Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013110.t1 | KEH35718.1 | 94.3 | 527 | 26 | 1 | 1 | 523 | 1 | 527 | 8.70E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013110.t1 | Q3E911 | 54.4 | 465 | 205 | 3 | 48 | 508 | 30 | 491 | 1.0e-141 | 505.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013110.t1 | A0A072V2Y1 | 94.3 | 527 | 26 | 1 | 1 | 523 | 1 | 527 | 6.3e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39993 | MS.gene013110 | PPI |
| MS.gene036227 | MS.gene013110 | PPI |
| MS.gene013110 | MS.gene20884 | PPI |
| MS.gene068116 | MS.gene013110 | PPI |
| MS.gene013110 | MS.gene008871 | PPI |
| MS.gene013110 | MS.gene07338 | PPI |
| MS.gene013110 | MS.gene067932 | PPI |
| MS.gene013110 | MS.gene068115 | PPI |
| MS.gene013110 | MS.gene005487 | PPI |
| MS.gene013110 | MS.gene008872 | PPI |
| MS.gene013110 | MS.gene32053 | PPI |
| MS.gene013110 | MS.gene008863 | PPI |
| MS.gene013110 | MS.gene056432 | PPI |
| MS.gene013110 | MS.gene067938 | PPI |
| MS.gene013110 | MS.gene068108 | PPI |
| MS.gene004676 | MS.gene013110 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013110.t1 | MTR_3g099753 | 94.118 | 527 | 27 | 1 | 1 | 523 | 1 | 527 | 0.0 | 1011 |
| MS.gene013110.t1 | MTR_3g099753 | 93.117 | 523 | 16 | 1 | 1 | 523 | 1 | 503 | 0.0 | 1000 |
| MS.gene013110.t1 | MTR_1g072300 | 31.337 | 501 | 328 | 8 | 28 | 518 | 2 | 496 | 2.17e-75 | 247 |
| MS.gene013110.t1 | MTR_8g007375 | 28.536 | 403 | 276 | 4 | 119 | 518 | 6 | 399 | 9.88e-63 | 211 |
| MS.gene013110.t1 | MTR_8g059115 | 32.051 | 390 | 261 | 3 | 123 | 511 | 9 | 395 | 1.99e-61 | 207 |
| MS.gene013110.t1 | MTR_2g013450 | 28.247 | 485 | 340 | 4 | 40 | 519 | 7 | 488 | 1.48e-60 | 207 |
| MS.gene013110.t1 | MTR_8g465890 | 28.894 | 443 | 291 | 9 | 75 | 506 | 45 | 474 | 6.63e-59 | 203 |
| MS.gene013110.t1 | MTR_8g069570 | 29.442 | 394 | 273 | 3 | 77 | 468 | 43 | 433 | 2.44e-57 | 199 |
| MS.gene013110.t1 | MTR_2g047855 | 28.571 | 448 | 294 | 10 | 28 | 466 | 7 | 437 | 5.74e-56 | 195 |
| MS.gene013110.t1 | MTR_1g022400 | 31.627 | 332 | 223 | 3 | 76 | 405 | 73 | 402 | 6.12e-56 | 192 |
| MS.gene013110.t1 | MTR_2g090290 | 29.929 | 421 | 282 | 5 | 74 | 486 | 49 | 464 | 2.82e-52 | 185 |
| MS.gene013110.t1 | MTR_1g086820 | 28.606 | 416 | 282 | 7 | 56 | 466 | 30 | 435 | 1.11e-51 | 183 |
| MS.gene013110.t1 | MTR_8g031520 | 31.844 | 179 | 119 | 2 | 76 | 253 | 123 | 299 | 3.98e-29 | 117 |
| MS.gene013110.t1 | MTR_7g089770 | 23.974 | 463 | 323 | 10 | 54 | 508 | 156 | 597 | 4.72e-27 | 115 |
| MS.gene013110.t1 | MTR_1g050750 | 24.545 | 440 | 308 | 11 | 76 | 508 | 109 | 531 | 8.15e-25 | 108 |
| MS.gene013110.t1 | MTR_2g096880 | 20.682 | 469 | 362 | 6 | 57 | 519 | 41 | 505 | 2.73e-20 | 94.4 |
| MS.gene013110.t1 | MTR_8g031510 | 26.590 | 173 | 117 | 3 | 349 | 518 | 1 | 166 | 6.89e-15 | 73.2 |
| MS.gene013110.t1 | MTR_8g054410 | 24.176 | 273 | 202 | 3 | 160 | 431 | 214 | 482 | 4.46e-13 | 72.4 |
| MS.gene013110.t1 | MTR_1g048080 | 23.891 | 293 | 198 | 6 | 65 | 355 | 578 | 847 | 2.04e-12 | 70.5 |
| MS.gene013110.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 55 | 381 | 5.86e-11 | 65.5 |
| MS.gene013110.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 96 | 422 | 6.25e-11 | 65.5 |
| MS.gene013110.t1 | MTR_7g091410 | 23.373 | 338 | 234 | 11 | 99 | 422 | 161 | 487 | 6.36e-11 | 65.5 |
| MS.gene013110.t1 | MTR_8g039270 | 22.393 | 326 | 241 | 5 | 164 | 487 | 171 | 486 | 6.50e-11 | 65.5 |
| MS.gene013110.t1 | MTR_6g079920 | 21.930 | 342 | 250 | 9 | 95 | 430 | 231 | 561 | 7.08e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013110.t1 | AT5G27460 | 53.895 | 475 | 211 | 4 | 39 | 508 | 20 | 491 | 3.83e-178 | 510 |
| MS.gene013110.t1 | AT1G02150 | 34.375 | 384 | 246 | 3 | 76 | 458 | 86 | 464 | 8.97e-80 | 259 |
| MS.gene013110.t1 | AT4G02820 | 30.802 | 474 | 322 | 4 | 46 | 519 | 50 | 517 | 3.49e-77 | 252 |
| MS.gene013110.t1 | AT4G21705 | 29.065 | 492 | 338 | 4 | 29 | 518 | 4 | 486 | 8.23e-69 | 229 |
| MS.gene013110.t1 | AT1G02370 | 28.667 | 450 | 309 | 5 | 76 | 519 | 90 | 533 | 2.46e-65 | 221 |
| MS.gene013110.t1 | AT2G20710 | 29.730 | 444 | 307 | 4 | 20 | 462 | 1 | 440 | 3.81e-64 | 217 |
| MS.gene013110.t1 | AT1G60770 | 31.738 | 397 | 264 | 4 | 126 | 518 | 91 | 484 | 6.11e-61 | 208 |
| MS.gene013110.t1 | AT4G01990 | 27.865 | 445 | 313 | 4 | 76 | 518 | 59 | 497 | 6.60e-57 | 198 |
| MS.gene013110.t1 | AT5G09450 | 31.105 | 344 | 232 | 4 | 55 | 395 | 53 | 394 | 8.47e-56 | 192 |
| MS.gene013110.t1 | AT2G20710 | 30.946 | 349 | 236 | 4 | 115 | 462 | 1 | 345 | 4.13e-48 | 171 |
| MS.gene013110.t1 | AT1G28020 | 30.675 | 326 | 214 | 4 | 74 | 393 | 53 | 372 | 5.86e-43 | 160 |
| MS.gene013110.t1 | AT1G80270 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.74e-28 | 119 |
| MS.gene013110.t1 | AT1G80270 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.74e-28 | 119 |
| MS.gene013110.t1 | AT1G80270 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.74e-28 | 119 |
| MS.gene013110.t1 | AT1G80270 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.74e-28 | 119 |
| MS.gene013110.t1 | AT1G80270 | 23.570 | 437 | 313 | 10 | 76 | 506 | 147 | 568 | 2.74e-28 | 119 |
| MS.gene013110.t1 | AT1G15480 | 22.146 | 438 | 322 | 9 | 76 | 508 | 145 | 568 | 1.39e-24 | 108 |
| MS.gene013110.t1 | AT3G11380 | 27.653 | 311 | 186 | 8 | 92 | 398 | 78 | 353 | 1.72e-20 | 95.1 |
| MS.gene013110.t1 | AT3G11380 | 32.044 | 181 | 114 | 4 | 72 | 243 | 360 | 540 | 6.85e-15 | 77.8 |
| MS.gene013110.t1 | AT3G15590 | 22.917 | 432 | 322 | 6 | 76 | 506 | 160 | 581 | 2.17e-20 | 95.1 |
| MS.gene013110.t1 | AT3G15590 | 22.917 | 432 | 322 | 6 | 76 | 506 | 160 | 581 | 2.17e-20 | 95.1 |
| MS.gene013110.t1 | AT1G28000 | 26.457 | 223 | 157 | 4 | 75 | 293 | 51 | 270 | 1.58e-18 | 88.2 |
| MS.gene013110.t1 | AT1G07590 | 21.711 | 456 | 349 | 6 | 68 | 519 | 76 | 527 | 1.10e-17 | 86.7 |
| MS.gene013110.t1 | AT1G43010 | 28.638 | 213 | 142 | 3 | 74 | 285 | 53 | 256 | 1.71e-17 | 82.8 |
| MS.gene013110.t1 | AT2G31400 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 1.98e-14 | 76.6 |
| MS.gene013110.t1 | AT2G31400 | 25.000 | 268 | 197 | 3 | 160 | 426 | 270 | 534 | 2.39e-14 | 76.6 |
| MS.gene013110.t1 | AT2G32630 | 24.014 | 279 | 189 | 7 | 158 | 426 | 294 | 559 | 4.16e-12 | 69.3 |
| MS.gene013110.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.73e-12 | 68.6 |
| MS.gene013110.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 183 | 480 | 8.73e-12 | 68.6 |
| MS.gene013110.t1 | AT3G06920 | 20.968 | 310 | 229 | 7 | 159 | 464 | 169 | 466 | 1.24e-11 | 67.8 |
| MS.gene013110.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 8.93e-11 | 65.1 |
| MS.gene013110.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 8.93e-11 | 65.1 |
| MS.gene013110.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 8.93e-11 | 65.1 |
| MS.gene013110.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 8.93e-11 | 65.1 |
| MS.gene013110.t1 | AT5G02860 | 18.974 | 390 | 265 | 9 | 88 | 433 | 134 | 516 | 8.93e-11 | 65.1 |
Find 0 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGATCAATAAAGACAAAA+TGG | - | 21044:85050-85069 | MS.gene013110:CDS | 20.0% |
| !! | AGTTTCATCATTTCATTATA+AGG | + | 21044:84133-84152 | None:intergenic | 20.0% |
| !! | ATCACAGATATTCATAATTT+AGG | - | 21044:84949-84968 | MS.gene013110:CDS | 20.0% |
| !! | GTTTCATCATTTCATTATAA+GGG | + | 21044:84132-84151 | None:intergenic | 20.0% |
| !!! | CTTTATTTCGTTTTATTTGT+TGG | + | 21044:84198-84217 | None:intergenic | 20.0% |
| !!! | TGATGATGTACTTTTTATTT+TGG | - | 21044:83557-83576 | MS.gene013110:CDS | 20.0% |
| !!! | TGTCTTTATTGATCATTTTA+AGG | + | 21044:85047-85066 | None:intergenic | 20.0% |
| !!! | TTTTATTTGTTGGATAACTA+GGG | + | 21044:84188-84207 | None:intergenic | 20.0% |
| ! | AAATGATGAGAATGTTGAAA+TGG | - | 21044:84318-84337 | MS.gene013110:intron | 25.0% |
| ! | AATGATGAGAATGTTGAAAT+GGG | - | 21044:84319-84338 | MS.gene013110:intron | 25.0% |
| ! | AGTAGTAAATGAAAATGACA+AGG | - | 21044:83382-83401 | MS.gene013110:CDS | 25.0% |
| ! | GATATTCATAATTTAGGTCT+TGG | - | 21044:84955-84974 | MS.gene013110:CDS | 25.0% |
| ! | GTAGTAAATGAAAATGACAA+GGG | - | 21044:83383-83402 | MS.gene013110:CDS | 25.0% |
| ! | GTTATTGCAATGTGATTTAT+GGG | - | 21044:83789-83808 | MS.gene013110:CDS | 25.0% |
| ! | TGTTAGTATGCAAATATAGT+TGG | + | 21044:84560-84579 | None:intergenic | 25.0% |
| ! | TGTTATTGCAATGTGATTTA+TGG | - | 21044:83788-83807 | MS.gene013110:CDS | 25.0% |
| !! | TTAATTATTCTTTTGCACAC+AGG | - | 21044:83856-83875 | MS.gene013110:CDS | 25.0% |
| !! | TTTATTTGTTGGATAACTAG+GGG | + | 21044:84187-84206 | None:intergenic | 25.0% |
| !!! | AGTTCTAAAGTAGTTAATTG+TGG | - | 21044:83285-83304 | MS.gene013110:CDS | 25.0% |
| !!! | ATTTAGTTTGTTGCTTATGT+TGG | - | 21044:83487-83506 | MS.gene013110:CDS | 25.0% |
| !!! | GTTTTATTTGTTGGATAACT+AGG | + | 21044:84189-84208 | None:intergenic | 25.0% |
| !!! | TATTGATCATTTTAAGGACA+TGG | + | 21044:85041-85060 | None:intergenic | 25.0% |
| !!! | TGATGTACTTTTTATTTTGG+AGG | - | 21044:83560-83579 | MS.gene013110:CDS | 25.0% |
| !!! | TGTTTAGCTTATGCTTTTAT+AGG | - | 21044:83515-83534 | MS.gene013110:CDS | 25.0% |
| AAGATACTGTAACTGATCAT+CGG | - | 21044:83743-83762 | MS.gene013110:CDS | 30.0% | |
| AAGCTGTAATCAATCCATAA+TGG | + | 21044:83718-83737 | None:intergenic | 30.0% | |
| ACAGAAATTCAACAGAGAAA+TGG | + | 21044:83422-83441 | None:intergenic | 30.0% | |
| AGTTAATCGCTAAAAACTGT+GGG | - | 21044:83945-83964 | MS.gene013110:CDS | 30.0% | |
| ATATGTCAATTGGCAAAAGA+TGG | - | 21044:84792-84811 | MS.gene013110:CDS | 30.0% | |
| ATGGCTAATACAATTCTTTG+TGG | + | 21044:84880-84899 | None:intergenic | 30.0% | |
| ATTAGCCATAGCTGAATATT+TGG | - | 21044:84891-84910 | MS.gene013110:CDS | 30.0% | |
| ATTTCCAAAAAACCTTCAAG+CGG | + | 21044:83457-83476 | None:intergenic | 30.0% | |
| CAATAAAGACAAAATGGAGA+TGG | - | 21044:85056-85075 | MS.gene013110:CDS | 30.0% | |
| CTGAATATTTGGAGAAATGT+GGG | - | 21044:84902-84921 | MS.gene013110:CDS | 30.0% | |
| GCTATAGTGAAGTGATTATA+AGG | + | 21044:83664-83683 | None:intergenic | 30.0% | |
| TATTTGCATACTAACAAGCT+TGG | - | 21044:84564-84583 | MS.gene013110:intron | 30.0% | |
| TCATTGAAGGATATGTCAAT+TGG | - | 21044:84782-84801 | MS.gene013110:intron | 30.0% | |
| TTGTAAGACAGAACATTCAA+GGG | + | 21044:84223-84242 | None:intergenic | 30.0% | |
| TTTCTCCAAATATTCAGCTA+TGG | + | 21044:84899-84918 | None:intergenic | 30.0% | |
| ! | AGAGTCTCTAATGTTCTTTT+AGG | - | 21044:84661-84680 | MS.gene013110:intron | 30.0% |
| ! | AGCAGAATCAGTTTCTTTTT+GGG | - | 21044:82993-83012 | MS.gene013110:CDS | 30.0% |
| !! | ATCATTTTAAGGACATGGAA+AGG | + | 21044:85036-85055 | None:intergenic | 30.0% |
| !! | ATTACTAGCTTTAGCCATAT+AGG | - | 21044:83311-83330 | MS.gene013110:CDS | 30.0% |
| !! | TTACTAGCTTTAGCCATATA+GGG | - | 21044:83312-83331 | MS.gene013110:CDS | 30.0% |
| !!! | GGCATTTTTTAGAACTAGAA+TGG | + | 21044:84404-84423 | None:intergenic | 30.0% |
| ACATGTAGACAGTTTCTCTT+CGG | + | 21044:84425-84444 | None:intergenic | 35.0% | |
| AGGTAACAAGCTTTCATCAT+CGG | - | 21044:83151-83170 | MS.gene013110:CDS | 35.0% | |
| ATGAGAATGTTGAAATGGGA+TGG | - | 21044:84323-84342 | MS.gene013110:intron | 35.0% | |
| ATGTTCTGTCTTACAACCTT+TGG | - | 21044:84227-84246 | MS.gene013110:intron | 35.0% | |
| ATTGCCAGTGCTTCAAAATT+GGG | - | 21044:83121-83140 | MS.gene013110:CDS | 35.0% | |
| CAGAAGAATCTTCAGAGAAT+GGG | - | 21044:84612-84631 | MS.gene013110:intron | 35.0% | |
| CATAAACCCTAAACCCTATA+TGG | + | 21044:83328-83347 | None:intergenic | 35.0% | |
| CTTTAGCCATATAGGGTTTA+GGG | - | 21044:83319-83338 | MS.gene013110:CDS | 35.0% | |
| GAGACTGTTTCCATTCTTAA+AGG | - | 21044:85084-85103 | MS.gene013110:CDS | 35.0% | |
| GAGTTAATCGCTAAAAACTG+TGG | - | 21044:83944-83963 | MS.gene013110:CDS | 35.0% | |
| GCTAATACAATTCTTTGTGG+CGG | + | 21044:84877-84896 | None:intergenic | 35.0% | |
| GCTGAATATTTGGAGAAATG+TGG | - | 21044:84901-84920 | MS.gene013110:CDS | 35.0% | |
| GTTGTAAGACAGAACATTCA+AGG | + | 21044:84224-84243 | None:intergenic | 35.0% | |
| TATTGCCATGAAAAGAGCTT+TGG | - | 21044:84825-84844 | MS.gene013110:CDS | 35.0% | |
| TCCTGCTTTCATATACACAT+TGG | + | 21044:84368-84387 | None:intergenic | 35.0% | |
| TTACATTCCTGCAATTTGTG+TGG | - | 21044:83257-83276 | MS.gene013110:CDS | 35.0% | |
| TTTCCAAAAAACCTTCAAGC+GGG | + | 21044:83456-83475 | None:intergenic | 35.0% | |
| ! | CACTTCACTATAGCATTTTG+TGG | - | 21044:83670-83689 | MS.gene013110:CDS | 35.0% |
| ! | CAGCAGAATCAGTTTCTTTT+TGG | - | 21044:82992-83011 | MS.gene013110:CDS | 35.0% |
| ! | GGTTTATGCGGAATTTTTGT+TGG | + | 21044:83901-83920 | None:intergenic | 35.0% |
| ! | TGCGAAGAGAAGAAGTATAT+GGG | + | 21044:82974-82993 | None:intergenic | 35.0% |
| !! | ATTTTAAGGACATGGAAAGG+TGG | + | 21044:85033-85052 | None:intergenic | 35.0% |
| !! | TTCTTTTAGGAGCATATGTG+CGG | - | 21044:84674-84693 | MS.gene013110:intron | 35.0% |
| !! | TTTTGTGGATTAATCGCTTC+AGG | - | 21044:83685-83704 | MS.gene013110:CDS | 35.0% |
| AAAAACCTTCAAGCGGGAAA+AGG | + | 21044:83450-83469 | None:intergenic | 40.0% | |
| ACGTGGGAAATTCTCATTGA+AGG | - | 21044:84769-84788 | MS.gene013110:intron | 40.0% | |
| ATGGAGAAGCTCTATGAACT+GGG | - | 21044:84088-84107 | MS.gene013110:CDS | 40.0% | |
| ATTTCCCACGTCTTGTAGTT+TGG | + | 21044:84760-84779 | None:intergenic | 40.0% | |
| CAATTGGCAAAAGATGGATG+AGG | - | 21044:84798-84817 | MS.gene013110:CDS | 40.0% | |
| CATTGCCAGTGCTTCAAAAT+TGG | - | 21044:83120-83139 | MS.gene013110:CDS | 40.0% | |
| CCAGAAGAATCTTCAGAGAA+TGG | - | 21044:84611-84630 | MS.gene013110:intron | 40.0% | |
| CCATTCTTAAAGGCTTCACT+GGG | - | 21044:85094-85113 | MS.gene013110:CDS | 40.0% | |
| CTATGTTGAAAGACTGCCAT+TGG | - | 21044:84848-84867 | MS.gene013110:CDS | 40.0% | |
| CTGTCTACATGTAATCGTCT+TGG | - | 21044:84433-84452 | MS.gene013110:intron | 40.0% | |
| CTTCAAAATTGGGTCGATCA+AGG | - | 21044:83131-83150 | MS.gene013110:CDS | 40.0% | |
| GCCAATGTGTATATGAAAGC+AGG | - | 21044:84364-84383 | MS.gene013110:intron | 40.0% | |
| GCTCAATACGCTGAACTTAA+AGG | + | 21044:83613-83632 | None:intergenic | 40.0% | |
| GCTTTAGCCATATAGGGTTT+AGG | - | 21044:83318-83337 | MS.gene013110:CDS | 40.0% | |
| TCCATTCTTAAAGGCTTCAC+TGG | - | 21044:85093-85112 | MS.gene013110:CDS | 40.0% | |
| TTTGCACACAGGTATTCAAC+TGG | - | 21044:83867-83886 | MS.gene013110:CDS | 40.0% | |
| TTTGGATTTGATGAGCCTTC+TGG | + | 21044:83192-83211 | None:intergenic | 40.0% | |
| ! | ATTTTCCTTTTCCCGCTTGA+AGG | - | 21044:83442-83461 | MS.gene013110:CDS | 40.0% |
| ! | CATAGCCAAAGCTCTTTTCA+TGG | + | 21044:84833-84852 | None:intergenic | 40.0% |
| ! | CCATTCTCTGAAGATTCTTC+TGG | + | 21044:84614-84633 | None:intergenic | 40.0% |
| ! | CTGCGAAGAGAAGAAGTATA+TGG | + | 21044:82975-82994 | None:intergenic | 40.0% |
| ! | CTTCAGGCTACTTTCCATTA+TGG | - | 21044:83701-83720 | MS.gene013110:CDS | 40.0% |
| ! | GCGAAGAGAAGAAGTATATG+GGG | + | 21044:82973-82992 | None:intergenic | 40.0% |
| ! | TAACAAGCTTGGTGAAGCTT+GGG | - | 21044:84575-84594 | MS.gene013110:intron | 40.0% |
| !! | ATACGCCTCTTTGAAGCAAA+AGG | - | 21044:84477-84496 | MS.gene013110:intron | 40.0% |
| !!! | CAATTTTGAAGCACTGGCAA+TGG | + | 21044:83122-83141 | None:intergenic | 40.0% |
| !!! | TTTCCCGCTTGAAGGTTTTT+TGG | - | 21044:83450-83469 | MS.gene013110:CDS | 40.0% |
| AACTGAGATGCATCTCCAGA+AGG | - | 21044:83174-83193 | MS.gene013110:CDS | 45.0% | |
| AACTTCAGAGCATGATCAGC+TGG | + | 21044:83923-83942 | None:intergenic | 45.0% | |
| AAGGTGGTTCTTGAGCAGAA+AGG | + | 21044:85017-85036 | None:intergenic | 45.0% | |
| ACAATCACGCATTCGAGGTT+CGG | - | 21044:83216-83235 | MS.gene013110:CDS | 45.0% | |
| ACGTGGCTATGTAGGAGATA+GGG | - | 21044:84042-84061 | MS.gene013110:CDS | 45.0% | |
| ACTTCAGAGCATGATCAGCT+GGG | + | 21044:83922-83941 | None:intergenic | 45.0% | |
| CACACAGGTATTCAACTGGA+TGG | - | 21044:83871-83890 | MS.gene013110:CDS | 45.0% | |
| CAGTAAAGCTGAGACGTTCA+TGG | - | 21044:84069-84088 | MS.gene013110:CDS | 45.0% | |
| CATCACAAGCACTCATCCAA+AGG | + | 21044:84246-84265 | None:intergenic | 45.0% | |
| CATCTCCACACATTGCAGAA+GGG | - | 21044:84727-84746 | MS.gene013110:intron | 45.0% | |
| CATGAACGTCTCAGCTTTAC+TGG | + | 21044:84071-84090 | None:intergenic | 45.0% | |
| CATGATCAGCTGGGTTTATG+CGG | + | 21044:83913-83932 | None:intergenic | 45.0% | |
| CATGGAGAAGCTCTATGAAC+TGG | - | 21044:84087-84106 | MS.gene013110:CDS | 45.0% | |
| CTACATAGCCACGTAGAAGT+GGG | + | 21044:84036-84055 | None:intergenic | 45.0% | |
| CTGTCCAAACTACAAGACGT+GGG | - | 21044:84753-84772 | MS.gene013110:intron | 45.0% | |
| CTTCGAACCACACAAATTGC+AGG | + | 21044:83267-83286 | None:intergenic | 45.0% | |
| GAATGCGTGATTGTAGCGTT+TGG | + | 21044:83210-83229 | None:intergenic | 45.0% | |
| TACCTTTCGGTACTCACATG+TGG | + | 21044:84164-84183 | None:intergenic | 45.0% | |
| TACGTGGCTATGTAGGAGAT+AGG | - | 21044:84041-84060 | MS.gene013110:CDS | 45.0% | |
| TGGAGAAGCTCTATGAACTG+GGG | - | 21044:84089-84108 | MS.gene013110:CDS | 45.0% | |
| TGGATGAGTGCTTGTGATGA+GGG | - | 21044:84247-84266 | MS.gene013110:intron | 45.0% | |
| TGTTGAAAGACTGCCATTGG+AGG | - | 21044:84851-84870 | MS.gene013110:CDS | 45.0% | |
| TTGGATGAGTGCTTGTGATG+AGG | - | 21044:84246-84265 | MS.gene013110:intron | 45.0% | |
| ! | AACAAGCTTGGTGAAGCTTG+GGG | - | 21044:84576-84595 | MS.gene013110:intron | 45.0% |
| ! | CCCAGTGAAGCCTTTAAGAA+TGG | + | 21044:85097-85116 | None:intergenic | 45.0% |
| ! | CGCTAAAAACTGTGGGCTAA+TGG | - | 21044:83952-83971 | MS.gene013110:CDS | 45.0% |
| ! | CTAACAAGCTTGGTGAAGCT+TGG | - | 21044:84574-84593 | MS.gene013110:intron | 45.0% |
| ! | TCCCTCCTTTTGCTTCAAAG+AGG | + | 21044:84485-84504 | None:intergenic | 45.0% |
| ! | TTAGGAGCATATGTGCGGAA+TGG | - | 21044:84679-84698 | MS.gene013110:intron | 45.0% |
| !! | AGCTGATCATGCTCTGAAGT+TGG | - | 21044:83922-83941 | MS.gene013110:CDS | 45.0% |
| !! | GCCTCTTTGAAGCAAAAGGA+GGG | - | 21044:84481-84500 | MS.gene013110:intron | 45.0% |
| !! | GGATAACTAGGGGTACCTTT+CGG | + | 21044:84177-84196 | None:intergenic | 45.0% |
| !!! | TCGACCCAATTTTGAAGCAC+TGG | + | 21044:83128-83147 | None:intergenic | 45.0% |
| ACGCTACAATCACGCATTCG+AGG | - | 21044:83211-83230 | MS.gene013110:CDS | 50.0% | |
| ACGTAGAAGTGGGAGATAGG+CGG | + | 21044:84026-84045 | None:intergenic | 50.0% | |
| AGCAAAAGGAGGGAGTCTTG+CGG | - | 21044:84491-84510 | MS.gene013110:intron | 50.0% | |
| ATGCGTATACCTGACTCAGC+TGG | - | 21044:83992-84011 | MS.gene013110:CDS | 50.0% | |
| CCACTTCTACGTGGCTATGT+AGG | - | 21044:84034-84053 | MS.gene013110:CDS | 50.0% | |
| CCTACATAGCCACGTAGAAG+TGG | + | 21044:84037-84056 | None:intergenic | 50.0% | |
| GCATCTCCACACATTGCAGA+AGG | - | 21044:84726-84745 | MS.gene013110:intron | 50.0% | |
| GCTGTCCAAACTACAAGACG+TGG | - | 21044:84752-84771 | MS.gene013110:intron | 50.0% | |
| GCTTTCTTTCCAGCTGAGTC+AGG | + | 21044:84004-84023 | None:intergenic | 50.0% | |
| GGCAATGGAGTTTGCGTTGA+AGG | + | 21044:83107-83126 | None:intergenic | 50.0% | |
| GTGATGAGGGAGAGCGATAT+GGG | - | 21044:84260-84279 | MS.gene013110:intron | 50.0% | |
| TCTTCCACCAACTGCCTTAC+TGG | + | 21044:84527-84546 | None:intergenic | 50.0% | |
| TGATGAGGGAGAGCGATATG+GGG | - | 21044:84261-84280 | MS.gene013110:intron | 50.0% | |
| TGTGATGAGGGAGAGCGATA+TGG | - | 21044:84259-84278 | MS.gene013110:intron | 50.0% | |
| !! | CGCCTCTTTGAAGCAAAAGG+AGG | - | 21044:84480-84499 | MS.gene013110:intron | 50.0% |
| !! | TGCCACATGTGAGTACCGAA+AGG | - | 21044:84159-84178 | MS.gene013110:intron | 50.0% |
| AGCCACCCTTCTGCAATGTG+TGG | + | 21044:84735-84754 | None:intergenic | 55.0% | |
| CGTGTCGTACCGTCGTATCA+CGG | + | 21044:82928-82947 | None:intergenic | 55.0% | |
| CTCCACACATTGCAGAAGGG+TGG | - | 21044:84730-84749 | MS.gene013110:intron | 55.0% | |
| GAAGCCAGTAAGGCAGTTGG+TGG | - | 21044:84520-84539 | MS.gene013110:intron | 55.0% | |
| GCCACGTAGAAGTGGGAGAT+AGG | + | 21044:84029-84048 | None:intergenic | 55.0% | |
| GCCTATCTCCCACTTCTACG+TGG | - | 21044:84025-84044 | MS.gene013110:CDS | 55.0% | |
| GCTCTATGAACTGGGGCTAG+TGG | - | 21044:84096-84115 | MS.gene013110:CDS | 55.0% | |
| GTATCACGGCGGTGAGAGAT+TGG | + | 21044:82914-82933 | None:intergenic | 55.0% | |
| TGGGAAGCCAGTAAGGCAGT+TGG | - | 21044:84517-84536 | MS.gene013110:intron | 55.0% | |
| TTCTTTGTGGCGGCCTCCAA+TGG | + | 21044:84867-84886 | None:intergenic | 55.0% | |
| CTCTCACCGCCGTGATACGA+CGG | - | 21044:82916-82935 | MS.gene013110:CDS | 60.0% | |
| GCGATATGGGGTTGCAGCAG+TGG | - | 21044:84273-84292 | MS.gene013110:intron | 60.0% | |
| GTCGTACCGTCGTATCACGG+CGG | + | 21044:82925-82944 | None:intergenic | 60.0% | |
| AGGAGGGAGTCTTGCGGCTG+TGG | - | 21044:84497-84516 | MS.gene013110:intron | 65.0% | |
| GCGGCTGTGGGAAGCCAGTA+AGG | - | 21044:84510-84529 | MS.gene013110:intron | 65.0% | |
| GGAGGGAGTCTTGCGGCTGT+GGG | - | 21044:84498-84517 | MS.gene013110:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21044 | gene | 82903 | 85119 | 82903 | ID=MS.gene013110 |
| 21044 | mRNA | 82903 | 85119 | 82903 | ID=MS.gene013110.t1;Parent=MS.gene013110 |
| 21044 | exon | 84790 | 85119 | 84790 | ID=MS.gene013110.t1.exon1;Parent=MS.gene013110.t1 |
| 21044 | CDS | 84790 | 85119 | 84790 | ID=cds.MS.gene013110.t1;Parent=MS.gene013110.t1 |
| 21044 | exon | 82903 | 84144 | 82903 | ID=MS.gene013110.t1.exon2;Parent=MS.gene013110.t1 |
| 21044 | CDS | 82903 | 84144 | 82903 | ID=cds.MS.gene013110.t1;Parent=MS.gene013110.t1 |
| Gene Sequence |
| Protein sequence |
