MS.gene074045.t1 MTR_8g107110 44.444 135 74 1 12 146 24 157 1.01e-31 111
MS.gene074045.t1 MTR_8g107110 43.284 67 38 0 7 73 91 157 2.74e-12 61.2
MS.gene074045.t1 MTR_3g055490 68.000 75 24 0 1 75 41 115 4.22e-31 108
MS.gene074045.t1 MTR_5g079340 42.963 135 76 1 12 146 4 137 1.13e-30 107
MS.gene074045.t1 MTR_5g079340 39.706 68 41 0 8 75 72 139 3.77e-11 57.8
MS.gene074045.t1 MTR_3g067610 42.963 135 73 1 12 146 5 135 1.58e-28 102
MS.gene074045.t1 MTR_3g067610 43.750 64 36 0 12 75 74 137 6.61e-13 62.4
MS.gene074045.t1 MTR_1g046950 39.416 137 81 1 12 146 4 140 3.74e-28 101
MS.gene074045.t1 MTR_1g046950 43.750 64 36 0 12 75 79 142 3.29e-12 60.5
MS.gene074045.t1 MTR_6g079570 40.288 139 81 2 12 149 26 163 4.02e-27 100
MS.gene074045.t1 MTR_6g079570 43.836 73 41 0 6 78 93 165 6.88e-13 63.2
MS.gene074045.t1 MTR_5g092810 40.268 149 85 3 1 148 386 531 8.66e-27 104
MS.gene074045.t1 MTR_7g106710 41.096 146 83 2 1 146 429 571 9.24e-27 104
MS.gene074045.t1 MTR_1g047100 37.681 138 85 1 12 148 4 141 1.13e-26 97.8
MS.gene074045.t1 MTR_7g089760 44.286 140 76 1 11 148 4 143 1.17e-26 98.2
MS.gene074045.t1 MTR_7g075040 40.000 145 78 3 11 146 46 190 2.36e-26 98.6
MS.gene074045.t1 MTR_7g090450 40.816 147 82 3 5 146 66 212 3.10e-26 99.0
MS.gene074045.t1 MTR_4g132070 39.456 147 85 3 1 146 385 528 3.47e-26 103
MS.gene074045.t1 MTR_8g036075 39.189 148 82 3 7 146 44 191 1.55e-25 96.7
MS.gene074045.t1 MTR_1g096490 39.865 148 82 3 1 146 324 466 2.01e-25 100
MS.gene074045.t1 MTR_8g095440 38.356 146 87 2 1 146 324 466 2.23e-25 100
MS.gene074045.t1 MTR_1g026190 37.162 148 87 3 1 146 376 519 2.28e-25 100
MS.gene074045.t1 MTR_4g115170 40.523 153 73 2 12 146 64 216 3.56e-25 96.3
MS.gene074045.t1 MTR_4g107490 37.838 148 87 4 1 146 367 511 4.09e-25 100
MS.gene074045.t1 MTR_1g055255 37.671 146 88 2 1 146 418 560 4.20e-25 100
MS.gene074045.t1 MTR_3g098070 36.986 146 89 2 1 146 323 465 6.07e-25 99.4
MS.gene074045.t1 MTR_5g009830 38.514 148 85 3 1 146 360 503 7.91e-25 99.4
MS.gene074045.t1 MTR_3g051770 37.662 154 89 2 1 148 377 529 1.72e-24 98.2
MS.gene074045.t1 MTR_3g098090 36.986 146 89 2 1 146 326 468 5.57e-24 96.7
MS.gene074045.t1 MTR_8g099095 37.162 148 87 3 1 146 360 503 1.72e-23 95.5
MS.gene074045.t1 MTR_5g099240 35.616 146 91 2 1 146 318 460 6.92e-23 93.6
MS.gene074045.t1 MTR_1g054865 35.616 146 91 2 1 146 455 597 7.51e-23 93.6
MS.gene074045.t1 MTR_5g099240 35.616 146 91 2 1 146 390 532 8.93e-23 93.6
MS.gene074045.t1 MTR_7g068710 35.616 146 93 1 1 146 350 494 9.53e-23 93.2
MS.gene074045.t1 MTR_1g041150 34.932 146 92 2 1 146 412 554 1.79e-22 92.8
MS.gene074045.t1 MTR_0028s0170 36.986 146 90 2 1 146 372 515 4.67e-22 91.3
MS.gene074045.t1 MTR_2g098890 41.429 140 78 2 11 146 63 202 8.34e-22 87.0
MS.gene074045.t1 MTR_4g086260 35.766 137 86 1 10 146 55 189 1.55e-21 86.3
MS.gene074045.t1 MTR_4g103650 35.714 140 80 3 12 147 2 135 1.70e-21 84.3
MS.gene074045.t1 MTR_5g089320 36.054 147 90 3 1 146 362 505 2.02e-21 89.7
MS.gene074045.t1 MTR_3g055510 38.194 144 36 2 1 144 41 131 2.45e-21 84.0
MS.gene074045.t1 MTR_3g089070 32.374 139 83 2 13 146 7 139 3.10e-21 84.0
MS.gene074045.t1 MTR_3g089090 32.374 139 83 2 13 146 6 138 3.26e-21 84.0
MS.gene074045.t1 MTR_5g027000 32.847 137 92 0 6 142 16 152 7.71e-21 83.6
MS.gene074045.t1 MTR_4g132040 35.374 147 90 4 1 146 390 532 8.57e-21 87.8
MS.gene074045.t1 MTR_4g066660 34.694 147 93 3 1 147 366 509 8.67e-21 87.8
MS.gene074045.t1 MTR_7g106710 37.671 146 83 3 1 146 429 566 1.01e-20 87.8
MS.gene074045.t1 MTR_3g055480 64.815 54 19 0 93 146 53 106 1.36e-20 81.6
MS.gene074045.t1 MTR_3g055480 42.667 75 36 1 1 75 41 108 3.32e-13 62.4
MS.gene074045.t1 MTR_4g103655 34.286 140 82 3 12 147 6 139 6.32e-20 80.5
MS.gene074045.t1 MTR_1g052530 31.081 148 101 1 1 148 346 492 7.16e-20 85.1
MS.gene074045.t1 MTR_4g103630 34.286 140 82 3 12 147 6 139 8.44e-20 80.1
MS.gene074045.t1 MTR_5g017550 36.029 136 86 1 12 147 48 182 1.64e-19 80.5
MS.gene074045.t1 MTR_7g091890 31.081 148 101 1 1 148 352 498 2.07e-19 84.0
MS.gene074045.t1 MTR_6g023460 28.571 140 99 1 8 147 4 142 3.95e-19 78.6
MS.gene074045.t1 MTR_5g008705 31.250 128 88 0 19 146 1 128 1.71e-18 76.6
MS.gene074045.t1 MTR_5g017510 35.000 140 83 3 12 147 48 183 1.27e-17 75.9
MS.gene074045.t1 MTR_5g017560 35.000 140 83 3 12 147 48 183 1.27e-17 75.9
MS.gene074045.t1 MTR_8g078270 32.593 135 89 2 13 146 54 187 1.84e-17 75.5
MS.gene074045.t1 MTR_7g074240 32.192 146 87 2 13 146 25 170 3.98e-16 71.6
MS.gene074045.t1 MTR_5g008695 33.036 112 73 1 36 145 1 112 6.22e-15 67.0
MS.gene074045.t1 MTR_3g083470 47.059 68 36 0 6 73 150 217 3.24e-14 67.4
MS.gene074045.t1 MTR_3g083470 32.847 137 82 1 11 147 92 218 1.01e-13 66.2
MS.gene074045.t1 MTR_5g022030 27.632 152 98 4 1 146 395 540 9.51e-14 67.8
MS.gene074045.t1 MTR_5g089440 36.364 99 60 2 49 146 80 176 5.79e-12 60.8
MS.gene074045.t1 MTR_4g082050 44.595 74 41 0 73 146 65 138 7.97e-12 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074045.t1 AT3G43810 100.000 148 0 0 1 148 1 148 1.23e-106 303
MS.gene074045.t1 AT3G43810 45.455 77 41 1 73 149 1 76 4.73e-13 64.3
MS.gene074045.t1 AT3G43810 100.000 149 0 0 1 149 1 149 2.30e-106 300
MS.gene074045.t1 AT2G27030 99.329 149 1 0 1 149 1 149 3.89e-106 300
MS.gene074045.t1 AT2G27030 44.304 79 43 1 1 78 73 151 1.76e-13 64.7
MS.gene074045.t1 AT5G21274 99.329 149 1 0 1 149 1 149 7.29e-106 298
MS.gene074045.t1 AT3G56800 99.329 149 1 0 1 149 1 149 8.69e-106 298
MS.gene074045.t1 AT2G27030 99.329 149 1 0 1 149 1 149 8.69e-106 298
MS.gene074045.t1 AT2G41110 99.329 149 1 0 1 149 1 149 8.69e-106 298
MS.gene074045.t1 AT5G37780 97.315 149 4 0 1 149 1 149 2.36e-104 295
MS.gene074045.t1 AT1G66410 97.315 149 4 0 1 149 1 149 2.36e-104 295
MS.gene074045.t1 AT2G41110 91.925 161 1 1 1 149 1 161 7.00e-102 289
MS.gene074045.t1 AT1G66410 91.195 159 4 1 1 149 1 159 4.92e-101 286
MS.gene074045.t1 AT5G37780 88.415 164 4 1 1 149 1 164 4.49e-100 284
MS.gene074045.t1 AT5G37780 82.857 175 4 1 1 149 1 175 3.48e-98 280
MS.gene074045.t1 AT5G37780 97.581 124 3 0 26 149 13 136 6.82e-86 247
MS.gene074045.t1 AT5G37780 45.455 77 41 1 1 76 60 136 6.42e-14 64.7
MS.gene074045.t1 AT3G22930 76.389 144 34 0 4 147 27 170 5.02e-80 234
MS.gene074045.t1 AT4G14640 74.825 143 36 0 5 147 6 148 3.50e-79 231
MS.gene074045.t1 AT3G43810 100.000 113 0 0 37 149 1 113 1.19e-78 228
MS.gene074045.t1 AT3G43810 45.455 77 41 1 1 76 37 113 5.94e-14 64.3
MS.gene074045.t1 AT3G43810 100.000 113 0 0 37 149 1 113 1.19e-78 228
MS.gene074045.t1 AT3G43810 45.455 77 41 1 1 76 37 113 5.94e-14 64.3
MS.gene074045.t1 AT1G66410 97.345 113 3 0 37 149 1 113 3.29e-77 224
MS.gene074045.t1 AT1G66410 45.455 77 41 1 1 76 37 113 1.48e-14 65.9
MS.gene074045.t1 AT1G66410 97.345 113 3 0 37 149 1 113 3.29e-77 224
MS.gene074045.t1 AT1G66410 45.455 77 41 1 1 76 37 113 1.48e-14 65.9
MS.gene074045.t1 AT4G14640 72.951 122 33 0 26 147 9 130 1.22e-65 196
MS.gene074045.t1 AT4G14640 46.774 62 33 0 12 73 68 129 4.16e-13 62.8
MS.gene074045.t1 AT2G41090 64.430 149 50 1 1 149 1 146 5.52e-61 186
MS.gene074045.t1 AT2G41100 57.229 166 54 2 1 149 55 220 1.55e-54 173
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 148 238 5.84e-31 112
MS.gene074045.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.66e-29 108
MS.gene074045.t1 AT2G41100 57.229 166 54 2 1 149 55 220 1.55e-54 173
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 148 238 5.84e-31 112
MS.gene074045.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.66e-29 108
MS.gene074045.t1 AT2G41100 57.229 166 54 2 1 149 55 220 1.55e-54 173
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 148 238 5.84e-31 112
MS.gene074045.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.66e-29 108
MS.gene074045.t1 AT2G41100 57.229 166 54 2 1 149 90 255 4.07e-54 173
MS.gene074045.t1 AT2G41100 51.852 162 62 2 1 146 1 162 4.72e-50 163
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 183 273 1.18e-30 112
MS.gene074045.t1 AT2G41100 57.229 166 54 2 1 149 90 255 4.07e-54 173
MS.gene074045.t1 AT2G41100 51.852 162 62 2 1 146 1 162 4.72e-50 163
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 183 273 1.18e-30 112
MS.gene074045.t1 AT4G14640 73.786 103 27 0 5 107 6 108 6.86e-54 166
MS.gene074045.t1 AT3G22930 73.786 103 27 0 4 106 27 129 3.44e-52 162
MS.gene074045.t1 AT3G22930 46.774 62 33 0 85 146 35 96 3.36e-11 57.8
MS.gene074045.t1 AT1G12310 49.660 147 72 1 3 149 4 148 4.35e-47 150
MS.gene074045.t1 AT1G62820 48.980 147 73 1 3 149 4 148 8.65e-47 149
MS.gene074045.t1 AT3G51920 50.676 148 73 0 1 148 1 148 2.25e-46 148
MS.gene074045.t1 AT1G32250 42.763 152 81 1 1 146 5 156 9.36e-41 134
MS.gene074045.t1 AT3G50360 47.183 142 75 0 5 146 20 161 8.82e-40 132
MS.gene074045.t1 AT3G50360 45.714 70 38 0 80 149 22 91 4.38e-13 63.5
MS.gene074045.t1 AT4G37010 43.662 142 80 0 5 146 24 165 1.31e-35 121
MS.gene074045.t1 AT4G37010 43.662 142 80 0 5 146 20 161 1.69e-35 121
MS.gene074045.t1 AT2G41100 53.077 130 44 2 37 149 1 130 4.04e-35 121
MS.gene074045.t1 AT2G41100 62.766 94 32 1 4 97 58 148 4.33e-32 113
MS.gene074045.t1 AT2G41100 61.856 97 34 1 1 97 1 94 5.20e-35 119
MS.gene074045.t1 AT2G41100 50.649 77 37 1 73 149 1 76 1.48e-17 74.7
MS.gene074045.t1 AT1G18530 42.069 145 76 2 7 146 2 143 7.51e-34 116
MS.gene074045.t1 AT1G18530 42.647 68 39 0 12 79 82 149 1.52e-11 59.3
MS.gene074045.t1 AT1G24620 46.763 139 73 1 9 147 34 171 2.24e-33 116
MS.gene074045.t1 AT1G24620 49.254 67 34 0 7 73 105 171 1.80e-13 64.7
MS.gene074045.t1 AT3G25600 41.060 151 81 2 1 146 1 148 9.37e-33 114
MS.gene074045.t1 AT3G25600 41.176 68 40 0 12 79 87 154 2.12e-11 58.9
MS.gene074045.t1 AT3G03000 43.836 146 81 1 4 148 12 157 3.03e-32 112
MS.gene074045.t1 AT1G18210 42.222 135 74 1 12 146 23 153 4.12e-31 110
MS.gene074045.t1 AT1G18210 42.222 135 74 1 12 146 23 153 4.12e-31 110
MS.gene074045.t1 AT1G05990 44.604 139 74 2 11 146 4 142 4.27e-31 109
MS.gene074045.t1 AT1G66400 43.478 138 76 1 12 147 15 152 5.97e-31 109
MS.gene074045.t1 AT5G37770 42.446 139 76 1 12 146 17 155 8.24e-30 106
MS.gene074045.t1 AT5G37770 44.615 65 36 0 10 74 92 156 1.37e-13 64.7
MS.gene074045.t1 AT5G37770 42.446 139 76 1 12 146 17 155 8.24e-30 106
MS.gene074045.t1 AT5G37770 44.615 65 36 0 10 74 92 156 1.37e-13 64.7
MS.gene074045.t1 AT1G73630 40.146 137 78 1 12 148 20 152 1.98e-29 105
MS.gene074045.t1 AT4G03290 45.390 141 72 2 11 146 4 144 2.39e-29 105
MS.gene074045.t1 AT4G03290 46.875 64 32 1 14 75 83 146 1.91e-11 58.9
MS.gene074045.t1 AT2G43290 42.657 143 75 3 11 146 64 206 2.42e-29 106
MS.gene074045.t1 AT1G76040 41.096 146 84 2 1 146 167 310 4.62e-29 108
MS.gene074045.t1 AT1G76040 41.096 146 84 2 1 146 167 310 4.62e-29 108
MS.gene074045.t1 AT1G76040 41.096 146 84 2 1 146 405 548 6.18e-28 108
MS.gene074045.t1 AT3G59440 42.336 137 76 2 12 146 51 186 3.68e-27 100
MS.gene074045.t1 AT2G15680 37.324 142 87 1 5 146 43 182 1.24e-26 99.0
MS.gene074045.t1 AT5G23580 39.726 146 85 2 1 146 316 458 1.66e-26 103
MS.gene074045.t1 AT4G21940 39.597 149 86 3 1 148 395 540 6.57e-26 102
MS.gene074045.t1 AT4G21940 39.597 149 86 3 1 148 395 540 8.20e-26 102
MS.gene074045.t1 AT4G12860 40.580 138 80 1 11 146 4 141 2.98e-25 94.7
MS.gene074045.t1 AT4G23650 38.514 148 85 3 1 146 372 515 3.61e-25 100
MS.gene074045.t1 AT4G23650 43.478 69 36 1 82 147 377 445 4.98e-11 59.7
MS.gene074045.t1 AT1G35670 37.671 146 88 2 1 146 320 462 4.40e-25 99.8
MS.gene074045.t1 AT4G09570 38.514 148 84 3 1 146 319 461 6.44e-25 99.4
MS.gene074045.t1 AT3G07490 41.304 138 79 1 11 146 4 141 7.03e-25 93.6
MS.gene074045.t1 AT4G04720 38.255 149 88 3 1 148 373 518 1.37e-24 98.6
MS.gene074045.t1 AT4G04720 38.255 149 88 3 1 148 373 518 1.37e-24 98.6
MS.gene074045.t1 AT3G10660 36.301 146 90 2 1 146 480 622 2.04e-24 98.2
MS.gene074045.t1 AT3G10660 36.301 146 90 2 1 146 480 622 2.04e-24 98.2
MS.gene074045.t1 AT4G38230 36.986 146 89 2 1 146 174 316 2.19e-24 96.7
MS.gene074045.t1 AT5G19360 40.136 147 84 3 1 146 362 505 2.56e-24 97.8
MS.gene074045.t1 AT4G38230 36.986 146 89 2 1 146 318 460 6.18e-24 96.7
MS.gene074045.t1 AT4G38230 36.986 146 89 2 1 146 318 460 6.18e-24 96.7
MS.gene074045.t1 AT4G38230 36.986 146 89 2 1 146 348 490 6.31e-24 96.7
MS.gene074045.t1 AT1G61950 38.514 148 85 3 1 146 393 536 6.45e-24 96.7
MS.gene074045.t1 AT3G10190 40.146 137 79 3 12 146 70 205 6.84e-24 92.4
MS.gene074045.t1 AT5G12180 39.456 147 85 3 1 146 367 510 1.11e-23 95.9
MS.gene074045.t1 AT5G04870 35.616 146 91 2 1 146 444 586 2.15e-23 95.5
MS.gene074045.t1 AT1G74740 35.570 149 93 3 1 148 353 499 4.14e-23 94.4
MS.gene074045.t1 AT3G20410 36.301 146 91 2 1 146 385 528 9.87e-23 93.2
MS.gene074045.t1 AT3G20410 36.301 146 91 2 1 146 385 528 9.87e-23 93.2
MS.gene074045.t1 AT2G17290 35.616 146 91 2 1 146 379 521 1.51e-22 92.8
MS.gene074045.t1 AT2G17290 35.616 146 91 2 1 146 379 521 1.51e-22 92.8
MS.gene074045.t1 AT3G50770 36.429 140 84 2 12 146 64 203 2.04e-22 88.6
MS.gene074045.t1 AT3G50770 44.118 68 38 0 82 149 61 128 8.17e-13 63.5
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT4G04740 36.986 146 88 3 2 146 363 505 4.05e-22 91.7
MS.gene074045.t1 AT2G38910 34.932 146 92 2 1 146 428 570 4.44e-22 91.7
MS.gene074045.t1 AT4G04695 36.242 149 91 3 1 148 325 470 4.53e-22 91.3
MS.gene074045.t1 AT4G35310 34.932 146 92 2 1 146 391 533 4.74e-22 91.7
MS.gene074045.t1 AT4G35310 34.932 146 92 2 1 146 391 533 4.74e-22 91.7
MS.gene074045.t1 AT5G17470 37.500 136 82 2 15 148 5 139 5.73e-22 85.9
MS.gene074045.t1 AT5G17470 47.541 61 32 0 14 74 79 139 2.72e-12 60.8
MS.gene074045.t1 AT1G50700 34.932 146 93 2 1 146 367 510 8.27e-22 90.9
MS.gene074045.t1 AT4G04700 38.095 147 87 3 1 146 325 468 1.43e-21 90.1
MS.gene074045.t1 AT5G42380 36.232 138 87 1 10 146 47 184 2.09e-21 85.5
MS.gene074045.t1 AT1G18890 37.333 150 89 4 1 148 357 503 5.07e-21 88.6
MS.gene074045.t1 AT3G57530 35.374 147 91 3 1 146 357 500 1.15e-20 87.4
MS.gene074045.t1 AT5G12480 34.228 149 96 2 1 148 259 406 1.18e-20 87.0
MS.gene074045.t1 AT2G36180 41.176 136 76 3 15 147 3 137 1.35e-20 82.4
MS.gene074045.t1 AT5G12480 34.228 149 96 2 1 148 353 500 1.42e-20 87.4
MS.gene074045.t1 AT3G03400 37.600 125 76 1 17 139 10 134 2.23e-20 81.6
MS.gene074045.t1 AT3G03410 35.556 135 78 1 14 148 4 129 9.45e-20 79.7
MS.gene074045.t1 AT3G51850 32.877 146 97 1 1 146 348 492 1.00e-19 84.7
MS.gene074045.t1 AT2G41410 34.459 148 94 3 4 148 62 209 1.39e-19 81.6
MS.gene074045.t1 AT5G19450 32.215 149 99 2 1 148 351 498 7.44e-19 82.4
MS.gene074045.t1 AT5G19450 32.215 149 99 2 1 148 351 498 7.44e-19 82.4
MS.gene074045.t1 AT4G04710 34.694 147 92 3 1 146 312 455 9.92e-19 82.0
MS.gene074045.t1 AT4G04710 34.694 147 92 3 1 146 326 469 1.00e-18 82.0
MS.gene074045.t1 AT4G04710 34.694 147 92 3 1 146 339 482 1.05e-18 82.0
MS.gene074045.t1 AT2G41860 31.507 146 99 1 1 146 348 492 7.24e-18 79.3
MS.gene074045.t1 AT2G41860 31.507 146 99 1 1 146 348 492 7.82e-18 79.3
MS.gene074045.t1 AT4G04710 34.899 149 91 4 1 146 339 484 1.44e-17 78.6
MS.gene074045.t1 AT1G50700 30.233 172 92 3 1 146 367 536 2.14e-17 78.2
MS.gene074045.t1 AT2G31500 32.000 150 97 4 1 147 360 507 9.42e-17 76.3
MS.gene074045.t1 AT4G20780 33.775 151 78 3 17 146 34 183 1.39e-16 73.2
MS.gene074045.t1 AT4G04740 34.848 132 82 3 2 132 363 491 4.38e-16 74.3
MS.gene074045.t1 AT5G44460 33.566 143 83 2 16 146 32 174 3.61e-15 69.3
MS.gene074045.t1 AT1G76040 36.634 101 63 1 1 101 405 504 1.42e-14 70.1
MS.gene074045.t1 AT4G21940 37.374 99 61 1 1 99 395 492 2.23e-14 69.3
MS.gene074045.t1 AT1G76650 32.168 143 90 2 7 146 38 176 3.62e-14 66.6
MS.gene074045.t1 AT1G76650 32.168 143 90 2 7 146 38 176 3.62e-14 66.6
MS.gene074045.t1 AT5G66210 27.632 152 98 4 1 146 358 503 4.33e-14 68.6
MS.gene074045.t1 AT5G66210 27.632 152 98 4 1 146 358 503 4.33e-14 68.6
MS.gene074045.t1 AT2G17890 27.632 152 98 5 1 146 404 549 5.19e-14 68.6
MS.gene074045.t1 AT3G51850 33.962 106 69 1 1 106 348 452 5.26e-14 68.6
MS.gene074045.t1 AT1G76640 31.852 135 86 2 16 146 26 158 8.12e-14 65.1
MS.gene074045.t1 AT5G49480 28.758 153 101 3 1 146 7 158 5.52e-13 63.2
MS.gene074045.t1 AT1G21550 30.719 153 82 4 11 147 9 153 1.14e-12 62.0
MS.gene074045.t1 AT1G50700 35.354 99 63 1 1 99 367 464 1.55e-12 64.3
MS.gene074045.t1 AT1G76650 31.469 143 81 3 7 146 38 166 1.38e-11 59.3
MS.gene074045.t1 AT5G66210 26.718 131 90 3 1 125 358 488 2.60e-11 60.8
MS.gene074045.t1 AT4G36070 27.273 154 100 5 1 148 367 514 7.34e-11 59.3
MS.gene074045.t1 AT4G36070 27.273 154 100 5 1 148 367 514 7.55e-11 59.3

Find 41 sgRNAs with CRISPR-Local

Find 161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGCTGAAAGAGGCGTTTC+GGG 0.325103 6.1:-8048247 MS.gene074045:CDS
CCCAACTGAGGCAGAGCTTC+AGG 0.327616 6.1:-8048370 MS.gene074045:CDS
GGAACTGTTATGCGTTCATT+GGG 0.343588 6.1:-8048399 MS.gene074045:CDS
TGGAACTGTTATGCGTTCAT+TGG 0.360083 6.1:-8048400 MS.gene074045:CDS
AGGAGCTGAAAGAGGCGTTT+CGG 0.391958 6.1:-8048248 MS.gene074045:CDS
AGCTTTCAGCTTATTCGATA+AGG 0.414465 6.1:-8051147 MS.gene074045:CDS
TCCTGAAGCTCTGCCTCAGT+TGG 0.419465 6.1:+8048369 None:intergenic
TGATCAGATCTCTGAGTTCA+AGG 0.430216 6.1:-8051171 MS.gene074045:CDS
CCTGAAGCTCTGCCTCAGTT+GGG 0.457983 6.1:+8048370 None:intergenic
AAACTATGAGGAATTCGTTA+AGG 0.465882 6.1:-8048088 MS.gene074045:CDS
ATCCGTGAGGCTGATGTTGA+TGG 0.484617 6.1:-8048123 MS.gene074045:CDS
TGCATCACAACCAAGGAGCT+TGG 0.485199 6.1:-8048420 MS.gene074045:CDS
CGCCTCTTTCAGCTCCTCCT+CGG 0.490822 6.1:+8048254 None:intergenic
CATAACAGTTCCAAGCTCCT+TGG 0.491995 6.1:+8048410 None:intergenic
CCCTGAGTTTCTTAACCTCA+TGG 0.495316 6.1:-8048301 MS.gene074045:CDS
CATCGGTGAGCTTCTCGCCA+AGG 0.508143 6.1:+8048163 None:intergenic
TTTCAGCTCCTCCTCGGAGT+CGG 0.513859 6.1:+8048260 None:intergenic
CATCTCATCGACTTCTTCAT+CGG 0.523419 6.1:+8048146 None:intergenic
GCCATGAGGTTAAGAAACTC+AGG 0.525054 6.1:+8048300 None:intergenic
TGATGGTCAAATAAACTATG+AGG 0.543599 6.1:-8048100 MS.gene074045:CDS
CTCCGAGGAGGAGCTGAAAG+AGG 0.551298 6.1:-8048256 MS.gene074045:CDS
TTCAGCTTATTCGATAAGGA+TGG 0.562759 6.1:-8051143 MS.gene074045:CDS
GGTGAGCTTCTCGCCAAGGT+TGG 0.567744 6.1:+8048167 None:intergenic
CGTCATGTGATGACCAACCT+TGG 0.582821 6.1:-8048180 MS.gene074045:CDS
CCTTCATCTTCCTTGCCATG+AGG 0.583416 6.1:+8048286 None:intergenic
CCTCATGGCAAGGAAGATGA+AGG 0.591761 6.1:-8048286 MS.gene074045:CDS
ATCAATGAAGTAGATGCTGA+TGG 0.594359 6.1:-8048342 MS.gene074045:CDS
CACCATCAACATCAGCCTCA+CGG 0.595594 6.1:+8048121 None:intergenic
GGAATTCGTTAAGGTCATGA+TGG 0.606742 6.1:-8048079 MS.gene074045:CDS
AGTTTCTTAACCTCATGGCA+AGG 0.615477 6.1:-8048296 MS.gene074045:CDS
GAGGCTGATGTTGATGGTGA+TGG 0.620773 6.1:-8048117 MS.gene074045:CDS
GAAGTAGATGCTGATGGGAA+TGG 0.624358 6.1:-8048336 MS.gene074045:CDS
CCATGAGGTTAAGAAACTCA+GGG 0.643314 6.1:+8048301 None:intergenic
TTATTCGATAAGGATGGCGA+TGG 0.647329 6.1:-8051137 MS.gene074045:intron
TGCAGGTTGCATCACAACCA+AGG 0.653135 6.1:-8048427 MS.gene074045:intron
GAACTGTTATGCGTTCATTG+GGG 0.667564 6.1:-8048398 MS.gene074045:CDS
GATGAAGGACACCGACTCCG+AGG 0.669209 6.1:-8048271 MS.gene074045:CDS
TCAATGAAGTAGATGCTGAT+GGG 0.676011 6.1:-8048341 MS.gene074045:CDS
GAAGGACACCGACTCCGAGG+AGG 0.689648 6.1:-8048268 MS.gene074045:CDS
ATTGGGGCAAAACCCAACTG+AGG 0.728233 6.1:-8048382 MS.gene074045:CDS
AGTCGATGAGATGATCCGTG+AGG 0.760734 6.1:-8048136 MS.gene074045:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAATTAACAAAATCAA+AGG + chr6.1:8048343-8048362 None:intergenic 15.0%
!! AAACAATCTACAAAAAAAAA+AGG + chr6.1:8048172-8048191 None:intergenic 15.0%
!!! AACTTTTATTCATGATAATA+TGG + chr6.1:8050447-8050466 None:intergenic 15.0%
!!! GTTGTTGATTATTATATATA+TGG - chr6.1:8050804-8050823 MS.gene074045:intron 15.0%
!!! TTAATTTGTTTTGAATTTCA+TGG - chr6.1:8048352-8048371 MS.gene074045:CDS 15.0%
!! AACCATAGGAAAAATATTTA+TGG + chr6.1:8049288-8049307 None:intergenic 20.0%
!! ACAACACTTTCTATTAAATA+GGG - chr6.1:8050047-8050066 MS.gene074045:intron 20.0%
!! ATCATTTAACCATTATATCA+AGG + chr6.1:8049205-8049224 None:intergenic 20.0%
!! CGATTCTCTTAAATTATTAT+CGG + chr6.1:8048847-8048866 None:intergenic 20.0%
!! CTGGTTATTAATTACAAAAA+GGG + chr6.1:8049127-8049146 None:intergenic 20.0%
!! GAAAAAAGTTAAATACATGT+TGG - chr6.1:8049695-8049714 MS.gene074045:intron 20.0%
!! TACTTACTACTTTATAATGA+CGG - chr6.1:8048808-8048827 MS.gene074045:intron 20.0%
!! TATTTCATTCAATCAAATAC+AGG + chr6.1:8050252-8050271 None:intergenic 20.0%
!! TTATTATGTGTTGTCAATAA+CGG - chr6.1:8049392-8049411 MS.gene074045:intron 20.0%
!! TTCAAATTCTACTATGATAT+AGG - chr6.1:8050093-8050112 MS.gene074045:intron 20.0%
!!! AATCAATAACACTTTGAAAA+AGG + chr6.1:8049834-8049853 None:intergenic 20.0%
!!! ATCAATAACACTTTGAAAAA+GGG + chr6.1:8049833-8049852 None:intergenic 20.0%
!!! ATCCATAAATATTTTTCCTA+TGG - chr6.1:8049283-8049302 MS.gene074045:intron 20.0%
!!! TCAAAGTATATGTTTTTCAA+TGG + chr6.1:8049658-8049677 None:intergenic 20.0%
!!! TTTTTCATTCAATCAAATTG+AGG + chr6.1:8049681-8049700 None:intergenic 20.0%
! AAACTCTCATCTTGATTTAA+TGG - chr6.1:8049771-8049790 MS.gene074045:intron 25.0%
! ATTAGCGACATAACTAAAAT+GGG + chr6.1:8050608-8050627 None:intergenic 25.0%
! ATTAGTTAGATGATTATGGT+TGG + chr6.1:8050690-8050709 None:intergenic 25.0%
! CCTATTTAACACTAACAATT+CGG + chr6.1:8049077-8049096 None:intergenic 25.0%
! GACAACACTTTCTATTAAAT+AGG - chr6.1:8050046-8050065 MS.gene074045:intron 25.0%
! GAGAATTAGTTAGATGATTA+TGG + chr6.1:8050694-8050713 None:intergenic 25.0%
! GATTCACTATTTAGTACAAA+GGG + chr6.1:8049483-8049502 None:intergenic 25.0%
! GCTGGTTATTAATTACAAAA+AGG + chr6.1:8049128-8049147 None:intergenic 25.0%
! TAAAGATTATGATTCCAATG+AGG - chr6.1:8049153-8049172 MS.gene074045:intron 25.0%
! TAACTAATTCTCATCTAACT+AGG - chr6.1:8050702-8050721 MS.gene074045:intron 25.0%
! TAAGAAGTCATTTGCTTATA+GGG - chr6.1:8050755-8050774 MS.gene074045:intron 25.0%
! TAGTTTATTACGATAGTGAT+AGG - chr6.1:8048624-8048643 MS.gene074045:intron 25.0%
! TATTAGCGACATAACTAAAA+TGG + chr6.1:8050609-8050628 None:intergenic 25.0%
! TGATTCACTATTTAGTACAA+AGG + chr6.1:8049484-8049503 None:intergenic 25.0%
! TTATTCAGTATTGTCAATAG+CGG - chr6.1:8049971-8049990 MS.gene074045:intron 25.0%
! TTTGTAATTAATAACCAGCA+AGG - chr6.1:8049129-8049148 MS.gene074045:intron 25.0%
!! AAAGAAAATTGCGATTTGTT+AGG - chr6.1:8048529-8048548 MS.gene074045:intron 25.0%
!! ATCTTGTTATGTCATTTGAA+GGG - chr6.1:8049619-8049638 MS.gene074045:intron 25.0%
!! TATCTTGTTATGTCATTTGA+AGG - chr6.1:8049618-8049637 MS.gene074045:intron 25.0%
!! TTAGAAATTTTCCTAGGTTT+TGG - chr6.1:8048313-8048332 MS.gene074045:CDS 25.0%
!!! AAGTGTTATTGACATTTTTG+TGG - chr6.1:8049255-8049274 MS.gene074045:intron 25.0%
!!! TATGATAGTTCTAACTTCTA+AGG - chr6.1:8048579-8048598 MS.gene074045:intron 25.0%
!!! TGACATGTTTTGAAAGATAT+GGG - chr6.1:8049933-8049952 MS.gene074045:intron 25.0%
!!! TTTGGATTAGAAATTTTCCT+AGG - chr6.1:8048307-8048326 MS.gene074045:CDS 25.0%
AAACTATGAGGAATTCGTTA+AGG - chr6.1:8051174-8051193 MS.gene074045:CDS 30.0%
AACGGATCAAAGCAAATAAT+GGG - chr6.1:8049410-8049429 MS.gene074045:intron 30.0%
ATCATAATCTTTATCCTTGC+TGG + chr6.1:8049146-8049165 None:intergenic 30.0%
ATGACTTTGATTACAAGTGT+TGG + chr6.1:8048934-8048953 None:intergenic 30.0%
ATGTGGCTTATATACTAGTA+GGG - chr6.1:8049726-8049745 MS.gene074045:intron 30.0%
CCGAATTGTTAGTGTTAAAT+AGG - chr6.1:8049074-8049093 MS.gene074045:intron 30.0%
GTAAGAAGTCATTTGCTTAT+AGG - chr6.1:8050754-8050773 MS.gene074045:intron 30.0%
TATGTGGCTTATATACTAGT+AGG - chr6.1:8049725-8049744 MS.gene074045:intron 30.0%
TATTCAGTATTGTCAATAGC+GGG - chr6.1:8049972-8049991 MS.gene074045:intron 30.0%
TGATGGTCAAATAAACTATG+AGG - chr6.1:8051162-8051181 MS.gene074045:CDS 30.0%
TGGTTCAGATACTTGAAAAA+TGG - chr6.1:8050547-8050566 MS.gene074045:intron 30.0%
! ACATGTTGGCTATATTTATG+TGG - chr6.1:8049709-8049728 MS.gene074045:intron 30.0%
! ATTCGTAGATATTTTGCCTA+TGG - chr6.1:8049865-8049884 MS.gene074045:intron 30.0%
! TAACGGATCAAAGCAAATAA+TGG - chr6.1:8049409-8049428 MS.gene074045:intron 30.0%
!! GATTGATTTGTGATGTGATT+TGG - chr6.1:8048289-8048308 MS.gene074045:CDS 30.0%
!! TTTTGAGAAACATGACATGA+TGG - chr6.1:8049333-8049352 MS.gene074045:intron 30.0%
!!! GTGACATGTTTTGAAAGATA+TGG - chr6.1:8049932-8049951 MS.gene074045:intron 30.0%
!!! TGTATGAGTTTTGAGAAACA+TGG - chr6.1:8049906-8049925 MS.gene074045:intron 30.0%
!!! TTTGTGATGCGATTTTGATT+AGG - chr6.1:8048218-8048237 MS.gene074045:CDS 30.0%
ACACAACACTGGTAGTAATT+TGG + chr6.1:8049010-8049029 None:intergenic 35.0%
AGCTTTCAGCTTATTCGATA+AGG - chr6.1:8048115-8048134 MS.gene074045:CDS 35.0%
ATCAATGAAGTAGATGCTGA+TGG - chr6.1:8050920-8050939 MS.gene074045:intron 35.0%
ATGATTCCAATGAGGAAGTA+AGG - chr6.1:8049161-8049180 MS.gene074045:intron 35.0%
ATGTCAGTGTTGTGTTAGTA+TGG - chr6.1:8048883-8048902 MS.gene074045:intron 35.0%
ATGTGGCTTATATACGAGAA+GGG - chr6.1:8050381-8050400 MS.gene074045:intron 35.0%
CGATAGTGATAGGTAAATAC+TGG - chr6.1:8048634-8048653 MS.gene074045:intron 35.0%
GAACTCTCACCTTGATATAA+TGG - chr6.1:8049193-8049212 MS.gene074045:intron 35.0%
TAAACAAACTCACAAGCCAT+AGG + chr6.1:8049884-8049903 None:intergenic 35.0%
TAAACAAGCTCACAAACCAT+AGG + chr6.1:8049302-8049321 None:intergenic 35.0%
TATATATGGTGTGAACTTGC+AGG - chr6.1:8050818-8050837 MS.gene074045:intron 35.0%
TATGTGGCTTATATACGAGA+AGG - chr6.1:8050380-8050399 MS.gene074045:intron 35.0%
TCAAAGGAAAACCAAAACCT+AGG + chr6.1:8048327-8048346 None:intergenic 35.0%
TCAATGAAGTAGATGCTGAT+GGG - chr6.1:8050921-8050940 MS.gene074045:intron 35.0%
TGATTCCAATGAGGAAGTAA+GGG - chr6.1:8049162-8049181 MS.gene074045:intron 35.0%
TTCAGCTTATTCGATAAGGA+TGG - chr6.1:8048119-8048138 MS.gene074045:CDS 35.0%
! GTTTTTGACAAGGATCAGAA+TGG - chr6.1:8051037-8051056 MS.gene074045:intron 35.0%
!! ATTATGGTTGGTTTACATCC+TGG + chr6.1:8050678-8050697 None:intergenic 35.0%
AACTCAGTGTTGTCGAATAG+AGG + chr6.1:8049549-8049568 None:intergenic 40.0%
ACACTAACAATTCGGACCAA+AGG + chr6.1:8049069-8049088 None:intergenic 40.0%
ACATAACAATGCCAACAGCA+AGG + chr6.1:8050365-8050384 None:intergenic 40.0%
ACCTATGCAGTACAACGATT+CGG + chr6.1:8048766-8048785 None:intergenic 40.0%
AGCTTGATCTCATAACCTCA+AGG - chr6.1:8050520-8050539 MS.gene074045:intron 40.0%
AGTTGAATACACACTGACAC+TGG - chr6.1:8050271-8050290 MS.gene074045:intron 40.0%
AGTTTCTTAACCTCATGGCA+AGG - chr6.1:8050966-8050985 MS.gene074045:intron 40.0%
ATCACATGTCGATGTCATGT+TGG + chr6.1:8048965-8048984 None:intergenic 40.0%
CATAACAATGCCAACAGCAA+GGG + chr6.1:8050364-8050383 None:intergenic 40.0%
CCATAATCATCTTACTAGCC+AGG - chr6.1:8050657-8050676 MS.gene074045:intron 40.0%
CCATGAGGTTAAGAAACTCA+GGG + chr6.1:8050964-8050983 None:intergenic 40.0%
CCTGGCTAGTAAGATGATTA+TGG + chr6.1:8050660-8050679 None:intergenic 40.0%
CTTATCCCTTACTTCCTCAT+TGG + chr6.1:8049170-8049189 None:intergenic 40.0%
CTTGATCTCATAACCTCAAG+GGG - chr6.1:8050522-8050541 MS.gene074045:intron 40.0%
GAACTGTTATGCGTTCATTG+GGG - chr6.1:8050864-8050883 MS.gene074045:intron 40.0%
GCTTGATCTCATAACCTCAA+GGG - chr6.1:8050521-8050540 MS.gene074045:intron 40.0%
GGAACTGTTATGCGTTCATT+GGG - chr6.1:8050863-8050882 MS.gene074045:intron 40.0%
GGAATTCGTTAAGGTCATGA+TGG - chr6.1:8051183-8051202 MS.gene074045:CDS 40.0%
TAGTAGGGTGAGAGAAGTAA+GGG - chr6.1:8049741-8049760 MS.gene074045:intron 40.0%
TATGTCGCTAATACACTAGC+AGG - chr6.1:8050616-8050635 MS.gene074045:intron 40.0%
TCTCCAGCACTTACTAACAT+GGG + chr6.1:8050319-8050338 None:intergenic 40.0%
TGATCAGATCTCTGAGTTCA+AGG - chr6.1:8048091-8048110 MS.gene074045:CDS 40.0%
TGGAACTGTTATGCGTTCAT+TGG - chr6.1:8050862-8050881 MS.gene074045:intron 40.0%
TTATTCGATAAGGATGGCGA+TGG - chr6.1:8048125-8048144 MS.gene074045:CDS 40.0%
TTCGGATCGAATGCATAAAG+TGG + chr6.1:8048748-8048767 None:intergenic 40.0%
TTGAAAAAGGGTTGCAGATG+TGG + chr6.1:8049821-8049840 None:intergenic 40.0%
! TTGCTGTTGGCATTGTTATG+TGG - chr6.1:8050364-8050383 MS.gene074045:intron 40.0%
!! ATAGAGGTGCTACTTCATAG+TGG + chr6.1:8049533-8049552 None:intergenic 40.0%
!! CATCTCATCGACTTCTTCAT+CGG + chr6.1:8051119-8051138 None:intergenic 40.0%
!! TACAAGTGTTGGTGCTACAA+AGG + chr6.1:8048923-8048942 None:intergenic 40.0%
AGAAGGGTGAGAGATGTAAG+TGG - chr6.1:8050397-8050416 MS.gene074045:intron 45.0%
CACTGTAGTCTGTAGCATAG+TGG + chr6.1:8050009-8050028 None:intergenic 45.0%
CATAACAGTTCCAAGCTCCT+TGG + chr6.1:8050855-8050874 None:intergenic 45.0%
CCCTGAGTTTCTTAACCTCA+TGG - chr6.1:8050961-8050980 MS.gene074045:intron 45.0%
CTAGTAGGGTGAGAGAAGTA+AGG - chr6.1:8049740-8049759 MS.gene074045:intron 45.0%
CTCTCCAGCACTTACTAACA+TGG + chr6.1:8050320-8050339 None:intergenic 45.0%
GAAGTAGATGCTGATGGGAA+TGG - chr6.1:8050926-8050945 MS.gene074045:intron 45.0%
GAGAAACATGACATGATGGC+AGG - chr6.1:8049337-8049356 MS.gene074045:intron 45.0%
GCCATGAGGTTAAGAAACTC+AGG + chr6.1:8050965-8050984 None:intergenic 45.0%
GTGTTAGTATGGACACTCTC+CGG - chr6.1:8048894-8048913 MS.gene074045:intron 45.0%
TCCGAATCGTTGTACTGCAT+AGG - chr6.1:8048762-8048781 MS.gene074045:intron 45.0%
! CTTACTAACATGGGTGCTGT+TGG + chr6.1:8050310-8050329 None:intergenic 45.0%
!! CATGTTAGTAAGTGCTGGAG+AGG - chr6.1:8050318-8050337 MS.gene074045:intron 45.0%
!! GGCAGGTGTTGAAAGATACT+AGG - chr6.1:8049354-8049373 MS.gene074045:intron 45.0%
!! GTATGTGTGACTAGTCTGTG+TGG - chr6.1:8050481-8050500 MS.gene074045:intron 45.0%
AGGGTGAGAGATGTAAGTGG+TGG - chr6.1:8050400-8050419 MS.gene074045:intron 50.0%
AGTCGATGAGATGATCCGTG+AGG - chr6.1:8051126-8051145 MS.gene074045:intron 50.0%
ATCCGTGAGGCTGATGTTGA+TGG - chr6.1:8051139-8051158 MS.gene074045:CDS 50.0%
ATTGGGGCAAAACCCAACTG+AGG - chr6.1:8050880-8050899 MS.gene074045:intron 50.0%
CACCATCAACATCAGCCTCA+CGG + chr6.1:8051144-8051163 None:intergenic 50.0%
CAGACACACAGACACAACAC+TGG + chr6.1:8049021-8049040 None:intergenic 50.0%
CCTCATGGCAAGGAAGATGA+AGG - chr6.1:8050976-8050995 MS.gene074045:intron 50.0%
CCTTCATCTTCCTTGCCATG+AGG + chr6.1:8050979-8050998 None:intergenic 50.0%
CGTCATGTGATGACCAACCT+TGG - chr6.1:8051082-8051101 MS.gene074045:intron 50.0%
CTGTGTCAGTGCTTCATAGC+CGG - chr6.1:8049038-8049057 MS.gene074045:intron 50.0%
GCACCCATGTTAGTAAGTGC+TGG - chr6.1:8050313-8050332 MS.gene074045:intron 50.0%
TATCTGAACCATGCCCCTTG+AGG + chr6.1:8050538-8050557 None:intergenic 50.0%
TCTCATAACCTCAAGGGGCA+TGG - chr6.1:8050527-8050546 MS.gene074045:intron 50.0%
TGCAGGTTGCATCACAACCA+AGG - chr6.1:8050835-8050854 MS.gene074045:intron 50.0%
TGCATCACAACCAAGGAGCT+TGG - chr6.1:8050842-8050861 MS.gene074045:intron 50.0%
TGCTGGAGAGGAGTAACACT+TGG - chr6.1:8050330-8050349 MS.gene074045:intron 50.0%
! GAGAGATGTAAGTGGTGGAG+AGG - chr6.1:8050405-8050424 MS.gene074045:intron 50.0%
!! AGGAGCTGAAAGAGGCGTTT+CGG - chr6.1:8051014-8051033 MS.gene074045:intron 50.0%
!! GAGGCTGATGTTGATGGTGA+TGG - chr6.1:8051145-8051164 MS.gene074045:CDS 50.0%
!! GTTGGTGCTACAAAGGTGTC+CGG + chr6.1:8048916-8048935 None:intergenic 50.0%
!!! GGCGTTTCGGGTTTTTGACA+AGG - chr6.1:8051027-8051046 MS.gene074045:intron 50.0%
CCTGAAGCTCTGCCTCAGTT+GGG + chr6.1:8050895-8050914 None:intergenic 55.0%
TCCTGAAGCTCTGCCTCAGT+TGG + chr6.1:8050896-8050915 None:intergenic 55.0%
TTCATAGCCGGACACGCCTT+TGG - chr6.1:8049050-8049069 MS.gene074045:intron 55.0%
TTTCAGCTCCTCCTCGGAGT+CGG + chr6.1:8051005-8051024 None:intergenic 55.0%
! ATTCGGACCAAAGGCGTGTC+CGG + chr6.1:8049060-8049079 None:intergenic 55.0%
! GGATGCGTTACCCTTGCTGT+TGG - chr6.1:8050351-8050370 MS.gene074045:intron 55.0%
!! GGAGCTGAAAGAGGCGTTTC+GGG - chr6.1:8051015-8051034 MS.gene074045:intron 55.0%
CATCGGTGAGCTTCTCGCCA+AGG + chr6.1:8051102-8051121 None:intergenic 60.0%
CCCAACTGAGGCAGAGCTTC+AGG - chr6.1:8050892-8050911 MS.gene074045:intron 60.0%
CGCCTCTTTCAGCTCCTCCT+CGG + chr6.1:8051011-8051030 None:intergenic 60.0%
CTCCGAGGAGGAGCTGAAAG+AGG - chr6.1:8051006-8051025 MS.gene074045:intron 60.0%
GGTGAGCTTCTCGCCAAGGT+TGG + chr6.1:8051098-8051117 None:intergenic 60.0%
!! GATGAAGGACACCGACTCCG+AGG - chr6.1:8050991-8051010 MS.gene074045:intron 60.0%
!! GAAGGACACCGACTCCGAGG+AGG - chr6.1:8050994-8051013 MS.gene074045:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 8048071 8051213 8048071 ID=MS.gene074045
chr6.1 mRNA 8048071 8051213 8048071 ID=MS.gene074045.t1;Parent=MS.gene074045
chr6.1 exon 8051138 8051213 8051138 ID=MS.gene074045.t1.exon1;Parent=MS.gene074045.t1
chr6.1 CDS 8051138 8051213 8051138 ID=cds.MS.gene074045.t1;Parent=MS.gene074045.t1
chr6.1 exon 8048071 8048444 8048071 ID=MS.gene074045.t1.exon2;Parent=MS.gene074045.t1
chr6.1 CDS 8048071 8048444 8048071 ID=cds.MS.gene074045.t1;Parent=MS.gene074045.t1
Gene Sequence

>MS.gene074045

ATGGCAGATCAACTCACAGATGATCAGATCTCTGAGTTCAAGGAAGCTTTCAGCTTATTCGATAAGGATGGCGATGGTAACAATCTCTCTCTCGTTCTCCTTTTTTTTTTGTAGATTGTTTTTGTAATTTTTTTTTGTTGTGATTTATTTGTGATGCGATTTTGATTAGGAATTTTGTTAGTTTTTTTTTCTTTCAATTTTATGATTTTGTTTTGTTTGATTGATTTGTGATGTGATTTGGATTAGAAATTTTCCTAGGTTTTGGTTTTCCTTTGATTTTGTTAATTTGTTTTGAATTTCATGGAGCTTATTTTATTTATTTTATATATTTATGATTATTTTTTATATGATTATTCATATTATTGTCGTAATTTTGCTGATTTAGATGAACAACTGATTTCAAAAAATTGAATAAAAAAATCAATGTTTTTTAATTTAGAAAAAAAACATAGAAAGCTAAAGAAAATTGCGATTTGTTAGGAAAAATTTGTAGCTTATTCGTTCAAGTTATGATAGTTCTAACTTCTAAGGTTATATCTCAATTTTATTTTGATAGTTTATTACGATAGTGATAGGTAAATACTGGTAATAATTTAAGAAAATAGAAATGATTGAACTTTCGTGTAACTATATGTGTCGTTGTCGTGTTCATATGAGACACTCTCACTTGTCAGCCACTTTATGCATTCGATCCGAATCGTTGTACTGCATAGGTTGCAATACTCTTTTTTGTAGAATACTTACTACTTTATAATGACGGTGACATGTTAATACCGATAATAATTTAAGAGAATCGAAGTGATTGAATGTATATGTCAGTGTTGTGTTAGTATGGACACTCTCCGGACACCTTTGTAGCACCAACACTTGTAATCAAAGTCATGTTGTTGTCCAACATGACATCGACATGTGATTACATTCAAATAATTCATTTTTCCAAATTACTACCAGTGTTGTGTCTGTGTGTCTGTGTCAGTGCTTCATAGCCGGACACGCCTTTGGTCCGAATTGTTAGTGTTAAATAGGTTCGAATACTTTTTGTTTGTTTTGCTGCCCTTTTTGTAATTAATAACCAGCAAGGATAAAGATTATGATTCCAATGAGGAAGTAAGGGATAAGATAGAACTCTCACCTTGATATAATGGTTAAATGATATGTTATGCTACATGTGCAACTCTTTTTCAAAGTGTTATTGACATTTTTGTGGATATGATCCATAAATATTTTTCCTATGGTTTGTGAGCTTGTTTATGTGTCTGAAGTTTTGAGAAACATGACATGATGGCAGGTGTTGAAAGATACTAGGTTTTCATGATGTAGTTTATTATGTGTTGTCAATAACGGATCAAAGCAAATAATGGGTTGTTCAAATTCAACTACGCTATTGTGTTATAGCATTTTTTTTACAGCCCTTTGTACTAAATAGTGAATCATAGAACAATGATGATTTGCTCATATTCCACTATGAAGTAGCACCTCTATTCGACAACACTGAGTTTATTCATTGTAGAGTTTTTTCTTTGTATAGAGTCAAAGCTTGCTATCACTATCTTGTTATGTCATTTGAAGGGTTTTTTGTTTTTTCCATTGAAAAACATATACTTTGACCTCAATTTGATTGAATGAAAAAAGTTAAATACATGTTGGCTATATTTATGTGGCTTATATACTAGTAGGGTGAGAGAAGTAAGGGATATGATAAACTCTCATCTTGATTTAATGGTTACTTGATAGTTGATATGTTCTGCCACATCTGCAACCCTTTTTCAAAGTGTTATTGATTTTGTGAATATTATTCGTAGATATTTTGCCTATGGCTTGTGAGTTTGTTTATGTGTATGAGTTTTGAGAAACATGGCATGTGACATGTTTTGAAAGATATGGGTTTTCATGATATAGCTTATTCAGTATTGTCAATAGCGGGTTGTTTGAATTCCACTATGCTACAGACTACAGTGTGAATTTGCTTCTATATGACAACACTTTCTATTAAATAGGGAATCACAAAACAATAGTGATTAATTCAAATTCTACTATGATATAGGCATAGTGCTGCTATTTGACTCACTGATTTTATTGTAAAGTTTTTCTTTGTTCATTTAGAGTTCACAACTTTCTATTATTTTTGTGCTGTATTATTTGAATTTCTGTCTTTTGAAAAACAGAGACAAATGCAGACCTGTATTTGATTGAATGAAATAGTTGAATACACACTGACACTGGCTATATAACAATGCCAACAGCACCCATGTTAGTAAGTGCTGGAGAGGAGTAACACTTGGATGCGTTACCCTTGCTGTTGGCATTGTTATGTGGCTTATATACGAGAAGGGTGAGAGATGTAAGTGGTGGAGAGGAATTGAATCAAACTAACCATATTATCATGAATAAAAGTTTGACTACACATTGAGTATGTGTGACTAGTCTGTGTGGTGTCATATCAATCACTAGCTTGATCTCATAACCTCAAGGGGCATGGTTCAGATACTTGAAAAATGGTCGTTAGTTAGCGTCATTTTATTTCACGATGATTTCCCATTTTAGTTATGTCGCTAATACACTAGCAGGATGTGTAATTGTAACTAACCATAATCATCTTACTAGCCAGGATGTAAACCAACCATAATCATCTAACTAATTCTCATCTAACTAATTCTCATCTAACTAATTCTCATCTAACTAGGTAAGAAGTCATTTGCTTATAGGGTAATGAATTGATGATGCTATAAATTTGTTGTTGATTATTATATATATGGTGTGAACTTGCAGGTTGCATCACAACCAAGGAGCTTGGAACTGTTATGCGTTCATTGGGGCAAAACCCAACTGAGGCAGAGCTTCAGGACATGATCAATGAAGTAGATGCTGATGGGAATGGTACTATTGACTTCCCTGAGTTTCTTAACCTCATGGCAAGGAAGATGAAGGACACCGACTCCGAGGAGGAGCTGAAAGAGGCGTTTCGGGTTTTTGACAAGGATCAGAATGGTTTCATTTCTGCTGCTGAGCTTCGTCATGTGATGACCAACCTTGGCGAGAAGCTCACCGATGAAGAAGTCGATGAGATGATCCGTGAGGCTGATGTTGATGGTGATGGTCAAATAAACTATGAGGAATTCGTTAAGGTCATGATGGCTAAATGA

Protein sequence

>MS.gene074045.t1

MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK