Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57129.t1 | XP_013442159.1 | 91.7 | 301 | 25 | 0 | 22 | 322 | 26 | 326 | 3.20E-154 | 554.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57129.t1 | Q9FL16 | 63.9 | 280 | 96 | 3 | 26 | 305 | 28 | 302 | 2.2e-103 | 377.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57129.t1 | I3T3G6 | 91.7 | 301 | 25 | 0 | 22 | 322 | 26 | 326 | 2.3e-154 | 554.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047065 | MS.gene57129 | PPI |
MS.gene85778 | MS.gene57129 | PPI |
MS.gene41565 | MS.gene57129 | PPI |
MS.gene24862 | MS.gene57129 | PPI |
MS.gene009689 | MS.gene57129 | PPI |
MS.gene012254 | MS.gene57129 | PPI |
MS.gene26286 | MS.gene57129 | PPI |
MS.gene049488 | MS.gene57129 | PPI |
MS.gene025145 | MS.gene57129 | PPI |
MS.gene98878 | MS.gene57129 | PPI |
MS.gene49484 | MS.gene57129 | PPI |
MS.gene01164 | MS.gene57129 | PPI |
MS.gene38511 | MS.gene57129 | PPI |
MS.gene036786 | MS.gene57129 | PPI |
MS.gene017207 | MS.gene57129 | PPI |
MS.gene57129 | MS.gene026111 | PPI |
MS.gene62417 | MS.gene57129 | PPI |
MS.gene002194 | MS.gene57129 | PPI |
MS.gene012253 | MS.gene57129 | PPI |
MS.gene008562 | MS.gene57129 | PPI |
MS.gene26287 | MS.gene57129 | PPI |
MS.gene051844 | MS.gene57129 | PPI |
MS.gene042162 | MS.gene57129 | PPI |
MS.gene051232 | MS.gene57129 | PPI |
MS.gene071927 | MS.gene57129 | PPI |
MS.gene017208 | MS.gene57129 | PPI |
MS.gene002195 | MS.gene57129 | PPI |
MS.gene68855 | MS.gene57129 | PPI |
MS.gene009691 | MS.gene57129 | PPI |
MS.gene57129 | MS.gene61508 | PPI |
MS.gene012664 | MS.gene57129 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57129.t1 | MTR_0286s0010 | 89.937 | 318 | 21 | 1 | 13 | 330 | 17 | 323 | 0.0 | 587 |
MS.gene57129.t1 | MTR_6g008075 | 89.937 | 318 | 21 | 1 | 13 | 330 | 17 | 323 | 0.0 | 587 |
MS.gene57129.t1 | MTR_8g062780 | 52.518 | 278 | 129 | 2 | 25 | 300 | 18 | 294 | 8.39e-108 | 319 |
MS.gene57129.t1 | MTR_1g090760 | 48.658 | 298 | 149 | 3 | 15 | 309 | 13 | 309 | 2.38e-102 | 305 |
MS.gene57129.t1 | MTR_7g029030 | 45.255 | 274 | 145 | 4 | 27 | 300 | 22 | 290 | 4.49e-79 | 245 |
MS.gene57129.t1 | MTR_5g016010 | 43.197 | 294 | 161 | 4 | 9 | 298 | 6 | 297 | 2.19e-78 | 244 |
MS.gene57129.t1 | MTR_1g009750 | 43.537 | 294 | 152 | 6 | 16 | 298 | 6 | 296 | 2.72e-77 | 241 |
MS.gene57129.t1 | MTR_1g101830 | 43.234 | 303 | 160 | 7 | 1 | 300 | 1 | 294 | 1.86e-72 | 228 |
MS.gene57129.t1 | MTR_4g087965 | 38.994 | 318 | 169 | 7 | 6 | 301 | 2 | 316 | 7.11e-72 | 228 |
MS.gene57129.t1 | MTR_4g095450 | 43.223 | 273 | 148 | 4 | 28 | 298 | 25 | 292 | 6.11e-70 | 222 |
MS.gene57129.t1 | MTR_4g127670 | 44.161 | 274 | 144 | 6 | 29 | 298 | 23 | 291 | 5.38e-69 | 219 |
MS.gene57129.t1 | MTR_1g009750 | 39.796 | 294 | 146 | 7 | 16 | 298 | 6 | 279 | 3.12e-64 | 207 |
MS.gene57129.t1 | MTR_5g022870 | 39.116 | 294 | 170 | 6 | 10 | 299 | 1 | 289 | 4.68e-61 | 199 |
MS.gene57129.t1 | MTR_8g075100 | 39.649 | 285 | 165 | 5 | 30 | 312 | 26 | 305 | 2.41e-60 | 197 |
MS.gene57129.t1 | MTR_1g077000 | 40.433 | 277 | 148 | 7 | 30 | 304 | 39 | 300 | 3.35e-59 | 194 |
MS.gene57129.t1 | MTR_1g038680 | 41.762 | 261 | 143 | 6 | 34 | 288 | 33 | 290 | 1.30e-58 | 193 |
MS.gene57129.t1 | MTR_1g025980 | 36.334 | 311 | 187 | 7 | 19 | 325 | 13 | 316 | 1.65e-58 | 192 |
MS.gene57129.t1 | MTR_4g122640 | 40.860 | 279 | 158 | 6 | 28 | 304 | 36 | 309 | 8.28e-58 | 191 |
MS.gene57129.t1 | MTR_3g072190 | 35.714 | 308 | 186 | 5 | 9 | 312 | 1 | 300 | 1.40e-57 | 190 |
MS.gene57129.t1 | MTR_5g074970 | 36.156 | 307 | 174 | 8 | 1 | 298 | 1 | 294 | 6.91e-57 | 188 |
MS.gene57129.t1 | MTR_4g132110 | 36.275 | 306 | 181 | 6 | 1 | 300 | 1 | 298 | 3.24e-56 | 187 |
MS.gene57129.t1 | MTR_7g086870 | 40.149 | 269 | 150 | 5 | 30 | 298 | 22 | 279 | 3.71e-56 | 186 |
MS.gene57129.t1 | MTR_3g094650 | 37.542 | 301 | 167 | 8 | 8 | 303 | 10 | 294 | 3.98e-56 | 186 |
MS.gene57129.t1 | MTR_6g027440 | 37.540 | 309 | 180 | 6 | 4 | 312 | 1 | 296 | 4.79e-56 | 186 |
MS.gene57129.t1 | MTR_7g072510 | 39.146 | 281 | 161 | 5 | 19 | 298 | 9 | 280 | 1.09e-55 | 185 |
MS.gene57129.t1 | MTR_4g029190 | 40.293 | 273 | 150 | 7 | 34 | 303 | 50 | 312 | 3.97e-55 | 184 |
MS.gene57129.t1 | MTR_4g031140 | 36.218 | 312 | 189 | 6 | 8 | 315 | 6 | 311 | 5.94e-55 | 184 |
MS.gene57129.t1 | MTR_4g132490 | 36.131 | 274 | 171 | 3 | 28 | 300 | 27 | 297 | 6.09e-55 | 183 |
MS.gene57129.t1 | MTR_2g084090 | 36.655 | 281 | 168 | 5 | 26 | 305 | 21 | 292 | 1.33e-54 | 182 |
MS.gene57129.t1 | MTR_7g086820 | 38.489 | 278 | 163 | 4 | 23 | 300 | 13 | 282 | 1.88e-54 | 181 |
MS.gene57129.t1 | MTR_4g132110 | 36.013 | 311 | 180 | 7 | 1 | 300 | 1 | 303 | 2.22e-54 | 182 |
MS.gene57129.t1 | MTR_4g133800 | 39.636 | 275 | 152 | 9 | 31 | 303 | 42 | 304 | 6.68e-54 | 181 |
MS.gene57129.t1 | MTR_4g030890 | 37.500 | 288 | 170 | 6 | 26 | 309 | 96 | 377 | 7.88e-54 | 183 |
MS.gene57129.t1 | MTR_7g072480 | 39.146 | 281 | 152 | 7 | 28 | 303 | 22 | 288 | 8.97e-54 | 180 |
MS.gene57129.t1 | MTR_5g021060 | 34.932 | 292 | 184 | 5 | 34 | 322 | 34 | 322 | 2.91e-53 | 179 |
MS.gene57129.t1 | MTR_5g083860 | 34.495 | 287 | 170 | 5 | 12 | 292 | 13 | 287 | 3.04e-53 | 179 |
MS.gene57129.t1 | MTR_4g029200 | 38.267 | 277 | 160 | 6 | 28 | 303 | 44 | 310 | 6.47e-53 | 178 |
MS.gene57129.t1 | MTR_5g049280 | 37.193 | 285 | 168 | 6 | 23 | 300 | 26 | 306 | 8.18e-53 | 178 |
MS.gene57129.t1 | MTR_2g029800 | 38.710 | 279 | 162 | 6 | 26 | 299 | 25 | 299 | 1.45e-52 | 178 |
MS.gene57129.t1 | MTR_7g093370 | 35.855 | 304 | 185 | 6 | 5 | 301 | 42 | 342 | 1.88e-52 | 178 |
MS.gene57129.t1 | MTR_1g115900 | 40.278 | 288 | 156 | 10 | 20 | 303 | 18 | 293 | 2.12e-52 | 177 |
MS.gene57129.t1 | MTR_4g046713 | 37.500 | 280 | 162 | 8 | 26 | 299 | 23 | 295 | 3.18e-52 | 176 |
MS.gene57129.t1 | MTR_2g437770 | 37.023 | 262 | 150 | 7 | 30 | 288 | 50 | 299 | 3.86e-52 | 176 |
MS.gene57129.t1 | MTR_0155s0040 | 36.786 | 280 | 159 | 7 | 23 | 299 | 20 | 284 | 4.05e-52 | 176 |
MS.gene57129.t1 | MTR_2g029815 | 38.571 | 280 | 163 | 6 | 26 | 300 | 25 | 300 | 6.25e-52 | 176 |
MS.gene57129.t1 | MTR_2g029820 | 39.286 | 280 | 161 | 7 | 26 | 300 | 25 | 300 | 9.16e-52 | 176 |
MS.gene57129.t1 | MTR_1g086320 | 39.130 | 276 | 155 | 7 | 26 | 293 | 26 | 296 | 1.00e-51 | 175 |
MS.gene57129.t1 | MTR_2g029830 | 38.078 | 281 | 163 | 7 | 26 | 300 | 24 | 299 | 1.68e-51 | 175 |
MS.gene57129.t1 | MTR_2g084080 | 34.448 | 299 | 177 | 6 | 26 | 317 | 21 | 307 | 2.32e-51 | 174 |
MS.gene57129.t1 | MTR_4g029170 | 34.932 | 292 | 177 | 7 | 13 | 299 | 7 | 290 | 3.02e-51 | 173 |
MS.gene57129.t1 | MTR_7g107520 | 37.415 | 294 | 167 | 10 | 13 | 298 | 5 | 289 | 4.22e-51 | 173 |
MS.gene57129.t1 | MTR_1g066640 | 36.496 | 274 | 166 | 4 | 27 | 298 | 24 | 291 | 4.97e-51 | 173 |
MS.gene57129.t1 | MTR_3g092990 | 37.241 | 290 | 171 | 5 | 8 | 294 | 9 | 290 | 6.00e-51 | 173 |
MS.gene57129.t1 | MTR_3g467600 | 36.129 | 310 | 177 | 10 | 26 | 329 | 23 | 317 | 1.03e-50 | 172 |
MS.gene57129.t1 | MTR_8g076820 | 35.870 | 276 | 171 | 5 | 28 | 300 | 28 | 300 | 1.22e-50 | 172 |
MS.gene57129.t1 | MTR_2g029750 | 38.434 | 281 | 162 | 7 | 26 | 300 | 25 | 300 | 1.72e-50 | 172 |
MS.gene57129.t1 | MTR_1g086490 | 37.722 | 281 | 159 | 6 | 26 | 293 | 26 | 303 | 1.83e-50 | 172 |
MS.gene57129.t1 | MTR_7g026990 | 37.086 | 302 | 172 | 8 | 4 | 303 | 9 | 294 | 2.32e-50 | 171 |
MS.gene57129.t1 | MTR_6g043460 | 34.507 | 284 | 176 | 5 | 30 | 312 | 36 | 310 | 3.32e-50 | 171 |
MS.gene57129.t1 | MTR_5g014100 | 36.201 | 279 | 165 | 6 | 30 | 299 | 26 | 300 | 3.61e-50 | 171 |
MS.gene57129.t1 | MTR_3g466180 | 38.776 | 294 | 169 | 6 | 11 | 303 | 12 | 295 | 4.03e-50 | 171 |
MS.gene57129.t1 | MTR_2g084020 | 34.752 | 282 | 168 | 5 | 26 | 303 | 21 | 290 | 5.71e-50 | 170 |
MS.gene57129.t1 | MTR_1g066710 | 35.401 | 274 | 169 | 4 | 27 | 298 | 24 | 291 | 7.85e-50 | 170 |
MS.gene57129.t1 | MTR_2g088770 | 35.932 | 295 | 176 | 8 | 16 | 303 | 9 | 297 | 9.86e-50 | 169 |
MS.gene57129.t1 | MTR_2g029560 | 36.331 | 278 | 168 | 7 | 28 | 300 | 22 | 295 | 1.14e-49 | 170 |
MS.gene57129.t1 | MTR_3g466200 | 34.050 | 279 | 173 | 6 | 23 | 298 | 18 | 288 | 1.19e-49 | 169 |
MS.gene57129.t1 | MTR_3g094670 | 35.017 | 297 | 171 | 6 | 8 | 298 | 10 | 290 | 1.45e-49 | 169 |
MS.gene57129.t1 | MTR_4g083710 | 34.797 | 296 | 179 | 8 | 15 | 305 | 12 | 298 | 1.59e-49 | 169 |
MS.gene57129.t1 | MTR_5g074860 | 35.452 | 299 | 176 | 9 | 12 | 304 | 11 | 298 | 1.72e-49 | 169 |
MS.gene57129.t1 | MTR_2g008710 | 35.816 | 282 | 171 | 6 | 12 | 291 | 9 | 282 | 1.72e-49 | 169 |
MS.gene57129.t1 | MTR_1g066680 | 36.918 | 279 | 163 | 6 | 24 | 298 | 21 | 290 | 5.57e-49 | 167 |
MS.gene57129.t1 | MTR_1g066380 | 34.799 | 273 | 170 | 4 | 28 | 298 | 25 | 291 | 7.68e-49 | 167 |
MS.gene57129.t1 | MTR_3g094630 | 34.722 | 288 | 169 | 6 | 10 | 291 | 9 | 283 | 8.34e-49 | 167 |
MS.gene57129.t1 | MTR_2g084110 | 33.445 | 299 | 180 | 6 | 26 | 317 | 21 | 307 | 1.20e-48 | 166 |
MS.gene57129.t1 | MTR_2g084010 | 34.043 | 282 | 170 | 5 | 26 | 303 | 21 | 290 | 1.86e-48 | 166 |
MS.gene57129.t1 | MTR_5g017850 | 33.898 | 295 | 182 | 5 | 12 | 300 | 9 | 296 | 2.55e-48 | 166 |
MS.gene57129.t1 | MTR_4g125940 | 36.624 | 314 | 171 | 12 | 9 | 314 | 14 | 307 | 2.85e-48 | 166 |
MS.gene57129.t1 | MTR_5g017860 | 33.559 | 295 | 183 | 5 | 12 | 300 | 9 | 296 | 6.35e-48 | 165 |
MS.gene57129.t1 | MTR_2g084000 | 33.887 | 301 | 184 | 7 | 4 | 303 | 5 | 291 | 1.58e-47 | 164 |
MS.gene57129.t1 | MTR_4g029180 | 34.106 | 302 | 188 | 7 | 4 | 303 | 1 | 293 | 5.06e-47 | 162 |
MS.gene57129.t1 | MTR_5g074740 | 36.299 | 281 | 164 | 8 | 28 | 303 | 23 | 293 | 5.99e-46 | 159 |
MS.gene57129.t1 | MTR_5g074760 | 35.587 | 281 | 166 | 8 | 28 | 303 | 23 | 293 | 8.67e-46 | 159 |
MS.gene57129.t1 | MTR_5g074710 | 34.114 | 299 | 182 | 8 | 10 | 303 | 5 | 293 | 9.44e-46 | 159 |
MS.gene57129.t1 | MTR_3g105790 | 33.446 | 296 | 186 | 5 | 8 | 299 | 3 | 291 | 1.02e-45 | 159 |
MS.gene57129.t1 | MTR_2g029730 | 35.587 | 281 | 164 | 7 | 28 | 299 | 23 | 295 | 1.17e-45 | 159 |
MS.gene57129.t1 | MTR_1g054205 | 36.301 | 292 | 173 | 11 | 16 | 300 | 11 | 296 | 1.48e-45 | 159 |
MS.gene57129.t1 | MTR_4g074990 | 35.686 | 255 | 152 | 6 | 15 | 265 | 9 | 255 | 4.34e-45 | 157 |
MS.gene57129.t1 | MTR_2g040000 | 35.473 | 296 | 174 | 7 | 15 | 299 | 11 | 300 | 5.90e-45 | 157 |
MS.gene57129.t1 | MTR_2g029850 | 34.520 | 281 | 175 | 6 | 26 | 301 | 25 | 301 | 1.38e-44 | 157 |
MS.gene57129.t1 | MTR_4g074995 | 34.130 | 293 | 172 | 8 | 15 | 305 | 9 | 282 | 1.97e-44 | 155 |
MS.gene57129.t1 | MTR_2g029740 | 35.714 | 280 | 171 | 6 | 26 | 300 | 25 | 300 | 2.69e-44 | 156 |
MS.gene57129.t1 | MTR_2g028980 | 35.587 | 281 | 170 | 7 | 26 | 300 | 25 | 300 | 2.99e-44 | 156 |
MS.gene57129.t1 | MTR_2g029860 | 33.993 | 303 | 188 | 7 | 3 | 300 | 5 | 300 | 3.04e-44 | 156 |
MS.gene57129.t1 | MTR_4g114210 | 35.461 | 282 | 165 | 8 | 17 | 292 | 7 | 277 | 3.07e-44 | 155 |
MS.gene57129.t1 | MTR_3g092990 | 35.986 | 289 | 163 | 5 | 9 | 294 | 10 | 279 | 3.40e-44 | 155 |
MS.gene57129.t1 | MTR_3g072190 | 37.288 | 236 | 141 | 3 | 77 | 312 | 5 | 233 | 3.72e-44 | 153 |
MS.gene57129.t1 | MTR_2g029910 | 33.569 | 283 | 174 | 5 | 26 | 300 | 26 | 302 | 4.25e-44 | 155 |
MS.gene57129.t1 | MTR_5g033470 | 35.764 | 288 | 169 | 8 | 34 | 311 | 77 | 358 | 1.32e-43 | 155 |
MS.gene57129.t1 | MTR_2g029830 | 40.435 | 230 | 127 | 6 | 77 | 300 | 6 | 231 | 4.12e-43 | 151 |
MS.gene57129.t1 | MTR_6g043240 | 33.922 | 283 | 176 | 5 | 30 | 312 | 42 | 313 | 7.85e-43 | 152 |
MS.gene57129.t1 | MTR_2g008160 | 35.154 | 293 | 175 | 8 | 26 | 314 | 20 | 301 | 1.55e-41 | 148 |
MS.gene57129.t1 | MTR_4g074980 | 35.021 | 237 | 148 | 4 | 27 | 262 | 22 | 253 | 2.38e-41 | 145 |
MS.gene57129.t1 | MTR_1g022970 | 33.333 | 276 | 175 | 6 | 30 | 300 | 46 | 317 | 9.60e-41 | 147 |
MS.gene57129.t1 | MTR_2g099175 | 34.084 | 311 | 186 | 8 | 27 | 331 | 33 | 330 | 1.39e-40 | 146 |
MS.gene57129.t1 | MTR_2g067440 | 32.024 | 331 | 188 | 9 | 3 | 303 | 36 | 359 | 1.89e-40 | 147 |
MS.gene57129.t1 | MTR_6g043280 | 31.734 | 271 | 176 | 5 | 30 | 300 | 41 | 302 | 1.18e-39 | 143 |
MS.gene57129.t1 | MTR_4g125940 | 38.931 | 262 | 139 | 11 | 61 | 314 | 4 | 252 | 1.62e-39 | 141 |
MS.gene57129.t1 | MTR_2g078610 | 32.468 | 308 | 173 | 8 | 28 | 303 | 74 | 378 | 3.96e-39 | 144 |
MS.gene57129.t1 | MTR_2g008730 | 33.101 | 287 | 157 | 6 | 8 | 291 | 4 | 258 | 4.60e-39 | 141 |
MS.gene57129.t1 | MTR_2g078280 | 32.468 | 308 | 173 | 8 | 28 | 303 | 74 | 378 | 6.38e-39 | 143 |
MS.gene57129.t1 | MTR_2g077990 | 32.143 | 308 | 174 | 8 | 28 | 303 | 74 | 378 | 2.92e-38 | 141 |
MS.gene57129.t1 | MTR_1g066380 | 34.978 | 223 | 138 | 3 | 78 | 298 | 6 | 223 | 6.80e-37 | 134 |
MS.gene57129.t1 | MTR_4g074980 | 36.683 | 199 | 122 | 3 | 27 | 224 | 22 | 217 | 2.35e-36 | 134 |
MS.gene57129.t1 | MTR_0147s0010 | 30.847 | 295 | 166 | 8 | 30 | 303 | 77 | 354 | 7.94e-33 | 126 |
MS.gene57129.t1 | MTR_2g008160 | 38.333 | 180 | 105 | 4 | 26 | 205 | 20 | 193 | 3.73e-32 | 120 |
MS.gene57129.t1 | MTR_2g008160 | 31.849 | 292 | 151 | 8 | 26 | 314 | 20 | 266 | 1.94e-31 | 120 |
MS.gene57129.t1 | MTR_3g105790 | 34.579 | 214 | 133 | 3 | 90 | 299 | 5 | 215 | 1.15e-30 | 117 |
MS.gene57129.t1 | MTR_3g072210 | 37.931 | 174 | 101 | 3 | 142 | 314 | 54 | 221 | 5.78e-30 | 115 |
MS.gene57129.t1 | MTR_2g067450 | 34.529 | 223 | 138 | 6 | 28 | 246 | 9 | 227 | 5.81e-30 | 117 |
MS.gene57129.t1 | MTR_5g074860 | 30.100 | 299 | 153 | 9 | 12 | 304 | 11 | 259 | 6.77e-30 | 116 |
MS.gene57129.t1 | MTR_5g074700 | 36.310 | 168 | 96 | 5 | 106 | 270 | 6 | 165 | 2.18e-26 | 105 |
MS.gene57129.t1 | MTR_7g072490 | 31.718 | 227 | 93 | 5 | 77 | 303 | 2 | 166 | 4.65e-22 | 93.2 |
MS.gene57129.t1 | MTR_7g086790 | 42.975 | 121 | 64 | 2 | 78 | 198 | 17 | 132 | 1.33e-21 | 91.7 |
MS.gene57129.t1 | MTR_3g072260 | 36.090 | 133 | 76 | 3 | 15 | 140 | 4 | 134 | 1.26e-18 | 82.0 |
MS.gene57129.t1 | MTR_2g029880 | 31.481 | 162 | 96 | 4 | 144 | 301 | 9 | 159 | 1.87e-18 | 83.2 |
MS.gene57129.t1 | MTR_3g107060 | 26.336 | 262 | 129 | 8 | 53 | 304 | 97 | 304 | 3.43e-15 | 75.9 |
MS.gene57129.t1 | MTR_1g089005 | 39.655 | 116 | 63 | 2 | 33 | 143 | 18 | 131 | 3.92e-15 | 72.4 |
MS.gene57129.t1 | MTR_5g058120 | 35.294 | 136 | 78 | 3 | 163 | 298 | 2 | 127 | 1.46e-14 | 73.2 |
MS.gene57129.t1 | MTR_4g061140 | 27.230 | 213 | 111 | 7 | 105 | 312 | 38 | 211 | 8.44e-13 | 67.4 |
MS.gene57129.t1 | MTR_4g061140 | 27.230 | 213 | 111 | 7 | 105 | 312 | 72 | 245 | 1.12e-12 | 67.8 |
MS.gene57129.t1 | MTR_4g061140 | 27.230 | 213 | 111 | 7 | 105 | 312 | 72 | 245 | 1.18e-12 | 67.4 |
MS.gene57129.t1 | MTR_4g031040 | 31.707 | 123 | 66 | 3 | 143 | 264 | 26 | 131 | 2.40e-12 | 64.3 |
MS.gene57129.t1 | MTR_2g078560 | 26.667 | 195 | 112 | 4 | 140 | 303 | 98 | 292 | 3.04e-12 | 67.0 |
MS.gene57129.t1 | MTR_7g086785 | 42.466 | 73 | 40 | 1 | 77 | 149 | 4 | 74 | 5.45e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57129.t1 | AT5G40150 | 63.929 | 280 | 96 | 3 | 26 | 305 | 28 | 302 | 1.25e-135 | 390 |
MS.gene57129.t1 | AT3G28200 | 64.388 | 278 | 93 | 3 | 26 | 303 | 17 | 288 | 5.60e-132 | 380 |
MS.gene57129.t1 | AT5G47000 | 56.827 | 271 | 114 | 2 | 30 | 300 | 33 | 300 | 1.49e-111 | 328 |
MS.gene57129.t1 | AT4G17690 | 56.089 | 271 | 115 | 2 | 30 | 300 | 26 | 292 | 1.55e-107 | 318 |
MS.gene57129.t1 | AT1G24110 | 52.448 | 286 | 134 | 2 | 25 | 309 | 17 | 301 | 5.65e-107 | 317 |
MS.gene57129.t1 | AT4G37530 | 45.000 | 280 | 148 | 4 | 23 | 298 | 20 | 297 | 2.39e-80 | 249 |
MS.gene57129.t1 | AT4G37530 | 45.627 | 263 | 137 | 4 | 23 | 281 | 20 | 280 | 4.23e-77 | 239 |
MS.gene57129.t1 | AT4G37520 | 44.000 | 275 | 148 | 4 | 28 | 298 | 25 | 297 | 7.84e-77 | 240 |
MS.gene57129.t1 | AT5G67400 | 41.368 | 307 | 164 | 5 | 26 | 318 | 23 | 327 | 2.41e-76 | 238 |
MS.gene57129.t1 | AT5G14130 | 44.565 | 276 | 147 | 4 | 26 | 299 | 28 | 299 | 4.26e-76 | 238 |
MS.gene57129.t1 | AT5G14130 | 44.565 | 276 | 147 | 4 | 26 | 299 | 69 | 340 | 8.52e-76 | 238 |
MS.gene57129.t1 | AT4G37520 | 44.000 | 275 | 145 | 5 | 28 | 298 | 25 | 294 | 1.20e-74 | 234 |
MS.gene57129.t1 | AT3G49960 | 40.065 | 307 | 168 | 5 | 26 | 318 | 23 | 327 | 2.22e-72 | 228 |
MS.gene57129.t1 | AT2G18980 | 39.542 | 306 | 170 | 6 | 8 | 309 | 8 | 302 | 1.15e-70 | 224 |
MS.gene57129.t1 | AT4G30170 | 39.161 | 286 | 164 | 5 | 28 | 309 | 25 | 304 | 4.01e-66 | 212 |
MS.gene57129.t1 | AT5G51890 | 40.476 | 294 | 163 | 7 | 12 | 300 | 8 | 294 | 1.59e-65 | 211 |
MS.gene57129.t1 | AT2G34060 | 36.170 | 329 | 192 | 6 | 8 | 319 | 7 | 334 | 1.57e-63 | 206 |
MS.gene57129.t1 | AT3G17070 | 38.408 | 289 | 165 | 7 | 30 | 311 | 38 | 320 | 1.97e-60 | 198 |
MS.gene57129.t1 | AT5G17820 | 38.801 | 317 | 164 | 11 | 1 | 314 | 2 | 291 | 1.52e-59 | 195 |
MS.gene57129.t1 | AT5G17820 | 38.871 | 319 | 161 | 11 | 1 | 314 | 55 | 344 | 1.04e-58 | 194 |
MS.gene57129.t1 | AT4G16270 | 39.716 | 282 | 157 | 9 | 30 | 304 | 48 | 323 | 5.04e-58 | 192 |
MS.gene57129.t1 | AT4G33420 | 38.676 | 287 | 159 | 7 | 20 | 304 | 27 | 298 | 7.31e-58 | 191 |
MS.gene57129.t1 | AT4G33420 | 38.676 | 287 | 159 | 7 | 20 | 304 | 74 | 345 | 3.53e-57 | 190 |
MS.gene57129.t1 | AT5G05340 | 37.050 | 278 | 157 | 5 | 27 | 298 | 27 | 292 | 7.47e-57 | 188 |
MS.gene57129.t1 | AT4G36430 | 38.406 | 276 | 162 | 6 | 29 | 300 | 29 | 300 | 9.43e-57 | 188 |
MS.gene57129.t1 | AT1G05260 | 36.842 | 285 | 169 | 7 | 10 | 291 | 9 | 285 | 3.56e-56 | 186 |
MS.gene57129.t1 | AT2G22420 | 37.456 | 283 | 161 | 7 | 34 | 309 | 27 | 300 | 1.79e-55 | 185 |
MS.gene57129.t1 | AT5G66390 | 37.543 | 293 | 175 | 6 | 34 | 322 | 37 | 325 | 2.30e-55 | 184 |
MS.gene57129.t1 | AT1G71695 | 33.956 | 321 | 204 | 5 | 30 | 348 | 44 | 358 | 1.16e-54 | 183 |
MS.gene57129.t1 | AT5G42180 | 35.452 | 299 | 180 | 7 | 19 | 312 | 12 | 302 | 3.86e-54 | 181 |
MS.gene57129.t1 | AT4G11290 | 36.713 | 286 | 171 | 7 | 23 | 303 | 18 | 298 | 4.23e-54 | 181 |
MS.gene57129.t1 | AT2G18150 | 36.531 | 271 | 164 | 6 | 34 | 300 | 40 | 306 | 4.54e-54 | 181 |
MS.gene57129.t1 | AT4G31760 | 34.713 | 314 | 189 | 7 | 4 | 313 | 7 | 308 | 2.51e-53 | 179 |
MS.gene57129.t1 | AT1G30870 | 38.628 | 277 | 155 | 8 | 30 | 303 | 51 | 315 | 7.34e-53 | 178 |
MS.gene57129.t1 | AT3G50990 | 36.559 | 279 | 169 | 6 | 26 | 300 | 37 | 311 | 8.43e-53 | 178 |
MS.gene57129.t1 | AT2G18140 | 36.397 | 272 | 165 | 6 | 33 | 300 | 38 | 305 | 1.32e-52 | 177 |
MS.gene57129.t1 | AT5G19880 | 36.364 | 308 | 177 | 7 | 1 | 299 | 1 | 298 | 1.86e-52 | 177 |
MS.gene57129.t1 | AT2G37130 | 35.231 | 281 | 173 | 5 | 23 | 300 | 23 | 297 | 9.38e-52 | 175 |
MS.gene57129.t1 | AT4G21960 | 36.823 | 277 | 167 | 4 | 26 | 300 | 27 | 297 | 9.72e-52 | 175 |
MS.gene57129.t1 | AT4G08770 | 34.226 | 336 | 208 | 10 | 21 | 347 | 15 | 346 | 2.12e-51 | 174 |
MS.gene57129.t1 | AT2G24800 | 35.294 | 289 | 177 | 4 | 28 | 312 | 29 | 311 | 2.47e-51 | 174 |
MS.gene57129.t1 | AT2G37130 | 36.029 | 272 | 165 | 5 | 32 | 300 | 1 | 266 | 2.51e-51 | 173 |
MS.gene57129.t1 | AT1G14540 | 35.636 | 275 | 169 | 5 | 25 | 298 | 16 | 283 | 2.97e-51 | 173 |
MS.gene57129.t1 | AT3G21770 | 34.539 | 304 | 190 | 7 | 23 | 322 | 22 | 320 | 4.52e-51 | 173 |
MS.gene57129.t1 | AT2G38380 | 35.943 | 281 | 172 | 6 | 26 | 301 | 27 | 304 | 7.99e-51 | 173 |
MS.gene57129.t1 | AT4G08780 | 38.028 | 284 | 165 | 8 | 23 | 299 | 17 | 296 | 1.36e-50 | 172 |
MS.gene57129.t1 | AT3G49120 | 33.036 | 336 | 215 | 7 | 19 | 347 | 21 | 353 | 1.76e-50 | 172 |
MS.gene57129.t1 | AT3G32980 | 33.871 | 310 | 196 | 6 | 19 | 322 | 20 | 326 | 1.97e-50 | 172 |
MS.gene57129.t1 | AT1G05240 | 38.403 | 263 | 150 | 7 | 30 | 288 | 26 | 280 | 2.94e-50 | 171 |
MS.gene57129.t1 | AT1G05250 | 38.403 | 263 | 150 | 7 | 30 | 288 | 26 | 280 | 2.94e-50 | 171 |
MS.gene57129.t1 | AT2G35380 | 37.457 | 291 | 161 | 9 | 34 | 314 | 34 | 313 | 5.29e-50 | 171 |
MS.gene57129.t1 | AT5G06730 | 34.268 | 321 | 195 | 8 | 1 | 314 | 1 | 312 | 5.49e-50 | 171 |
MS.gene57129.t1 | AT1G68850 | 34.740 | 308 | 178 | 9 | 9 | 300 | 4 | 304 | 5.64e-50 | 171 |
MS.gene57129.t1 | AT3G03670 | 35.099 | 302 | 174 | 7 | 4 | 298 | 3 | 289 | 6.07e-50 | 170 |
MS.gene57129.t1 | AT3G01190 | 35.390 | 308 | 179 | 8 | 1 | 303 | 1 | 293 | 7.11e-50 | 170 |
MS.gene57129.t1 | AT2G38390 | 37.143 | 280 | 166 | 7 | 26 | 299 | 27 | 302 | 7.96e-50 | 171 |
MS.gene57129.t1 | AT5G06720 | 35.275 | 309 | 187 | 9 | 1 | 301 | 1 | 304 | 9.85e-50 | 170 |
MS.gene57129.t1 | AT1G14550 | 34.932 | 292 | 179 | 7 | 10 | 298 | 6 | 289 | 3.18e-49 | 168 |
MS.gene57129.t1 | AT3G49110 | 32.738 | 336 | 216 | 7 | 19 | 347 | 22 | 354 | 8.29e-49 | 168 |
MS.gene57129.t1 | AT5G58400 | 33.657 | 309 | 187 | 8 | 1 | 303 | 1 | 297 | 9.53e-49 | 167 |
MS.gene57129.t1 | AT5G58390 | 35.315 | 286 | 163 | 8 | 26 | 303 | 17 | 288 | 1.06e-48 | 167 |
MS.gene57129.t1 | AT2G39040 | 38.235 | 272 | 157 | 7 | 27 | 291 | 43 | 310 | 7.94e-48 | 165 |
MS.gene57129.t1 | AT5G64110 | 36.923 | 260 | 153 | 6 | 34 | 291 | 38 | 288 | 4.26e-47 | 163 |
MS.gene57129.t1 | AT4G33870 | 31.790 | 324 | 181 | 6 | 16 | 303 | 54 | 373 | 7.36e-46 | 162 |
MS.gene57129.t1 | AT1G49570 | 34.397 | 282 | 174 | 6 | 28 | 303 | 46 | 322 | 7.41e-46 | 160 |
MS.gene57129.t1 | AT5G64120 | 33.935 | 277 | 173 | 7 | 28 | 303 | 33 | 300 | 2.63e-45 | 158 |
MS.gene57129.t1 | AT1G44970 | 34.173 | 278 | 174 | 6 | 28 | 300 | 43 | 316 | 3.45e-45 | 158 |
MS.gene57129.t1 | AT3G17070 | 37.603 | 242 | 139 | 6 | 77 | 311 | 21 | 257 | 5.28e-45 | 156 |
MS.gene57129.t1 | AT4G25980 | 33.657 | 309 | 182 | 9 | 2 | 304 | 4 | 295 | 1.40e-44 | 156 |
MS.gene57129.t1 | AT5G19890 | 35.211 | 284 | 168 | 9 | 27 | 303 | 27 | 301 | 6.82e-44 | 154 |
MS.gene57129.t1 | AT1G34510 | 35.052 | 291 | 170 | 8 | 10 | 298 | 4 | 277 | 8.38e-44 | 154 |
MS.gene57129.t1 | AT5G15180 | 34.395 | 314 | 182 | 11 | 1 | 303 | 1 | 301 | 1.30e-43 | 154 |
MS.gene57129.t1 | AT5G39580 | 36.397 | 272 | 157 | 8 | 32 | 298 | 27 | 287 | 2.53e-43 | 152 |
MS.gene57129.t1 | AT5G22410 | 33.935 | 277 | 170 | 7 | 29 | 300 | 27 | 295 | 3.62e-43 | 152 |
MS.gene57129.t1 | AT2G41480 | 36.331 | 278 | 159 | 8 | 34 | 304 | 33 | 299 | 4.63e-43 | 152 |
MS.gene57129.t1 | AT4G26010 | 31.579 | 304 | 191 | 8 | 10 | 312 | 4 | 291 | 2.24e-42 | 150 |
MS.gene57129.t1 | AT4G26010 | 31.579 | 304 | 191 | 8 | 10 | 312 | 32 | 319 | 4.39e-42 | 150 |
MS.gene57129.t1 | AT5G64100 | 34.733 | 262 | 158 | 7 | 32 | 291 | 39 | 289 | 1.03e-38 | 141 |
MS.gene57129.t1 | AT2G43480 | 34.722 | 288 | 172 | 8 | 21 | 300 | 26 | 305 | 5.70e-38 | 139 |
MS.gene57129.t1 | AT1G77100 | 33.798 | 287 | 171 | 9 | 10 | 291 | 4 | 276 | 7.50e-38 | 138 |
MS.gene57129.t1 | AT5G24070 | 34.286 | 280 | 168 | 7 | 29 | 300 | 34 | 305 | 1.29e-37 | 138 |
MS.gene57129.t1 | AT2G35380 | 36.866 | 217 | 120 | 6 | 107 | 314 | 17 | 225 | 3.24e-34 | 127 |
MS.gene57129.t1 | AT2G24800 | 39.412 | 170 | 97 | 3 | 28 | 197 | 29 | 192 | 6.90e-33 | 123 |
MS.gene57129.t1 | AT4G25980 | 35.678 | 199 | 114 | 6 | 2 | 199 | 49 | 234 | 8.93e-29 | 113 |
MS.gene57129.t1 | AT5G39580 | 35.533 | 197 | 118 | 5 | 10 | 206 | 7 | 194 | 5.90e-27 | 107 |
MS.gene57129.t1 | AT4G32320 | 27.007 | 274 | 130 | 8 | 40 | 303 | 99 | 312 | 5.56e-16 | 78.6 |
MS.gene57129.t1 | AT3G42570 | 41.935 | 93 | 53 | 1 | 108 | 199 | 57 | 149 | 1.11e-15 | 73.9 |
MS.gene57129.t1 | AT4G08390 | 29.348 | 184 | 101 | 4 | 125 | 300 | 185 | 347 | 2.80e-13 | 70.9 |
MS.gene57129.t1 | AT4G08390 | 29.348 | 184 | 101 | 4 | 125 | 300 | 186 | 348 | 3.00e-13 | 70.5 |
MS.gene57129.t1 | AT4G08390 | 29.348 | 184 | 101 | 4 | 125 | 300 | 186 | 348 | 3.00e-13 | 70.5 |
MS.gene57129.t1 | AT4G08390 | 29.348 | 184 | 101 | 4 | 125 | 300 | 186 | 348 | 3.00e-13 | 70.5 |
Find 83 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATCAAGATTATTTCTTTA+AGG | 0.143575 | 6.2:+4037211 | MS.gene57129:CDS |
CAGAATTTACCTAAAGGTTT+AGG | 0.165196 | 6.2:+4037119 | MS.gene57129:CDS |
TAAACATTATCAAACTTATT+TGG | 0.189105 | 6.2:-4037092 | None:intergenic |
AGAATTTACCTAAAGGTTTA+GGG | 0.281875 | 6.2:+4037120 | MS.gene57129:CDS |
TTTAACCCTTCAACAAATCT+TGG | 0.291351 | 6.2:-4037008 | None:intergenic |
TACAACAATTCTTCTGGTTC+CGG | 0.318084 | 6.2:+4036972 | MS.gene57129:CDS |
GATATTTACAACAATTCTTC+TGG | 0.318776 | 6.2:+4036966 | MS.gene57129:CDS |
TTCAAAACCCCTAAACCTTT+AGG | 0.320573 | 6.2:-4037128 | None:intergenic |
TGTTTGTTTGTAGTAATCTA+AGG | 0.321314 | 6.2:-4036424 | None:intergenic |
AGTTTCAATATTCGCGAAAC+GGG | 0.324305 | 6.2:+4036866 | MS.gene57129:CDS |
CACGTTCAGCTTTGTTGAAA+GGG | 0.328180 | 6.2:-4036593 | None:intergenic |
GAAGAAATGGTTGCTTTATC+TGG | 0.336697 | 6.2:+4036900 | MS.gene57129:CDS |
GACATCAACCTCTCTCTTCC+AGG | 0.344076 | 6.2:+4036621 | MS.gene57129:CDS |
AATTCTTCTGGTTCCGGTTC+AGG | 0.352885 | 6.2:+4036978 | MS.gene57129:CDS |
GTCATTGTCATTGACGGCTT+TGG | 0.370495 | 6.2:-4036837 | None:intergenic |
ACGGAGAGTGGCGGCGGCGG+TGG | 0.370801 | 6.2:-4036508 | None:intergenic |
AGTTAGTGAGTGATCTGATT+TGG | 0.374068 | 6.2:+4037654 | MS.gene57129:CDS |
CGGCGGCGGTGGTTGGAGAT+TGG | 0.376609 | 6.2:-4036497 | None:intergenic |
ATCTGTGTCATTGTCATTGA+CGG | 0.409866 | 6.2:-4036843 | None:intergenic |
TCTTGGATTATAACCTGAAC+CGG | 0.418010 | 6.2:-4036991 | None:intergenic |
GAGACGGAGAGTGGCGGCGG+CGG | 0.421113 | 6.2:-4036511 | None:intergenic |
AGAGTGGCGGCGGCGGTGGT+TGG | 0.426793 | 6.2:-4036504 | None:intergenic |
GAAGAGACGGAGAGTGGCGG+CGG | 0.442594 | 6.2:-4036514 | None:intergenic |
TTATCTGGTGCTCATACAGT+TGG | 0.446715 | 6.2:+4036915 | MS.gene57129:CDS |
TCCACAAAAGGTTTAGTTGA+AGG | 0.448447 | 6.2:-4037176 | None:intergenic |
TCACGTTCAGCTTTGTTGAA+AGG | 0.455448 | 6.2:-4036594 | None:intergenic |
ACAGAGGCGTCGCAGCCGTT+AGG | 0.456431 | 6.2:-4036555 | None:intergenic |
CAGAGGCGTCGCAGCCGTTA+GGG | 0.470444 | 6.2:-4036554 | None:intergenic |
CGTGATCTTCTTATCATGCT+TGG | 0.474261 | 6.2:+4036738 | MS.gene57129:CDS |
TTAGCAAATCTATCCACAAA+AGG | 0.474475 | 6.2:-4037188 | None:intergenic |
GCAAGAGACAGTGTTGGGAC+AGG | 0.474541 | 6.2:-4036691 | None:intergenic |
CTCGGCCGTCGCGACGGCCG+AGG | 0.479098 | 6.2:+4036783 | MS.gene57129:CDS |
TGTTGAAAGGGGTTGAAGAG+AGG | 0.484577 | 6.2:-4036581 | None:intergenic |
TTGATTTGAGGTGGATTTCG+AGG | 0.493439 | 6.2:+4037499 | MS.gene57129:intron |
CGTCGCAGCCGTTAGGGAGG+AGG | 0.494004 | 6.2:-4036548 | None:intergenic |
TCTGTGTCATCTGCCGTTGA+CGG | 0.502316 | 6.2:+4036807 | MS.gene57129:CDS |
CCACAAAAGGTTTAGTTGAA+GGG | 0.502538 | 6.2:-4037175 | None:intergenic |
TATAATCCAAGATTTGTTGA+AGG | 0.505931 | 6.2:+4037002 | MS.gene57129:CDS |
CTCGGCCGTCGCGACGGCCG+AGG | 0.508766 | 6.2:-4036782 | None:intergenic |
TGAATGATTTGTTCGAATTG+TGG | 0.511315 | 6.2:-4036450 | None:intergenic |
TAGTTTCAATATTCGCGAAA+CGG | 0.511725 | 6.2:+4036865 | MS.gene57129:CDS |
TCAGAGCAAGAGACAGTGTT+GGG | 0.512165 | 6.2:-4036696 | None:intergenic |
GTTTACCTCGGCCGTCGCGA+CGG | 0.515832 | 6.2:+4036777 | MS.gene57129:CDS |
ATGAGGTCAAAGGAGTCTCC+TGG | 0.515886 | 6.2:-4036639 | None:intergenic |
TGATTTGAGGTGGATTTCGA+GGG | 0.522133 | 6.2:+4037500 | MS.gene57129:intron |
TTGAGGTGGATTTCGAGGGA+TGG | 0.524012 | 6.2:+4037504 | MS.gene57129:intron |
TGGTGGAGGACTGTGGTGCT+AGG | 0.529196 | 6.2:+4037543 | MS.gene57129:CDS |
GGCAATCGTGGAGGAAGAGA+CGG | 0.531026 | 6.2:-4036527 | None:intergenic |
ATAATCCAAGATTTGTTGAA+GGG | 0.533288 | 6.2:+4037003 | MS.gene57129:CDS |
TGAAAGGGGTTGAAGAGAGG+AGG | 0.534695 | 6.2:-4036578 | None:intergenic |
CATGTTGCTAGGTCTCTTGA+AGG | 0.539886 | 6.2:+4037601 | MS.gene57129:CDS |
GATCTTCTTATCATGCTTGG+TGG | 0.554628 | 6.2:+4036741 | MS.gene57129:CDS |
TAAAGCAACCATTTCTTCAA+CGG | 0.563878 | 6.2:-4036895 | None:intergenic |
AGGCGTCGCAGCCGTTAGGG+AGG | 0.564118 | 6.2:-4036551 | None:intergenic |
ACGTTCAGCTTTGTTGAAAG+GGG | 0.574965 | 6.2:-4036592 | None:intergenic |
GAAAGTAGAGAGCATGGTGG+AGG | 0.578562 | 6.2:+4037529 | MS.gene57129:CDS |
CACGATTGCCTCCTCCCTAA+CGG | 0.580686 | 6.2:+4036540 | MS.gene57129:CDS |
GATACGTACGATGAGGTCAA+AGG | 0.582070 | 6.2:-4036649 | None:intergenic |
CAGAACCTCGGCCGTCGCGA+CGG | 0.583750 | 6.2:-4036788 | None:intergenic |
TTGAAGGATAGTGTATCTGC+AGG | 0.585282 | 6.2:+4037617 | MS.gene57129:CDS |
CTCCGACGGACCATGTTGCT+AGG | 0.586404 | 6.2:+4037590 | MS.gene57129:CDS |
GACCTAGCAACATGGTCCGT+CGG | 0.591440 | 6.2:-4037592 | None:intergenic |
CCTCATTACAATGTTTACCT+CGG | 0.591829 | 6.2:+4036765 | MS.gene57129:CDS |
CTTCAAGAGACCTAGCAACA+TGG | 0.611488 | 6.2:-4037600 | None:intergenic |
GAATTTACCTAAAGGTTTAG+GGG | 0.612906 | 6.2:+4037121 | MS.gene57129:CDS |
GTCAGAGCAAGAGACAGTGT+TGG | 0.614569 | 6.2:-4036697 | None:intergenic |
CTTTGGAAGAAAGCCGTCAA+CGG | 0.615992 | 6.2:-4036820 | None:intergenic |
AGGAGTCTCCTGGAAGAGAG+AGG | 0.623254 | 6.2:-4036629 | None:intergenic |
CGTTAGGGAGGAGGCAATCG+TGG | 0.624552 | 6.2:-4036539 | None:intergenic |
GTTTCAATATTCGCGAAACG+GGG | 0.630647 | 6.2:+4036867 | MS.gene57129:CDS |
GAGGAAGAGACGGAGAGTGG+CGG | 0.632804 | 6.2:-4036517 | None:intergenic |
ATGGTCGAAAGTAGAGAGCA+TGG | 0.633817 | 6.2:+4037523 | MS.gene57129:CDS |
CGGCAGATGACACAGAACCT+CGG | 0.640173 | 6.2:-4036800 | None:intergenic |
GATCACGTGTAGCTGTAGCA+AGG | 0.646540 | 6.2:-4036722 | None:intergenic |
CCGAGGTAAACATTGTAATG+AGG | 0.647436 | 6.2:-4036765 | None:intergenic |
GGGACAGGAGAGTTCAAGAG+CGG | 0.649529 | 6.2:-4036676 | None:intergenic |
GGTTGAAGAGAGGAGGACAG+AGG | 0.652406 | 6.2:-4036571 | None:intergenic |
TGAATCTGCAAACACTCCGA+CGG | 0.664896 | 6.2:+4037576 | MS.gene57129:CDS |
GTGGAGGAAGAGACGGAGAG+TGG | 0.675907 | 6.2:-4036520 | None:intergenic |
TAGGGAGGAGGCAATCGTGG+AGG | 0.693205 | 6.2:-4036536 | None:intergenic |
GAGAGCATGGTGGAGGACTG+TGG | 0.713692 | 6.2:+4037536 | MS.gene57129:CDS |
GAAGGGTTAAAGAAAGCTTG+TGG | 0.742356 | 6.2:+4037020 | MS.gene57129:CDS |
GTCGAAAGTAGAGAGCATGG+TGG | 0.784658 | 6.2:+4037526 | MS.gene57129:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTATATATATAAAAAA+AGG | - | chr6.2:4037438-4037457 | None:intergenic | 0.0% |
!! | TAAACATTATCAAACTTATT+TGG | - | chr6.2:4037095-4037114 | None:intergenic | 15.0% |
!!! | AATGTAAACTTTCTTTTAAT+TGG | + | chr6.2:4037411-4037430 | MS.gene57129:intron | 15.0% |
!!! | ATAATTGTAATTTTTGTTTC+TGG | + | chr6.2:4037372-4037391 | MS.gene57129:intron | 15.0% |
!!! | TAATTGTAATTTTTGTTTCT+GGG | + | chr6.2:4037373-4037392 | MS.gene57129:intron | 15.0% |
!!! | GATTTATGATTATTGATTTG+AGG | + | chr6.2:4037487-4037506 | MS.gene57129:intron | 20.0% |
!!! | TATTTTCAGAATTTACCTAA+AGG | + | chr6.2:4037113-4037132 | MS.gene57129:CDS | 20.0% |
! | AGAATTTACCTAAAGGTTTA+GGG | + | chr6.2:4037120-4037139 | MS.gene57129:CDS | 25.0% |
! | GATATTTACAACAATTCTTC+TGG | + | chr6.2:4036966-4036985 | MS.gene57129:CDS | 25.0% |
! | TCATTAAAAACAGACAAAGT+TGG | - | chr6.2:4037062-4037081 | None:intergenic | 25.0% |
! | TGTTTGTTTGTAGTAATCTA+AGG | - | chr6.2:4036427-4036446 | None:intergenic | 25.0% |
!! | GGATCAAGATTATTTCTTTA+AGG | + | chr6.2:4037211-4037230 | MS.gene57129:CDS | 25.0% |
!!! | ATAATCCAAGATTTGTTGAA+GGG | + | chr6.2:4037003-4037022 | MS.gene57129:CDS | 25.0% |
!!! | ATCTAAGGTTAGTTTTGATT+CGG | - | chr6.2:4036412-4036431 | None:intergenic | 25.0% |
!!! | TATAATCCAAGATTTGTTGA+AGG | + | chr6.2:4037002-4037021 | MS.gene57129:CDS | 25.0% |
!!! | TTATGATTATTGATTTGAGG+TGG | + | chr6.2:4037490-4037509 | MS.gene57129:intron | 25.0% |
CAGAATTTACCTAAAGGTTT+AGG | + | chr6.2:4037119-4037138 | MS.gene57129:CDS | 30.0% | |
GAATTTACCTAAAGGTTTAG+GGG | + | chr6.2:4037121-4037140 | MS.gene57129:CDS | 30.0% | |
TAAAGCAACCATTTCTTCAA+CGG | - | chr6.2:4036898-4036917 | None:intergenic | 30.0% | |
TAGTTTCAATATTCGCGAAA+CGG | + | chr6.2:4036865-4036884 | MS.gene57129:CDS | 30.0% | |
TTAGCAAATCTATCCACAAA+AGG | - | chr6.2:4037191-4037210 | None:intergenic | 30.0% | |
TTGATCTTTGTTCTTGTTCT+TGG | + | chr6.2:4037322-4037341 | MS.gene57129:intron | 30.0% | |
TTTAACCCTTCAACAAATCT+TGG | - | chr6.2:4037011-4037030 | None:intergenic | 30.0% | |
! | AGTCTTTTGAATGTTCAAAC+TGG | + | chr6.2:4037260-4037279 | MS.gene57129:intron | 30.0% |
! | TTTTGAATGTTCAAACTGGT+AGG | + | chr6.2:4037264-4037283 | MS.gene57129:intron | 30.0% |
!! | TGAATGATTTGTTCGAATTG+TGG | - | chr6.2:4036453-4036472 | None:intergenic | 30.0% |
!!! | TTTTGTGGATAGATTTGCTA+AGG | + | chr6.2:4037190-4037209 | MS.gene57129:CDS | 30.0% |
AATGTTCAAACTGGTAGGAA+GGG | + | chr6.2:4037269-4037288 | MS.gene57129:intron | 35.0% | |
AGTTAGTGAGTGATCTGATT+TGG | + | chr6.2:4037654-4037673 | MS.gene57129:CDS | 35.0% | |
AGTTTCAATATTCGCGAAAC+GGG | + | chr6.2:4036866-4036885 | MS.gene57129:CDS | 35.0% | |
CCACAAAAGGTTTAGTTGAA+GGG | - | chr6.2:4037178-4037197 | None:intergenic | 35.0% | |
CCTCATTACAATGTTTACCT+CGG | + | chr6.2:4036765-4036784 | MS.gene57129:CDS | 35.0% | |
GATTAGAAGAAGATGTGATC+AGG | + | chr6.2:4037295-4037314 | MS.gene57129:intron | 35.0% | |
TCCACAAAAGGTTTAGTTGA+AGG | - | chr6.2:4037179-4037198 | None:intergenic | 35.0% | |
TCTTGGATTATAACCTGAAC+CGG | - | chr6.2:4036994-4037013 | None:intergenic | 35.0% | |
TTCAAAACCCCTAAACCTTT+AGG | - | chr6.2:4037131-4037150 | None:intergenic | 35.0% | |
! | ATCTGTGTCATTGTCATTGA+CGG | - | chr6.2:4036846-4036865 | None:intergenic | 35.0% |
! | GAAGAAATGGTTGCTTTATC+TGG | + | chr6.2:4036900-4036919 | MS.gene57129:CDS | 35.0% |
!! | TACAACAATTCTTCTGGTTC+CGG | + | chr6.2:4036972-4036991 | MS.gene57129:CDS | 35.0% |
!! | TTGTTCTTGGTGTTGTTCTT+GGG | + | chr6.2:4037335-4037354 | MS.gene57129:intron | 35.0% |
!!! | GGGTTTTGAAATCAGATCAT+GGG | + | chr6.2:4037141-4037160 | MS.gene57129:CDS | 35.0% |
CCGAGGTAAACATTGTAATG+AGG | - | chr6.2:4036768-4036787 | None:intergenic | 40.0% | |
CGTGATCTTCTTATCATGCT+TGG | + | chr6.2:4036738-4036757 | MS.gene57129:CDS | 40.0% | |
GAAGGGTTAAAGAAAGCTTG+TGG | + | chr6.2:4037020-4037039 | MS.gene57129:CDS | 40.0% | |
GAATGTTCAAACTGGTAGGA+AGG | + | chr6.2:4037268-4037287 | MS.gene57129:intron | 40.0% | |
GATCTTCTTATCATGCTTGG+TGG | + | chr6.2:4036741-4036760 | MS.gene57129:CDS | 40.0% | |
GTTTCAATATTCGCGAAACG+GGG | + | chr6.2:4036867-4036886 | MS.gene57129:CDS | 40.0% | |
TTATCTGGTGCTCATACAGT+TGG | + | chr6.2:4036915-4036934 | MS.gene57129:CDS | 40.0% | |
TTGAAGGATAGTGTATCTGC+AGG | + | chr6.2:4037617-4037636 | MS.gene57129:CDS | 40.0% | |
! | CCCTTCAACTAAACCTTTTG+TGG | + | chr6.2:4037175-4037194 | MS.gene57129:CDS | 40.0% |
! | GGGTTTTACCGTTGAAGAAA+TGG | + | chr6.2:4036887-4036906 | MS.gene57129:CDS | 40.0% |
! | TGATTTGAGGTGGATTTCGA+GGG | + | chr6.2:4037500-4037519 | MS.gene57129:intron | 40.0% |
! | TGGAGATTGGATCTGTTTTG+AGG | - | chr6.2:4036487-4036506 | None:intergenic | 40.0% |
! | TTGATTTGAGGTGGATTTCG+AGG | + | chr6.2:4037499-4037518 | MS.gene57129:intron | 40.0% |
!! | ACGTTCAGCTTTGTTGAAAG+GGG | - | chr6.2:4036595-4036614 | None:intergenic | 40.0% |
!! | CACGTTCAGCTTTGTTGAAA+GGG | - | chr6.2:4036596-4036615 | None:intergenic | 40.0% |
!! | CTTGTTCTTGGTGTTGTTCT+TGG | + | chr6.2:4037334-4037353 | MS.gene57129:intron | 40.0% |
!! | TCACGTTCAGCTTTGTTGAA+AGG | - | chr6.2:4036597-4036616 | None:intergenic | 40.0% |
!! | TGTTCTTGGTGTTGTTCTTG+GGG | + | chr6.2:4037336-4037355 | MS.gene57129:intron | 40.0% |
!!! | AGGTTAGTTTTGATTCGGAG+AGG | - | chr6.2:4036407-4036426 | None:intergenic | 40.0% |
!!! | GGGGTTTTGAAATCAGATCA+TGG | + | chr6.2:4037140-4037159 | MS.gene57129:CDS | 40.0% |
!!! | GTTTTGATTCGGAGAGGTTA+AGG | - | chr6.2:4036401-4036420 | None:intergenic | 40.0% |
ATGGTCGAAAGTAGAGAGCA+TGG | + | chr6.2:4037523-4037542 | MS.gene57129:CDS | 45.0% | |
CATGTTGCTAGGTCTCTTGA+AGG | + | chr6.2:4037601-4037620 | MS.gene57129:CDS | 45.0% | |
CTTCAAGAGACCTAGCAACA+TGG | - | chr6.2:4037603-4037622 | None:intergenic | 45.0% | |
GATACGTACGATGAGGTCAA+AGG | - | chr6.2:4036652-4036671 | None:intergenic | 45.0% | |
GTCATTGTCATTGACGGCTT+TGG | - | chr6.2:4036840-4036859 | None:intergenic | 45.0% | |
TCAGAGCAAGAGACAGTGTT+GGG | - | chr6.2:4036699-4036718 | None:intergenic | 45.0% | |
TGAATCTGCAAACACTCCGA+CGG | + | chr6.2:4037576-4037595 | MS.gene57129:CDS | 45.0% | |
TGTTGAAAGGGGTTGAAGAG+AGG | - | chr6.2:4036584-4036603 | None:intergenic | 45.0% | |
! | CTTTGGAAGAAAGCCGTCAA+CGG | - | chr6.2:4036823-4036842 | None:intergenic | 45.0% |
!! | AATTCTTCTGGTTCCGGTTC+AGG | + | chr6.2:4036978-4036997 | MS.gene57129:CDS | 45.0% |
!! | CGGTTTTGATACGTACGATG+AGG | - | chr6.2:4036659-4036678 | None:intergenic | 45.0% |
!! | GTTGTTCTTGGGGTTTGTTG+TGG | + | chr6.2:4037346-4037365 | MS.gene57129:intron | 45.0% |
!!! | AAATTTTTCATATTTTTATT+AGG | + | chr6.2:4037452-4037471 | MS.gene57129:intron | 5.0% |
ATGAGGTCAAAGGAGTCTCC+TGG | - | chr6.2:4036642-4036661 | None:intergenic | 50.0% | |
GACATCAACCTCTCTCTTCC+AGG | + | chr6.2:4036621-4036640 | MS.gene57129:CDS | 50.0% | |
GATCACGTGTAGCTGTAGCA+AGG | - | chr6.2:4036725-4036744 | None:intergenic | 50.0% | |
GTCAGAGCAAGAGACAGTGT+TGG | - | chr6.2:4036700-4036719 | None:intergenic | 50.0% | |
TCTGTGTCATCTGCCGTTGA+CGG | + | chr6.2:4036807-4036826 | MS.gene57129:CDS | 50.0% | |
TGAAAGGGGTTGAAGAGAGG+AGG | - | chr6.2:4036581-4036600 | None:intergenic | 50.0% | |
! | GAAAGTAGAGAGCATGGTGG+AGG | + | chr6.2:4037529-4037548 | MS.gene57129:CDS | 50.0% |
! | GTCGAAAGTAGAGAGCATGG+TGG | + | chr6.2:4037526-4037545 | MS.gene57129:CDS | 50.0% |
! | TTGAGGTGGATTTCGAGGGA+TGG | + | chr6.2:4037504-4037523 | MS.gene57129:intron | 50.0% |
AGGAGTCTCCTGGAAGAGAG+AGG | - | chr6.2:4036632-4036651 | None:intergenic | 55.0% | |
CACGATTGCCTCCTCCCTAA+CGG | + | chr6.2:4036540-4036559 | MS.gene57129:CDS | 55.0% | |
CGGCAGATGACACAGAACCT+CGG | - | chr6.2:4036803-4036822 | None:intergenic | 55.0% | |
GACCTAGCAACATGGTCCGT+CGG | - | chr6.2:4037595-4037614 | None:intergenic | 55.0% | |
GGCAATCGTGGAGGAAGAGA+CGG | - | chr6.2:4036530-4036549 | None:intergenic | 55.0% | |
GGGACAGGAGAGTTCAAGAG+CGG | - | chr6.2:4036679-4036698 | None:intergenic | 55.0% | |
GGTTGAAGAGAGGAGGACAG+AGG | - | chr6.2:4036574-4036593 | None:intergenic | 55.0% | |
! | GCAAGAGACAGTGTTGGGAC+AGG | - | chr6.2:4036694-4036713 | None:intergenic | 55.0% |
CGTTAGGGAGGAGGCAATCG+TGG | - | chr6.2:4036542-4036561 | None:intergenic | 60.0% | |
CTCCGACGGACCATGTTGCT+AGG | + | chr6.2:4037590-4037609 | MS.gene57129:CDS | 60.0% | |
GAGGAAGAGACGGAGAGTGG+CGG | - | chr6.2:4036520-4036539 | None:intergenic | 60.0% | |
GTGGAGGAAGAGACGGAGAG+TGG | - | chr6.2:4036523-4036542 | None:intergenic | 60.0% | |
TAGGGAGGAGGCAATCGTGG+AGG | - | chr6.2:4036539-4036558 | None:intergenic | 60.0% | |
TGGTGGAGGACTGTGGTGCT+AGG | + | chr6.2:4037543-4037562 | MS.gene57129:CDS | 60.0% | |
! | GAGAGCATGGTGGAGGACTG+TGG | + | chr6.2:4037536-4037555 | MS.gene57129:CDS | 60.0% |
GAAGAGACGGAGAGTGGCGG+CGG | - | chr6.2:4036517-4036536 | None:intergenic | 65.0% | |
GTTTACCTCGGCCGTCGCGA+CGG | + | chr6.2:4036777-4036796 | MS.gene57129:CDS | 65.0% | |
!! | ACAGAGGCGTCGCAGCCGTT+AGG | - | chr6.2:4036558-4036577 | None:intergenic | 65.0% |
!! | CAGAGGCGTCGCAGCCGTTA+GGG | - | chr6.2:4036557-4036576 | None:intergenic | 65.0% |
CAGAACCTCGGCCGTCGCGA+CGG | - | chr6.2:4036791-4036810 | None:intergenic | 70.0% | |
CGGCGGCGGTGGTTGGAGAT+TGG | - | chr6.2:4036500-4036519 | None:intergenic | 70.0% | |
CGTCGCAGCCGTTAGGGAGG+AGG | - | chr6.2:4036551-4036570 | None:intergenic | 70.0% | |
! | AGGCGTCGCAGCCGTTAGGG+AGG | - | chr6.2:4036554-4036573 | None:intergenic | 70.0% |
AGAGTGGCGGCGGCGGTGGT+TGG | - | chr6.2:4036507-4036526 | None:intergenic | 75.0% | |
GAGACGGAGAGTGGCGGCGG+CGG | - | chr6.2:4036514-4036533 | None:intergenic | 75.0% | |
! | ACGGAGAGTGGCGGCGGCGG+TGG | - | chr6.2:4036511-4036530 | None:intergenic | 80.0% |
! | CTCGGCCGTCGCGACGGCCG+AGG | + | chr6.2:4036783-4036802 | MS.gene57129:CDS | 85.0% |
! | CTCGGCCGTCGCGACGGCCG+AGG | - | chr6.2:4036802-4036783 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 4036333 | 4037694 | 4036333 | ID=MS.gene57129 |
chr6.2 | mRNA | 4036333 | 4037694 | 4036333 | ID=MS.gene57129.t1;Parent=MS.gene57129 |
chr6.2 | exon | 4036333 | 4037232 | 4036333 | ID=MS.gene57129.t1.exon1;Parent=MS.gene57129.t1 |
chr6.2 | CDS | 4036333 | 4037232 | 4036333 | ID=cds.MS.gene57129.t1;Parent=MS.gene57129.t1 |
chr6.2 | exon | 4037509 | 4037694 | 4037509 | ID=MS.gene57129.t1.exon2;Parent=MS.gene57129.t1 |
chr6.2 | CDS | 4037509 | 4037694 | 4037509 | ID=cds.MS.gene57129.t1;Parent=MS.gene57129.t1 |
Gene Sequence |
Protein sequence |