AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012664

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012664.t1 MTR_4g132490 94.495 327 17 1 69 394 1 327 0.0 636
MS.gene012664.t1 MTR_2g029850 39.039 333 194 4 67 394 2 330 5.04e-75 237
MS.gene012664.t1 MTR_2g029820 39.688 320 182 5 81 394 16 330 1.55e-74 236
MS.gene012664.t1 MTR_1g066640 38.206 301 181 4 96 394 26 323 1.61e-72 229
MS.gene012664.t1 MTR_2g029860 39.339 333 185 5 74 394 3 330 1.08e-71 228
MS.gene012664.t1 MTR_2g029830 39.809 314 178 5 87 394 21 329 1.33e-71 228
MS.gene012664.t1 MTR_1g066380 37.542 301 183 4 96 394 26 323 2.97e-71 226
MS.gene012664.t1 MTR_2g029815 38.438 333 190 6 72 394 3 330 2.90e-70 225
MS.gene012664.t1 MTR_2g029750 39.640 333 186 6 72 394 3 330 4.24e-70 224
MS.gene012664.t1 MTR_5g021060 38.689 305 182 3 94 394 27 330 8.17e-70 223
MS.gene012664.t1 MTR_6g043460 40.000 320 174 9 75 390 19 324 5.06e-69 221
MS.gene012664.t1 MTR_6g043280 42.020 307 162 7 92 394 38 332 1.01e-68 220
MS.gene012664.t1 MTR_2g029910 38.095 336 196 6 66 394 2 332 1.56e-68 220
MS.gene012664.t1 MTR_6g043240 40.984 305 166 7 92 394 39 331 3.33e-68 219
MS.gene012664.t1 MTR_1g066710 36.545 301 186 4 96 394 26 323 6.37e-68 218
MS.gene012664.t1 MTR_3g094650 36.667 300 185 2 96 394 27 322 1.90e-67 216
MS.gene012664.t1 MTR_1g066680 38.206 301 180 5 96 394 26 322 4.91e-67 216
MS.gene012664.t1 MTR_2g029560 37.829 304 183 3 96 394 23 325 6.46e-67 216
MS.gene012664.t1 MTR_1g101830 36.585 328 193 8 74 394 3 322 7.35e-67 215
MS.gene012664.t1 MTR_2g029740 37.812 320 188 5 81 394 16 330 1.19e-66 216
MS.gene012664.t1 MTR_2g028980 40.717 307 170 8 96 394 28 330 1.93e-66 215
MS.gene012664.t1 MTR_5g022870 35.913 323 197 5 75 394 1 316 3.26e-66 213
MS.gene012664.t1 MTR_2g084110 37.667 300 180 3 96 394 24 317 6.11e-66 213
MS.gene012664.t1 MTR_4g132110 37.662 308 187 4 89 394 24 328 2.58e-65 211
MS.gene012664.t1 MTR_1g090760 35.241 332 199 7 71 394 7 330 3.39e-65 211
MS.gene012664.t1 MTR_5g083860 35.179 307 194 2 89 394 23 325 3.53e-65 211
MS.gene012664.t1 MTR_5g014100 37.255 306 184 4 97 394 26 331 4.36e-65 211
MS.gene012664.t1 MTR_2g029800 35.152 330 203 5 71 394 6 330 1.55e-64 210
MS.gene012664.t1 MTR_4g087965 38.614 303 179 4 96 391 41 343 1.56e-64 210
MS.gene012664.t1 MTR_7g086870 39.474 304 164 5 97 394 22 311 4.48e-64 207
MS.gene012664.t1 MTR_4g132110 38.019 313 184 6 89 394 24 333 5.07e-64 208
MS.gene012664.t1 MTR_8g075100 35.855 304 185 5 94 394 23 319 6.04e-64 207
MS.gene012664.t1 MTR_3g072190 34.906 318 202 2 77 394 6 318 9.10e-64 207
MS.gene012664.t1 MTR_4g030890 35.354 297 185 3 101 394 104 396 9.54e-64 210
MS.gene012664.t1 MTR_8g076820 36.624 314 192 4 87 394 18 330 9.84e-64 207
MS.gene012664.t1 MTR_2g084080 36.667 300 183 3 96 394 24 317 2.42e-63 206
MS.gene012664.t1 MTR_2g029730 37.829 304 183 3 96 394 24 326 6.54e-63 206
MS.gene012664.t1 MTR_3g466200 34.056 323 204 4 74 394 5 320 1.16e-62 204
MS.gene012664.t1 MTR_7g029030 35.220 318 199 4 81 394 6 320 1.18e-62 204
MS.gene012664.t1 MTR_7g072510 36.478 318 195 3 78 394 1 312 2.21e-62 203
MS.gene012664.t1 MTR_1g022970 38.782 312 178 6 89 394 43 347 2.34e-62 204
MS.gene012664.t1 MTR_4g031140 34.314 306 194 3 92 394 23 324 4.47e-62 203
MS.gene012664.t1 MTR_0286s0010 35.484 310 195 4 89 394 26 334 9.00e-62 202
MS.gene012664.t1 MTR_6g008075 35.484 310 195 4 89 394 26 334 9.00e-62 202
MS.gene012664.t1 MTR_2g084010 35.093 322 195 7 77 394 7 318 1.14e-61 201
MS.gene012664.t1 MTR_2g084000 35.880 301 185 4 96 394 25 319 1.22e-61 201
MS.gene012664.t1 MTR_2g084090 35.333 300 188 3 96 394 24 318 1.53e-61 201
MS.gene012664.t1 MTR_0155s0040 35.093 322 197 6 75 394 4 315 1.58e-61 201
MS.gene012664.t1 MTR_1g025980 34.385 317 199 5 78 391 5 315 3.50e-61 200
MS.gene012664.t1 MTR_8g062780 36.452 310 191 4 90 394 16 324 6.29e-61 200
MS.gene012664.t1 MTR_7g086820 34.194 310 193 6 86 394 13 312 1.03e-60 199
MS.gene012664.t1 MTR_2g084020 35.216 301 187 4 96 394 24 318 1.95e-60 198
MS.gene012664.t1 MTR_3g092990 33.951 324 211 1 74 394 3 326 3.70e-60 198
MS.gene012664.t1 MTR_6g027440 34.568 324 200 6 73 394 1 314 6.51e-60 197
MS.gene012664.t1 MTR_4g029200 36.120 299 186 2 96 394 45 338 1.76e-59 196
MS.gene012664.t1 MTR_4g125940 35.202 321 197 5 81 394 13 329 2.34e-59 196
MS.gene012664.t1 MTR_3g105790 35.030 334 197 7 69 394 1 322 2.81e-59 195
MS.gene012664.t1 MTR_7g026990 33.856 319 202 3 76 394 13 322 5.19e-59 195
MS.gene012664.t1 MTR_1g066380 38.672 256 152 4 141 394 3 255 9.03e-59 192
MS.gene012664.t1 MTR_1g077000 37.584 298 177 5 97 394 39 327 1.53e-58 194
MS.gene012664.t1 MTR_3g094670 34.426 305 195 2 91 394 22 322 1.55e-58 193
MS.gene012664.t1 MTR_2g029830 39.768 259 148 4 142 394 5 261 1.55e-58 192
MS.gene012664.t1 MTR_5g074970 34.347 329 203 5 70 394 7 326 3.46e-58 192
MS.gene012664.t1 MTR_5g074860 33.939 330 207 5 69 393 1 324 4.49e-58 192
MS.gene012664.t1 MTR_7g072480 34.462 325 203 4 71 394 1 316 7.87e-58 191
MS.gene012664.t1 MTR_1g054205 36.039 308 184 5 96 394 23 326 7.96e-58 192
MS.gene012664.t1 MTR_4g122640 32.938 337 212 4 71 394 1 336 1.51e-57 191
MS.gene012664.t1 MTR_5g017860 35.644 303 189 4 96 394 26 326 2.74e-57 190
MS.gene012664.t1 MTR_5g017850 34.653 303 192 4 96 394 26 326 2.85e-57 190
MS.gene012664.t1 MTR_5g049280 31.737 334 211 5 77 394 5 337 2.93e-57 191
MS.gene012664.t1 MTR_4g114210 36.474 329 190 7 75 394 2 320 3.59e-57 190
MS.gene012664.t1 MTR_2g099175 34.615 338 202 6 69 394 5 335 5.79e-57 190
MS.gene012664.t1 MTR_4g029170 34.333 300 190 4 97 394 27 321 8.75e-57 189
MS.gene012664.t1 MTR_7g107520 34.347 329 202 8 71 394 1 320 3.51e-56 187
MS.gene012664.t1 MTR_1g086320 33.333 327 211 5 75 394 7 333 4.78e-56 187
MS.gene012664.t1 MTR_3g094630 33.443 305 198 2 91 394 22 322 4.89e-56 187
MS.gene012664.t1 MTR_7g093370 35.082 305 191 4 96 394 68 371 9.35e-56 187
MS.gene012664.t1 MTR_1g009750 35.599 309 183 7 96 394 26 328 1.19e-55 186
MS.gene012664.t1 MTR_4g083710 33.113 302 196 3 96 394 26 324 1.99e-55 185
MS.gene012664.t1 MTR_4g046713 33.645 321 201 5 81 394 11 326 2.13e-55 185
MS.gene012664.t1 MTR_2g008710 35.780 327 194 6 78 394 5 325 2.16e-55 185
MS.gene012664.t1 MTR_3g466180 34.328 335 199 5 67 394 3 323 2.56e-55 185
MS.gene012664.t1 MTR_4g029190 36.486 296 181 3 101 394 50 340 4.80e-55 185
MS.gene012664.t1 MTR_5g016010 33.030 330 207 7 68 390 3 325 2.64e-54 182
MS.gene012664.t1 MTR_2g437770 35.855 304 181 6 95 394 48 341 3.76e-54 182
MS.gene012664.t1 MTR_2g078610 35.977 353 183 12 82 393 55 405 1.50e-53 183
MS.gene012664.t1 MTR_4g029180 33.333 297 191 4 100 394 30 321 2.11e-53 180
MS.gene012664.t1 MTR_4g127670 35.179 307 185 6 96 394 23 323 2.90e-53 180
MS.gene012664.t1 MTR_2g088770 35.065 308 184 9 96 394 25 325 1.49e-52 178
MS.gene012664.t1 MTR_1g086490 33.234 334 209 6 75 394 7 340 1.79e-52 178
MS.gene012664.t1 MTR_2g077990 35.674 356 180 11 82 393 55 405 1.87e-52 180
MS.gene012664.t1 MTR_2g040000 35.065 308 187 7 96 394 28 331 2.21e-52 177
MS.gene012664.t1 MTR_4g133800 33.223 301 188 5 98 394 42 333 4.05e-52 177
MS.gene012664.t1 MTR_2g067440 34.783 345 184 9 86 393 46 386 2.06e-51 177
MS.gene012664.t1 MTR_1g115900 33.993 303 189 5 96 394 26 321 2.75e-51 175
MS.gene012664.t1 MTR_3g092990 32.407 324 205 2 74 394 3 315 3.45e-51 174
MS.gene012664.t1 MTR_5g033470 34.405 311 197 6 91 394 67 377 5.98e-51 175
MS.gene012664.t1 MTR_4g095450 34.185 313 176 6 96 393 26 323 8.16e-51 173
MS.gene012664.t1 MTR_1g038680 34.983 303 185 6 101 394 33 332 4.77e-50 172
MS.gene012664.t1 MTR_3g072190 35.039 254 160 2 141 394 3 251 5.70e-50 169
MS.gene012664.t1 MTR_4g074990 32.817 323 193 5 78 394 1 305 1.13e-49 170
MS.gene012664.t1 MTR_4g125940 35.379 277 169 4 125 394 1 274 2.77e-49 168
MS.gene012664.t1 MTR_2g078280 35.294 340 177 11 82 380 55 392 1.31e-48 169
MS.gene012664.t1 MTR_4g074995 31.126 302 189 4 96 394 23 308 1.43e-48 167
MS.gene012664.t1 MTR_5g074760 32.566 304 194 6 96 394 24 321 4.58e-48 166
MS.gene012664.t1 MTR_5g074740 32.566 304 194 6 96 394 24 321 1.17e-47 165
MS.gene012664.t1 MTR_4g074980 35.938 256 149 3 73 326 11 253 1.21e-47 163
MS.gene012664.t1 MTR_3g467600 31.661 319 208 5 81 394 11 324 1.85e-47 164
MS.gene012664.t1 MTR_1g009750 33.225 307 176 8 96 394 26 311 1.09e-45 159
MS.gene012664.t1 MTR_5g074710 30.263 304 201 5 96 394 24 321 5.26e-45 158
MS.gene012664.t1 MTR_4g074980 31.193 327 177 5 73 394 11 294 2.38e-44 155
MS.gene012664.t1 MTR_3g105790 35.918 245 145 4 158 394 6 246 2.50e-43 151
MS.gene012664.t1 MTR_2g067450 33.333 309 190 6 94 393 8 309 8.31e-42 149
MS.gene012664.t1 MTR_2g008160 30.968 310 196 6 95 394 22 323 6.86e-40 144
MS.gene012664.t1 MTR_5g074860 29.697 330 182 5 69 393 1 285 1.62e-39 142
MS.gene012664.t1 MTR_2g008730 36.017 236 142 4 166 394 68 301 1.67e-37 137
MS.gene012664.t1 MTR_0147s0010 30.841 321 182 6 97 393 77 381 2.90e-37 139
MS.gene012664.t1 MTR_2g029880 35.602 191 107 4 209 394 9 188 1.66e-31 119
MS.gene012664.t1 MTR_2g008160 35.795 176 109 2 95 270 22 193 4.14e-31 118
MS.gene012664.t1 MTR_2g008160 28.247 308 172 6 95 394 22 288 2.73e-30 118
MS.gene012664.t1 MTR_5g074700 31.111 225 134 6 173 394 8 214 1.36e-28 111
MS.gene012664.t1 MTR_3g072260 41.406 128 75 0 77 204 6 133 3.60e-25 100
MS.gene012664.t1 MTR_3g072210 31.053 190 122 5 208 394 55 238 1.47e-24 101
MS.gene012664.t1 MTR_5g058120 32.716 162 98 3 230 390 4 155 4.25e-19 86.7
MS.gene012664.t1 MTR_7g072490 27.642 246 117 3 143 387 2 187 4.97e-19 85.1
MS.gene012664.t1 MTR_7g086790 40.000 120 68 2 144 263 17 132 1.29e-18 83.6
MS.gene012664.t1 MTR_1g098320 44.872 78 43 0 317 394 47 124 7.90e-16 74.3
MS.gene012664.t1 MTR_6g048160 52.113 71 30 1 136 206 22 88 4.00e-15 70.9
MS.gene012664.t1 MTR_4g114220 42.553 94 44 2 114 207 20 103 1.57e-12 65.1
MS.gene012664.t1 MTR_1g089005 29.371 143 88 3 75 212 1 135 1.93e-12 65.1
MS.gene012664.t1 MTR_4g012865 46.429 56 30 0 97 152 77 132 5.19e-11 60.8
MS.gene012664.t1 MTR_4g031040 27.049 122 74 2 207 328 25 131 8.65e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012664.t1 AT3G17070 52.980 302 138 2 97 394 38 339 5.60e-109 323
MS.gene012664.t1 AT3G17070 52.344 256 118 2 143 394 21 276 4.51e-86 263
MS.gene012664.t1 AT3G03670 40.000 320 179 5 82 394 8 321 1.56e-72 229
MS.gene012664.t1 AT1G71695 41.042 307 169 7 92 394 41 339 2.51e-72 230
MS.gene012664.t1 AT2G37130 37.987 308 185 5 90 394 23 327 1.69e-71 227
MS.gene012664.t1 AT2G37130 38.591 298 177 5 100 394 2 296 2.40e-70 223
MS.gene012664.t1 AT5G66390 37.725 334 199 5 69 394 1 333 8.25e-70 223
MS.gene012664.t1 AT4G16270 40.256 313 175 6 89 394 41 348 5.47e-69 221
MS.gene012664.t1 AT4G21960 35.143 350 200 6 48 394 2 327 5.68e-69 221
MS.gene012664.t1 AT5G17820 38.095 315 181 4 83 394 10 313 2.80e-68 218
MS.gene012664.t1 AT2G22420 35.312 320 202 3 77 394 3 319 6.05e-68 218
MS.gene012664.t1 AT3G50990 35.821 335 202 5 72 394 8 341 1.49e-67 218
MS.gene012664.t1 AT5G17820 38.095 315 181 4 83 394 63 366 2.01e-67 218
MS.gene012664.t1 AT2G18140 36.170 329 203 4 71 394 9 335 1.28e-66 215
MS.gene012664.t1 AT4G36430 35.738 305 191 3 94 394 27 330 1.59e-65 212
MS.gene012664.t1 AT5G05340 35.667 300 188 2 96 394 29 324 3.03e-64 208
MS.gene012664.t1 AT2G18150 35.922 309 190 5 91 394 31 336 1.33e-63 207
MS.gene012664.t1 AT2G35380 36.765 340 196 6 69 394 1 335 1.95e-63 207
MS.gene012664.t1 AT2G24800 37.049 305 181 4 96 394 30 329 2.16e-63 206
MS.gene012664.t1 AT1G24110 37.908 306 179 5 96 394 21 322 3.24e-63 206
MS.gene012664.t1 AT4G31760 36.513 304 183 3 96 394 28 326 1.29e-62 204
MS.gene012664.t1 AT5G51890 36.420 324 192 6 69 387 1 315 5.55e-62 202
MS.gene012664.t1 AT5G06730 35.691 311 192 4 90 394 26 334 1.19e-61 202
MS.gene012664.t1 AT1G44970 37.748 302 176 5 101 394 49 346 1.22e-61 202
MS.gene012664.t1 AT1G68850 34.421 337 207 7 69 394 2 335 3.79e-61 201
MS.gene012664.t1 AT1G05260 37.386 329 184 11 81 394 4 325 7.75e-61 199
MS.gene012664.t1 AT5G06720 33.841 328 203 5 75 394 12 333 3.06e-59 196
MS.gene012664.t1 AT5G58400 36.213 301 186 3 96 394 29 325 3.56e-59 195
MS.gene012664.t1 AT4G26010 37.000 300 177 6 96 394 21 309 1.44e-58 193
MS.gene012664.t1 AT5G14130 34.824 313 194 4 88 394 22 330 1.76e-58 194
MS.gene012664.t1 AT2G34060 36.066 305 186 7 95 391 40 343 1.89e-58 194
MS.gene012664.t1 AT4G26010 37.000 300 177 6 96 394 49 337 2.24e-58 194
MS.gene012664.t1 AT5G15180 33.837 331 209 5 68 394 5 329 2.95e-58 193
MS.gene012664.t1 AT5G14130 34.824 313 194 4 88 394 63 371 3.29e-58 194
MS.gene012664.t1 AT5G19890 38.154 325 185 8 77 394 12 327 4.44e-58 192
MS.gene012664.t1 AT1G14540 36.093 302 184 6 96 394 20 315 4.96e-58 192
MS.gene012664.t1 AT5G40150 35.430 302 190 3 95 394 30 328 6.19e-58 192
MS.gene012664.t1 AT4G33420 33.962 318 201 4 77 394 17 325 1.57e-57 191
MS.gene012664.t1 AT4G08770 36.156 307 186 5 96 394 23 327 2.05e-57 191
MS.gene012664.t1 AT1G49570 35.333 300 189 2 96 390 47 346 3.01e-57 191
MS.gene012664.t1 AT5G19880 34.639 332 200 6 72 394 6 329 3.97e-57 190
MS.gene012664.t1 AT5G42180 35.312 320 196 7 77 393 5 316 3.98e-57 189
MS.gene012664.t1 AT4G33420 33.962 318 201 4 77 394 64 372 6.06e-57 191
MS.gene012664.t1 AT2G41480 36.111 324 189 7 81 394 13 328 6.31e-57 189
MS.gene012664.t1 AT4G08780 36.482 307 185 5 96 394 23 327 1.14e-56 189
MS.gene012664.t1 AT1G34510 36.667 300 178 6 96 394 21 309 1.20e-56 188
MS.gene012664.t1 AT4G37530 33.654 312 186 7 96 394 26 329 2.62e-56 188
MS.gene012664.t1 AT1G30870 36.275 306 180 6 95 394 49 345 4.70e-56 188
MS.gene012664.t1 AT4G37520 33.441 311 188 7 96 394 26 329 2.55e-55 185
MS.gene012664.t1 AT2G38390 35.275 309 185 6 96 394 30 333 3.21e-55 186
MS.gene012664.t1 AT2G18980 33.230 322 205 5 78 394 7 323 3.32e-55 185
MS.gene012664.t1 AT1G14550 33.333 327 208 5 70 394 3 321 5.13e-55 184
MS.gene012664.t1 AT3G28200 36.482 307 179 7 95 394 19 316 5.65e-55 184
MS.gene012664.t1 AT3G01190 34.024 338 202 7 61 394 1 321 8.01e-55 184
MS.gene012664.t1 AT3G32980 35.048 311 192 5 92 394 26 334 1.28e-54 184
MS.gene012664.t1 AT1G05240 34.000 300 188 4 97 390 26 321 1.96e-54 183
MS.gene012664.t1 AT1G05250 34.000 300 188 4 97 390 26 321 1.96e-54 183
MS.gene012664.t1 AT2G38380 35.505 307 187 5 96 394 30 333 2.31e-54 183
MS.gene012664.t1 AT4G11290 35.714 308 184 8 96 394 24 326 2.31e-54 183
MS.gene012664.t1 AT4G30170 33.882 304 192 5 96 394 26 325 2.97e-54 182
MS.gene012664.t1 AT3G49120 34.146 328 201 6 75 394 15 335 4.04e-54 183
MS.gene012664.t1 AT4G33870 30.548 347 203 4 83 392 54 399 3.93e-53 182
MS.gene012664.t1 AT5G58390 32.188 320 211 3 77 394 1 316 4.91e-53 179
MS.gene012664.t1 AT4G17690 33.115 305 191 3 96 394 25 322 8.19e-53 179
MS.gene012664.t1 AT4G37520 32.797 311 187 8 96 394 26 326 9.40e-53 179
MS.gene012664.t1 AT5G47000 32.407 324 211 5 74 394 12 330 1.08e-52 179
MS.gene012664.t1 AT3G49110 35.505 307 188 5 96 394 32 336 1.41e-52 179
MS.gene012664.t1 AT5G67400 33.119 311 189 6 96 394 26 329 1.94e-52 178
MS.gene012664.t1 AT2G43480 33.016 315 192 6 91 394 29 335 3.02e-52 177
MS.gene012664.t1 AT3G21770 33.887 301 189 7 96 390 28 324 1.19e-51 176
MS.gene012664.t1 AT5G22410 34.650 329 200 9 69 390 1 321 1.58e-51 176
MS.gene012664.t1 AT5G24070 33.548 310 187 6 96 394 34 335 1.28e-50 173
MS.gene012664.t1 AT5G64120 33.779 299 184 5 101 394 39 328 9.35e-50 171
MS.gene012664.t1 AT3G49960 31.310 313 192 7 96 394 26 329 3.10e-49 169
MS.gene012664.t1 AT2G39040 34.202 307 193 6 96 394 45 350 3.94e-49 170
MS.gene012664.t1 AT4G37530 34.340 265 153 7 96 347 26 282 1.15e-47 164
MS.gene012664.t1 AT4G25980 32.268 313 199 6 90 394 19 326 9.11e-47 163
MS.gene012664.t1 AT5G39580 32.615 325 210 5 73 394 1 319 4.53e-46 161
MS.gene012664.t1 AT1G77100 30.938 320 207 7 81 394 8 319 6.47e-44 155
MS.gene012664.t1 AT5G64110 33.887 301 184 6 101 394 38 330 6.97e-42 150
MS.gene012664.t1 AT5G64100 33.841 328 198 9 75 394 15 331 1.08e-41 149
MS.gene012664.t1 AT2G35380 35.833 240 136 5 168 394 13 247 2.54e-41 146
MS.gene012664.t1 AT2G24800 39.521 167 97 1 96 262 30 192 1.24e-34 128
MS.gene012664.t1 AT4G25980 37.714 175 105 2 90 264 64 234 2.86e-33 126
MS.gene012664.t1 AT5G39580 33.906 233 141 4 81 313 9 228 1.06e-32 123
MS.gene012664.t1 AT3G42570 50.459 109 53 1 157 264 41 149 1.55e-27 106
MS.gene012664.t1 AT4G32320 28.195 266 127 9 129 382 115 328 5.38e-17 81.6
MS.gene012664.t1 AT3G09640 28.063 253 125 11 132 374 38 243 1.27e-16 79.3
MS.gene012664.t1 AT3G09640 28.063 253 125 11 132 374 38 243 1.27e-16 79.3

Find 82 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACTTTGCAATCAGAAAT+AGG 0.221902 8.1:-1661195 MS.gene012664:CDS
ATGGTTTACGTCGTCAATTC+CGG 0.225900 8.1:-1662097 MS.gene012664:CDS
TTGATATGCATTACCTAAAA+TGG 0.243577 8.1:+1660913 None:intergenic
TCTTGCAACTGTGGTTATTA+TGG 0.251545 8.1:-1661602 MS.gene012664:CDS
CATTCCTTTAGATTTGAAAA+TGG 0.281912 8.1:+1660955 None:intergenic
TCGACCAAACTTTCTAAGTT+TGG 0.284525 8.1:+1661514 None:intergenic
AAGAGGAGACAATATGGATT+TGG 0.285987 8.1:-1660434 MS.gene012664:CDS
AATGATTGTCAAATATTGTT+GGG 0.327422 8.1:+1660332 None:intergenic
TGGTTTACGTCGTCAATTCC+GGG 0.328098 8.1:-1662096 MS.gene012664:CDS
CTCTGGAGGACCAAGTATTC+AGG 0.331398 8.1:-1661071 MS.gene012664:CDS
GTTTCATGATTGCCAAGTTC+AGG 0.342204 8.1:-1661428 MS.gene012664:intron
ATTGTTGGGGTTATGTCATT+AGG 0.343505 8.1:+1660346 None:intergenic
GAGAGAAACGGCGGAGGTTA+TGG 0.344308 8.1:-1662116 MS.gene012664:CDS
GTGTCCAAACTTAGAAAGTT+TGG 0.351235 8.1:-1661518 MS.gene012664:CDS
GTGCACCATCAGCATTTCTA+AGG 0.353910 8.1:-1661456 MS.gene012664:CDS
TGTCATTAGGCACAAATGTT+AGG 0.354137 8.1:+1660359 None:intergenic
AGAGGAGACAATATGGATTT+GGG 0.363098 8.1:-1660433 MS.gene012664:CDS
TTGACAGGTGCACATACATT+AGG 0.373593 8.1:-1660505 MS.gene012664:intron
ACAGATAAGAGGAGACAATA+TGG 0.375221 8.1:-1660440 MS.gene012664:CDS
TGCACAGAAAAGAAAAGAAA+TGG 0.388037 8.1:-1661647 MS.gene012664:intron
AAACTTTGCAATCAGAAATA+GGG 0.397272 8.1:-1661194 MS.gene012664:CDS
ACAAATGTTAGGTTTGTCAT+AGG 0.409222 8.1:+1660370 None:intergenic
CCAAGTGGAACCTGAATACT+TGG 0.416167 8.1:+1661061 None:intergenic
AGCTCTGAAATAGCTTCTTC+AGG 0.418279 8.1:-1661217 MS.gene012664:CDS
TGTAGTAGTTGTAAGAAAGT+TGG 0.422109 8.1:+1661548 None:intergenic
AAGAACTTCTAGTTCTAAAG+AGG 0.443288 8.1:-1661026 MS.gene012664:CDS
AAGGTATCAGTGTCACTCTC+TGG 0.451748 8.1:-1661088 MS.gene012664:CDS
CTATAGTAATTACCTGAACT+TGG 0.453888 8.1:+1661416 None:intergenic
TAATGATTGTCAAATATTGT+TGG 0.457312 8.1:+1660331 None:intergenic
GGGTAGAGGAATGGTGGTGG+TGG 0.459180 8.1:-1662074 MS.gene012664:CDS
TCACTGCCGCCGGCATATAG+AGG 0.467427 8.1:+1662044 None:intergenic
ATGATGGGAAGAGGTCTGTT+TGG 0.467462 8.1:-1660295 MS.gene012664:CDS
GGACACTGCATAAGCATTGT+TGG 0.470288 8.1:-1660478 MS.gene012664:CDS
ATGGCAATGGGTGCAGTTCG+TGG 0.473467 8.1:+1660247 None:intergenic
TTGTATAATCAACAGATAAG+AGG 0.483057 8.1:-1660451 MS.gene012664:CDS
TCTGATTCTTCTTGCAACTG+TGG 0.497349 8.1:-1661611 MS.gene012664:CDS
TCTGCACAAGATACTTGTCC+TGG 0.497452 8.1:+1661130 None:intergenic
CATTGCCATGAGGTTTGCTA+TGG 0.500754 8.1:-1660233 MS.gene012664:CDS
CCAAGTATTCAGGTTCCACT+TGG 0.502152 8.1:-1661061 MS.gene012664:CDS
TAGACATAGAGATCGGAGAT+TGG 0.509705 8.1:-1662204 MS.gene012664:CDS
CATAGCAAACCTCATGGCAA+TGG 0.528737 8.1:+1660234 None:intergenic
ATAGCAAACCTCATGGCAAT+GGG 0.529814 8.1:+1660235 None:intergenic
TTGTCATAGGAATAACAGTT+GGG 0.530163 8.1:+1660383 None:intergenic
ACAGTGCAGTGAAGAGGTGG+AGG 0.537125 8.1:-1662152 MS.gene012664:CDS
ATGATTGTCAAATATTGTTG+GGG 0.539372 8.1:+1660333 None:intergenic
AGGACAGTGCAGTGAAGAGG+TGG 0.547741 8.1:-1662155 MS.gene012664:CDS
CTTAACAAATGCAGATGAGA+AGG 0.548411 8.1:+1660189 None:intergenic
CACCACCATTCCTCTACCCC+CGG 0.549038 8.1:+1662078 None:intergenic
GAGGAATGGTGGTGGTGGTG+CGG 0.551522 8.1:-1662069 MS.gene012664:CDS
ATATTAGAAGAAGAATGTCC+AGG 0.558167 8.1:-1661148 MS.gene012664:CDS
CGAAGTCGACGGAGATGAGG+AGG 0.559700 8.1:-1662179 MS.gene012664:CDS
GTGCGAAGTCGACGGAGATG+AGG 0.563011 8.1:-1662182 MS.gene012664:CDS
AGAGACATTATGATGGGAAG+AGG 0.566295 8.1:-1660304 MS.gene012664:CDS
TTATTACAGAGACATTATGA+TGG 0.566444 8.1:-1660311 MS.gene012664:CDS
TGGGCATGCTAGTCTTAGTG+AGG 0.572002 8.1:+1660402 None:intergenic
ATATGCAAGGTGAAGTCAGA+AGG 0.575185 8.1:-1660141 MS.gene012664:CDS
TTTGTCATAGGAATAACAGT+TGG 0.577245 8.1:+1660382 None:intergenic
TATTACAGAGACATTATGAT+GGG 0.582479 8.1:-1660310 MS.gene012664:CDS
ACAGTTGCAAGAAGAATCAG+AGG 0.585612 8.1:+1661613 None:intergenic
GGAGATTGGTGCGAAGTCGA+CGG 0.588121 8.1:-1662190 MS.gene012664:CDS
TCAACTGTTACTGTCGGTGA+AGG 0.593803 8.1:+1660989 None:intergenic
GGGAGGACAGTGCAGTGAAG+AGG 0.596246 8.1:-1662158 MS.gene012664:CDS
GGTTTACGTCGTCAATTCCG+GGG 0.606657 8.1:-1662095 MS.gene012664:CDS
AATGTTCTCACAAATATGCA+AGG 0.613013 8.1:-1660154 MS.gene012664:CDS
GGTGCGGTGCCTCTATATGC+CGG 0.614215 8.1:-1662053 MS.gene012664:CDS
TAAGAAGAGAGAAACGGCGG+AGG 0.617678 8.1:-1662122 MS.gene012664:CDS
AATTCGTCAACTGTTACTGT+CGG 0.617947 8.1:+1660983 None:intergenic
GAAATGATTCTCACTGCCGC+CGG 0.618209 8.1:+1662034 None:intergenic
ATCGTTTAAGAAGAGAGAAA+CGG 0.619932 8.1:-1662128 MS.gene012664:CDS
GGTGCACATACATTAGGCGT+TGG 0.625109 8.1:-1660499 MS.gene012664:CDS
CTGATCCATAGCAAACCTCA+TGG 0.639482 8.1:+1660228 None:intergenic
GACGAGGTAGACATAGAGAT+CGG 0.643316 8.1:-1662211 MS.gene012664:CDS
GTTTACGTCGTCAATTCCGG+GGG 0.664183 8.1:-1662094 MS.gene012664:CDS
GTATCAGTGTCACTCTCTGG+AGG 0.669514 8.1:-1661085 MS.gene012664:CDS
GAAGTCGACGGAGATGAGGA+GGG 0.689755 8.1:-1662178 MS.gene012664:CDS
GTCGACGGAGATGAGGAGGG+AGG 0.695743 8.1:-1662175 MS.gene012664:CDS
GATTGTGTCCAACAAAATCG+AGG 0.697177 8.1:+1661252 None:intergenic
ATGAGCCTTAGAAATGCTGA+TGG 0.697496 8.1:+1661451 None:intergenic
GCGGTGCCTCTATATGCCGG+CGG 0.700611 8.1:-1662050 MS.gene012664:CDS
GAACTGCACCCATTGCCATG+AGG 0.721829 8.1:-1660243 MS.gene012664:CDS
GCGGCGGAGGATGTTCGACG+AGG 0.738169 8.1:-1662227 None:intergenic
GTTTAAGAAGAGAGAAACGG+CGG 0.755359 8.1:-1662125 MS.gene012664:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTTAAAAGAATTAAAATC+TGG - chr8.1:1660341-1660360 MS.gene012664:CDS 15.0%
!! AATGATTGTCAAATATTGTT+GGG + chr8.1:1662008-1662027 None:intergenic 20.0%
!! ATAAAATGTCAAATGCTATT+AGG + chr8.1:1661719-1661738 None:intergenic 20.0%
!! ATGAGTTCAACTATAATTTA+TGG + chr8.1:1661450-1661469 None:intergenic 20.0%
!! TAATGATTGTCAAATATTGT+TGG + chr8.1:1662009-1662028 None:intergenic 20.0%
!! TTAGACAAATATTACAATGT+AGG - chr8.1:1660983-1661002 MS.gene012664:CDS 20.0%
!!! TTATCCATTTTCAAATCTAA+AGG - chr8.1:1661378-1661397 MS.gene012664:intron 20.0%
! AAACTTTGCAATCAGAAATA+GGG - chr8.1:1661143-1661162 MS.gene012664:CDS 25.0%
! ATGATTGTCAAATATTGTTG+GGG + chr8.1:1662007-1662026 None:intergenic 25.0%
! ATTAAGAAAGAATAAAGAGC+AGG - chr8.1:1660374-1660393 MS.gene012664:CDS 25.0%
! CATTCCTTTAGATTTGAAAA+TGG + chr8.1:1661385-1661404 None:intergenic 25.0%
! TATTACAGAGACATTATGAT+GGG - chr8.1:1662027-1662046 MS.gene012664:intron 25.0%
! TTATTACAGAGACATTATGA+TGG - chr8.1:1662026-1662045 MS.gene012664:intron 25.0%
! TTGATATGCATTACCTAAAA+TGG + chr8.1:1661427-1661446 None:intergenic 25.0%
! TTGTATAATCAACAGATAAG+AGG - chr8.1:1661886-1661905 MS.gene012664:intron 25.0%
!!! CTGTTACTATTAATTTTGAC+AGG - chr8.1:1661817-1661836 MS.gene012664:intron 25.0%
AATGTTCTCACAAATATGCA+AGG - chr8.1:1662183-1662202 MS.gene012664:CDS 30.0%
ACAAATGTTAGGTTTGTCAT+AGG + chr8.1:1661970-1661989 None:intergenic 30.0%
ACCCATAATTCTTGGTAAAA+AGG + chr8.1:1661541-1661560 None:intergenic 30.0%
AGTGTTAGTATGTGGAATAA+TGG + chr8.1:1660656-1660675 None:intergenic 30.0%
ATAATTCTTGGTAAAAAGGG+AGG + chr8.1:1661537-1661556 None:intergenic 30.0%
ATATTAGAAGAAGAATGTCC+AGG - chr8.1:1661189-1661208 MS.gene012664:CDS 30.0%
ATCGTTTAAGAAGAGAGAAA+CGG - chr8.1:1660209-1660228 MS.gene012664:CDS 30.0%
ATGTGTTAAGTGTTAGTATG+TGG + chr8.1:1660664-1660683 None:intergenic 30.0%
CAAAAACCATTGCTTATCTT+AGG + chr8.1:1661795-1661814 None:intergenic 30.0%
CCCATAATTCTTGGTAAAAA+GGG + chr8.1:1661540-1661559 None:intergenic 30.0%
CTAATCCATAATCCATTTCA+GGG - chr8.1:1661640-1661659 MS.gene012664:CDS 30.0%
CTATAGTAATTACCTGAACT+TGG + chr8.1:1660924-1660943 None:intergenic 30.0%
GAAACTTTGCAATCAGAAAT+AGG - chr8.1:1661142-1661161 MS.gene012664:CDS 30.0%
GTTGAATTAATTTCCATGCA+GGG - chr8.1:1661054-1661073 MS.gene012664:CDS 30.0%
TCAACAAAACAAACAAAGTG+AGG + chr8.1:1661039-1661058 None:intergenic 30.0%
TCTAATCCATAATCCATTTC+AGG - chr8.1:1661639-1661658 MS.gene012664:CDS 30.0%
TGCACAGAAAAGAAAAGAAA+TGG - chr8.1:1660690-1660709 MS.gene012664:intron 30.0%
TGTAGTAGTTGTAAGAAAGT+TGG + chr8.1:1660792-1660811 None:intergenic 30.0%
TGTTGAATTAATTTCCATGC+AGG - chr8.1:1661053-1661072 MS.gene012664:CDS 30.0%
TTGTCATAGGAATAACAGTT+GGG + chr8.1:1661957-1661976 None:intergenic 30.0%
TTGTTACCTAAGATAAGCAA+TGG - chr8.1:1661786-1661805 MS.gene012664:intron 30.0%
TTTAGATGCATGTGATTGAT+CGG - chr8.1:1660409-1660428 MS.gene012664:CDS 30.0%
TTTGTCATAGGAATAACAGT+TGG + chr8.1:1661958-1661977 None:intergenic 30.0%
! CAAATATCTGCTCTTTTTGT+TGG - chr8.1:1661579-1661598 MS.gene012664:CDS 30.0%
! CCCTTTTTACCAAGAATTAT+GGG - chr8.1:1661537-1661556 MS.gene012664:CDS 30.0%
! CCTTTTACACCAAATGAAAA+TGG + chr8.1:1660766-1660785 None:intergenic 30.0%
! TCCCTTTTTACCAAGAATTA+TGG - chr8.1:1661536-1661555 MS.gene012664:CDS 30.0%
! TGAGAATCATTTCTGGAAAA+GGG - chr8.1:1660313-1660332 MS.gene012664:CDS 30.0%
!! AAGAACTTCTAGTTCTAAAG+AGG - chr8.1:1661311-1661330 MS.gene012664:intron 30.0%
!! GTAGTATAATTGAGTTGAGT+TGG + chr8.1:1660570-1660589 None:intergenic 30.0%
!! GTTTGCTGATTTGAATGATA+CGG + chr8.1:1660601-1660620 None:intergenic 30.0%
!!! CCATTTTCATTTGGTGTAAA+AGG - chr8.1:1660763-1660782 MS.gene012664:intron 30.0%
!!! GGTGTTTTTTATGTCGTTTA+AGG - chr8.1:1661004-1661023 MS.gene012664:CDS 30.0%
!!! TATCATTGTTTTAGCTGCTA+AGG - chr8.1:1661230-1661249 MS.gene012664:CDS 30.0%
AAGAGGAGACAATATGGATT+TGG - chr8.1:1661903-1661922 MS.gene012664:intron 35.0%
AAGTTTGTGAGTCAAGCAAT+CGG + chr8.1:1660956-1660975 None:intergenic 35.0%
AATTCGTCAACTGTTACTGT+CGG + chr8.1:1661357-1661376 None:intergenic 35.0%
ACAGATAAGAGGAGACAATA+TGG - chr8.1:1661897-1661916 MS.gene012664:intron 35.0%
AGAGGAGACAATATGGATTT+GGG - chr8.1:1661904-1661923 MS.gene012664:intron 35.0%
AGGTGTGTTCTGTAAATAGA+AGG - chr8.1:1660501-1660520 MS.gene012664:CDS 35.0%
ATAGACATACCCTTGTCAAT+TGG + chr8.1:1660529-1660548 None:intergenic 35.0%
ATAGTTGAACTCATTTCGTC+AGG - chr8.1:1661456-1661475 MS.gene012664:CDS 35.0%
ATTGTTGGGGTTATGTCATT+AGG + chr8.1:1661994-1662013 None:intergenic 35.0%
CTTAACAAATGCAGATGAGA+AGG + chr8.1:1662151-1662170 None:intergenic 35.0%
GTGTCCAAACTTAGAAAGTT+TGG - chr8.1:1660819-1660838 MS.gene012664:intron 35.0%
GTGTTCATGAGTTGTATATC+TGG + chr8.1:1661682-1661701 None:intergenic 35.0%
TAGACATACCCTTGTCAATT+GGG + chr8.1:1660528-1660547 None:intergenic 35.0%
TAGTTGAACTCATTTCGTCA+GGG - chr8.1:1661457-1661476 MS.gene012664:CDS 35.0%
TCGACCAAACTTTCTAAGTT+TGG + chr8.1:1660826-1660845 None:intergenic 35.0%
TCTTGCAACTGTGGTTATTA+TGG - chr8.1:1660735-1660754 MS.gene012664:intron 35.0%
TGTCATTAGGCACAAATGTT+AGG + chr8.1:1661981-1662000 None:intergenic 35.0%
! AAAAAGGGAGGAAAAAGTGT+TGG + chr8.1:1661525-1661544 None:intergenic 35.0%
! ATATCTGCTCTTTTTGTTGG+TGG - chr8.1:1661582-1661601 MS.gene012664:CDS 35.0%
! CTTGAATCTTTTCTTCCAAG+TGG + chr8.1:1661294-1661313 None:intergenic 35.0%
! GTGAGAATCATTTCTGGAAA+AGG - chr8.1:1660312-1660331 MS.gene012664:CDS 35.0%
! TCTTTTCTTTTCTGTGCAGA+AGG + chr8.1:1660688-1660707 None:intergenic 35.0%
! TTACAGAACACACCTTTTGA+TGG + chr8.1:1660496-1660515 None:intergenic 35.0%
! TTATGTCGTTTAAGGTTGCT+TGG - chr8.1:1661012-1661031 MS.gene012664:CDS 35.0%
!!! ATGGCTATGCCATTTTCATT+TGG - chr8.1:1660754-1660773 MS.gene012664:intron 35.0%
!!! CAAGAATCTGTTGCCATTTT+AGG - chr8.1:1661411-1661430 MS.gene012664:intron 35.0%
ACAGTTGCAAGAAGAATCAG+AGG + chr8.1:1660727-1660746 None:intergenic 40.0%
ATAGAAGGACCCAATTGACA+AGG - chr8.1:1660516-1660535 MS.gene012664:intron 40.0%
ATAGCAAACCTCATGGCAAT+GGG + chr8.1:1662105-1662124 None:intergenic 40.0%
ATATGCAAGGTGAAGTCAGA+AGG - chr8.1:1662196-1662215 MS.gene012664:CDS 40.0%
ATGAGCCTTAGAAATGCTGA+TGG + chr8.1:1660889-1660908 None:intergenic 40.0%
ATGGTTTACGTCGTCAATTC+CGG - chr8.1:1660240-1660259 MS.gene012664:CDS 40.0%
CAAGTCACACCCATAATTCT+TGG + chr8.1:1661549-1661568 None:intergenic 40.0%
CGCGTTAAAGTTACTCAATC+CGG - chr8.1:1660468-1660487 MS.gene012664:CDS 40.0%
CGGATTGAGTAACTTTAACG+CGG + chr8.1:1660470-1660489 None:intergenic 40.0%
GATTGTGTCCAACAAAATCG+AGG + chr8.1:1661088-1661107 None:intergenic 40.0%
GGATTGAGTAACTTTAACGC+GGG + chr8.1:1660469-1660488 None:intergenic 40.0%
GTTTAAGAAGAGAGAAACGG+CGG - chr8.1:1660212-1660231 MS.gene012664:CDS 40.0%
GTTTCATGATTGCCAAGTTC+AGG - chr8.1:1660909-1660928 MS.gene012664:intron 40.0%
TAGAAGGACCCAATTGACAA+GGG - chr8.1:1660517-1660536 MS.gene012664:intron 40.0%
TAGACATAGAGATCGGAGAT+TGG - chr8.1:1660133-1660152 MS.gene012664:CDS 40.0%
TCTGATTCTTCTTGCAACTG+TGG - chr8.1:1660726-1660745 MS.gene012664:intron 40.0%
TTGACAGGTGCACATACATT+AGG - chr8.1:1661832-1661851 MS.gene012664:intron 40.0%
! AGAGACATTATGATGGGAAG+AGG - chr8.1:1662033-1662052 MS.gene012664:intron 40.0%
! ATGTGATGCCTCGATTTTGT+TGG - chr8.1:1661077-1661096 MS.gene012664:CDS 40.0%
! CAAGGGTATGTCTATGACTT+TGG - chr8.1:1660534-1660553 MS.gene012664:intron 40.0%
!! AAAAAGTGTTGGTTGCACGT+GGG + chr8.1:1661514-1661533 None:intergenic 40.0%
!! AACACACCTTTTGATGGATC+CGG + chr8.1:1660490-1660509 None:intergenic 40.0%
!! AGCTCTGAAATAGCTTCTTC+AGG - chr8.1:1661120-1661139 MS.gene012664:CDS 40.0%
!! GCTGATTTGAATGATACGGT+TGG + chr8.1:1660597-1660616 None:intergenic 40.0%
!! TCTAGCCCTGAAATGGATTA+TGG + chr8.1:1661648-1661667 None:intergenic 40.0%
AGAATAAAGAGCAGGACACG+TGG - chr8.1:1660382-1660401 MS.gene012664:CDS 45.0%
CATAGCAAACCTCATGGCAA+TGG + chr8.1:1662106-1662125 None:intergenic 45.0%
CATGATGTCTAGCCCTGAAA+TGG + chr8.1:1661655-1661674 None:intergenic 45.0%
CATGTGATTGATCGGATGGA+CGG - chr8.1:1660417-1660436 MS.gene012664:CDS 45.0%
CCAAGTGGAACCTGAATACT+TGG + chr8.1:1661279-1661298 None:intergenic 45.0%
CTCAATCCGGATCCATCAAA+AGG - chr8.1:1660481-1660500 MS.gene012664:CDS 45.0%
CTGATCCATAGCAAACCTCA+TGG + chr8.1:1662112-1662131 None:intergenic 45.0%
GACGAGGTAGACATAGAGAT+CGG - chr8.1:1660126-1660145 MS.gene012664:CDS 45.0%
GATGCATGTGATTGATCGGA+TGG - chr8.1:1660413-1660432 MS.gene012664:CDS 45.0%
GTGCACCATCAGCATTTCTA+AGG - chr8.1:1660881-1660900 MS.gene012664:intron 45.0%
TCAACTGTTACTGTCGGTGA+AGG + chr8.1:1661351-1661370 None:intergenic 45.0%
TCTGCACAAGATACTTGTCC+TGG + chr8.1:1661210-1661229 None:intergenic 45.0%
TGGTGGTTGAGATCACTAAC+TGG - chr8.1:1661599-1661618 MS.gene012664:CDS 45.0%
TGGTTTACGTCGTCAATTCC+GGG - chr8.1:1660241-1660260 MS.gene012664:CDS 45.0%
! AAGGTATCAGTGTCACTCTC+TGG - chr8.1:1661249-1661268 MS.gene012664:CDS 45.0%
! ATGATGGGAAGAGGTCTGTT+TGG - chr8.1:1662042-1662061 MS.gene012664:intron 45.0%
! CCAAGTATTCAGGTTCCACT+TGG - chr8.1:1661276-1661295 MS.gene012664:intron 45.0%
! GGACACTGCATAAGCATTGT+TGG - chr8.1:1661859-1661878 MS.gene012664:intron 45.0%
!! CATTGCCATGAGGTTTGCTA+TGG - chr8.1:1662104-1662123 MS.gene012664:CDS 45.0%
!! GAAAAAGTGTTGGTTGCACG+TGG + chr8.1:1661515-1661534 None:intergenic 45.0%
GAAATGATTCTCACTGCCGC+CGG + chr8.1:1660306-1660325 None:intergenic 50.0%
GATCGGATGGACGGAATTGA+GGG - chr8.1:1660426-1660445 MS.gene012664:CDS 50.0%
GCGGCAGTGAGAATCATTTC+TGG - chr8.1:1660306-1660325 MS.gene012664:CDS 50.0%
GGTGCACATACATTAGGCGT+TGG - chr8.1:1661838-1661857 MS.gene012664:intron 50.0%
GGTTTACGTCGTCAATTCCG+GGG - chr8.1:1660242-1660261 MS.gene012664:CDS 50.0%
GTTTACGTCGTCAATTCCGG+GGG - chr8.1:1660243-1660262 MS.gene012664:CDS 50.0%
TAAGAAGAGAGAAACGGCGG+AGG - chr8.1:1660215-1660234 MS.gene012664:CDS 50.0%
TGATCGGATGGACGGAATTG+AGG - chr8.1:1660425-1660444 MS.gene012664:CDS 50.0%
! CTCTGGAGGACCAAGTATTC+AGG - chr8.1:1661266-1661285 MS.gene012664:intron 50.0%
! GTATCAGTGTCACTCTCTGG+AGG - chr8.1:1661252-1661271 MS.gene012664:CDS 50.0%
!! TGGGCATGCTAGTCTTAGTG+AGG + chr8.1:1661938-1661957 None:intergenic 50.0%
ACAGTGCAGTGAAGAGGTGG+AGG - chr8.1:1660185-1660204 MS.gene012664:CDS 55.0%
AGGACAGTGCAGTGAAGAGG+TGG - chr8.1:1660182-1660201 MS.gene012664:CDS 55.0%
ATGGCAATGGGTGCAGTTCG+TGG + chr8.1:1662093-1662112 None:intergenic 55.0%
CAATTCCGGGGGTAGAGGAA+TGG - chr8.1:1660254-1660273 MS.gene012664:CDS 55.0%
GAACTGCACCCATTGCCATG+AGG - chr8.1:1662094-1662113 MS.gene012664:CDS 55.0%
GAAGTCGACGGAGATGAGGA+GGG - chr8.1:1660159-1660178 MS.gene012664:CDS 55.0%
GAGAGAAACGGCGGAGGTTA+TGG - chr8.1:1660221-1660240 MS.gene012664:CDS 55.0%
GGAGATTGGTGCGAAGTCGA+CGG - chr8.1:1660147-1660166 MS.gene012664:CDS 55.0%
CACCACCATTCCTCTACCCC+CGG + chr8.1:1660262-1660281 None:intergenic 60.0%
CGAAGTCGACGGAGATGAGG+AGG - chr8.1:1660158-1660177 MS.gene012664:CDS 60.0%
GGGAGGACAGTGCAGTGAAG+AGG - chr8.1:1660179-1660198 MS.gene012664:CDS 60.0%
GGTGCGGTGCCTCTATATGC+CGG - chr8.1:1660284-1660303 MS.gene012664:CDS 60.0%
GTCGTCAATTCCGGGGGTAG+AGG - chr8.1:1660249-1660268 MS.gene012664:CDS 60.0%
GTGCGAAGTCGACGGAGATG+AGG - chr8.1:1660155-1660174 MS.gene012664:CDS 60.0%
TCACTGCCGCCGGCATATAG+AGG + chr8.1:1660296-1660315 None:intergenic 60.0%
TTCCGGGGGTAGAGGAATGG+TGG - chr8.1:1660257-1660276 MS.gene012664:CDS 60.0%
! CGAGGCATCACATCCCTGCA+TGG + chr8.1:1661070-1661089 None:intergenic 60.0%
!! GAGGAATGGTGGTGGTGGTG+CGG - chr8.1:1660268-1660287 MS.gene012664:CDS 60.0%
!! GGGTAGAGGAATGGTGGTGG+TGG - chr8.1:1660263-1660282 MS.gene012664:CDS 60.0%
CGGGGGTAGAGGAATGGTGG+TGG - chr8.1:1660260-1660279 MS.gene012664:CDS 65.0%
GCGGTGCCTCTATATGCCGG+CGG - chr8.1:1660287-1660306 MS.gene012664:CDS 65.0%
GTCGACGGAGATGAGGAGGG+AGG - chr8.1:1660162-1660181 MS.gene012664:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 1660120 1662239 1660120 ID=MS.gene012664
chr8.1 mRNA 1660120 1662239 1660120 ID=MS.gene012664.t1;Parent=MS.gene012664
chr8.1 exon 1662048 1662239 1662048 ID=MS.gene012664.t1.exon1;Parent=MS.gene012664.t1
chr8.1 CDS 1662048 1662239 1662048 ID=cds.MS.gene012664.t1;Parent=MS.gene012664.t1
chr8.1 exon 1661429 1661662 1661429 ID=MS.gene012664.t1.exon2;Parent=MS.gene012664.t1
chr8.1 CDS 1661429 1661662 1661429 ID=cds.MS.gene012664.t1;Parent=MS.gene012664.t1
chr8.1 exon 1660927 1661284 1660927 ID=MS.gene012664.t1.exon3;Parent=MS.gene012664.t1
chr8.1 CDS 1660927 1661284 1660927 ID=cds.MS.gene012664.t1;Parent=MS.gene012664.t1
chr8.1 exon 1660120 1660520 1660120 ID=MS.gene012664.t1.exon4;Parent=MS.gene012664.t1
chr8.1 CDS 1660120 1660520 1660120 ID=cds.MS.gene012664.t1;Parent=MS.gene012664.t1
Gene Sequence

>MS.gene012664

ATGTTCGACGAGGTAGACATAGAGATCGGAGATTGGTGCGAAGTCGACGGAGATGAGGAGGGAGGACAGTGCAGTGAAGAGGTGGAGGAATCGTTTAAGAAGAGAGAAACGGCGGAGGTTATGGTTTACGTCGTCAATTCCGGGGGTAGAGGAATGGTGGTGGTGGTGCGGTGCCTCTATATGCCGGCGGCAGTGAGAATCATTTCTGGAAAAGGGTTACAGATTTAAAAGAATTAAAATCTGGTATAAAAAAAATTAAGAAAGAATAAAGAGCAGGACACGTGGCTTATTTAGATGCATGTGATTGATCGGATGGACGGAATTGAGGGAAAGTCACATGACTTTGCCCGCGTTAAAGTTACTCAATCCGGATCCATCAAAAGGTGTGTTCTGTAAATAGAAGGACCCAATTGACAAGGGTATGTCTATGACTTTGGCAAATATGTGCCAACTCAACTCAATTATACTACACAGCCAACCGTATCATTCAAATCAGCAAACTCACAAACACTAGCGCAAATATAAATAAATTTCCATTATTCCACATACTAACACTTAACACATTCCTTCTGCACAGAAAAGAAAAGAAATGGAAATATCTCTTCCTCTGATTCTTCTTGCAACTGTGGTTATTATGGCTATGCCATTTTCATTTGGTGTAAAAGGAAACCAACTTTCTTACAACTACTACAAGAATTCGTGTCCAAACTTAGAAAGTTTGGTCGAGAGAGAATTGATGAGCGTATTCTTGAGAGATATTCGTGCACCATCAGCATTTCTAAGGCTCATGTTTCATGATTGCCAAGTTCAGGTAATTACTATAGCTAGTAGCACCGATTGCTTGACTCACAAACTTAACAATTTTAGACAAATATTACAATGTAGGTGTTTTTTATGTCGTTTAAGGTTGCTTGGACCTCACTTTGTTTGTTTTGTTGAATTAATTTCCATGCAGGGATGTGATGCCTCGATTTTGTTGGACACAATCTACGCTACTCAAAGCTCTGAAATAGCTTCTTCAGGAAACTTTGCAATCAGAAATAGGGAAACAATCAACGACATAAAATCGATATTAGAAGAAGAATGTCCAGGACAAGTATCTTGTGCAGATATCATTGTTTTAGCTGCTAAGGTATCAGTGTCACTCTCTGGAGGACCAAGTATTCAGGTTCCACTTGGAAGAAAAGATTCAAGAACTTCTAGTTCTAAAGAGGCTGATGCTAAGCTTCCTTCACCGACAGTAACAGTTGACGAATTTTTATCCATTTTCAAATCTAAAGGAATGAACATTCAAGAATCTGTTGCCATTTTAGGTAATGCATATCAACCATAAATTATAGTTGAACTCATTTCGTCAGGGAAAGTCTCAAAAGTATAAGTTTTACACAATTCCCACGTGCAACCAACACTTTTTCCTCCCTTTTTACCAAGAATTATGGGTGTGACTTGTGAGAAATCTCAAATATCTGCTCTTTTTGTTGGTGGTTGAGATCACTAACTGGAGTAACTATTAGCTTCATCTAATCCATAATCCATTTCAGGGCTAGACATCATGATATCCAGATATACAACTCATGAACACTTATTCTTTAAATTCCTAATAGCATTTGACATTTTATTTTATTTTTTCTTGTCATTTAAAGTGTTATACTAATACAGATAAAAATTGTTACCTAAGATAAGCAATGGTTTTTGATCTGTTACTATTAATTTTGACAGGTGCACATACATTAGGCGTTGGACACTGCATAAGCATTGTTGGCAGATTGTATAATCAACAGATAAGAGGAGACAATATGGATTTGGGTTATGAAACCTCACTAAGACTAGCATGCCCAACTGTTATTCCTATGACAAACCTAACATTTGTGCCTAATGACATAACCCCAACAATATTTGACAATCATTATTACAGAGACATTATGATGGGAAGAGGTCTGTTTGGTATTGACTCGAGCATTTCTAGAGATCCACGAACTGCACCCATTGCCATGAGGTTTGCTATGGATCAGAGCTACTTCTTTGAGACCTTCTCATCTGCATTTGTTAAGCTTTCTGCTAGCAATGTTCTCACAAATATGCAAGGTGAAGTCAGAAGGAAATGCAACCAGCTGAACTAG
Protein sequence

>MS.gene012664.t1

MFDEVDIEIGDWCEVDGDEEGGQCSEEVEESFKKRETAEVMVYVVNSGGRGMVVVVRCLYMPAAKRKEMEISLPLILLATVVIMAMPFSFGVKGNQLSYNYYKNSCPNLESLVERELMSVFLRDIRAPSAFLRLMFHDCQVQGCDASILLDTIYATQSSEIASSGNFAIRNRETINDIKSILEEECPGQVSCADIIVLAAKVSVSLSGGPSIQVPLGRKDSRTSSSKEADAKLPSPTVTVDEFLSIFKSKGMNIQESVAILGAHTLGVGHCISIVGRLYNQQIRGDNMDLGYETSLRLACPTVIPMTNLTFVPNDITPTIFDNHYYRDIMMGRGLFGIDSSISRDPRTAPIAMRFAMDQSYFFETFSSAFVKLSASNVLTNMQGEVRRKCNQLN